Pregenerated sensors for KDM8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030752Ensembl transcript IDs: ENSMUST00000033010.9, ENSMUST00000135129.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCCACACGTGGGTACATAGCAGCTCTGTCACACAACAGACATTaGCTGGGGGCAGGGCTGCTGGAGTCTAGCGGCATGCAGGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: WATRGYIAALSHNRH*LGAGLLESSGMQGP Trigger: TGGGCCCTGCATGCCGCTAGACTCCAGCAGCCCTGCCCCCAGCCAATGTCTGTTGTGTGACAGAGCTGCTATGTACCCACGTGTGGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 90 bp | GCTCTGCCCTACACACGCGGGCACACACAGCAGGTGGGCCACACGTaGGTACATAGCAGCTCTGTCACACAACAGACATTGGCTGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: ALPYTRGHTQQVGHT*VHSSSVTQQTLAGG Trigger: GCCCCCAGCCAATGTCTGTTGTGTGACAGAGCTGCTATGTACCCACGTGTGGCCCACCTGCTGTGTGTGCCCGCGTGTGTAGGGCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR TCA 90 bp | GGAGCCAAGGACCTCTGTTTCCAACTCCTAGTAGTAAGCTGGCAGTaGGGCCTGGGTACACAGAAGACTGGGACCACAGCAGCTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GAKDLCFQLLVVSWQ*GLGTQKTGTTAAVP Trigger: TGGGACAGCTGCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGGAGTTGGAAACAGAGGTCCTTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 90 bp | ACTCCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTaGGACCACAGCAGCTGTCCCAGACCCGGCTATATTCCACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: TPSSKLAVRPGYTED*DHSSCPRPGYIPPK Trigger: CTTGGGTGGAATATAGCCGGGTCTGGGACAGCTGCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 90 bp | TATTACAGGTTGTGTTCTGTCTCTGAGCAGCTTGCCAGCTGCCCTTaGGCACCTAGCAGCAAGGGATACTCAGCCCAGCAGTTACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: YYRLCSVSEQLASCP*APSSKGYSAQQLQR Trigger: CCTTTGTAACTGCTGGGCTGAGTATCCCTTGCTGCTAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAGAACACAACCTGTAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR TCA 90 bp | GCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACTCCTTaGTTCACCCTGAGTAAGGTGTGTGCATGCACATCCGCCATCAAC | + |
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Preference number: 1 (lower is better) Translates to: ASLPGQSFPQEVFTP*FTLSKVCACTSAIN Trigger: GTTGATGGCGGATGTGCATGCACACACCTTACTCAGGGTGAATCAAGGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 90 bp | GTATCTAAGTGGGCCCCGAGTGTTCAGCCAATGAGCTTCCCTTCCTaGGCAGTCCTTCCCACAAGAGGTATTTACTCCTTGATTCACCCT | + |
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Preference number: 1 (lower is better) Translates to: VSKWAPSVQPMSFPS*AVLPTRGIYSLIHP Trigger: AGGGTGAATCAAGGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTGAACACTCGGGGCCCACTTAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR TCA 90 bp | TCCATGGTAATGTGGTATCTAAGTGGGCCCCGAGTGTTCAGCCAATaGGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACT | + |
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Preference number: 1 (lower is better) Translates to: SMVMWYLSGPRVFSQ*ASLPGQSFPQEVFT Trigger: AGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTGAACACTCGGGGCCCACTTAGATACCACATTACCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR TCA 90 bp | GCCAGCTCCCTGCCAAACTACCTGATCTGGAACATGACACCCCACTaGGAGGACGGTGACAGTCAGTCTTGTAACATAAAAACCTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: ASSLPNYLIWNMTPH*EDGDSQSCNIKTWS Trigger: ACTCCAGGTTTTTATGTTACAAGACTGACTGTCACCGTCCTCTCAGTGGGGTGTCATGTTCCAGATCAGGTAGTTTGGCAGGGAGCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGTACACAGAAGACTGGGACCACAGCAGCTGTCCCAGACCCGGCTATATTCACACAACAGACATTaGCTGGGGGCAGGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AWVHRRLGPQQLSQTRLYSHNRH*LGAGLL Trigger: CAGCAGCCCTGCCCCCAGCCAATGTCTGTTGTGTGA...ATATAGCCGGGTCTGGGACAGCTGCTGTGGTCCCAGTCTTCTGTGTACCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGTACACAGAAGACTGGGACCACAGCAGCTGTCCCAGACCCGGCTATATGGCACACACAGCAGGTaGGCCACACGTGGGTACATA | + |
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Preference number: 2 (lower is better) Translates to: AWVHRRLGPQQLSQTRLYGTHSR*ATRGYI Trigger: TATGTACCCACGTGTGGCCCACCTGCTGTGTGTGCC...ATATAGCCGGGTCTGGGACAGCTGCTGTGGTCCCAGTCTTCTGTGTACCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACTCCCCTCCTCTTCCAGCCTaGTGCATAAGTGCCCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: QPMSFPSWAVLPTRGIYSPPLPA*CISAPR Trigger: CCTCGGGGCACTTATGCACCAGGCTGGAAGAGGAGG...GGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CAA 90 bp | CCCAAGAAAACCCCTATTACAGGTTGTGTTCTGTCTCTGAGCAGCTaGCCAGCTGCCCTTGGGCACCTAGCAGCAAGGGATACTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PKKTPITGCVLSLSS*PAALGHLAARDTQP Trigger: GGGCTGAGTATCCCTTGCTGCTAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAGAACACAACCTGTAATAGGGGTTTTCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCCCCGAGGGGAAGTATGGAGCCAAGGACCTCTGTTTCCAACTCCTAGTAGCTGGCAGTGAGGCCTaGGTACACAGAAGACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: KCPEGKYGAKDLCFQLLVAGSEA*VHRRLG Trigger: TCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGC...TACTAGGAGTTGGAAACAGAGGTCCTTGGCTCCATACTTCCCCTCGGGGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CAA 90 bp | TCCCAGACCCGGCTATATTCCACCCAAGAAAACCCCTATTACAGGTaGTGTTCTGTCTCTGAGCAGCTTGCCAGCTGCCCTTGGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: SQTRLYSTQENPYYR*CSVSEQLASCPWAP Trigger: AGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAGAACACAACCTGTAATAGGGGTTTTCTTGGGTGGAATATAGCCGGGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACTCCTTCATCAAGGAGGCTTaGGGGCAGGGGCTTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: QPMSFPSWAVLPTRGIYSFIKEA*GQGLPC Trigger: ACAAGGAAGCCCCTGCCCCCAAGCCTCCTTGATGAA...GGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR GCA 72 bp | CTCTGTCACACAACAGACATTGGCTGGGGGCAGGGCTaGTGGAGTCTAGCGGCATGCAGGGCCCACACTGAC | + |
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Preference number: 3 (lower is better) Translates to: LCHTTDIGWGQG*WSLAACRAHTD Trigger: GTCAGTGTGGGCCCTGCATGCCGCTAGACTCCAGCAGCCCTGCCCCCAGCCAATGTCTGTTGTGTGACAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 72 bp | CAGCTCTGCCCTACACACGCGGGCACACACAGCAGGTaGGCCACACGTGGGTACATAGCAGCTCTGTCACAC | + |
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Preference number: 3 (lower is better) Translates to: QLCPTHAGTHSR*ATRGYIAALSH Trigger: GTGTGACAGAGCTGCTATGTACCCACGTGTGGCCCACCTGCTGTGTGTGCCCGCGTGTGTAGGGCAGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR GCA 72 bp | GTTCCGCTGCCCTCCTCTTCCAGCCTGGTGCATAAGTaGCCCGAGGGGAAGTATGGAGCCAAGGACCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VPLPSSSSLVHK*PEGKYGAKDLC Trigger: ACAGAGGTCCTTGGCTCCATACTTCCCCTCGGGGCACTTATGCACCAGGCTGGAAGAGGAGGGCAGCGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR GCA 72 bp | ATTGGCTGGGGGCAGGGCTGCTGGAGTCTAGCGGCATaGAGGGCCCACACTGACACTTGGTTTACTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: IGWGQGCWSLAA*RAHTDTWFTAF Trigger: AAAGGCAGTAAACCAAGTGTCAGTGTGGGCCCTGCATGCCGCTAGACTCCAGCAGCCCTGCCCCCAGCCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 72 bp | CGTGGGTACATAGCAGCTCTGTCACACAACAGACATTaGCTGGGGGCAGGGCTGCTGGAGTCTAGCGGCATG | + |
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Preference number: 3 (lower is better) Translates to: RGYIAALSHNRH*LGAGLLESSGM Trigger: CATGCCGCTAGACTCCAGCAGCCCTGCCCCCAGCCAATGTCTGTTGTGTGACAGAGCTGCTATGTACCCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CAA 90 bp | GAAGACTGGGACCACAGCAGCTGTCCCAGACCCGGCTATATTCCACCCAAGAAACTGTCTCTGAGCAGCTaGCCAGCTGCCCTTGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: EDWDHSSCPRPGYIPPKKLSLSS*PAALGH Trigger: GTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAG...TTTCTTGGGTGGAATATAGCCGGGTCTGGGACAGCTGCTGTGGTCCCAGTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 72 bp | TTGTGTTCTGTCTCTGAGCAGCTTGCCAGCTGCCCTTaGGCACCTAGCAGCAAGGGATACTCAGCCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LCSVSEQLASCP*APSSKGYSAQQ Trigger: CTGCTGGGCTGAGTATCCCTTGCTGCTAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAGAACACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACTCCGTCACACAACAGACATaGGCTGGGGGCAGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QPMSFPSWAVLPTRGIYSVTQQT*AGGRAA Trigger: AGCAGCCCTGCCCCCAGCCAATGTCTGTTGTGTGAC...GGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 72 bp | TACACACGCGGGCACACACAGCAGGTGGGCCACACGTaGGTACATAGCAGCTCTGTCACACAACAGACATTG | + |
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Preference number: 3 (lower is better) Translates to: YTRGHTQQVGHT*VHSSSVTQQTL Trigger: CAATGTCTGTTGTGTGACAGAGCTGCTATGTACCCACGTGTGGCCCACCTGCTGTGTGTGCCCGCGTGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR TCA 72 bp | ATGTGGTATCTAAGTGGGCCCCGAGTGTTCAGCCAATaGGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: MWYLSGPRVFSQ*ASLPGQSFPQE Trigger: CTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTGAACACTCGGGGCCCACTTAGATACCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 72 bp | TGGGCCCCGAGTGTTCAGCCAATGAGCTTCCCTTCCTaGGCAGTCCTTCCCACAAGAGGTATTTACTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: WAPSVQPMSFPS*AVLPTRGIYSL Trigger: CAAGGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTGAACACTCGGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR-3UTR CAA 90 bp | CCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACCACAGCAACCCCTATTACAGGTaGTGTTCTGTCTCTGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: PSSKLAVRPGYTEDWDHSNPYYR*CSVSEQ Trigger: CTGCTCAGAGACAGAACACAACCTGTAATAGGGGTT...GCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| 3UTR CCA 72 bp | GGCTCAGACTGGGGAAATCTCAGAATTGAGAACAGCTaGAGTAGAGCCAGCTCCCTGCCAAACTACCTGATC | + |
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Preference number: 3 (lower is better) Translates to: GSDWGNLRIENS*SRASSLPNYLI Trigger: GATCAGGTAGTTTGGCAGGGAGCTGGCTCTACTCCAGCTGTTCTCAATTCTGAGATTTCCCCAGTCTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | TGGACCGGGCCACCAGACAGAAGAACTGGTAAGGTTGAGCAGGCTCAGACTGGGCTAGGACGGCCTCACTaGCCTGCAGGCACCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WTGPPDRRTGKVEQAQTGLGRPH*PAGTPA Trigger: GGCAGGGGTGCCTGCAGGCCAGTGAGGCCGTCCTAG...CCCAGTCTGAGCCTGCTCAACCTTACCAGTTCTTCTGTCTGGTGGCCCGGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | GTGGGCCACACGTGGGTACATAGCAGCTCTGTCACACAACAGACATTGGCTGGGGGGCCGCGGGCAGGCTaGTTTCCTGGGAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VGHTWVHSSSVTQQTLAGGPRAG*FPGSWC Trigger: ACACCAGCTCCCAGGAAAGCAGCCTGCCCGCGGCCC...CCCAGCCAATGTCTGTTGTGTGACAGAGCTGCTATGTACCCACGTGTGGCCCAC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | CACAACAGACATTGGCTGGGGGCAGGGCTGCTGGAGTCTAGCGGCATGCAGGGCGACTCCACTTCTTCATaGACGGCCAGTGGTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HNRHWLGAGLLESSGMQGDSTSS*TASGRP Trigger: TGGCCGACCACTGGCCGTGCATGAAGAAGTGGAGTC...GCCCTGCATGCCGCTAGACTCCAGCAGCCCTGCCCCCAGCCAATGTCTGTTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | CCAGCCTGGTGCATAAGTGCCCCGAGGGGAAGTATGGAGCCAAGGACCTCTGTTAGTGGCCTTCTGTGGTaGCTGGCACAGGCACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PAWCISAPRGSMEPRTSVSGLLW*LAQAQG Trigger: GCCCTGTGCCTGTGCCAGGCACCACAGAAGGCCACT...AACAGAGGTCCTTGGCTCCATACTTCCCCTCGGGGCACTTATGCACCAGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGCAGCTTGCCAGCTGCCCTTGGGCACCTAGCAGCAAGGGATACTCAGCTTCCACGGGGACGGTaGGGCAGCCAGCAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLSSLPAALGHLAARDTQLPRGR*GSQQSP Trigger: AGGAGATTGCTGGCTGCCGCACCGTCCCCGTGGAAG...CTGAGTATCCCTTGCTGCTAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | TGGACCGGGCCACCAGACAGAAGAACTGGTAAGGTTGAGCAGGCTCAGACTGGGTGCTGCTTGAAGTACTaGAGAGGTGGGCAGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: WTGPPDRRTGKVEQAQTGCCLKY*RGGQRS Trigger: GCTCCGCTGCCCACCTCTGCAGTACTTCAAGCAGCA...CCCAGTCTGAGCCTGCTCAACCTTACCAGTTCTTCTGTCTGGTGGCCCGGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | ATTACAGGTTGTGTTCTGTCTCTGAGCAGCTTGCCAGCTGCCCTTGGGCACCTACCTTCCAGAGGGTGCTaGACCCCACCAGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ITGCVLSLSSLPAALGHLPSRGC*TPPGAL Trigger: CAGAGCCCCTGGTGGGGTCCAGCACCCTCTGGAAGG...TAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAGAACACAACCTGTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CACAACAAAGTAGTTCCGCTGCCCTCCTCTTCCAGCCTGGTGCATAAGTGCCCCGGCAGGCTGCTTTCCTaGGAGCTGGTGTGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HNKVVPLPSSSSLVHKCPGRLLS*ELVCLE Trigger: CTCCAGACACACCAGCTCCCAGGAAAGCAGCCTGCC...GGGGCACTTATGCACCAGGCTGGAAGAGGAGGGCAGCGGAACTACTTTGTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR TCA 90 bp | TCTAAGTGGGCCCCGAGTGTTCAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTTCGAAGAGCTGGTGCTaGGCAAGGTACCCGACATCC | + |
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Preference number: 4 (lower is better) Translates to: SKWAPSVQPMSFPSWAVLSKSWC*ARYPTS Trigger: GGATGTCGGGTACCTTGCTCAGCACCAGCTCTTCGA...AAGGACTGCCCAGGAAGGGAAGCTCATTGGCTGAACACTCGGGGCCCACTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | TGGACCGGGCCACCAGACAGAAGAACTGGTAAGGTTGAGCAGGCTCAGACTGGGGATGCAGTGGGGAGATaGTGCCTTGTGGACCAAACC | + |
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Preference number: 4 (lower is better) Translates to: WTGPPDRRTGKVEQAQTGDAVGR*CLVDQT Trigger: GGTTTGGTCCACAAGGCACCATCTCCCCACTGCATC...CCCAGTCTGAGCCTGCTCAACCTTACCAGTTCTTCTGTCTGGTGGCCCGGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CCAACTCCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACGGGGTCCTGATGCAGTaGGGAGATGGTGCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PTPSSKLAVRPGYTEDWDGVLMQ*GDGALW Trigger: CCACAAGGCACCATCTCCCCACTGCATCAGGACCCC...GTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGGAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACCACAGCACTTTGCCTTCTTGGTaGCAGGCTGATCCTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PSSKLAVRPGYTEDWDHSTLPSW*QADPGG Trigger: CCCACCAGGATCAGCCTGCCACCAAGAAGGCAAAGT...GCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | GGCTCAGACTGGGGAAATCTCAGAATTGAGAACAGCTGGAGTAGAGCCAGCTCCGAAGTACTGCAGAGGTaGGCAGCGGAGCCTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GSDWGNLRIENSWSRASSEVLQR*AAEPGY Trigger: GTACCCAGGCTCCGCTGCCCACCTCTGCAGTACTTC...GGAGCTGGCTCTACTCCAGCTGTTCTCAATTCTGAGATTTCCCCAGTCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACCACAGCATGACCACCAGAAGCTaGCAGAGAAGCTCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSKLAVRPGYTEDWDHSMTTRS*QRSSGP Trigger: TGGACCTGAGCTTCTCTGTCAGCTTCTGGTGGTCAT...GCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | TCTCTGAGCAGCTTGCCAGCTGCCCTTGGGCACCTAGCAGCAAGGGATACTCAGGTACCCGACATCCTTTaGCTCGCTCAGGATGAACTT | + |
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Preference number: 4 (lower is better) Translates to: SLSSLPAALGHLAARDTQVPDIL*LAQDEL Trigger: AAGTTCATCCTGAGCGAGGCAAAGGATGTCGGGTAC...CTGAGTATCCCTTGCTGCTAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | ATTACAGGTTGTGTTCTGTCTCTGAGCAGCTTGCCAGCTGCCCTTGGGCACCTAGCAGTGGGGAGATGGTaGCTTGTGGACCAAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ITGCVLSLSSLPAALGHLAVGRW*LVDQTR Trigger: CCTGGTTTGGTCCACAAGGCACCATCTCCCCACTGC...TAGGTGCCCAAGGGCAGCTGGCAAGCTGCTCAGAGACAGAACACAACCTGTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACTCCAGTAGTGGCCTTCTGTaGTGCCTGGCACAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: QPMSFPSWAVLPTRGIYSSSGLL*CLAQAQ Trigger: CTGTGCCTGTGCCAGGCACCACAGAAGGCCACTACT...GGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | AATCTGGATAGCTTAGGTACATGTAGCAGCTCTGCCCTACACACGCGGGCACACGAATGTCCTCGAGGATaGCTGCCCCCATCAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: NLDSLGTCSSSALHTRAHECPRG*LPPSTG Trigger: GCCTGTTGATGGGGGCAGCCATCCTCGAGGACATTC...GTGTGCCCGCGTGTGTAGGGCAGAGCTGCTACATGTACCTAAGCTATCCAGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACCACAGCCACACTTTGCCTTCTTaGTGGCAGGCTGATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSSKLAVRPGYTEDWDHSHTLPS*WQADPG Trigger: ACCAGGATCAGCCTGCCACCAAGAAGGCAAAGTGTG...GCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | AATCTGGATAGCTTAGGTACATGTAGCAGCTCTGCCCTACACACGCGGGCACACTTCATGCACGGCCAGTaGTCGGCCACACCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLDSLGTCSSSALHTRAHFMHGQ*SATPSK Trigger: CTTGGAAGGTGTGGCCGACCACTGGCCGTGCATGAA...GTGTGCCCGCGTGTGTAGGGCAGAGCTGCTACATGTACCTAAGCTATCCAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGGTGCATAAGTGCCCCGAGGGGAAGTATGGAGCCAAGGACCTCTGTTGGAGATGGTGCCTTGTaGACCAAACCAGGCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAWCISAPRGSMEPRTSVGDGAL*TKPGID Trigger: ATCAATGCCTGGTTTGGTCCACAAGGCACCATCTCC...AACAGAGGTCCTTGGCTCCATACTTCCCCTCGGGGCACTTATGCACCAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | GTAAGAACCATCTCTTCATCAAGGAGGCTTGGGGGCAGGGGCTTCCTTGTAAAAGCTGGCGTCACACTTTaGCTTCTTGGTGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRTISSSRRLGGRGFLVKAGVTL*LLGGRL Trigger: CAGCCTGCCACCAAGAAGGCAAAGTGTGACGCCAGC...TTTTACAAGGAAGCCCCTGCCCCCAAGCCTCCTTGATGAAGAGATGGTTCTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | GTAAGAACCATCTCTTCATCAAGGAGGCTTGGGGGCAGGGGCTTCCTTGTAAAATGCTTTCCTGGGAGCTaGTGTGTCTGGAGGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: VRTISSSRRLGGRGFLVKCFPGS*CVWRTA Trigger: CGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCA...TTTTACAAGGAAGCCCCTGCCCCCAAGCCTCCTTGATGAAGAGATGGTTCTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | CACACGTGGGTACATAGCAGCTCTGTCACACAACAGACATTGGCTGGGGGCAGGCCACATCAACCTGGCTaGTGTTATGAAGAATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HTWVHSSSVTQQTLAGGRPHQPG*CYEECA Trigger: CGCACATTCTTCATAACACCAGCCAGGTTGATGTGG...CCTGCCCCCAGCCAATGTCTGTTGTGTGACAGAGCTGCTATGTACCCACGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | AATCTGGATAGCTTAGGTACATGTAGCAGCTCTGCCCTACACACGCGGGCACACAATGCAGGACAGGAATaGGGCCTCAGTGAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLDSLGTCSSSALHTRAHNAGQE*GLSELG Trigger: CCCAAGTTCACTGAGGCCCCATTCCTGTCCTGCATT...GTGTGCCCGCGTGTGTAGGGCAGAGCTGCTACATGTACCTAAGCTATCCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR TCA 90 bp | CAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTCCCACAAGAGGTATTTACTCCACTCATCGACTGTCATaGGAGTCTGGGACCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPMSFPSWAVLPTRGIYSTHRLS*ESGTSL Trigger: AAGACTGGTCCCAGACTCTCATGACAGTCGATGAGT...GGAGTAAATACCTCTTGTGGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | CCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACCACAGCCCAGGAACTAGAAAATaGTGCTTGAAGTACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSSKLAVRPGYTEDWDHSPGTRK*CLKYCR Trigger: TCTGCAGTACTTCAAGCAGCATTTTCTAGTTCCTGG...GCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | AATCTGGATAGCTTAGGTACATGTAGCAGCTCTGCCCTACACACGCGGGCACACCTTCCTCTTCTCCATTaGCCAGGCAACAGTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLDSLGTCSSSALHTRAHLPLLH*PGNSNQ Trigger: CTGATTACTGTTGCCTGGGCAATGGAGAAGAGGAAG...GTGTGCCCGCGTGTGTAGGGCAGAGCTGCTACATGTACCTAAGCTATCCAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CCA 90 bp | AATCTGGATAGCTTAGGTACATGTAGCAGCTCTGCCCTACACACGCGGGCACACACTGTCATGAGAGTCTaGGACCAGTCTTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLDSLGTCSSSALHTRAHTVMRV*DQSSSV Trigger: CACAGATGAAGACTGGTCCCAGACTCTCATGACAGT...GTGTGCCCGCGTGTGTAGGGCAGAGCTGCTACATGTACCTAAGCTATCCAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR GCA 90 bp | GTAAGAACCATCTCTTCATCAAGGAGGCTTGGGGGCAGGGGCTTCCTTGTAAAAGTGTGTCTGGAGGACTaGGACAACTTTGAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRTISSSRRLGGRGFLVKVCLED*DNFEKN Trigger: ATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACAC...TTTTACAAGGAAGCCCCTGCCCCCAAGCCTCCTTGATGAAGAGATGGTTCTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR TCA 90 bp | CTATATATTCTGGGAAGACCTCGCTCTTCTCTGTATTCCCCACATTCACAACAAGGAATGGGGCCTCAGTaGACTTGGGAAACTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYILGRPRSSLYSPHSQQGMGPQ*TWETSQ Trigger: TTGAGAAGTTTCCCAAGTTCACTGAGGCCCCATTCC...TTGTTGTGAATGTGGGGAATACAGAGAAGAGCGAGGTCTTCCCAGAATATATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS TCA 90 bp | TCAGGAGCTGGGCTGGCGTCACACTTTGCCTTCTTGGTGGCAGGCTaGTCCTGGTGGGGGCCGCGGGCAGGCTGCTTTCCTGGGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SGAGLASHFAFLVAG*SWWGPRAGCFPGSW Trigger: CCAGCTCCCAGGAAAGCAGCCTGCCCGCGGCCCCCACCAGGATCAGCCTGCCACCAAGAAGGCAAAGTGTGACGCCAGCCCAGCTCCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS GCA 90 bp | GAGGATGGCTGCCCCCATCAACAGGCCCATGTCACACACCCGCAGTaGTTCCACCACAGTAGTGGCCTTCTGTGGTGCCTGGCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EDGCPHQQAHVTHPQ*FHHSSGLLWCLAQA Trigger: TGCCTGTGCCAGGCACCACAGAAGGCCACTACTGTGGTGGAAGCACTGCGGGTGTGTGACATGGGCCTGTTGATGGGGGCAGCCATCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS CCA 90 bp | GGTGGCAGGCTGATCCTGGTGGGGGCCGCGGGCAGGCTGCTTTCCTaGGAGCTGGTGTGTCTGGAGGACTGCGACAACTTTGAGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: GGRLILVGAAGRLLS*ELVCLEDCDNFEKN Trigger: ATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCAGCCTGCCCGCGGCCCCCACCAGGATCAGCCTGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS CCA 90 bp | TGGTGGGGGCCGCGGGCAGGCTGCTTTCCTGGGAGCTGGTGTGTCTaGAGGACTGCGACAACTTTGAGAAGAATGTCCTCGAGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WWGPRAGCFPGSWCV*RTATTLRRMSSRMA Trigger: AGCCATCCTCGAGGACATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCAGCCTGCCCGCGGCCCCCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS TCA 90 bp | ACTGCAGAGGTGGGCAGCGGAGCCTGGGTACCATCCGCTCTAACATaGCATCAGGAGCTGGGCTGGCGTCACACTTTGCCTTCTTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TAEVGSGAWVPSALT*HQELGWRHTLPSWW Trigger: CCACCAAGAAGGCAAAGTGTGACGCCAGCCCAGCTCCTGATGTCATGTTAGAGCGGATGGTACCCAGGCTCCGCTGCCCACCTCTGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CAA 90 bp | CCTAGTAGTAAGCTGGCAGTGAGGCCTGGGTACACAGAAGACTGGGACCACAGCACCCGGCGCCACTCCTaGTCTACATCTCTCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PSSKLAVRPGYTEDWDHSTRRHS*STSLQG Trigger: TCCCTGGAGAGATGTAGACAAGGAGTGGCGCCGGGT...GCTGTGGTCCCAGTCTTCTGTGTACCCAGGCCTCACTGCCAGCTTACTACTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CAA 90 bp | AAGTGGGCCCCGAGTGTTCAGCCAATGAGCTTCCCTTCCTGGGCAGTCCTTCCCTGGGGAGATGGTGCCTaGTGGACCAAACCAGGCATT | + |
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Preference number: 5 (lower is better) Translates to: KWAPSVQPMSFPSWAVLPWGDGA*WTKPGI Trigger: AATGCCTGGTTTGGTCCACAAGGCACCATCTCCCCA...GGGAAGGACTGCCCAGGAAGGGAAGCTCATTGGCTGAACACTCGGGGCCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS TCA 90 bp | GCTGCTTTCCTGGGAGCTGGTGTGTCTGGAGGACTGCGACAACTTTaGGAAGAATGTCCTCGAGGATGGCTGCCCCCATCAACAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAFLGAGVSGGLRQL*EECPRGWLPPSTGP Trigger: TGGGCCTGTTGATGGGGGCAGCCATCCTCGAGGACATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS GCA 90 bp | CTGGAGGACTGCGACAACTTTGAGAAGAATGTCCTCGAGGATGGCTaGCCCCATCAACAGGCCCATGTCACACACCCGCAGTGCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LEDCDNFEKNVLEDG*PHQQAHVTHPQCFH Trigger: GTGGAAGCACTGCGGGTGTGTGACATGGGCCTGTTGATGGGGGCAGCCATCCTCGAGGACATTCTTCTCAAAGTTGTCGCAGTCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CAA 90 bp | CACAACAAAGTAGTTCCGCTGCCCTCCTCTTCCAGCCTGGTGCATAAGTGCCCCTTCAGCTCCTCCTCTTaGTCAGGCAGGAGCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HNKVVPLPSSSSLVHKCPFSSSS*SGRSVL Trigger: CAGGACGCTCCTGCCTGACAAAGAGGAGGAGCTGAA...GGGGCACTTATGCACCAGGCTGGAAGAGGAGGGCAGCGGAACTACTTTGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS GCA 90 bp | ACCAGTCTTCATCTGTGTACCTTGAGCCCACTTCCACGGGGACGGTaGGGCAGCCAGCAATCTCCTGGATGTACTGCAGACTCCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSLHLCTLSPLPRGR*GSQQSPGCTADSTS Trigger: AGAAGTGGAGTCTGCAGTACATCCAGGAGATTGCTGGCTGCCGCACCGTCCCCGTGGAAGTGGGCTCAAGGTACACAGATGAAGACTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS TCA 90 bp | CTGATGTCCCGCTTCAACTCTGGGATCTGGTCGAAGAGCTGGTGCTaGGCAAGGTACCCGACATCCTTTGCCTCGCTCAGGATGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: LMSRFNSGIWSKSWC*ARYPTSFASLRMNF Trigger: GAAGTTCATCCTGAGCGAGGCAAAGGATGTCGGGTACCTTGCTCAGCACCAGCTCTTCGACCAGATCCCAGAGTTGAAGCGGGACATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CCA 90 bp | ATCTCCTGGATGTACTGCAGACTCCACTTCTTCATGCACGGCCAGTaGTCGGCCACACCTTCCAAGATCACAGGCCTCCCAGGAACTAGA | + |
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Preference number: 5 (lower is better) Translates to: ISWMYCRLHFFMHGQ*SATPSKITGLPGTR Trigger: TCTAGTTCCTGGGAGGCCTGTGATCTTGGAAGGTGTGGCCGACCACTGGCCGTGCATGAAGAAGTGGAGTCTGCAGTACATCCAGGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 90 bp | AAGATCACAGGCCTCCCAGGAACTAGAAAATGCTGCTTGAAGTACTaGAGAGGTGGGCAGCGGAGCCTGGGTACCATCCGCTCTAACATG | + |
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Preference number: 5 (lower is better) Translates to: KITGLPGTRKCCLKY*RGGQRSLGTIRSNM Trigger: CATGTTAGAGCGGATGGTACCCAGGCTCCGCTGCCCACCTCTGCAGTACTTCAAGCAGCATTTTCTAGTTCCTGGGAGGCCTGTGATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CAA 90 bp | AAGTGCCCCGAGGGGAAGTATGGAGCCAAGGACCTCTGTTTCCAACTCCTAGTACTTCATCTGTGTACCTaGAGCCCACTTCCACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: KCPEGKYGAKDLCFQLLVLHLCT*SPLPRG Trigger: TCCCCGTGGAAGTGGGCTCAAGGTACACAGATGAAG...TACTAGGAGTTGGAAACAGAGGTCCTTGGCTCCATACTTCCCCTCGGGGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CAA 90 bp | AAGTGCCCCGAGGGGAAGTATGGAGCCAAGGACCTCTGTTTCCAACTCCTAGTAGGGGCCTCAGTGAACTaGGGAAACTTCTCAAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: KCPEGKYGAKDLCFQLLVGASVN*GNFSRS Trigger: CGACCTTGAGAAGTTTCCCAAGTTCACTGAGGCCCC...TACTAGGAGTTGGAAACAGAGGTCCTTGGCTCCATACTTCCCCTCGGGGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS GCA 90 bp | GATCTGGTCGAAGAGCTGGTGCTGAGCAAGGTACCCGACATCCTTTaGCTCGCTCAGGATGAACTTCTGGATGAACTCATCGACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DLVEELVLSKVPDIL*LAQDELLDELIDCH Trigger: ATGACAGTCGATGAGTTCATCCAGAAGTTCATCCTGAGCGAGGCAAAGGATGTCGGGTACCTTGCTCAGCACCAGCTCTTCGACCAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CCA 90 bp | CTCAGGATGAACTTCTGGATGAACTCATCGACTGTCATGAGAGTCTaGGACCAGTCTTCATCTGTGTACCTTGAGCCCACTTCCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRMNFWMNSSTVMRV*DQSSSVYLEPTSTG Trigger: CCCCGTGGAAGTGGGCTCAAGGTACACAGATGAAGACTGGTCCCAGACTCTCATGACAGTCGATGAGTTCATCCAGAAGTTCATCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CCA 90 bp | GAAGTTCTGCTGGGGGTCCTGATGCAGTGGGGAGATGGTGCCTTGTaGACCAAACCAGGCATTGATAGTGATCTCTTCCTCTTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: EVLLGVLMQWGDGAL*TKPGIDSDLFLFSI Trigger: AATGGAGAAGAGGAAGAGATCACTATCAATGCCTGGTTTGGTCCACAAGGCACCATCTCCCCACTGCATCAGGACCCCCAGCAGAACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 90 bp | AACCTGGCTGGTGTTATGAAGAATGTGCGTCTCGTGAGGGTACACTaGCTCAGACTCTTGCGGCGAATACAATCGGATGTACTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLAGVMKNVRLVRVH*LRLLRRIQSDVLPS Trigger: GGAAGGAAGTACATCCGATTGTATTCGCCGCAAGAGTCTGAGGCAGTGTACCCTCACGAGACGCACATTCTTCATAACACCAGCCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS-3UTR CAA 90 bp | CTGTATTCCCCACATTCACAACAAAGTAGTTCCGCTGCCCTCCTCTTCCAGCCTGGACCAAACCAGGCATaGATAGTGATCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LYSPHSQQSSSAALLFQPGPNQA*IVISSS Trigger: AGAGGAAGAGATCACTATCAATGCCTGGTTTGGTCC...AGGCTGGAAGAGGAGGGCAGCGGAACTACTTTGTTGTGAATGTGGGGAATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS TCA 72 bp | GTGGGCAGCGGAGCCTGGGTACCATCCGCTCTAACATaGCATCAGGAGCTGGGCTGGCGTCACACTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VGSGAWVPSALT*HQELGWRHTLP Trigger: AGGCAAAGTGTGACGCCAGCCCAGCTCCTGATGTCATGTTAGAGCGGATGGTACCCAGGCTCCGCTGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS TCA 72 bp | CATGAGAGTCTGGGACCAGTCTTCATCTGTGTACCTTaGGCCCACTTCCACGGGGACGGTGCGGCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HESLGPVFICVP*AHFHGDGAAAS Trigger: GCTGGCTGCCGCACCGTCCCCGTGGAAGTGGGCTCAAGGTACACAGATGAAGACTGGTCCCAGACTCTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 72 bp | TGCCCCCATCAACAGGCCCATGTCACACACCCGCAGTaGTTCCACCACAGTAGTGGCCTTCTGTGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CPHQQAHVTHPQ*FHHSSGLLWCL Trigger: CAGGCACCACAGAAGGCCACTACTGTGGTGGAAGCACTGCGGGTGTGTGACATGGGCCTGTTGATGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS GCA 72 bp | GGCCTCCCAGGAACTAGAAAATGCTGCTTGAAGTACTaGAGAGGTGGGCAGCGGAGCCTGGGTACCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GLPGTRKCCLKY*RGGQRSLGTIR Trigger: GCGGATGGTACCCAGGCTCCGCTGCCCACCTCTGCAGTACTTCAAGCAGCATTTTCTAGTTCCTGGGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 72 bp | CATCTGTGTACCTTGAGCCCACTTCCACGGGGACGGTaGGGCAGCCAGCAATCTCCTGGATGTACTGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLCTLSPLPRGR*GSQQSPGCTAD Trigger: GTCTGCAGTACATCCAGGAGATTGCTGGCTGCCGCACCGTCCCCGTGGAAGTGGGCTCAAGGTACACAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CCA 72 bp | CCGCGGGCAGGCTGCTTTCCTGGGAGCTGGTGTGTCTaGAGGACTGCGACAACTTTGAGAAGAATGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PRAGCFPGSWCV*RTATTLRRMSS Trigger: CGAGGACATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCAGCCTGCCCGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS CCA 72 bp | ACTTCCACGGGGACGGTGCGGCAGCCAGCAATCTCCTaGATGTACTGCAGACTCCACTTCTTCATGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTGTVRQPAIS*MYCRLHFFMHG Trigger: GCCGTGCATGAAGAAGTGGAGTCTGCAGTACATCCAGGAGATTGCTGGCTGCCGCACCGTCCCCGTGGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CAA 72 bp | ACCTTCTCACCGAGGTCCAGCTTCAGCTCCTCCTCTTaGTCAGGCAGGAGCGTCCTGAGCTCCTTCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TFSPRSSFSSSS*SGRSVLSSFQR Trigger: CCTCTGGAAGGAGCTCAGGACGCTCCTGCCTGACAAAGAGGAGGAGCTGAAGCTGGACCTCGGTGAGAAGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS CAA 90 bp | GGCTGCTTTCCTGGGAGCTGGTGTGTCTGGAGGACTGCGACAACTTaGAGAAGAATGTCCTCGAGGATGGCTGCCCCCATCAACAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GCFPGSWCVWRTATT*RRMSSRMAAPINRP Trigger: GGGCCTGTTGATGGGGGCAGCCATCCTCGAGGACATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS TCA 72 bp | CGCTTCAACTCTGGGATCTGGTCGAAGAGCTGGTGCTaGGCAAGGTACCCGACATCCTTTGCCTCGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFNSGIWSKSWC*ARYPTSFASLR Trigger: CCTGAGCGAGGCAAAGGATGTCGGGTACCTTGCTCAGCACCAGCTCTTCGACCAGATCCCAGAGTTGAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 72 bp | TGCGACAACTTTGAGAAGAATGTCCTCGAGGATGGCTaGCCCCATCAACAGGCCCATGTCACACACCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CDNFEKNVLEDG*PHQQAHVTHPQ Trigger: CTGCGGGTGTGTGACATGGGCCTGTTGATGGGGGCAGCCATCCTCGAGGACATTCTTCTCAAAGTTGTCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS CCA 72 bp | ATGTACTGCAGACTCCACTTCTTCATGCACGGCCAGTaGTCGGCCACACCTTCCAAGATCACAGGCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MYCRLHFFMHGQ*SATPSKITGLP Trigger: TGGGAGGCCTGTGATCTTGGAAGGTGTGGCCGACCACTGGCCGTGCATGAAGAAGTGGAGTCTGCAGTACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS TCA 72 bp | AGATCACAGGCCTCCCAGGAACTAGAAAATGCTGCTTaGAGTACTGCAGAGGTGGGCAGCGGAGCCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSQASQELENAA*STAEVGSGAWV Trigger: TACCCAGGCTCCGCTGCCCACCTCTGCAGTACTTCAAGCAGCATTTTCTAGTTCCTGGGAGGCCTGTGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 72 bp | AGGCTGCTTTCCTGGGAGCTGGTGTGTCTGGAGGACTaGGACAACTTTGAGAAGAATGTCCTCGAGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: RLLSWELVCLED*DNFEKNVLEDG Trigger: GCCATCCTCGAGGACATTCTTCTCAAAGTTGTCGCAGTCCTCCAGACACACCAGCTCCCAGGAAAGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033010.9 |
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| CDS GCA 72 bp | CCTTCCAAGATCACAGGCCTCCCAGGAACTAGAAAATaGTGCTTGAAGTACTGCAGAGGTGGGCAGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSKITGLPGTRK*CLKYCRGGQRS Trigger: GCTCCGCTGCCCACCTCTGCAGTACTTCAAGCAGCATTTTCTAGTTCCTGGGAGGCCTGTGATCTTGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CCA 72 bp | CTGGGGGTCCTGATGCAGTGGGGAGATGGTGCCTTGTaGACCAAACCAGGCATTGATAGTGATCTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LGVLMQWGDGAL*TKPGIDSDLFL Trigger: GAGGAAGAGATCACTATCAATGCCTGGTTTGGTCCACAAGGCACCATCTCCCCACTGCATCAGGACCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CAA 72 bp | AAGATCACAGGCCTCCCAGGAACTAGAAAATGCTGCTaGAAGTACTGCAGAGGTGGGCAGCGGAGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: KITGLPGTRKCC*KYCRGGQRSLG Trigger: ACCCAGGCTCCGCTGCCCACCTCTGCAGTACTTCAAGCAGCATTTTCTAGTTCCTGGGAGGCCTGTGATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CAA 90 bp | CAGGAAGTTCTGCTGGGGGTCCTGATGCAGTGGGGAGATGGTGCCTaGTGGACCAAACCAGGCATTGATAGTGATCTCTTCCTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QEVLLGVLMQWGDGA*WTKPGIDSDLFLFS Trigger: GGAGAAGAGGAAGAGATCACTATCAATGCCTGGTTTGGTCCACAAGGCACCATCTCCCCACTGCATCAGGACCCCCAGCAGAACTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS GCA 72 bp | CAATCTCCTGGATGTACTGCAGACTCCACTTCTTCATaGACGGCCAGTGGTCGGCCACACCTTCCAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: QSPGCTADSTSS*TASGRPHLPRS Trigger: TGATCTTGGAAGGTGTGGCCGACCACTGGCCGTGCATGAAGAAGTGGAGTCTGCAGTACATCCAGGAGATTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CAA 72 bp | AGTGGGGAGATGGTGCCTTGTGGACCAAACCAGGCATaGATAGTGATCTCTTCCTCTTCTCCATTGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGEMVPCGPNQA*IVISSSSPLPR Trigger: CCTGGGCAATGGAGAAGAGGAAGAGATCACTATCAATGCCTGGTTTGGTCCACAAGGCACCATCTCCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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| CDS CCA 72 bp | AACTTCTGGATGAACTCATCGACTGTCATGAGAGTCTaGGACCAGTCTTCATCTGTGTACCTTGAGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: NFWMNSSTVMRV*DQSSSVYLEPT Trigger: AGTGGGCTCAAGGTACACAGATGAAGACTGGTCCCAGACTCTCATGACAGTCGATGAGTTCATCCAGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033010.9 ENSMUST00000135129.2 |
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