Pregenerated sensors for KDR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062960Ensembl transcript IDs: ENSMUST00000113516.2
Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTaGGTTTCTGTTCTGTTCTCACAATTCTTCGGCCCCGTCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TATRAATWVSTQQKP*VSVLFSQFFGPVRS Trigger: GCTCCTGACGGGGCCGAAGAATTGTGAGAACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR GCA 90 bp | CCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTaGGCCTTCCTTCCTCCCAGTCCACATCCCACACTTAACACTTGG | + |
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Preference number: 1 (lower is better) Translates to: PAQCICRLQPLSERA*AFLPPSPHPTLNTW Trigger: CCAAGTGTTAAGTGTGGGATGTGGACTGGGAGGAAGGAAGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 90 bp | GCTTGCGCCTTCCTTCCTCCCAGTCCACATCCCACACTTAACACTTaGCTCATAGCCCGCATCCTCCACAAAGCCTCCAAGGTAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: ACAFLPPSPHPTLNT*LIARILHKASKVDR Trigger: TCTGTCTACCTTGGAGGCTTTGTGGAGGATGCGGGCTATGAGCCAAGTGTTAAGTGTGGGATGTGGACTGGGAGGAAGGAAGGCGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR GCA 90 bp | GACTCGGCCCTGGGACATCTCACCCATCCTCAACACACAAAGCATTaGCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCCACTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: DSALGHLTHPQHTKH*PFDPVSQRCRCHFL Trigger: CAAGAAGTGGCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGGATGGGTGAGATGTCCCAGGGCCGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 90 bp | AATTCTTCGGCCCCGTCAGGAGCCTCTGCCGACGTTCCTCTCTTTTaGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGGAAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: NSSAPSGASADVPLF*CSELRHSLRDEEGA Trigger: TGCTCCTTCCTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGCAGAGGCTCCTGACGGGGCCGAAGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR TCA 90 bp | GAAAATCAAATGTGGCTACTTCCGGGTGGTGGAAAGAACAACACTTaGAAATCTAAGCAGCACCTCTCTCGTGATTTCCAGGAGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ENQMWLLPGGGKNNT*KSKQHLSRDFQELG Trigger: CCCCAACTCCTGGAAATCACGAGAGAGGTGCTGCTTAGATTTTCAAGTGTTGTTCTTTCCACCACCCGGAAGTAGCCACATTTGATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR TCA 90 bp | CTGGTAGTGAGACCACAGCAGGGCACATTATATAGGACTTTTAAATaGATGGAAAAGAGAGTAGAGTCAACACATTCTTGGGTCATGGGC | + |
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Preference number: 1 (lower is better) Translates to: LVVRPQQGTLYRTFK*MEKRVESTHSWVMG Trigger: GCCCATGACCCAAGAATGTGTTGACTCTACTCTCTTTTCCATTCATTTAAAAGTCCTATATAATGTGCCCTGCTGTGGTCTCACTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTGTGATTTCCAGGAGTTaGGGGCGGAGCCGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SQHNASAGSNRSPSELAPVISRS*GRSRDR Trigger: CCTGTCCCGGCTCCGCCCCCAACTCCTGGAAATCAC...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTCCAGAGCCAGCACAATaGATCTGCAGGCTCCAACCG | + |
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Preference number: 2 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPPEPAQ*ICRLQP Trigger: CGGTTGGAGCCTGCAGATGCATTGTGCTGGCTCTGG...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTGCAGCACCTCTCTCGTaGTTTCCAGGAGTTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PDCEEHANLPKPNPAGRLAAPLS*FPGVGG Trigger: GCCCCCAACTCCTGGAAATCACGAGAGAGGTGCTGC...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCCCAGTTTCACAGAGGTaGCGTTGCCACTTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TENPQTLPPGQPRGSPPSPVSQR*RCHFLE Trigger: CTCCAAGAAGTGGCAACGGCACCTCTGTGAAACTGG...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR TCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCCGCCTTTGCGTTTCCTaGCAGGCCACAAGCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: EHQPEPLPPLDREPSDTARLCVS*QATSPP Trigger: AGGTGGGCTTGTGGCCTGTCAGGAAACGCAAAGGCG...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR GCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTCCAGCACAATGCATCTaGAGGCTCCAACCGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFPAQCI*RLQPLS Trigger: GGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGG...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTGTGGCTACTTCCGGGTaGTGGAAAGAACAACACTTG | + |
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Preference number: 2 (lower is better) Translates to: SQHNASAGSNRSPSELAPVATSG*WKEQHL Trigger: CAAGTGTTGTTCTTTCCACCACCCGGAAGTAGCCAC...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCTCTCTTTTGGTGTTCTaGATTAAGGCACAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TENPQTLPPGQPRGSPPSSLLVF*IKAQPE Trigger: CTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGA...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR TCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTTCTCTGGAAATGCCCTaGGGACAAGCTCCTTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFSLEMP*GQAPCS Trigger: ACTGCAAGGAGCTTGTCCTCAGGGCATTTCCAGAGA...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGACCCAGCAGAAACCCTaGGTTTCTGTTCTGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PLPPLDREPSDTATRAATTQQKP*VSVLFS Trigger: TGAGAACAGAACAGAAACTCAGGGTTTCTGCTGGGT...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGCATCTTCTCTGGAAATaGCCTGAGGACAAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PLPPLDREPSDTATRAATHLLWK*PEDKLL Trigger: AAGGAGCTTGTCCTCAGGGCATTTCCAGAGAAGATG...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTCACATTCTTGGGTCATaGGCATCTTCTCTGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: SQHNASAGSNRSPSELAPHILGS*ASSLEM Trigger: CATTTCCAGAGAAGATGCCCATGACCCAAGAATGTG...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTCCCACACTTAACACTTaGCTCATAGCCCGCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: QGSHVGLHPAETLSFCSVPTLNT*LIARIL Trigger: GAGGATGCGGGCTATGAGCCAAGTGTTAAGTGTGGG...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCCATGGGCATCTTCTCTaGAAATGCCCTGAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: DCEEHANLPKPNPAGRLCHGHLL*KCPEDK Trigger: CTTGTCCTCAGGGCATTTCCAGAGAAGATGCCCATG...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTCAACACACAAAGCATTaGCCATTCGATCCAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PDCEEHANLPKPNPAGRLQHTKH*PFDPVS Trigger: TGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTG...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCTACTTCCGGGTGGTaGAAAGAACAACACTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFATSGW*KEQHLK Trigger: TTTCAAGTGTTGTTCTTTCCACCACCCGGAAGTAGC...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CAA 90 bp | TGGGTCATGGGCATCTTCTCTGGAAATGCCCTGAGGACAAGCTCCTaGCAGTCTGAGGTCCCTCCTCCAAAAATGAAAATCAAATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: WVMGIFSGNALRTSS*QSEVPPPKMKIKCG Trigger: GCCACATTTGATTTTCATTTTTGGAGGAGGGACCTCAGACTGCAAGGAGCTTGTCCTCAGGGCATTTCCAGAGAAGATGCCCATGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACCTCTCCGAGCGAGCTTaGGCCTTCCTTCCTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TFDEIIPPKNREQGHVEHLSERA*AFLPPS Trigger: ACTGGGAGGAAGGAAGGCGCAAGCTCGCTCGGAGAG...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACAATGAAAATCAAATGTaGCTACTTCCGGGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: TFDEIIPPKNREQGHVEHNENQM*LLPGGG Trigger: TCCACCACCCGGAAGTAGCCACATTTGATTTTCATT...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR TCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACGACAGAGCCACTGTTTaGAAGTCTTTTGCTTTAACT | + |
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Preference number: 2 (lower is better) Translates to: TFDEIIPPKNREQGHVEHDRATV*KSFALT Trigger: AGTTAAAGCAAAAGACTTTCAAACAGTGGCTCTGTC...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTCGTGATTTCCAGGAGTaGGGGGCGGAGCCGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: SQHNASAGSNRSPSELAPRDFQE*GAEPGQ Trigger: CTGTCCCGGCTCCGCCCCCAACTCCTGGAAATCACG...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR GCA 72 bp | TGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTaGGCCTTCCTTCCTCCCAGTCCACATCCCACACTT | + |
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Preference number: 3 (lower is better) Translates to: CICRLQPLSERA*AFLPPSPHPTL Trigger: AAGTGTGGGATGTGGACTGGGAGGAAGGAAGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CAA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCCGTTGCCACTTCTaGGAGGACAGAGCCACTGTT | + |
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Preference number: 3 (lower is better) Translates to: PDCEEHANLPKPNPAGRLCRCHF*EDRATV Trigger: AACAGTGGCTCTGTCCTCCAAGAAGTGGCAACGGCA...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR TCA 72 bp | AGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTaGGTTTCTGTTCTGTTCTCACAATTCTTCGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: RAATWVSTQQKP*VSVLFSQFFGP Trigger: GGGGCCGAAGAATTGTGAGAACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 72 bp | GAGATGAGGAAGGAGCAAGCTGCATCATTTCCTTCCTaGGGCCAGGCCAGGAGACACGTAAGAGTCCGGAAG | + |
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Preference number: 3 (lower is better) Translates to: EMRKEQAASFPS*GQARRHVRVRK Trigger: CTTCCGGACTCTTACGTGTCTCCTGGCCTGGCCCCAGGAAGGAAATGATGCAGCTTGCTCCTTCCTCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGGACAGAGCCACTGTTaGAAAGTCTTTTGCTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPGQSHC*KVFCFN Trigger: GTTAAAGCAAAAGACTTTCAAACAGTGGCTCTGTCC...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 72 bp | GCCCCGTCAGGAGCCTCTGCCGACGTTCCTCTCTTTTaGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: APSGASADVPLF*CSELRHSLRDE Trigger: CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGCAGAGGCTCCTGACGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR TCA 72 bp | ATTCTTGGGTCATGGGCATCTTCTCTGGAAATGCCCTaGGGACAAGCTCCTTGCAGTCTGAGGTCCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: ILGSWASSLEMP*GQAPCSLRSLL Trigger: GAGGAGGGACCTCAGACTGCAAGGAGCTTGTCCTCAGGGCATTTCCAGAGAAGATGCCCATGACCCAAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 72 bp | TTCCTTCCTCCCAGTCCACATCCCACACTTAACACTTaGCTCATAGCCCGCATCCTCCACAAAGCCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: FLPPSPHPTLNT*LIARILHKASK Trigger: CTTGGAGGCTTTGTGGAGGATGCGGGCTATGAGCCAAGTGTTAAGTGTGGGATGTGGACTGGGAGGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR GCA 72 bp | CTGGGACATCTCACCCATCCTCAACACACAAAGCATTaGCCATTCGATCCAGTTTCACAGAGGTGCCGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LGHLTHPQHTKH*PFDPVSQRCRC Trigger: GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGGATGGGTGAGATGTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR GCA 72 bp | ACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTaGCGTTGCCACTTCTTGGAGGACAGAGCCACTGTT | + |
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Preference number: 3 (lower is better) Translates to: TKHCPFDPVSQR*RCHFLEDRATV Trigger: AACAGTGGCTCTGTCCTCCAAGAAGTGGCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 72 bp | CCATCAGGAAGCCACAAAGCTAAAATACTGAGGACTTaGGGGCCTGACAGGAGTGGAGATAGAGGAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: PSGSHKAKILRT*GPDRSGDRGRT Trigger: TGTTCTTCCTCTATCTCCACTCCTGTCAGGCCCCCAAGTCCTCAGTATTTTAGCTTTGTGGCTTCCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR TCA 72 bp | CTCTGGAAATGCCCTGAGGACAAGCTCCTTGCAGTCTaGGGTCCCTCCTCCAAAAATGAAAATCAAATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LWKCPEDKLLAV*GPSSKNENQMW Trigger: CCACATTTGATTTTCATTTTTGGAGGAGGGACCTCAGACTGCAAGGAGCTTGTCCTCAGGGCATTTCCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR TCA 72 bp | ATGTGGCTACTTCCGGGTGGTGGAAAGAACAACACTTaGAAATCTAAGCAGCACCTCTCTCGTGATTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: MWLLPGGGKNNT*KSKQHLSRDFQ Trigger: CTGGAAATCACGAGAGAGGTGCTGCTTAGATTTTCAAGTGTTGTTCTTTCCACCACCCGGAAGTAGCCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CCA 72 bp | CTAAAAAGTAATTTCGAAATCTGGCTAGTGATTATCTaGAGAGCAAACCAACCAATTAAGATTTTTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LKSNFEIWLVII*RANQPIKIFLP Trigger: TGGCAGAAAAATCTTAATTGGTTGGTTTGCTCTCCAGATAATCACTAGCCAGATTTCGAAATTACTTTTTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTCCCCAACGTAGTCCTTaGCCTGGCGGAAGCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQHNASAGSNRSPSELAPPQRSP*PGGSVP Trigger: GGGCACGCTTCCGCCAGGGCAAGGACTACGTTGGGG...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTGCCCTCCCGGCTTGGTaGAGGCGCCTAGGAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLALPAW*RRLGGS Trigger: TGAACCTCCTAGGCGCCTGCACCAAGCCGGGAGGGC...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCTGGTTGGGGTCCTCATaGCAGCAGTCCAGCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSWLGSS*QQSSMV Trigger: GACCATGCTGGACTGCTGGCATGAGGACCCCAACCA...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGACCGATGTTGCCTGTaGGCCAAGCTTGTACCACGT | + |
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Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPDRCCL*AKLVPR Trigger: ACGTGGTACAAGCTTGGCTCACAGGCAACATCGGTC...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCCATACAGGAAACAGGTaGGGTAGGCAGGGAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSHTGNR*GRQGES Trigger: GGACTCTCCCTGCCTACCTCACCTGTTTCCTGTATG...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTGCGCAGTGTGGTCCCTaGGTCAGCGTGAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLAQCGP*VSVNCS Trigger: GCTGCAGTTCACGCTGACTCAGGGACCACACTGCGC...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| 3UTR CAA 72 bp | ATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTaGCGCCTTCCTTCCTCCCAGTCCACATCCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: MHLQAPTALRAS*RLPSSQSTSHT Trigger: AGTGTGGGATGTGGACTGGGAGGAAGGAAGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| 3UTR CAA 72 bp | CGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTaGCGTTTCCTGACAGGCCACAAGCCCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKPSKTKPCRPP*RFLTGHKPTST Trigger: GGTGGAGGTGGGCTTGTGGCCTGTCAGGAAACGCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTAGCTCTGGCTGCTGGTaGTGCTGTCCAAGCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQHNASAGSNRSPSELAPSSGCW*CCPSVF Trigger: AAAGACGCTTGGACAGCATCACCAGCAGCCAGAGCT...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGGTCCCTGAGTCAGCGTaGACTGCAGCATCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATVPESA*TAASTI Trigger: GATGGTGGATGCTGCAGTTCACGCTGACTCAGGGAC...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTCCTCAGAATCACGCTaGGCATTGGGCCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATSSESR*ALGQSQ Trigger: CTGGCTTTGGCCCAATGCTCAGCGTGATTCTGAGGA...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCTCTTGCAAACTGGTGTaGGTGATTCGCCCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSSCKLV*VIRPCG Trigger: TCCACATGGGCGAATCACTCACACCAGTTTGCAAGA...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTCTCCTCAACAAAGCCTaGGCTGGCAGAGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLLLNKA*AGRALA Trigger: AGCCAGAGCTCTGCCAGCTCAGGCTTTGTTGAGGAG...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTATTCTTCATCAATCTTaGCCCCAGGGTATGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPILHQS*PQGMGR Trigger: CCTCCCCATACCCTGGGGTCAAGATTGATGAAGAAT...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCGGTGTCTGTGTCATCTaGGTGATACCCAGACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSGVCVI*VIPRLV Trigger: TACCAGTCTGGGTATCACTCAGATGACACAGACACC...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTTTTGAAGGTGGAGAGTaGCAGGTGAAATCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPFEGGE*QVKSSP Trigger: GGGGCTTGATTTCACCTGGCACTCTCCACCTTCAAA...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTTGGGGAATTCCCACTTaGTGGCATCATAAGGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPWGIPT*WHHKAS Trigger: GCTTGCCTTATGATGCCAGCAAGTGGGAATTCCCCA...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGAATGTTTCGTGCTaGCAGGTCCCTGTGGATACA | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPENVSC*QVPVDT Trigger: TGTATCCACAGGGACCTGGCAGCACGAAACATTCTC...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTAGGCCACAGACTCCCTaGTTTTACTGGGCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPRPQTP*FYWASF Trigger: GAATGATGCCCAGTAAAAGCAGGGAGTCTGTGGCCT...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTAGCTGCCAGTACCACTaGATGTGGTGCAGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFSCQYH*MWCRGG Trigger: CCCTCCCCTGCACCACATCCAGTGGTACTGGCAGCT...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCCTTATGATGAGACTTTaGAGGTGGAGAGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSLMMRL*RWRVPG Trigger: ACCTGGCACTCTCCACCTTCAAAGTCTCATCATAAG...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCTCACATGGAAGGAGATaGCCCTCTCTCCTCGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCSHGRR*PSLLVP Trigger: CGGGACGAGGAGAGAGGGTCATCTCCTTCCATGTGA...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCATTCCACAATCACCATaGGAGGCCCTCCCGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCIPQSP*EALPAW Trigger: CCAAGCCGGGAGGGCCTCTCATGGTGATTGTGGAAT...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTGTGGATACACTTCCTTaGTGCCAAGAACTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQHNASAGSNRSPSELAPVDTLP*CQELHA Trigger: GGCATGGAGTTCTTGGCATCAAGGAAGTGTATCCAC...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTCCATGCCGGCATAGCTaGTCATGTAACTGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFPCRHS*SCNWGE Trigger: CTCTCCCCAGTTACATGATCAGCTATGCCGGCATGG...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTCAAGCTTGTACCACGTaGGGTTCTCAAACGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPQACTT*GSQTYF Trigger: GAAATACGTTTGAGAACCTCACGTGGTACAAGCTTG...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCTGCAGAGAGGCATTCTaGAATGCCACAATCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSCREAF*NATIKM Trigger: CATCTTGATTGTGGCATTTCAGAATGCCTCTCTGCA...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCGACCACACATCGCTCTaGATTGTGTATACTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSDHTSL*IVYTLS Trigger: TGACAGAGTATACACAATTCAGAGCGATGTGTGGTC...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCGACATGAGGGCTCGATaGTCGCTGTGTGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCDMRAR*SLCVAP Trigger: AGGAGCAACACACAGCGAGCATCGAGCCCTCATGTC...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGCAGTCCAGCATGGTCTaGTACATTTCTGGGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATQSSMV*YISGVV Trigger: CACTACCCCAGAAATGTACCAGACCATGCTGGACTG...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTTGTTTTTACACTCACTaGCCGGCTCTTTCGCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPCFYTH*PALSLT Trigger: AGTAAGCGAAAGAGCCGGCCAGTGAGTGTAAAAACA...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCACAATGCATCTGCAGGCTCCAACCGCTCTCCGAGCGAGCTTGCGCCTGACCGTGTAGTTTCCTaGATCTCTTTCAGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQHNASAGSNRSPSELAPDRVVS*ISFSHF Trigger: GAAGTGACTGAAAGAGATGCAGGAAACTACACGGTC...AGGCGCAAGCTCGCTCGGAGAGCGGTTGGAGCCTGCAGATGCATTGTGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCCTCACCGATCTGGGGTaGGACATTCACAACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EHQPEPLPPLDREPSDTALTDLG*DIHNQR Trigger: TCTCTGGTTGTGAATGTCCCACCCCAGATCGGTGAG...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGGACCCCTGATCACATaGAAGGAGATGACCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFGPLIT*KEMTLS Trigger: AGAGAGGGTCATCTCCTTCCATGTGATCAGGGGTCC...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGGAGCCAGAAGAACATaGCAATCACTGCAGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFGARRT*QSLQCR Trigger: TCGGCACTGCAGTGATTGCCATGTTCTTCTGGCTCC...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGGGAATTCCCACTTGCTaGCATCATAAGGCAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATGIPTC*HHKASV Trigger: AACGCTTGCCTTATGATGCCAGCAAGTGGGAATTCC...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCCGCTGGAGTACACGGTaGTGTCTGTGTCATCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCRWSTR*CLCHLS Trigger: ACTCAGATGACACAGACACCACCGTGTACTCCAGCG...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTCGTTGGCAGCTTGGATaGCCAGCGTACTTACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFRWQLG*PAYLQF Trigger: AAACTGTAAGTACGCTGGTCATCCAAGCTGCCAACG...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCGGAAGCTGTAACAGATaGGATGCTCCAAGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EHQPEPLPPLDREPSDTAGSCNR*DAPRSG Trigger: TCCTGACCTTGGAGCATCTCATCTGTTACAGCTTCC...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTATTTCTGTCTGCAGTaGACAACAGGGACACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATYFCLQ*TTGTHS Trigger: AGAGTGTGTCCCTGTTGTGCACTGCAGACAGAAATA...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGACCAGAGAGACCATGTaGCTCTGTTTCTCCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATTRETM*LCFSIE Trigger: TTCAATGGAGAAACAGAGCCACATGGTCTCTCTGGT...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTATCCCACTGTCTGTCTaGCTGTCATCTGGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFIPLSV*LSSGIT Trigger: AGTGATCCCAGATGACAGCCAGACAGACAGTGGGAT...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGACTCCCTGCTTTTACTaGGCATCATTCCACCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATTPCFY*ASFHQK Trigger: CTTTTGGTGGAATGATGCCCAGTAAAAGCAGGGAGT...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGGTCCTGCCTCGTCGCTaGAGTACACGGTGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDEVLPRR*STRWCL Trigger: CAGACACCACCGTGTACTCCAGCGACGAGGCAGGAC...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGCATATTGGTTTTTGGTaGCTTCGATCTTGTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATHIGFW*LRSCFP Trigger: GGGGAAACAAGATCGAAGTCACCAAAAACCAATATG...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTTCTCAGTACAATGCCTaGATCTTCTACCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSHVGLHPAETLSFCSVSQYNA*IFYQGL Trigger: GAGACCCTGGTAGAAGATTCAGGCATTGTACTGAGA...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTTCATCATTGATCTTTaGCTCACAGAAGACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATFIIDL*LTEDHA Trigger: GGCATGGTCTTCTGTGAGGCAAAGATCAATGATGAA...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCTTTCTATTGTCAAGGTaGTCAAAAACATCTTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TENPQTLPPGQPRGSPPSFLLSR*SKTSSP Trigger: TGGCGAAGATGTTTTTGAGCACCTTGACAATAGAAA...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTGGTAGGATTTCCAGATaGTGGGCAAGTCACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLGRISR*WASHFN Trigger: ATTGAAGTGACTTGCCCAGCATCTGGAAATCCTACC...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCCACAGCCAAGGACATTaGAGGCCTGGCAGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCHSQGH*RPGRCR Trigger: TCTACACCTGCCAGGCCTGCAATGTCCTTGGCTGTG...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCCATAGACATAAACAGTaGAGGCTATGTCGACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCHRHKQ*RLCRRP Trigger: GGGACGTCGACATAGCCTCCACTGTTTATGTCTATG...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTCAATGGTCTCGCCAATaGTTGTTGTCTGATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLQWSRQ*LLSDSP Trigger: TGGAGAATCAGACAACAACCATTGGCGAGACCATTG...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCCTTCCTCTACATCACTaGGCGATTTCTCCTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCLPLHH*AISPQQ Trigger: TTGTTGAGGAGAAATCGCTCAGTGATGTAGAGGAAG...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCAGGAGGTTTCCCAAATaGTCCACCAACTCTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EHQPEPLPPLDREPSDTARRFPK*STNSEN Trigger: GTTTTCAGAGTTGGTGGAGCATTTGGGAAACCTCCT...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGGGCAATGTCTTTTCTTaGTCTTCTTATCTTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATGNVFS*SSYLEQ Trigger: CTGCTCAAGATAAGAAGACCAAGAAAAGACATTGCC...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTAGGATTTCCAGATGCTaGGCAAGTCACTTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSHVGLHPAETLSFCSVRISRC*ASHFNG Trigger: ACCATTGAAGTGACTTGCCCAGCATCTGGAAATCCT...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGGCTGCCAGGTCCCTGTaGATACACTTCCTTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDEAARSL*IHFLDA Trigger: GGCATCAAGGAAGTGTATCCACAGGGACCTGGCAGC...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTTGTCTGGCTGTCATCTaGGATCACTTTTACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFCLAVI*DHFYFW Trigger: CCAGAAGTAAAAGTGATCCCAGATGACAGCCAGACA...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTGATAGGTTTCATCATTaGTCTTTGCCTCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLDRFHH*SLPHRR Trigger: TCTTCTGTGAGGCAAAGATCAATGATGAAACCTATC...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCCATTTCTGTACCATTTaGTATCAGGAGCTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: EHQPEPLPPLDREPSDTAHFCTI*YQELGN Trigger: GTTACCCAGCTCCTGATATCAAATGGTACAGAAATG...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGCGGTCCGTAGGACAATaGCAAGAAGGAGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDERSVGQ*QEGARR Trigger: TCTTCTGGCTCCTTCTTGTCATTGTCCTACGGACCG...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCATGCTCCACCAACTCTaGAAACGAGGGTCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCMLHQL*KRGSLV Trigger: AACCAGAGACCCTCGTTTTCAGAGTTGGTGGAGCAT...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR TCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCTCTGGAGATAATGACTaGTTCCTGCTGTGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCSGDND*FLLCCH Trigger: ATGACAACACAGCAGGAATCAGTCATTATCTCCAGA...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGAATCACGCTGAGCATTaGGCCAAAGCCAGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDENHAEH*AKASPG Trigger: ACCTGGACTGGCTTTGGCCCAATGCTCAGCGTGATT...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCATGTCAATGTCTGCATaGTCCCATACTGGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EHQPEPLPPLDREPSDTAMSMSA*SHTGRN Trigger: ATTCCTACCAGTATGGGACCATGCAGACATTGACAT...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTTGTCATAATGGAATTTaGGGTCGCACACTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSHVGLHPAETLSFCSVCHNGI*GRTLPL Trigger: AAGAGGAAGTGTGCGACCCCAAATTCCATTATGACA...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| 3UTR CAA 72 bp | GCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTaGCCACTTCTTGGAGGACAGAGCCACTGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPIRSSFTEVP*PLLGGQSHCLK Trigger: TTTCAAACAGTGGCTCTGTCCTCCAAGAAGTGGCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGCCACCCTGGGAATGGTaGGTGTTTTGCAGAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDEPPWEW*VFCRRY Trigger: GTATCTTCTGCAAAACACTCACCATTCCCAGGGTGG...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGGGAGGTTCACCACATTaGGATGGTGACCAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDEGGSPH*DGDQCG Trigger: TCCACATTGGTCACCATCTCAATGTGGTGAACCTCC...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTATAGGTTTCCAAACTTaGAGAATTCCACAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PDCEEHANLPKPNPAGRLIGFQT*RIPQSP Trigger: TGGTGATTGTGGAATTCTGCAAGTTTGGAAACCTAT...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGTGCTGCGCATTTGCTTaGAGGAGGTTTCCCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDECCAFA*RRFPKC Trigger: GCATTTGGGAAACCTCCTGCAAGCAAATGCGCAGCA...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCCTTGACTGCCCACTGTaGCTTCCACCAAAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCLDCPL*LPPKIS Trigger: TGAAATCTTTGGTGGAAGCCACAGTGGGCAGTCAAG...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCAAGTTGGTCTTTTCCTaGGCACCTTCTATTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHQPEPLPPLDREPSDTAKLVFS*APSIMK Trigger: CTTCATAATAGAAGGTGCCCAGGAAAAGACCAACTT...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTTCTGGTTCCTCCAATaGGATATCTTCAAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLDREPSDTATRAATFWFLQ*DIFKCF Trigger: AAAACATTTGAAGATATCCCATTGGAGGAACCAGAA...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGACATTTGTACAACGCTaGCACGTTGGCAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDETFVQR*HVGSLD Trigger: ATCCAAGCTGCCAACGTGTCAGCGTTGTACAAATGT...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR TCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGAGTTTTCAGCTCTTCTaGTGCAAGGACCATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDESFQLF*CKDHPT Trigger: AGTGGGATGGTCCTTGCATCAGAAGAGCTGAAAACT...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCAGAGGCATTCTGAAATaGCACAATCAAGATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: DCEEHANLPKPNPAGRLCRGILK*HNQDVI Trigger: AATGACATCTTGATTGTGGCATTTCAGAATGCCTCT...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCAATTCCAAAAGCGTCTaGCTCAATCACTTGGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCNSKSV*LNHLAE Trigger: TTCGGCCAAGTGATTGAGGCAGACGCTTTTGGAATT...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCCAGAATCCTCTTCCATaGTCAGTGTCTCTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCQNPLP*SVSLTL Trigger: CAATGTCAGAGACACTGAGCATGGAAGAGGATTCTG...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACACTCTCCTGCTCAGTTaGCTGGGCAGCAGGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHTLLLS*LGSRLH Trigger: GTGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGT...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACCAGACTGGTAGCCACTaGTCTGGTTGGAGCCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHQTGSH*SGWSLP Trigger: CGGAAGGCTCCAACCAGACCAGTGGCTACCAGTCTG...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGTTTGATATCAGGAGCTaGGTAACTGAGATACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDEFDIRS*VTEILH Trigger: GTGAAGTATCTCAGTTACCCAGCTCCTGATATCAAA...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGGATCACTTTTACTTCTaGTTCCTCCAATGGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: ADVPLFWCSELRHSLRDEDHFYF*FLQWDI Trigger: GATATCCCATTGGAGGAACCAGAAGTAAAAGTGATC...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACTCTTTGCCATCCTGCTaGGCATTTGCTTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHSLPSC*AFACRR Trigger: CCTCCTGCAAGCAAATGCGCAGCAGGATGGCAAAGA...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACTGTAGTTGGACTCAATaGGCCTTCCATTTCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHCSWTQ*AFHFCT Trigger: GGTACAGAAATGGAAGGCCCATTGAGTCCAACTACA...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACATACTCTGTCAAAAATaGTTTCCGGGGCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHILCQK*FPGPST Trigger: AGTGGATGGCCCCGGAAACCATTTTTGACAGAGTAT...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACTCAATCAGGGCATATTaGTTTTTGGTGACTTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHSIRAY*FLVTSI Trigger: GATCGAAGTCACCAAAAACCAATATGCCCTGATTGA...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR GCA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACCTGAAGGGTTGTATTTaGCAAAATTGTCAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TFDEIIPPKNREQGHVEHLKGCI*QNCQYV Trigger: GACATACTGACAATTTTGGCAAATACAACCCTTCAG...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCCACAGGGATTCGGACTaGACTGCCCACTGTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TENPQTLPPGQPRGSPPSHRDSD*TAHCGF Trigger: GAAGCCACAGTGGGCAGTCAAGTCCGAATCCCTGTG...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGCACTCTCCTGCTCAGTaGGCTGGGCAGCAGGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPPLDREPSDTATRAATHSPAQ*AGQQVA Trigger: TGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGTG...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTCATCCTGCTGCGCATTaGCTTGCAGGAGGTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPHPAAH*LAGGFP Trigger: TGGGAAACCTCCTGCAAGCAAATGCGCAGCAGGATG...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | CCACCGCCGCATTCAGTCACCAATACCCTTTCCTCAGAATCACGCTaGGCATTGGGCCAAAGCCAGTCCAGGTCCCGCTGTCCCCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPPHSVTNTLSSESR*ALGQSQSRSRCPLQ Trigger: TTGCAGGGGACAGCGGGACCTGGACTGGCTTTGGCCCAATGCTCAGCGTGATTCTGAGGAAAGGGTATTGGTGACTGAATGCGGCGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTCCTCGTCCCGCTTTGTaGATGGCTTCACATTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPPRPAL*MASHLY Trigger: GTACAAATGTGAAGCCATCAACAAAGCGGGACGAGG...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGCTGGGCAGCAGGTaGCACAGTAATTTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PLPPLDREPSDTATRAATWLGSR*HSNFRT Trigger: GGTCCTGAAATTACTGTGCAACCTGCTGCCCAGCCA...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGGGATCACCACAGTTTaGTTCTTGTTCTCGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPGITTV*FLFSVM Trigger: CATCACCGAGAACAAGAACAAAACTGTGGTGATCCC...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCTTGACGGCTACTGTTTaGCAAGTCGCTGTCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TENPQTLPPGQPRGSPPSLTATV*QVAVLS Trigger: TGACAAGACAGCGACTTGCAAAACAGTAGCCGTCAA...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | AAGTCCTGCCTCGTCGCTGGAGTACACGGTGGTGTCTGTGTCATCTaGGTGATACCCAGACTGGTAGCCACTGGTCTGGTTGGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSCLVAGVHGGVCVI*VIPRLVATGLVGAF Trigger: GAAGGCTCCAACCAGACCAGTGGCTACCAGTCTGGGTATCACTCAGATGACACAGACACCACCGTGTACTCCAGCGACGAGGCAGGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | CGGTGGTGTCTGTGTCATCTGAGTGATACCCAGACTGGTAGCCACTaGTCTGGTTGGAGCCTTCCGAGGCCACAGACTCCCTGCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RWCLCHLSDTQTGSH*SGWSLPRPQTPCFY Trigger: GTAAAAGCAGGGAGTCTGTGGCCTCGGAAGGCTCCAACCAGACCAGTGGCTACCAGTCTGGGTATCACTCAGATGACACAGACACCACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGGATGATGAGCTGTTaGACCAGGCAATGTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TENPQTLPPGQPRGSPPSRMMSC*TRQCLF Trigger: GAAAAGACATTGCCTGGTCAAACAGCTCATCATCCT...GCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGACACTGCCACCAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTTTGCAAGTCGCTGTCTaGTCAATTCCAAAAGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQTLPPGQPRGSPPSRNPLQVAV*SIPKAS Trigger: AGACGCTTTTGGAATTGACAAGACAGCGACTTGCAA...AGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTGGTGGCAGTGTCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGCATGCCCTTAGCCACTaGGAAGCTGTAACAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPLDREPSDTATRAATHALSH*EAVTDE Trigger: CTCATCTGTTACAGCTTCCAAGTGGCTAAGGGCATG...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | CTGCGCATTTGCTTGCAGGAGGTTTCCCAAATGCTCCACCAACTCTaGAAACGAGGGTCTCTGGTTGGGGTCCTCATGCCAGCAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRICLQEVSQMLHQL*KRGSLVGVLMPAVQ Trigger: CTGGACTGCTGGCATGAGGACCCCAACCAGAGACCCTCGTTTTCAGAGTTGGTGGAGCATTTGGGAAACCTCCTGCAAGCAAATGCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | CTGTCTGCAGTGCACAACAGGGACACACTCTCCTGCTCAGTTGGCTaGGCAGCAGGTTGCACAGTAATTTCAGGACCCCTGATCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAVHNRDTLSCSVG*AAGCTVISGPLITW Trigger: CCATGTGATCAGGGGTCCTGAAATTACTGTGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGTGTGTCCCTGTTGTGCACTGCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | CTGTGTCATCTGAGTGATACCCAGACTGGTAGCCACTGGTCTGGTTaGAGCCTTCCGAGGCCACAGACTCCCTGCTTTTACTGGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LCHLSDTQTGSHWSG*SLPRPQTPCFYWAS Trigger: TGATGCCCAGTAAAAGCAGGGAGTCTGTGGCCTCGGAAGGCTCCAACCAGACCAGTGGCTACCAGTCTGGGTATCACTCAGATGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTTCTCCTCGTCCCGCTTaGTTGATGGCTTCACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSHVGLHPAETLSFCSVSPRPA*LMASHL Trigger: CAAATGTGAAGCCATCAACAAAGCGGGACGAGGAGA...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCACCAGGGCAGCCACGATAATGACTTCCAAGTaGGTCTTTTCCTGGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PLPPLDREPSDTATRAATIMTSK*VFSWAP Trigger: AGGTGCCCAGGAAAAGACCAACTTGGAAGTCATTAT...CGTGGCTGCCCTGGTGGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | CGCCCATGTGGACCGATGTTGCCTGTGAGCCAAGCTTGTACCACGTaGGGTTCTCAAACGTATTTCTGTCTGCAGTGCACAACAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RPCGPMLPVSQACTT*GSQTYFCLQCTTGT Trigger: TGTCCCTGTTGTGCACTGCAGACAGAAATACGTTTGAGAACCTCACGTGGTACAAGCTTGGCTCACAGGCAACATCGGTCCACATGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | CATCCACCATCTTTAAAAGTCCTGCCTCGTCGCTGGAGTACACGGTaGTGTCTGTGTCATCTGAGTGATACCCAGACTGGTAGCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPPSLKVLPRRWSTR*CLCHLSDTQTGSHW Trigger: CCAGTGGCTACCAGTCTGGGTATCACTCAGATGACACAGACACCACCGTGTACTCCAGCGACGAGGCAGGACTTTTAAAGATGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCAAATCAAGCCCCACATaGAGCTCTGTTCTCGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EHQPEPLPPLDREPSDTAKSSPT*SSVLAV Trigger: TACAGCGAGAACAGAGCTCAATGTGGGGCTTGATTT...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTTCTTATGATGAGACTTaGAAGGTGGAGAGTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSHVGLHPAETLSFCSVSYDET*KVESAR Trigger: CCTGGCACTCTCCACCTTCAAAGTCTCATCATAAGA...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCTCCCCTTGGTCACTCTaGGTCACACTTTCTATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DCEEHANLPKPNPAGRLCSPWSL*VTLSIV Trigger: GACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGA...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCGATGCTCGCTGTGTGTaGCTCCTTCTTTCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: DCEEHANLPKPNPAGRLCDARCV*LLLSTS Trigger: AGATGTTGAAAGAAGGAGCAACACACAGCGAGCATC...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GAACACCAGCCTGAGCCTTTACCGCCACTTGACAGAGAACCCTCAGACACTGCCATGTGGATGAGGATCTaGAGTTCAGACATGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EHQPEPLPPLDREPSDTAMWMRI*SSDMRA Trigger: AGCCCTCATGTCTGAACTCAAGATCCTCATCCACAT...GGCAGTGTCTGAGGGTTCTCTGTCAAGTGGCGGTAAAGGCTCAGGCTGGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCCCCGTAAGTAAGTaGATAGGTTTCCAAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PDCEEHANLPKPNPAGRLCPVSK*IGFQTC Trigger: GCAAGTTTGGAAACCTATCAACTTACTTACGGGGCA...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCTGTGGATACACTTCCTaGATGCCAAGAACTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DCEEHANLPKPNPAGRLCCGYTS*MPRTPC Trigger: GCATGGAGTTCTTGGCATCAAGGAAGTGTATCCACA...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | GAATTTGGGGTCGCACACTTCCTCTTCCTCCATACAGGAAACAGGTaGGGTAGGCAGGGAGAGTCCAGAATCCTCTTCCATGCTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EFGVAHFLFLHTGNR*GRQGESRILFHAQC Trigger: ACACTGAGCATGGAAGAGGATTCTGGACTCTCCCTGCCTACCTCACCTGTTTCCTGTATGGAGGAAGAGGAAGTGTGCGACCCCAAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 90 bp | TCAAACGTATTTCTGTCTGCAGTGCACAACAGGGACACACTCTCCTaGTCAGTTGGCTGGGCAGCAGGTTGCACAGTAATTTCAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SNVFLSAVHNRDTLS*SVGWAAGCTVISGP Trigger: GGGTCCTGAAATTACTGTGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGTGTGTCCCTGTTGTGCACTGCAGACAGAAATACGTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | AGAGCATCCAAGTTCTTGCAAACTGGTGTGAGTGATTCGCCCATGTaGACCGATGTTGCCTGTGAGCCAAGCTTGTACCACGTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RASKFLQTGVSDSPM*TDVACEPSLYHVRF Trigger: GAACCTCACGTGGTACAAGCTTGGCTCACAGGCAACATCGGTCCACATGGGCGAATCACTCACACCAGTTTGCAAGAACTTGGATGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | CGTGAACTGCAGCATCCACCATCTTTAAAAGTCCTGCCTCGTCGCTaGAGTACACGGTGGTGTCTGTGTCATCTGAGTGATACCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RELQHPPSLKVLPRR*STRWCLCHLSDTQT Trigger: AGTCTGGGTATCACTCAGATGACACAGACACCACCGTGTACTCCAGCGACGAGGCAGGACTTTTAAAGATGGTGGATGCTGCAGTTCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCGGAATGGTGAGTGTTTaGCAGAAGATACTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DCEEHANLPKPNPAGRLCGMVSV*QKILSP Trigger: TGGTGACAGTATCTTCTGCAAAACACTCACCATTCC...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGGCCTGTGAGCCAAGCTaGTACCACGTGAGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ADVPLFWCSELRHSLRDEACEPS*YHVRFS Trigger: TGAGAACCTCACGTGGTACAAGCTTGGCTCACAGGC...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTAGAGCATCCAAGTTCTaGCAAACTGGTGTGAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGSHVGLHPAETLSFCSVRASKF*QTGVSD Trigger: ATCACTCACACCAGTTTGCAAGAACTTGGATGCTCT...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTGATAGGTTTCCAAACTaGCAGAATTCCACAATCACC | + |
|
Preference number: 5 (lower is better) Translates to: PDCEEHANLPKPNPAGRLDRFPN*QNSTIT Trigger: GGTGATTGTGGAATTCTGCAAGTTTGGAAACCTATC...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | GACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGCAAGGTCAGGAAGTCCTaGTACAGTTCTTCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DCEEHANLPKPNPAGRLCKVRKS*YSSSEA Trigger: AGCTTCTGAAGAACTGTACAAGGACTTCCTGACCTT...GCAAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCCTGCTGCGCATTTGCTaGCAGGAGGTTTCCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCLLRIC*QEVSQM Trigger: CATTTGGGAAACCTCCTGCAAGCAAATGCGCAGCAG...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS GCA 90 bp | GGTAGCCACTGGTCTGGTTGGAGCCTTCCGAGGCCACAGACTCCCTaGTTTTACTGGGCATCATTCCACCAAAAGATGGAGATAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSHWSGWSLPRPQTP*FYWASFHQKMEIIC Trigger: ACAAATTATCTCCATCTTTTGGTGGAATGATGCCCAGTAAAAGCAGGGAGTCTGTGGCCTCGGAAGGCTCCAACCAGACCAGTGGCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTGGTCACACTTTCTATaGTCAAGGTGCTCAAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PDCEEHANLPKPNPAGRLWSHFL*SRCSKT Trigger: TGTTTTTGAGCACCTTGACAATAGAAAGTGTGACCA...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTTCTTGGTCTTCTTATCTaGAGCAGAGCAAACATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTVKSTQTFQNQTLPAAFLGLLI*SRANIV Trigger: GACTATGTTTGCTCTGCTCAAGATAAGAAGACCAAG...AAAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 90 bp | AGCACTTGTAGGCTCCAGTATCATTTCCAACCACCCTGGGAATGGTaGGTGTTTTGCAGAAGATACTGTCACCACCGCCGCATTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: STCRLQYHFQPPWEW*VFCRRYCHHRRIQS Trigger: TGACTGAATGCGGCGGTGGTGACAGTATCTTCTGCAAAACACTCACCATTCCCAGGGTGGTTGGAAATGATACTGGAGCCTACAAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | TGCCATTCAGTTTCCAAAGAGCATCCAAGTTCTTGCAAACTGGTGTaGGTGATTCGCCCATGTGGACCGATGTTGCCTGTGAGCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CHSVSKEHPSSCKLV*VIRPCGPMLPVSQA Trigger: AGCTTGGCTCACAGGCAACATCGGTCCACATGGGCGAATCACTCACACCAGTTTGCAAGAACTTGGATGCTCTTTGGAAACTGAATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS-3UTR CAA 90 bp | CCCGACTGTGAAGAGCACGCAAACCTTCCAAAACCAAACCCTGCCGGCCGCCTTAAAGATGGAGATAATTaGTTCCTGTCTTCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PDCEEHANLPKPNPAGRLKDGDN*FLSSRV Trigger: AACTCTGGAAGACAGGAACAAATTATCTCCATCTTT...AAGGCGGCCGGCAGGGTTTGGTTTTGGAAGGTTTGCGTGCTCTTCACAGTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 90 bp | CTCTCCTCGTCCCGCTTTGTTGATGGCTTCACATTTGTACAACGCTaGCACGTTGGCAGCTTGGATGACCAGCGTACTTACAGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRFVDGFTFVQR*HVGSLDDQRTYSFV Trigger: AACAAAACTGTAAGTACGCTGGTCATCCAAGCTGCCAACGTGTCAGCGTTGTACAAATGTGAAGCCATCAACAAAGCGGGACGAGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | CCTGCGGATAGTCAGGTTCCGGTTCCCATCTCTCAGTACAATGCCTaGATCTTCTACCAGGGTCTCGTTGTCTTTGAACCATGTAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: PADSQVPVPISQYNA*IFYQGLVVFEPCNV Trigger: CACATTACATGGTTCAAAGACAACGAGACCCTGGTAGAAGATTCAGGCATTGTACTGAGAGATGGGAACCGGAACCTGACTATCCGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | GGTAGGCAGGGAGAGTCCAGAATCCTCTTCCATGCTCAGTGTCTCTaGCATTGGAAGAACAATATAGTCTTTGCCATCCTGCTGCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRQGESRILFHAQCL*HWKNNIVFAILLRI Trigger: AATGCGCAGCAGGATGGCAAAGACTATATTGTTCTTCCAATGTCAGAGACACTGAGCATGGAAGAGGATTCTGGACTCTCCCTGCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | TCCGTCCACTGGACGCTACACAGGTGTATTCCCCTTGGTCACTCTTaGTCACACTTTCTATTGTCAAGGTGCTCAAAAACATCTTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVHWTLHRCIPLGHS*SHFLLSRCSKTSSP Trigger: TGGCGAAGATGTTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCAGTGGACGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | GGACTCAATGGGCCTTCCATTTCTGTACCATTTGATATCAGGAGCTaGGTAACTGAGATACTTCACAGGGATTCGGACTTGACTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLNGPSISVPFDIRS*VTEILHRDSDLTAH Trigger: GTGGGCAGTCAAGTCCGAATCCCTGTGAAGTATCTCAGTTACCCAGCTCCTGATATCAAATGGTACAGAAATGGAAGGCCCATTGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGCCACGTGGGTCTCCACCCAGCAGAAACCCTGAGTTTCTGTTCTGTTTCTGAAGGGTTGTATTaGCCAAAATTGTCAGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: QGSHVGLHPAETLSFCSVSEGLY*PKLSVC Trigger: ACATACTGACAATTTTGGCAAATACAACCCTTCAGA...AACAGAACAGAAACTCAGGGTTTCTGCTGGGTGGAGACCCACGTGGCTGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | CTCTTGATCATCCGTCCACTGGACGCTACACAGGTGTATTCCCCTTaGTCACTCTTGGTCACACTTTCTATTGTCAAGGTGCTCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLIIRPLDATQVYSP*SLLVTLSIVKVLKN Trigger: GTTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCAGTGGACGGATGATCAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 90 bp | ATCATAAGGCAAGCGTTCACAGCGCTCATCCAAGGGCAATTCATCTaGATCCATGACAATAGACAAGTAGCCTGTCTTCAGTTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IIRQAFTALIQGQFI*IHDNRQVACLQFPF Trigger: GAAGGGGAACTGAAGACAGGCTACTTGTCTATTGTCATGGATCCAGATGAATTGCCCTTGGATGAGCGCTGTGAACGCTTGCCTTATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAACACACAAAGCATTGCCCATTCGATCCAGTTTCACAGAGGTGCCGTTGCAATGTTCTATTTCTCTaGATCATCCGTCCACTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PQHTKHCPFDPVSQRCRCNVLFL*IIRPLD Trigger: GTCCAGTGGACGGATGATCAAGAGAAATAGAACATT...GCAACGGCACCTCTGTGAAACTGGATCGAATGGGCAATGCTTTGTGTGTTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | GCCGACGTTCCTCTCTTTTGGTGTTCTGAATTAAGGCACAGCCTGAGAGATGAGTCTCGCCAATGGTTGTaGTCTGATTCTCCAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADVPLFWCSELRHSLRDESRQWL*SDSPDF Trigger: GAAATCTGGAGAATCAGACAACAACCATTGGCGAGA...CTCATCTCTCAGGCTGTGCCTTAATTCAGAACACCAAAAGAGAGGAACGTCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 90 bp | AAAGGGTTTCACATCCCGGTTTACAATCTTCTTATGATGAGACTTTaGAGGTGGAGAGTGCCAGGTGAAATCAAGCCCCACATTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGFHIPVYNLLMMRL*RWRVPGEIKPHIEL Trigger: GAGCTCAATGTGGGGCTTGATTTCACCTGGCACTCTCCACCTTCAAAGTCTCATCATAAGAAGATTGTAAACCGGGATGTGAAACCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS GCA 90 bp | GGAAGCGTGCCCCTTTGCTCTTATAGGGAACAAATTCATTTCTCTTaGCCCGTAAGTAAGTTGATAGGTTTCCAAACTTGCAGAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSVPLCSYREQIHFS*PVSKLIGFQTCRIP Trigger: TGGAATTCTGCAAGTTTGGAAACCTATCAACTTACTTACGGGGCAAGAGAAATGAATTTGTTCCCTATAAGAGCAAAGGGGCACGCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACACCACAGTTTTGTTCTaGTTCTCGGTGATGTACACG | + |
|
Preference number: 5 (lower is better) Translates to: TFDEIIPPKNREQGHVEHTTVLF*FSVMYT Trigger: CGTGTACATCACCGAGAACAAGAACAAAACTGTGGT...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS-3UTR CAA 90 bp | ACATTTGATGAAATCATTCCTCCTAAGAACAGAGAACAAGGACACGTAGAACACTCAGTGTCTCTGACATaGGAAGAACAATATAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TFDEIIPPKNREQGHVEHSVSLT*EEQYSL Trigger: AAGACTATATTGTTCTTCCAATGTCAGAGACACTGA...GTGTTCTACGTGTCCTTGTTCTCTGTTCTTAGGAGGAATGATTTCATCAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | TCACCAATACCCTTTCCTCAGAATCACGCTGAGCATTaGGCCAAAGCCAGTCCAGGTCCCGCTGTCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPIPFPQNHAEH*AKASPGPAVPC Trigger: GCAGGGGACAGCGGGACCTGGACTGGCTTTGGCCCAATGCTCAGCGTGATTCTGAGGAAAGGGTATTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | GCTGCCAGTACCACTGGATGTGGTGCAGGGGAGGGTTaGCGTAGACTGTGCATGTCAATGTCTGCATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AASTTGCGAGEG*RRLCMSMSAWS Trigger: GGACCATGCAGACATTGACATGCACAGTCTACGCCAACCCTCCCCTGCACCACATCCAGTGGTACTGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | CTGTGTCATCTGAGTGATACCCAGACTGGTAGCCACTaGTCTGGTTGGAGCCTTCCGAGGCCACAGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LCHLSDTQTGSH*SGWSLPRPQTP Trigger: GGGAGTCTGTGGCCTCGGAAGGCTCCAACCAGACCAGTGGCTACCAGTCTGGGTATCACTCAGATGACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | GTGCACAACAGGGACACACTCTCCTGCTCAGTTGGCTaGGCAGCAGGTTGCACAGTAATTTCAGGACCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VHNRDTLSCSVG*AAGCTVISGPL Trigger: CAGGGGTCCTGAAATTACTGTGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGTGTGTCCCTGTTGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | CTGAGTGATACCCAGACTGGTAGCCACTGGTCTGGTTaGAGCCTTCCGAGGCCACAGACTCCCTGCTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LSDTQTGSHWSG*SLPRPQTPCFY Trigger: GTAAAAGCAGGGAGTCTGTGGCCTCGGAAGGCTCCAACCAGACCAGTGGCTACCAGTCTGGGTATCACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | CTCGTCGCTGGAGTACACGGTGGTGTCTGTGTCATCTaGGTGATACCCAGACTGGTAGCCACTGGTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LVAGVHGGVCVI*VIPRLVATGLV Trigger: AACCAGACCAGTGGCTACCAGTCTGGGTATCACTCAGATGACACAGACACCACCGTGTACTCCAGCGACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 72 bp | ACAGGAGGTGAGCGCAGTGTGGTCCCTGAGTCAGCGTaGACTGCAGCATCCACCATCTTTAAAAGTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGGERSVVPESA*TAASTIFKSPA Trigger: GGCAGGACTTTTAAAGATGGTGGATGCTGCAGTTCACGCTGACTCAGGGACCACACTGCGCTCACCTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS GCA 72 bp | ACTGGATGTGGTGCAGGGGAGGGTTGGCGTAGACTGTaGATGTCAATGTCTGCATGGTCCCATACTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: TGCGAGEGWRRL*MSMSAWSHTGR Trigger: CCTACCAGTATGGGACCATGCAGACATTGACATGCACAGTCTACGCCAACCCTCCCCTGCACCACATCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 72 bp | CATTCAGTCACCAATACCCTTTCCTCAGAATCACGCTaGGCATTGGGCCAAAGCCAGTCCAGGTCCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSVTNTLSSESR*ALGQSQSRSRC Trigger: ACAGCGGGACCTGGACTGGCTTTGGCCCAATGCTCAGCGTGATTCTGAGGAAAGGGTATTGGTGACTGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS GCA 72 bp | TTTGCAAGTCGCTGTCTTGTCAATTCCAAAAGCGTCTaGCTCAATCACTTGGCCGAAGGCACCGCGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FASRCLVNSKSV*LNHLAEGTAAK Trigger: CTTGGCCGCGGTGCCTTCGGCCAAGTGATTGAGGCAGACGCTTTTGGAATTGACAAGACAGCGACTTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | CATAGGCGAGATCAAGGCTTTCTCACCGATCTGGGGTaGGACATTCACAACCAGAGAGACCATGTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HRRDQGFLTDLG*DIHNQRDHVAL Trigger: CAGAGCCACATGGTCTCTCTGGTTGTGAATGTCCCACCCCAGATCGGTGAGAAAGCCTTGATCTCGCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 90 bp | CCTGGAAATCCTCCACGTGTCTCCATTCTTTACAAGCATACGGGCTaGTTTGGCCGGGTCTGTAGGAGCAGGCTTCTTCTAGCTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PGNPPRVSILYKHTG*FGRVCRSRLLLAAS Trigger: ACTGGCAGCTAGAAGAAGCCTGCTCCTACAGACCCGGCCAAACAAGCCCGTATGCTTGTAAAGAATGGAGACACGTGGAGGATTTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | AGGCTCCAGTATCATTTCCAACCACCCTGGGAATGGTaGGTGTTTTGCAGAAGATACTGTCACCACCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RLQYHFQPPWEW*VFCRRYCHHRR Trigger: GCGGCGGTGGTGACAGTATCTTCTGCAAAACACTCACCATTCCCAGGGTGGTTGGAAATGATACTGGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS GCA 72 bp | TTTCTGTCTGCAGTGCACAACAGGGACACACTCTCCTaGTCAGTTGGCTGGGCAGCAGGTTGCACAGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: FLSAVHNRDTLS*SVGWAAGCTVI Trigger: AATTACTGTGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGTGTGTCCCTGTTGTGCACTGCAGACAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS GCA 72 bp | GAGCTCCCCAACGTAGTCCTTGCCCTGGCGGAAGCGTaGCCCTTTGCTCTTATAGGGAACAAATTCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELPNVVLALAEA*PFALIGNKFIS Trigger: AGAAATGAATTTGTTCCCTATAAGAGCAAAGGGGCACGCTTCCGCCAGGGCAAGGACTACGTTGGGGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 72 bp | ATCGACCCTCGGCAGGGGATCACCACAGTTTTGTTCTaGTTCTCGGTGATGTACACGATGCCATGCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: IDPRQGITTVLF*FSVMYTMPCWS Trigger: TGACCAGCATGGCATCGTGTACATCACCGAGAACAAGAACAAAACTGTGGTGATCCCCTGCCGAGGGTCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 72 bp | CTCTCTCCTCGTCCCGCTTTGTTGATGGCTTCACATTaGTACAACGCTGACACGTTGGCAGCTTGGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSPRPALLMASH*YNADTLAAWMT Trigger: GGTCATCCAAGCTGCCAACGTGTCAGCGTTGTACAAATGTGAAGCCATCAACAAAGCGGGACGAGGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 90 bp | AGGTTTGAAATCGACCCTCGGCAGGGGATCACCACAGTTTTGTTCTaGTTCTCGGTGATGTACACGATGCCATGCTGGTCACTGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RFEIDPRQGITTVLF*FSVMYTMPCWSLTE Trigger: CTCTGTCAGTGACCAGCATGGCATCGTGTACATCACCGAGAACAAGAACAAAACTGTGGTGATCCCCTGCCGAGGGTCGATTTCAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | AAGTTCTTGCAAACTGGTGTGAGTGATTCGCCCATGTaGACCGATGTTGCCTGTGAGCCAAGCTTGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: KFLQTGVSDSPM*TDVACEPSLYH Trigger: GTGGTACAAGCTTGGCTCACAGGCAACATCGGTCCACATGGGCGAATCACTCACACCAGTTTGCAAGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | TCTTTAAAAGTCCTGCCTCGTCGCTGGAGTACACGGTaGTGTCTGTGTCATCTGAGTGATACCCAGACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLKVLPRRWSTR*CLCHLSDTQTG Trigger: ACCAGTCTGGGTATCACTCAGATGACACAGACACCACCGTGTACTCCAGCGACGAGGCAGGACTTTTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | CAGCATCCACCATCTTTAAAAGTCCTGCCTCGTCGCTaGAGTACACGGTGGTGTCTGTGTCATCTGAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QHPPSLKVLPRR*STRWCLCHLSD Trigger: ATCACTCAGATGACACAGACACCACCGTGTACTCCAGCGACGAGGCAGGACTTTTAAAGATGGTGGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | TGGAAGGAGATGACCCTCTCTCCTCGTCCCGCTTTGTaGATGGCTTCACATTTGTACAACGCTGACACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WKEMTLSPRPAL*MASHLYNADTL Trigger: CAACGTGTCAGCGTTGTACAAATGTGAAGCCATCAACAAAGCGGGACGAGGAGAGAGGGTCATCTCCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | ACATGGAAGGAGATGACCCTCTCTCCTCGTCCCGCTTaGTTGATGGCTTCACATTTGTACAACGCTGACACG | + |
|
Preference number: 6 (lower is better) Translates to: TWKEMTLSPRPA*LMASHLYNADT Trigger: CGTGTCAGCGTTGTACAAATGTGAAGCCATCAACAAAGCGGGACGAGGAGAGAGGGTCATCTCCTTCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | TCGCCCATGTGGACCGATGTTGCCTGTGAGCCAAGCTaGTACCACGTGAGGTTCTCAAACGTATTTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPMWTDVACEPS*YHVRFSNVFLS Trigger: AGACAGAAATACGTTTGAGAACCTCACGTGGTACAAGCTTGGCTCACAGGCAACATCGGTCCACATGGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 90 bp | ACATTGAGGTTTGAAATCGACCCTCGGCAGGGGATCACCACAGTTTaGTTCTTGTTCTCGGTGATGTACACGATGCCATGCTGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TLRFEIDPRQGITTV*FLFSVMYTMPCWSL Trigger: CAGTGACCAGCATGGCATCGTGTACATCACCGAGAACAAGAACAAAACTGTGGTGATCCCCTGCCGAGGGTCGATTTCAAACCTCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | TCCCGCTTTGTTGATGGCTTCACATTTGTACAACGCTaGCACGTTGGCAGCTTGGATGACCAGCGTACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SRFVDGFTFVQR*HVGSLDDQRTY Trigger: GTAAGTACGCTGGTCATCCAAGCTGCCAACGTGTCAGCGTTGTACAAATGTGAAGCCATCAACAAAGCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | GTTTCCAAAGAGCATCCAAGTTCTTGCAAACTGGTGTaGGTGATTCGCCCATGTGGACCGATGTTGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSKEHPSSCKLV*VIRPCGPMLPV Trigger: CACAGGCAACATCGGTCCACATGGGCGAATCACTCACACCAGTTTGCAAGAACTTGGATGCTCTTTGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 72 bp | CTTGTACCACGTGAGGTTCTCAAACGTATTTCTGTCTaGAGTGCACAACAGGGACACACTCTCCTGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LVPREVLKRISV*SAQQGHTLLLS Trigger: ACTGAGCAGGAGAGTGTGTCCCTGTTGTGCACTGCAGACAGAAATACGTTTGAGAACCTCACGTGGTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | ATCCGTCCACTGGACGCTACACAGGTGTATTCCCCTTaGTCACTCTTGGTCACACTTTCTATTGTCAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IRPLDATQVYSP*SLLVTLSIVKV Trigger: CACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCAGTGGACGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | GATACTTCACAGGGATTCGGACTTGACTGCCCACTGTaGCTTCCACCAAAGATTTCATCCCACTACCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: DTSQGFGLDCPL*LPPKISSHYRK Trigger: CTTTCGGTAGTGGGATGAAATCTTTGGTGGAAGCCACAGTGGGCAGTCAAGTCCGAATCCCTGTGAAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | TTTGAAATCGACCCTCGGCAGGGGATCACCACAGTTTaGTTCTTGTTCTCGGTGATGTACACGATGCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: FEIDPRQGITTV*FLFSVMYTMPC Trigger: GCATGGCATCGTGTACATCACCGAGAACAAGAACAAAACTGTGGTGATCCCCTGCCGAGGGTCGATTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 90 bp | ATCCGTCCACTGGACGCTACACAGGTGTATTCCCCTTGGTCACTCTaGGTCACACTTTCTATTGTCAAGGTGCTCAAAAACATCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: IRPLDATQVYSPWSL*VTLSIVKVLKNIFA Trigger: GGCGAAGATGTTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCAGTGGACGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 90 bp | AACATGGCAATCACTGCAGTGCCGACGAGGATAATGACTTCCAAGTaGGTCTTTTCCTGGGCACCTTCTATTATGAAGAGCGTCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: NMAITAVPTRIMTSK*VFSWAPSIMKSVSA Trigger: AGCGGAGACGCTCTTCATAATAGAAGGTGCCCAGGAAAAGACCAACTTGGAAGTCATTATCCTCGTCGGCACTGCAGTGATTGCCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | AGCCAGTCCAGGTCCCGCTGTCCCCTGCAAGTAATCTaGAGGGTTGTATTTGCCAAAATTGTCAGTATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQSRSRCPLQVI*RVVFAKIVSMS Trigger: AGACATACTGACAATTTTGGCAAATACAACCCTTCAGATTACTTGCAGGGGACAGCGGGACCTGGACTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | TTCTGGATACCTAGCGCAAAGAGACACATTGAGGTTTaGAATCGACCCTCGGCAGGGGATCACCACAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FWIPSAKRHIEV*NRPSAGDHHSF Trigger: AAAACTGTGGTGATCCCCTGCCGAGGGTCGATTTCAAACCTCAATGTGTCTCTTTGCGCTAGGTATCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS TCA 72 bp | AGTCAGGTTCCGGTTCCCATCTCTCAGTACAATGCCTaGATCTTCTACCAGGGTCTCGTTGTCTTTGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SQVPVPISQYNA*IFYQGLVVFEP Trigger: TGGTTCAAAGACAACGAGACCCTGGTAGAAGATTCAGGCATTGTACTGAGAGATGGGAACCGGAACCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 72 bp | GTTTTGTTCTTGTTCTCGGTGATGTACACGATGCCATaGTGGTCACTGACAGAGGCGATGAATGGTGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLFLFSVMYTMP*WSLTEAMNGDL Trigger: CAGATCACCATTCATCGCCTCTGTCAGTGACCAGCATGGCATCGTGTACATCACCGAGAACAAGAACAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | GAACCATGTAATGTGTGGGGTAGGATTTCCAGATGCTaGGCAAGTCACTTCAATGGTCTCGCCAATGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EPCNVWGRISRC*ASHFNGLANGC Trigger: ACAACCATTGGCGAGACCATTGAAGTGACTTGCCCAGCATCTGGAAATCCTACCCCACACATTACATGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | TACCAGGGTCTCGTTGTCTTTGAACCATGTAATGTGTaGGGTAGGATTTCCAGATGCTGGGCAAGTCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: YQGLVVFEPCNV*GRISRCWASHF Trigger: GAAGTGACTTGCCCAGCATCTGGAAATCCTACCCCACACATTACATGGTTCAAAGACAACGAGACCCTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | CAAGCGTTCACAGCGCTCATCCAAGGGCAATTCATCTaGATCCATGACAATAGACAAGTAGCCTGTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QAFTALIQGQFI*IHDNRQVACLQ Trigger: CTGAAGACAGGCTACTTGTCTATTGTCATGGATCCAGATGAATTGCCCTTGGATGAGCGCTGTGAACGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CCA 72 bp | TGGAGCCTTCCGAGGCCACAGACTCCCTGCTTTTACTaGGCATCATTCCACCAAAAGATGGAGATAATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WSLPRPQTPCFY*ASFHQKMEIIC Trigger: ACAAATTATCTCCATCTTTTGGTGGAATGATGCCCAGTAAAAGCAGGGAGTCTGTGGCCTCGGAAGGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 72 bp | AATCTCTTTTCTGGATACCTAGCGCAAAGAGACACATaGAGGTTTGAAATCGACCCTCGGCAGGGGATCACC | + |
|
Preference number: 6 (lower is better) Translates to: NLFSGYLAQRDT*RFEIDPRQGIT Trigger: GGTGATCCCCTGCCGAGGGTCGATTTCAAACCTCAATGTGTCTCTTTGCGCTAGGTATCCAGAAAAGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 72 bp | AGCTGGGTAACTGAGATACTTCACAGGGATTCGGACTaGACTGCCCACTGTGGCTTCCACCAAAGATTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SWVTEILHRDSD*TAHCGFHQRFH Trigger: ATGAAATCTTTGGTGGAAGCCACAGTGGGCAGTCAAGTCCGAATCCCTGTGAAGTATCTCAGTTACCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 72 bp | ATGGTGCCATTCAGTTTCCAAAGAGCATCCAAGTTCTaGCAAACTGGTGTGAGTGATTCGCCCATGTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: MVPFSFQRASKF*QTGVSDSPMWT Trigger: GGTCCACATGGGCGAATCACTCACACCAGTTTGCAAGAACTTGGATGCTCTTTGGAAACTGAATGGCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 90 bp | GCAGGGAGAGTCCAGAATCCTCTTCCATGCTCAGTGTCTCTGACATaGGAAGAACAATATAGTCTTTGCCATCCTGCTGCGCATTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGRVQNPLPCSVSLT*EEQYSLCHPAAHLL Trigger: AAGCAAATGCGCAGCAGGATGGCAAAGACTATATTGTTCTTCCAATGTCAGAGACACTGAGCATGGAAGAGGATTCTGGACTCTCCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 90 bp | TCTCTTGATCATCCGTCCACTGGACGCTACACAGGTGTATTCCCCTaGGTCACTCTTGGTCACACTTTCTATTGTCAAGGTGCTCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLDHPSTGRYTGVFP*VTLGHTFYCQGAQK Trigger: TTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCAGTGGACGGATGATCAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 90 bp | TTAGAAAACATGGTGCCATTCAGTTTCCAAAGAGCATCCAAGTTCTaGCAAACTGGTGTGAGTGATTCGCCCATGTGGACCGATGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LENMVPFSFQRASKF*QTGVSDSPMWTDVA Trigger: GGCAACATCGGTCCACATGGGCGAATCACTCACACCAGTTTGCAAGAACTTGGATGCTCTTTGGAAACTGAATGGCACCATGTTTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 90 bp | GATGAGCTGTTTGACCAGGCAATGTCTTTTCTTGGTCTTCTTATCTaGAGCAGAGCAAACATAGTCGCCTTGGTCCTGCAGAGAGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: DELFDQAMSFLGLLI*SRANIVALVLQRGI Trigger: AATGCCTCTCTGCAGGACCAAGGCGACTATGTTTGCTCTGCTCAAGATAAGAAGACCAAGAAAAGACATTGCCTGGTCAAACAGCTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
||
| CDS CAA 90 bp | TCTCTCAGTACAATGCCTGAATCTTCTACCAGGGTCTCGTTGTCTTaGAACCATGTAATGTGTGGGGTAGGATTTCCAGATGCTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SLSTMPESSTRVSLS*NHVMCGVGFPDAGQ Trigger: TTGCCCAGCATCTGGAAATCCTACCCCACACATTACATGGTTCAAAGACAACGAGACCCTGGTAGAAGATTCAGGCATTGTACTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 72 bp | CTTGGTCACTCTTGGTCACACTTTCTATTGTCAAGGTaGTCAAAAACATCTTCGCCACAGTCCCAGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LGHSWSHFLLSR*SKTSSPQSQER Trigger: CCTTTCCTGGGACTGTGGCGAAGATGTTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 72 bp | AATGACAAGAAGGAGCCAGAAGAACATGGCAATCACTaGAGTGCCGACGAGGATAATGACTTCCAAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: NDKKEPEEHGNH*SADEDNDFQVG Trigger: ACCAACTTGGAAGTCATTATCCTCGTCGGCACTGCAGTGATTGCCATGTTCTTCTGGCTCCTTCTTGTCATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | ATGGTGATCTGTAATCTCGAACATAGACATAAACAGTaGAGGCTATGTCGACGTCCCGGTACGAGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: MVICNLEHRHKQ*RLCRRPGTSTC Trigger: ACAAGTGCTCGTACCGGGACGTCGACATAGCCTCCACTGTTTATGTCTATGTTCGAGATTACAGATCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | GGGCCTTCCATTTCTGTACCATTTGATATCAGGAGCTaGGTAACTGAGATACTTCACAGGGATTCGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: GPSISVPFDIRS*VTEILHRDSDL Trigger: CAAGTCCGAATCCCTGTGAAGTATCTCAGTTACCCAGCTCCTGATATCAAATGGTACAGAAATGGAAGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | CTGGACGCTACACAGGTGTATTCCCCTTGGTCACTCTaGGTCACACTTTCTATTGTCAAGGTGCTCAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LDATQVYSPWSL*VTLSIVKVLKN Trigger: GTTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | ATCACTGCAGTGCCGACGAGGATAATGACTTCCAAGTaGGTCTTTTCCTGGGCACCTTCTATTATGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ITAVPTRIMTSK*VFSWAPSIMKS Trigger: GCTCTTCATAATAGAAGGTGCCCAGGAAAAGACCAACTTGGAAGTCATTATCCTCGTCGGCACTGCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 90 bp | TTCCCATCTCTCAGTACAATGCCTGAATCTTCTACCAGGGTCTCGTaGTCTTTGAACCATGTAATGTGTGGGGTAGGATTTCCAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: FPSLSTMPESSTRVS*SLNHVMCGVGFPDA Trigger: AGCATCTGGAAATCCTACCCCACACATTACATGGTTCAAAGACAACGAGACCCTGGTAGAAGATTCAGGCATTGTACTGAGAGATGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS TCA 72 bp | GATGCCATGCTGGTCACTGACAGAGGCGATGAATGGTaGTCTGTAATCTCGAACATAGACATAAACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: DAMLVTDRGDEW*SVISNIDINSG Trigger: TCCACTGTTTATGTCTATGTTCGAGATTACAGATCACCATTCATCGCCTCTGTCAGTGACCAGCATGGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 72 bp | TCAGTGTCTCTGACATTGGAAGAACAATATAGTCTTTaGCATCCTGCTGCGCATTTGCTTGCAGGAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVSLTLEEQYSL*HPAAHLLAGGF Trigger: GAAACCTCCTGCAAGCAAATGCGCAGCAGGATGGCAAAGACTATATTGTTCTTCCAATGTCAGAGACACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | TGGACGCTACACAGGTGTATTCCCCTTGGTCACTCTTaGTCACACTTTCTATTGTCAAGGTGCTCAAAAACA | + |
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Preference number: 6 (lower is better) Translates to: WTLHRCIPLGHS*SHFLLSRCSKT Trigger: TGTTTTTGAGCACCTTGACAATAGAAAGTGTGACCAAGAGTGACCAAGGGGAATACACCTGTGTAGCGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | TTGTTGATGGCTTCACATTTGTACAACGCTGACACGTaGGCAGCTTGGATGACCAGCGTACTTACAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLMASHLYNADT*AAWMTSVLTVL Trigger: CAAAACTGTAAGTACGCTGGTCATCCAAGCTGCCAACGTGTCAGCGTTGTACAAATGTGAAGCCATCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 90 bp | TCTTTTCTTGGTCTTCTTATCTTGAGCAGAGCAAACATAGTCGCCTaGGTCCTGCAGAGAGGCATTCTGAAATGCCACAATCAAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: SFLGLLILSRANIVA*VLQRGILKCHNQDV Trigger: GACATCTTGATTGTGGCATTTCAGAATGCCTCTCTGCAGGACCAAGGCGACTATGTTTGCTCTGCTCAAGATAAGAAGACCAAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | CTCAGTACAATGCCTGAATCTTCTACCAGGGTCTCGTaGTCTTTGAACCATGTAATGTGTGGGGTAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: LSTMPESSTRVS*SLNHVMCGVGF Trigger: AAATCCTACCCCACACATTACATGGTTCAAAGACAACGAGACCCTGGTAGAAGATTCAGGCATTGTACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS GCA 72 bp | CCCCTTTGCTCTTATAGGGAACAAATTCATTTCTCTTaGCCCGTAAGTAAGTTGATAGGTTTCCAAACTTGC | + |
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Preference number: 6 (lower is better) Translates to: PLCSYREQIHFS*PVSKLIGFQTC Trigger: GCAAGTTTGGAAACCTATCAACTTACTTACGGGGCAAGAGAAATGAATTTGTTCCCTATAAGAGCAAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CCA 72 bp | GTCTGTCTGGCTGTCATCTGGGATCACTTTTACTTCTaGTTCCTCCAATGGGATATCTTCAAATGTTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: VCLAVIWDHFYF*FLQWDIFKCFY Trigger: GTAAAAACATTTGAAGATATCCCATTGGAGGAACCAGAAGTAAAAGTGATCCCAGATGACAGCCAGACAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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| CDS CAA 72 bp | AGGGAACAAATTCATTTCTCTTGCCCCGTAAGTAAGTaGATAGGTTTCCAAACTTGCAGAATTCCACAATCA | + |
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Preference number: 6 (lower is better) Translates to: REQIHFSCPVSK*IGFQTCRIPQS Trigger: TGATTGTGGAATTCTGCAAGTTTGGAAACCTATCAACTTACTTACGGGGCAAGAGAAATGAATTTGTTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113516.2 |
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