Pregenerated sensors for KDM5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030180Ensembl transcript IDs: ENSMUST00000005108.10, ENSMUST00000132009.4, ENSMUST00000135802.8, ENSMUST00000203373.2
Found 485 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTaGGGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: VRSLQARAAATCDST*GKASRRTGIGRPLA Trigger: TGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR CCA 90 bp | TTCATAATCTCACTGCGGCTCAAGTCAGAGTCAGCCAGGCAGAGCTaGTTCACAGCAGCCACTGCTCATGGTTTCTGCAGCAATAACAGG | + |
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Preference number: 1 (lower is better) Translates to: FIISLRLKSESARQS*FTAATAHGFCSNNR Trigger: CCTGTTATTGCTGCAGAAACCATGAGCAGTGGCTGCTGTGAACCAGCTCTGCCTGGCTGACTCTGACTTGAGCCGCAGTGAGATTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | GCTGAGCCACAGAACCACAGGTCTCAGCTTCTTTCACCGCGTCCCTaGGCTTTCGAAAGAGATCATTCTCTGGGTATTTCCTATCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AEPQNHRSQLLSPRP*AFERDHSLGISYPQ Trigger: CTGAGGATAGGAAATACCCAGAGAATGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAGAAGCTGAGACCTGTGGTTCTGTGGCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR GCA 90 bp | TGTGGATCTGATAGAGTTAGCCTTACTTCATCCAGCCATCGAGCCTaGTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: CGSDRVSLTSSSHRA*WSSCFSRGNSGSST Trigger: TGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAACTCTATCAGATCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR CCA 90 bp | GCTGCTGCACCAAAGAAGACATCCTCTGCACAGATGATAAGAGAATaGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: AAAPKKTSSAQMIRE*SPHNPCREEASTKR Trigger: CCTCTTAGTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGTGCAGAGGATGTCTTCTTTGGTGCAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | TTCACAGCAGCCACTGCTCATGGTTTCTGCAGCAATAACAGGAGGTaGAACAAACATCTGCCTCTTCTCCAACAACTAGGGACCTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: FTAATAHGFCSNNRR*NKHLPLLQQLGTCN Trigger: GTTACAGGTCCCTAGTTGTTGGAGAAGAGGCAGATGTTTGTTTCACCTCCTGTTATTGCTGCAGAAACCATGAGCAGTGGCTGCTGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR CCA 90 bp | GAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATCTaGCAGTGTCTGCCATGTTCCTCAGGTCATGGGCAATCACAGATT | + |
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Preference number: 1 (lower is better) Translates to: ERKGRTCEITSISQI*QCLPCSSGHGQSQI Trigger: AATCTGTGATTGCCCATGACCTGAGGAACATGGCAGACACTGCCAGATCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | GTAAGGAGTTCCTGTAGTTCGGCCATTGCTTTTTCTACAGCATGGTaGGGTGCCAAGCCTACGCCAGAGTCAATCAATTTCTTCATGACA | + |
|
Preference number: 1 (lower is better) Translates to: VRSSCSSAIAFSTAW*GAKPTPESINFFMT Trigger: TGTCATGAAGAAATTGATTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCGAACTACAGGAACTCCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR GCA 90 bp | ACATCCTCTGCACAGATGATAAGAGAATGGAGCCCACACAATCCATaGAGAGAGGAAGCCAGCACTAAGAGGACTTTTTCTGAAGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: TSSAQMIREWSPHNP*REEASTKRTFSEVH Trigger: ATGGACTTCAGAAAAAGTCCTCTTAGTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGTGCAGAGGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | CTAAGACATTTGTTCTGCATGGGGCAAGAGCACAAATCAGTTGGATaGTACAGACATACAAGTCGCTCCGGATTACAGGAGCATGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: LRHLFCMGQEHKSVG*YRHTSRSGLQEHVR Trigger: TCTCACATGCTCCTGTAATCCGGAGCGACTTGTATGTCTGTATCATCCAACTGATTTGTGCTCTTGCCCCATGCAGAACAAATGTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR CCA 90 bp | AGCTTCTTTCACCGCGTCCCTGAGCTTTCGAAAGAGATCATTCTCTaGGTATTTCCTATCCTCAGCATCTTCCAGCATTACTCTCAATTC | + |
|
Preference number: 1 (lower is better) Translates to: SFFHRVPELSKEIIL*VFPILSIFQHYSQF Trigger: GAATTGAGAGTAATGCTGGAAGATGCTGAGGATAGGAAATACCCAGAGAATGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR TCA 90 bp | GAACCTGACCTTAATTCAGCAAACCACACTCAACGAATCAAGAGTTaGAATACTTGGCTGCTGCACCAAAGAAGACATCCTCTGCACAGA | + |
|
Preference number: 1 (lower is better) Translates to: EPDLNSANHTQRIKS*NTWLLHQRRHPLHR Trigger: TCTGTGCAGAGGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTGTGGTTTGCTGAATTAAGGTCAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | CCATTTGAACAACTGATTCTCTCAATCGTGTTTCTTCTTCAGTCATaGGAGTCAACTCTTTGCATACCATGGCAGCCAGCCCCACATCTA | + |
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Preference number: 1 (lower is better) Translates to: PFEQLILSIVFLLQS*ESTLCIPWQPAPHL Trigger: TAGATGTGGGGCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAACACGATTGAGAGAATCAGTTGTTCAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR GCA 90 bp | TTGAGTATTTTCCAGAATAGATGTCTGTATGCCACATGTGTACAGTaGAGTAACGTCCAGAAGAGGACATTACAGATGGCTGTGAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LSIFQNRCLYATCVQ*SNVQKRTLQMAVSH Trigger: GTGGCTCACAGCCATCTGTAATGTCCTCTTCTGGACGTTACTGCACTGTACACATGTGGCATACAGACATCTATTCTGGAAAATACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR CCA 90 bp | GGACTTTTTCTGAAGTCCATTCATCTTTGGAAACAACATTCTGAGTaGTCGGAACCACTCTGCTTGATGAGTAAGGTCTCAATGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GLFLKSIHLWKQHSE*SEPLCLMSKVSMWS Trigger: GGACCACATTGAGACCTTACTCATCAAGCAGAGTGGTTCCGACCACTCAGAATGTTGTTTCCAAAGATGAATGGACTTCAGAAAAAGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | CAGAAGATGACAGGCAGCTATTCACAGGTACAGACTGCCTATGTCTaGGGTCTCCAACAGACAAACACTGTACAAAGAACACAAATTACT | + |
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Preference number: 1 (lower is better) Translates to: QKMTGSYSQVQTAYV*GLQQTNTVQRTQIT Trigger: AGTAATTTGTGTTCTTTGTACAGTGTTTGTCTGTTGGAGACCTCAGACATAGGCAGTCTGTACCTGTGAATAGCTGCCTGTCATCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR GCA 90 bp | AACCGTCTACAACAAGTATCAGTTGGTCGAAAGCCACTTCTTATATaGCCCACTAAGCACATCAATGTATTAATGCCAAACAGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NRLQQVSVGRKPLLI*PTKHINVLMPNSLL Trigger: CAGGAGGCTGTTTGGCATTAATACATTGATGTGCTTAGTGGGGCATATAAGAAGTGGCTTTCGACCAACTGATACTTGTTGTAGACGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR CCA 90 bp | CTATTAACATTTGGAGTTTGGAAGAATCTGGGGTTTCATCCATCATaGCCTCCTGGGCACGTTCATGAAATTCTTCTACATCATCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LLTFGVWKNLGFHPS*PPGHVHEILLHHPA Trigger: TGCTGGATGATGTAGAAGAATTTCATGAACGTGCCCAGGAGGCCATGATGGATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR GCA 90 bp | TTCAGACATACAAAACATTCAGCACTGACTAGAATAAGACCAAGCTaGCCAACAGACAGGGACAAGTCCCAACATGGAGGAAATATATTA | + |
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Preference number: 1 (lower is better) Translates to: FRHTKHSALTRIRPS*PTDRDKSQHGGNIL Trigger: TAATATATTTCCTCCATGTTGGGACTTGTCCCTGTCTGTTGGGCAGCTTGGTCTTATTCTAGTCAGTGCTGAATGTTTTGTATGTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR TCA 90 bp | ATATTCAAAGTAACGGTGTGGTTTGATTTAAAGGGACAGGATGTCTaGAAGGTACTGTGCTCAAGGACCTACGCTAAAAGCAACATTCTA | + |
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Preference number: 1 (lower is better) Translates to: IFKVTVWFDLKGQDV*KVLCSRTYAKSNIL Trigger: TAGAATGTTGCTTTTAGCGTAGGTCCTTGAGCACAGTACCTTTCAGACATCCTGTCCCTTTAAATCAAACCACACCGTTACTTTGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR CCA 90 bp | TCCATTCACGAGCCTTTTGTAAGGCTTCTTTTAAGGACAACACATTaGGTAGAAAGGCTGGAATGTTCTTGGCTTCATTCACAATATTTT | + |
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Preference number: 1 (lower is better) Translates to: SIHEPFVRLLLRTTH*VERLECSWLHSQYF Trigger: AAAATATTGTGAATGAAGCCAAGAACATTCCAGCCTTTCTACCCAATGTGTTGTCCTTAAAAGAAGCCTTACAAAAGGCTCGTGAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR CCA 90 bp | TCAAACATCATGAAATCAAGTTACAATTTCTGTAAGGCACAACTGTaGAGTAATTTTAATTCAGAACATGGCTGCTCTGCCAAGAGATCA | + |
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Preference number: 1 (lower is better) Translates to: SNIMKSSYNFCKAQL*SNFNSEHGCSAKRS Trigger: TGATCTCTTGGCAGAGCAGCCATGTTCTGAATTAAAATTACTCCACAGTTGTGCCTTACAGAAATTGTAACTTGATTTCATGATGTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR-3UTR TCA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGTAGTTCTGCATGCTaGACACTGCCGCTCATCATC | + |
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Preference number: 2 (lower is better) Translates to: VRPVRSLQARAAATCDSTCSSAC*TLPLII Trigger: GATGATGAGCGGCAGTGTTCAGCATGCAGAACTACA...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGTCCAGCCATCGAGCCTaGTGGAGCTCTTGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: AQYVLSRPVLLLPVTPLESSHRA*WSSCFS Trigger: ACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGA...CTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTCTGCATGCTGAACACTaGCGCTCATCATCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: VRPVRSLQARAAATCDSTLHAEH*RSSSGT Trigger: TGTTCCTGATGATGAGCGGCAGTGTTCAGCATGCAG...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGGGTTTCATCCATCATaGCCTCCTGGGCACGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: AQYVLSRPVLLLPVTPLEGFHPS*PPGHVH Trigger: ATGAACGTGCCCAGGAGGCCATGATGGATGAAACCC...CTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACACTCTTTGCATACCATaGCAGCCAGCCCCACATCTA | + |
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Preference number: 2 (lower is better) Translates to: PAGALALVGAIQVAPHRDTLCIP*QPAPHL Trigger: TAGATGTGGGGCTGGCTGCCATGGTATGCAAAGAGT...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTAAATTTGCCATACTGTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTACAGCATGGTGAGGTaGCAAGCCTACGCCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FSKFAILCRGLACRQTLAYSMVR*QAYARV Trigger: GACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTA...GGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAGTATGGCAAATTTAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACTGCTGAGGCCATGTTaGAAACTACAGGCATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RRSWKGREGLVKSHPSLRLLRPC*KLQALG Trigger: CCCCAATGCCTGTAGTTTCCAACATGGCCTCAGCAG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTGGGTTTCATCCATCATaGCCTCCTGGGCACGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RQTLAFSSHRSETVRSSCGFHPS*PPGHVH Trigger: ATGAACGTGCCCAGGAGGCCATGATGGATGAAACCC...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAATGTCTATTAACATTTaGAGTTTGGAAGAATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QYVLSRPVLLLPVTPLEAMSINI*SLEESG Trigger: CCCAGATTCTTCCAAACTCCAAATGTTAATAGACAT...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTTTAACATTTGGAGTTTaGAAGAATCTGGGGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: PAIEPAGALALVGAIQVALTFGV*KNLGFH Trigger: ATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAA...AGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAAGAGCACAAATCAGTTaGATGATACAGACATACAAG | + |
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Preference number: 2 (lower is better) Translates to: LCRGLACRQTLAFSSHRSRAQIS*MIQTYK Trigger: CTTGTATGTCTGTATCATCCAACTGATTTGTGCTCT...TGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAAGTCTGGAATACTTGTaGATGAGGGTTTCCCAGATA | + |
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Preference number: 2 (lower is better) Translates to: RRSWKGREGLVKSHPSLRSLEYL*MRVSQI Trigger: TATCTGGGAAACCCTCATTCACAAGTATTCCAGACT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATGTAGTGCTGAGAACTaGACCTGGGTCCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLEQIARVSRAIQAEQRVCSAEN*TWVLWK Trigger: CTTCCAGAGGACCCAGGTTCAGTTCTCAGCACTACA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAAGCAATAACAGGAGGTaGAACAAACATCTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RRSWKGREGLVKSHPSLRSNNRR*NKHLPL Trigger: AAGAGGCAGATGTTTGTTTCACCTCCTGTTATTGCT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTAAAGACTTCTTCTTCTaGCATCACGACACCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: RQTLAFSSHRSETVRSSCKDFFF*HHDTHL Trigger: CAAATGGGTGTCGTGATGTCAGAAGAAGAAGTCTTT...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAGACCAAAGGCGGAGCTaGAAAGGAAGGGAAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: SLEQIARVSRAIQAEQRVDQRRS*KGREGL Trigger: AAGTCCTTCCCTTCCTTTCCAGCTCCGCCTTTGGTC...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR CAA 90 bp | GATTCTCTCAATCGTGTTTCTTCTTCAGTCATGAGAGTCAACTCTTaGCATACCATGGCAGCCAGCCCCACATCTAAGCATTCTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: DSLNRVSSSVMRVNS*HTMAASPTSKHSGS Trigger: AGATCCAGAATGCTTAGATGTGGGGCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAACACGATTGAGAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR TCA 90 bp | GAACCACAGGTCTCAGCTTCTTTCACCGCGTCCCTGAGCTTTCGAAAGAGATCATTTCTTCTTCAGTCATaGGAGTCAACTCTTTGCATA | + |
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Preference number: 2 (lower is better) Translates to: EPQVSASFTASLSFRKRSFLLQS*ESTLCI Trigger: TATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAA...TGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAGAAGCTGAGACCTGTGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCCTCCTGTTTTTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTTCCAGCCATCGAGCCTaGTGGAGCTCTTGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: FFLLFLPLPYTPMSVRGLSSHRA*WSSCFS Trigger: ACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGA...AAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAAAAACAGGAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACGAGTTTGGAAGAATCTaGGGTTTCATCCATCATGGC | + |
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Preference number: 2 (lower is better) Translates to: ALKLFQVSIVVATLNSFHEFGRI*GFIHHG Trigger: GCCATGATGGATGAAACCCCAGATTCTTCCAAACTC...GTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACGCATTCTGGATCTGCTaGCATCTTGAAAATGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: ALKLFQVSIVVATLNSFHAFWIC*HLENEF Trigger: GAACTCATTTTCAAGATGGCAGCAGATCCAGAATGC...GTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACCTCTGATGAAGCCATaGTGTTATTCACAAATATCT | + |
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Preference number: 2 (lower is better) Translates to: RRSWKGREGLVKSHPSLRPLMKP*CYSQIS Trigger: AGATATTTGTGAATAACACCATGGCTTCATCAGAGG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATTAATAACGAAGAAGTaGAACTTTGAGGAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RRSWKGREGLVKSHPSLRLITKK*NFEESE Trigger: TTCTGACTCCTCAAAGTTGCACTTCTTCGTTATTAA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTACAGATGATAAGAGAATaGAGCCCACACAATCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: SLEQIARVSRAIQAEQRVQMIRE*SPHNPC Trigger: GCATGGATTGTGTGGGCTCCATTCTCTTATCATCTG...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTTTAACATTTGGAGTTTaGAAGAATCTGGGGTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RQTLAFSSHRSETVRSSCLTFGV*KNLGFH Trigger: ATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAA...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCCACAAATCAGTTGGATaGTACAGACATACAAGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: KLFQVSIVVATLNSFHFSHKSVG*YRHTSR Trigger: GCGACTTGTATGTCTGTATCATCCAACTGATTTGTG...GCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR-3UTR GCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATAGCCCACACAATCCATaGAGAGAGGAAGCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: EIQDTSTATHSNNITGQDSPHNP*REEAST Trigger: AGTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCT...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTGCCATGCGTGAAGCATaGTGGAGTCTGGAATACTTG | + |
|
Preference number: 2 (lower is better) Translates to: GNLEHRHNGKQCSKISYSAMREA*WSLEYL Trigger: CAAGTATTCCAGACTCCACCATGCTTCACGCATGGC...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTGCCAGTCTTGCTCATaGCCATGCGTGAAGCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: EIQDTSTATHSNNITGQDCQSCS*PCVKHG Trigger: ACCATGCTTCACGCATGGCCATGAGCAAGACTGGCA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTAGGATTCTTAACCGTTaGGTCATCTTTCCACCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GNLEHRHNGKQCSKISYSRILNR*VIFPPP Trigger: AGGGGGTGGAAAGATGACTCAACGGTTAAGAATCCT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTGCAAAAGCTGTTATCTaGCAGTCTTGCTCATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GNLEHRHNGKQCSKISYSAKAVI*QSCSWP Trigger: TGGCCATGAGCAAGACTGGCAGATAACAGCTTTTGC...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTCAGGAGAGAGAGGCATaGAGATTTCTCAGTGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GNLEHRHNGKQCSKISYSQEREA*RFLSAS Trigger: ACTAGCACTGAGAAATCTGCATGCCTCTCTCTCCTG...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCTGTCCATTCACGAGCATGTCTATTAACATTTaGAGTTTGGAAGAATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SIVVATLNSFHFSCPFTSMSINI*SLEESG Trigger: CCCAGATTCTTCCAAACTCCAAATGTTAATAGACAT...GCTCGTGAATGGACAGCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR CAA 90 bp | GTCCATTCACGAGCCTTTTGTAAGGCTTCTTTTAAGGACAACACATaGGGTAGAAAGGCTGGAATGTTCTTGGCTTCATTCACAATATTT | + |
|
Preference number: 2 (lower is better) Translates to: VHSRAFCKASFKDNT*GRKAGMFLASFTIF Trigger: AAATATTGTGAATGAAGCCAAGAACATTCCAGCCTTTCTACCCAATGTGTTGTCCTTAAAAGAAGCCTTACAAAAGGCTCGTGAATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAATAAACACAAGCAGCTaGGGTCATAGACTGCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKINTSS*GHRLHC Trigger: GCAGTGCAGTCTATGACCTCAGCTGCTTGTGTTTAT...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTGAAGGGAAGGACTTGTaGAATCACATCCATCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GNLEHRHNGKQCSKISYSEGKDL*NHIHLS Trigger: TGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTC...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAATTTATTTAAGAGACTaGAGTAAAGGGGAACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLEQIARVSRAIQAEQRVIYLRD*SKGEQR Trigger: CCTCTGTTCCCCTTTACTCCAGTCTCTTAAATAAAT...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAATTCTTTCCCTCTTGTaGTATAAATACCACGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SLEQIARVSRAIQAEQRVILSLL*YKYHVV Trigger: TACTACGTGGTATTTATAGCACAAGAGGGAAAGAAT...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTTTAGCTGTCCATTCACGAGCCTTTTGTAAGGCTTCTTTTAAGGACAACACCTGTAACAATGTATaGCTGGAATTCTTTTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: STLAVHSRAFCKASFKDNTCNNV*LEFFLR Trigger: CCTTAAAAAGAATTCCAGCCATACATTGTTACAGGT...GTTGTCCTTAAAAGAAGCCTTACAAAAGGCTCGTGAATGGACAGCTAAAGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATTCACAAATATCTGCTaGGGCCATGTTGGAAACTAC | + |
|
Preference number: 2 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKFTNIC*GHVGNY Trigger: GTAGTTTCCAACATGGCCTCAGCAGATATTTGTGAA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTAAGTATATACTACCATaGCCAGCTGACAAGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GNLEHRHNGKQCSKISYSKYILP*PADKQF Trigger: AAACTGCTTGTCAGCTGGGCATGGTAGTATATACTT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 90 bp | TGGAAGATATGTTTAGGTGAGAATGAAGAAGGAAGTGCTAACTCCTaGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: WKICLGENEEGSANS*YYKEGMGFLYQKAE Trigger: TTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAGCACTTCCTTCTTCATTCTCACCTAAACATATCTTCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 90 bp | TTCTTAACCGTTGAGTCATCTTTCCACCCCCTCCCTTATGGTCTTTaGAGTTTTTGTCTAAATCTATGGTTAAGATATCAAAGTCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FLTVESSFHPLPYGL*SFCLNLWLRYQSLQ Trigger: TTGAAGACTTTGATATCTTAACCATAGATTTAGACAAAAACTCAAAAGACCATAAGGGAGGGGGTGGAAAGATGACTCAACGGTTAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR GCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAAAGCCACTTCTTATATaGCCCACTAAGCACATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKKPLLI*PTKHIN Trigger: ATTGATGTGCTTAGTGGGGCATATAAGAAGTGGCTT...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | CTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTaGGGCAAGGCATCAAGACGCACAGGGATAGGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: LQARAAATCDST*GKASRRTGIGR Trigger: ACGCCCTATCCCTGTGCGTCTTGATGCCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR TCA 72 bp | GTCCCTTCCCGGTGCACATCCTATGCCGCACAGCGGTaGGTGGATCCCGGCCAAGAGAATACTCCAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VPSRCTSYAAQR*VDPGQENTPVS Trigger: TGAGACTGGAGTATTCTCTTGGCCGGGATCCACTCACCGCTGTGCGGCATAGGATGTGCACCGGGAAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | TCACTGCGGCTCAAGTCAGAGTCAGCCAGGCAGAGCTaGTTCACAGCAGCCACTGCTCATGGTTTCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLRLKSESARQS*FTAATAHGFCS Trigger: GCTGCAGAAACCATGAGCAGTGGCTGCTGTGAACCAGCTCTGCCTGGCTGACTCTGACTTGAGCCGCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | CTTCCCGGTGCACATCCTATGCCGCACAGCGGTGAGTaGATCCCGGCCAAGAGAATACTCCAGTCTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LPGAHPMPHSGE*IPAKRILQSQT Trigger: TGTCTGAGACTGGAGTATTCTCTTGGCCGGGATCCACTCACCGCTGTGCGGCATAGGATGTGCACCGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTTTAAGGACAACACATaGGGTAGAAAGGCTGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VRPVRSLQARAAATCDSTFKDNT*GRKAGM Trigger: CATTCCAGCCTTTCTACCCAATGTGTTGTCCTTAAA...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAAGGCCAAGTGTCATAGGATaGTGCTCTCACTTTGACACC | + |
|
Preference number: 3 (lower is better) Translates to: YVLSRPVLLLPVTPLEARPSVIG*CSHFDT Trigger: GGTGTCAAAGTGAGAGCACAATCCTATGACACTTGG...CCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR TCA 72 bp | ACAGATGGCTGTGAGCCACCATGTAGTGCTGAGAACTaGACCTGGGTCCTCTGGAAGAGCAGCCAGGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TDGCEPPCSAEN*TWVLWKSSQDS Trigger: AGAATCCTGGCTGCTCTTCCAGAGGACCCAGGTTCAGTTCTCAGCACTACATGGTGGCTCACAGCCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTCAATATTTTCTAAATTaGCCATACTGTGCCGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VRPVRSLQARAAATCDSTQYFLN*PYCAEV Trigger: GACCTCGGCACAGTATGGCAAATTTAGAAAATATTG...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCACCTGTAGTTCGGCCATaGCTTTTTCTACAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GKASRRTGIGRPLADRLSPVVRP*LFLQHG Trigger: ACCATGCTGTAGAAAAAGCAATGGCCGAACTACAGG...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR GCA 72 bp | ATACCAGACAGGCCTCGAACTCAAGAAAGATCCTCCTaGCTCTGGCTCCTGAGTGCTGGAAATAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IPDRPRTQERSS*LWLLSAGNKGV Trigger: CACACCTTTATTTCCAGCACTCAGGAGCCAGAGGCAGGAGGATCTTTCTTGAGTTCGAGGCCTGTCTGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | GATAGAGTTAGCCTTACTTCATCCAGCCATCGAGCCTaGTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: DRVSLTSSSHRA*WSSCFSRGNSG Trigger: ACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAACTCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR TCA 72 bp | GCCATGCGTGAAGCATGGTGGAGTCTGGAATACTTGTaGATGAGGGTTTCCCAGATAAGCATGCATCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: AMREAWWSLEYL*MRVSQISMHHR Trigger: TCGGTGATGCATGCTTATCTGGGAAACCCTCATTCACAAGTATTCCAGACTCCACCATGCTTCACGCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | ACCAAAGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTaGAATCACATCCATCTCTCAGATCTGGCAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TKGGAGKEGKDL*NHIHLSDLAVS Trigger: AGACACTGCCAGATCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCTTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | CAGAACCACAGGTCTCAGCTTCTTTCACCGCGTCCCTaGGCTTTCGAAAGAGATCATTCTCTGGGTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QNHRSQLLSPRP*AFERDHSLGIS Trigger: GGAAATACCCAGAGAATGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAGAAGCTGAGACCTGTGGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR CCA 72 bp | GGAAGGACTTGTGAAATCACATCCATCTCTCAGATCTaGCAGTGTCTGCCATGTTCCTCAGGTCATGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRTCEITSISQI*QCLPCSSGHGQ Trigger: TTGCCCATGACCTGAGGAACATGGCAGACACTGCCAGATCTGAGAGATGGATGTGATTTCACAAGTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | CATTTCTTGGACCCTGTTGAGGACCAAAGGCGGAGCTaGAAAGGAAGGGAAGGACTTGTGAAATCACATCCA | + |
|
Preference number: 3 (lower is better) Translates to: HFLDPVEDQRRS*KGREGLVKSHP Trigger: TGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCTTTGGTCCTCAACAGGGTCCAAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | GCCACTGCTCATGGTTTCTGCAGCAATAACAGGAGGTaGAACAAACATCTGCCTCTTCTCCAACAACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ATAHGFCSNNRR*NKHLPLLQQLG Trigger: CCCTAGTTGTTGGAGAAGAGGCAGATGTTTGTTTCACCTCCTGTTATTGCTGCAGAAACCATGAGCAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | CTCGAACTCAAGAAAGATCCTCCTGCCTCTGGCTCCTaGGTGCTGGAAATAAAGGTGTGCTTCATAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LELKKDPPASGS*VLEIKVCFITA Trigger: AGCAGTTATGAAGCACACCTTTATTTCCAGCACTCAGGAGCCAGAGGCAGGAGGATCTTTCTTGAGTTCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | TCCTGTAGTTCGGCCATTGCTTTTTCTACAGCATGGTaGGGTGCCAAGCCTACGCCAGAGTCAATCAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SCSSAIAFSTAW*GAKPTPESINF Trigger: GAAATTGATTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCGAACTACAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR GCA 72 bp | GTGAAATCACATCCATCTCTCAGATCTGGCAGTGTCTaGCATGTTCCTCAGGTCATGGGCAATCACAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: VKSHPSLRSGSV*HVPQVMGNHRL Trigger: CAATCTGTGATTGCCCATGACCTGAGGAACATGGCAGACACTGCCAGATCTGAGAGATGGATGTGATTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | CATGGTGTTATTCACAAATATCTGCTGAGGCCATGTTaGAAACTACAGGCATTGGGGTTAGGGCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HGVIHKYLLRPC*KLQALGLGLQG Trigger: GCCTTGCAGCCCTAACCCCAATGCCTGTAGTTTCCAACATGGCCTCAGCAGATATTTGTGAATAACACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | CACCGCGTCCCTGAGCTTTCGAAAGAGATCATTCTCTaGGTATTTCCTATCCTCAGCATCTTCCAGCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: HRVPELSKEIIL*VFPILSIFQHY Trigger: GTAATGCTGGAAGATGCTGAGGATAGGAAATACCCAGAGAATGATCTCTTTCGAAAGCTCAGGGACGCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAAAGGCTGGAATGTTCTaGGCTTCATTCACAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: VPRSCLQADLSLLFPSFRKAGMF*ASFTIF Trigger: AAATATTGTGAATGAAGCCAAGAACATTCCAGCCTT...TCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR TCA 72 bp | TTGTTCTGCATGGGGCAAGAGCACAAATCAGTTGGATaGTACAGACATACAAGTCGCTCCGGATTACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LFCMGQEHKSVG*YRHTSRSGLQE Trigger: CTCCTGTAATCCGGAGCGACTTGTATGTCTGTATCATCCAACTGATTTGTGCTCTTGCCCCATGCAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR TCA 72 bp | CAGATTCTGTGTTTTTGCTTTTTGCTCAGAAGCAGCTaGGCCACAGAACCACAGGTCTCAGCTTCTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: QILCFCFLLRSS*ATEPQVSASFT Trigger: GGTGAAAGAAGCTGAGACCTGTGGTTCTGTGGCTCAGCTGCTTCTGAGCAAAAAGCAAAAACACAGAATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR TCA 72 bp | GGGGTTTCATCCATCATGGCCTCCTGGGCACGTTCATaGAATTCTTCTACATCATCCAGCAGATTCTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GVSSIMASWARS*NSSTSSSRFCV Trigger: AACACAGAATCTGCTGGATGATGTAGAAGAATTTCATGAACGTGCCCAGGAGGCCATGATGGATGAAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR GCA 72 bp | CTTTGGAAACAACATTCTGAGTGGTCGGAACCACTCTaGTTGATGAGTAAGGTCTCAATGTGGTCCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWKQHSEWSEPL*LMSKVSMWSTS Trigger: GGAAGTGGACCACATTGAGACCTTACTCATCAAGCAGAGTGGTTCCGACCACTCAGAATGTTGTTTCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | ACAAAACATTCAGCACTGACTAGAATAAGACCAAGCTaGCCAACAGACAGGGACAAGTCCCAACATGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TKHSALTRIRPS*PTDRDKSQHGG Trigger: TCCTCCATGTTGGGACTTGTCCCTGTCTGTTGGGCAGCTTGGTCTTATTCTAGTCAGTGCTGAATGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | TCAGAAGATGACAGGCAGCTATTCACAGGTACAGACTaGCTATGTCTGAGGTCTCCAACAGACAAACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SEDDRQLFTGTD*LCLRSPTDKHC Trigger: ACAGTGTTTGTCTGTTGGAGACCTCAGACATAGGCAGTCTGTACCTGTGAATAGCTGCCTGTCATCTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | TTTTCTAAATTTGCCATACTGTGCCGAGGTCTTGCTTaGAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSKFAILCRGLA*RQTLAFSSHRS Trigger: TGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAGTATGGCAAATTTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR CCA 72 bp | TCTCCTCTGACCTTGGAAGCTAAGCAGGGCCAAGCCTaGTTAGCACTTGGGATAAAGGGTTTTGTAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPLTLEAKQGQA*LALGIKGFVRK Trigger: TTTTCTTACAAAACCCTTTATCCCAAGTGCTAACCAGGCTTGGCCCTGCTTAGCTTCCAAGGTCAGAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATACAACAAGTATCAGTaGGTCGAAAGCCACTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RRSWKGREGLVKSHPSLRYNKYQ*VESHFL Trigger: TAAGAAGTGGCTTTCGACCAACTGATACTTGTTGTA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATGTTATCTGCCAGTCTaGCTCATGGCCATGCGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLEQIARVSRAIQAEQRVCYLPV*LMAMRE Trigger: TTCACGCATGGCCATGAGCAAGACTGGCAGATAACA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | TTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTAGCACCTGTAACAATATGAGAGTCAACTCTTaGCATACCATGGCAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPLPYTPMSVRGLSTCNNMRVNS*HTMAAS Trigger: GCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCAT...ATTGTTACAGGTGCTAAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR TCA 72 bp | ACTAAGAAAAACAAATTGACATTTCTTGGACCCTGTTaGGGACCAAAGGCGGAGCTGGAAAGGAAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKKNKLTFLGPC*GPKAELERKGR Trigger: CCTTCCCTTCCTTTCCAGCTCCGCCTTTGGTCCTCAACAGGGTCCAAGAAATGTCAATTTGTTTTTCTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | AAAGAGCTAGAAAGGGCAAGCACAAAGTCTCGGAGGTaGATATATTCTAAGCTTAGGTTAGCAGAGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KELERASTKSRR*IYSKLRLAEGG Trigger: GCCTCCCTCTGCTAACCTAAGCTTAGAATATATTCACCTCCGAGACTTTGTGCTTGCCCTTTCTAGCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | CCAAGAGATCACATCCAAAGACCTTCTAGGTCTCTGTaGTCTGGCTGGAATACAGACATGCCTTTAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRDHIQRPSRSL*SGWNTDMPLIP Trigger: TGGGATTAAAGGCATGTCTGTATTCCAGCCAGATCACAGAGACCTAGAAGGTCTTTGGATGTGATCTCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | CAACTGATTCTCTCAATCGTGTTTCTTCTTCAGTCATaGGAGTCAACTCTTTGCATACCATGGCAGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QLILSIVFLLQS*ESTLCIPWQPA Trigger: GGCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAACACGATTGAGAGAATCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATCATTGTATAAGATGTaGTGTCCCTTCCCGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLEQIARVSRAIQAEQRVSLYKM*CPFPVH Trigger: GTGCACCGGGAAGGGACACAACATCTTATACAATGA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTCCTGTAGTTCGGCCATaGCTTTTTCTACAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LKLFQVSIVVATLNSFHFPVVRP*LFLQHG Trigger: ACCATGCTGTAGAAAAAGCAATGGCCGAACTACAGG...AAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR GCA 72 bp | GTTCCTCAGGTCATGGGCAATCACAGATTGAATGTTTaGCTCCCAGTTCTTCTAAGTATGCCACACTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPQVMGNHRLNV*LPVLLSMPHCN Trigger: ATTACAGTGTGGCATACTTAGAAGAACTGGGAGGCAAACATTCAATCTGTGATTGCCCATGACCTGAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | CTGAAGTCCATTCATCTTTGGAAACAACATTCTGAGTaGTCGGAACCACTCTGCTTGATGAGTAAGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LKSIHLWKQHSE*SEPLCLMSKVS Trigger: TGAGACCTTACTCATCAAGCAGAGTGGTTCCGACCACTCAGAATGTTGTTTCCAAAGATGAATGGACTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | TCACCACCAATACAAATAATGGGATTGGCTGAGAGTTaGGTGGGGAATCTTGAGCACAGACATAATGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPPIQIMGLAES*VGNLEHRHNGK Trigger: TTTGCCATTATGTCTGTGCTCAAGATTCCCCACCCAACTCTCAGCCAATCCCATTATTTGTATTGGTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | TTTGGAGTTTGGAAGAATCTGGGGTTTCATCCATCATaGCCTCCTGGGCACGTTCATGAAATTCTTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: FGVWKNLGFHPS*PPGHVHEILLH Trigger: ATGTAGAAGAATTTCATGAACGTGCCCAGGAGGCCATGATGGATGAAACCCCAGATTCTTCCAAACTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATGGAAACTACAGGCATaGGGGTTAGGGCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKWKLQA*GLGLQG Trigger: GCCTTGCAGCCCTAACCCCAATGCCTGTAGTTTCCA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACAATGTCTCCTCTGACCTaGGAAGCTAAGCAGGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTMSPLT*EAKQGQ Trigger: TTGGCCCTGCTTAGCTTCCAAGGTCAGAGGAGACAT...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | TTCTGTAACACGATTGACCCAAGTGTCATAGGATTGTaGTCTCACTTTGACACCATAAAGCAGAGATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FCNTIDPSVIGL*SHFDTIKQRWK Trigger: CTTCCATCTCTGCTTTATGGTGTCAAAGTGAGAGCACAATCCTATGACACTTGGGTCAATCGTGTTACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTCTGCTGAGGCCATGTaGGAAACTACAGGCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EIQDTSTATHSNNITGQDSAEAM*ETTGIG Trigger: CCCAATGCCTGTAGTTTCCAACATGGCCTCAGCAGA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATCCATTCTTTCCCTCTaGTGCTATAAATACCACGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLEQIARVSRAIQAEQRVSILSL*CYKYHV Trigger: TACGTGGTATTTATAGCACAAGAGGGAAAGAATGGA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCCAATATTTTCTAAATTaGCCATACTGTGCCGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KLFQVSIVVATLNSFHFSQYFLN*PYCAEV Trigger: GACCTCGGCACAGTATGGCAAATTTAGAAAATATTG...GCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTCGGAACCACTCTGCTaGATGAGTAAGGTCTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: EIQDTSTATHSNNITGQDSEPLC*MSKVSM Trigger: CATTGAGACCTTACTCATCAAGCAGAGTGGTTCCGA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTATGGGCAATCACAGATaGAATGTTTGCCTCCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GNLEHRHNGKQCSKISYSMGNHR*NVCLPV Trigger: AACTGGGAGGCAAACATTCAATCTGTGATTGCCCAT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | CAACAAGTATCAGTTGGTCGAAAGCCACTTCTTATATaGCCCACTAAGCACATCAATGTATTAATGCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QQVSVGRKPLLI*PTKHINVLMPN Trigger: GTTTGGCATTAATACATTGATGTGCTTAGTGGGGCATATAAGAAGTGGCTTTCGACCAACTGATACTTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | CAATTCAATCAAATCTTTCTTATGGTTGAAGCTAGCTaGCAATGCTTCTGTAACACGATTGACCCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QFNQIFLMVEAS*QCFCNTIDPSV Trigger: GACACTTGGGTCAATCGTGTTACAGAAGCATTGTCAGCTAGCTTCAACCATAAGAAAGATTTGATTGAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATCAACGAATCAAGAGTaGAAATACTTGGCTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKSTNQE*KYLAAA Trigger: TGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR GCA 72 bp | CAGTCTCAGACATCAAAGTCCATTCTTTCCCTCTTGTaGTATAAATACCACGTAGTAAATCCATATTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSQTSKSILSLL*YKYHVVNPYSK Trigger: CTTTGAATATGGATTTACTACGTGGTATTTATAGCACAAGAGGGAAAGAATGGACTTTGATGTCTGAGACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CCA 72 bp | ATGAAATCAAGTTACAATTTCTGTAAGGCACAACTGTaGAGTAATTTTAATTCAGAACATGGCTGCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: MKSSYNFCKAQL*SNFNSEHGCSA Trigger: GGCAGAGCAGCCATGTTCTGAATTAAAATTACTCCACAGTTGTGCCTTACAGAAATTGTAACTTGATTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR TCA 72 bp | GTATTCTGGGATTCTATCACTTACATTGTAAATTTCTaGAGGGTTGGTGTACACTCAATTTTAAACCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VFWDSITYIVNF*RVGVHSILNHK Trigger: CTTGTGGTTTAAAATTGAGTGTACACCAACCCTTCAGAAATTTACAATGTAAGTGATAGAATCCCAGAATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCTGGATGTCAGTGCTaGGAACCTCAGCCTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AQYVLSRPVLLLPVTPLEAGCQC*EPQPQL Trigger: AAGTTGAGGCTGAGGTTCTCAGCACTGACATCCAGC...CTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTAACTCTCCAGCACACTaGTTAGTCCTGTACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRPVRSLQARAAATCDSTNSPAH*LVLYTG Trigger: GCCTGTGTACAGGACTAATCAGTGTGCTGGAGAGTT...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTCTCCTCCAGTTGTTCTaGAGCATGAGATGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: VRPVRSLQARAAATCDSTLLQLF*SMRWYT Trigger: GGTGTACCATCTCATGCTGCAGAACAACTGGAGGAG...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATTTGCCATACTGTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCCGGGCACTCGGGCGGTaGCACGAACTCCGCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSKFAILCRGLACRQTLARALGR*HELRRV Trigger: TACGCGGCGGAGTTCGTGCCACCGCCCGAGTGCCCG...GGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAGTATGGCAAATTTAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAAACTCAGCGGGTCTGTaGACTCCTCCCAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPRSCLQADLSLLFPSFRNSAGL*TPPNWA Trigger: AGCCCAGTTGGGAGGAGTTCACAGACCCGCTGAGTT...TCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | TCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTATCTTTTGCTCCTACTaGCAGGCCCACAACTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQYVLSRPVLLLPVTPLIFCSY*QAHNFG Trigger: CCCAAAGTTGTGGGCCTGGCAGTAGGAGCAAAAGAT...AAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACAACTCAGCGGGTCTGTaGACTCCTCCCAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGALALVGAIQVAPHRDNSAGL*TPPNWA Trigger: AGCCCAGTTGGGAGGAGTTCACAGACCCGCTGAGTT...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | TACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAAGGTGTAGTTCTGCATGCTaGACACTGCCGCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: YVLSRPVLLLPVTPLEARCSSAC*TLPLII Trigger: GATGATGAGCGGCAGTGTTCAGCATGCAGAACTACA...CCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCATACACAGGCACACCATaGTCCATGAGCACATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYVLSRPVLLLPVTPLEAYTGTP*SMSTFG Trigger: CCCAAATGTGCTCATGGAGCATGGTGTGCCTGTGTA...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| 3UTR CAA 72 bp | AGCCGTACCACCTGCACGTGTATGTCTCCTCTGACCTaGGAAGCTAAGCAGGGCCAAGCCTGGTTAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTTCTCMSPLT*EAKQGQAWLAL Trigger: AAGTGCTAACCAGGCTTGGCCCTGCTTAGCTTCCAAGGTCAGAGGAGACATACACGTGCAGGTGGTACGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | TACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAAGGTGTGCAAGAACGGACTaGTCCAGAACAGGCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YVLSRPVLLLPVTPLEARCARTD*SRTGML Trigger: TAACATGCCTGTTCTGGAGCAGTCCGTTCTTGCACA...CCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACCCAAGTGTCATAGGATTGTGCTCTCACTTTGACACCATAAAGCAGAGACGGGCACTCGGGCGGTaGCACGAACTCCGCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: IDPSVIGLCSHFDTIKQRRALGR*HELRRV Trigger: TACGCGGCGGAGTTCGTGCCACCGCCCGAGTGCCCG...TCTCTGCTTTATGGTGTCAAAGTGAGAGCACAATCCTATGACACTTGGGTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CCA 90 bp | CATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTACCCAGTTCCTTTTCCTaGCAGATATCCCAAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPAIEPAGALALVGAIQVPSSFS*QISQAA Trigger: AGCCGCTTGGGATATCTGCCAGGAAAAGGAACTGGG...TACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | TCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTTCCCACATAGAGCCATaGCACCTTCATACCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAQYVLSRPVLLLPVTPLSHIEP*HLHTRN Trigger: ATTTCTGGTATGAAGGTGCCATGGCTCTATGTGGGA...AAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAACCATACCATGTCTTTaGCTCGCCCCAATGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYVLSRPVLLLPVTPLEATIPCL*LAPMQV Trigger: TACTTGCATTGGGGCGAGCCAAAGACATGGTATGGT...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACAACTCAGCGGGTCTGTaGACTCCTCCCAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHNSAGL*TPPNWA Trigger: AGCCCAGTTGGGAGGAGTTCACAGACCCGCTGAGTT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAATCTTTTGCTCCTACTaGCAGGCCCACAACTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCRGLACRQTLAFSSHRSIFCSY*QAHNFG Trigger: CCCAAAGTTGTGGGCCTGGCAGTAGGAGCAAAAGAT...TGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | CATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTACTCCTCCAGTTGTTCTaGAGCATGAGATGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: HPAIEPAGALALVGAIQVLLQLF*SMRWYT Trigger: GGTGTACCATCTCATGCTGCAGAACAACTGGAGGAG...TACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | TCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTCTAAGACATTTGTTCTaGATGGGGCAAGAGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAQYVLSRPVLLLPVTPLLRHLF*MGQEHK Trigger: TTTGTGCTCTTGCCCCATGCAGAACAAATGTCTTAG...AAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACCCCAGTTCCTTTTCCTaGCAGATATCCCAAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGALALVGAIQVAPHRDPSSFS*QISQAA Trigger: AGCCGCTTGGGATATCTGCCAGGAAAAGGAACTGGG...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCGCTCTGGGGAAGGCTaGATGTCAGTGCTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHRSGEG*MSVLRT Trigger: GGTTCTCAGCACTGACATCCAGCCTTCCCCAGAGCG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCATCCCACATAGAGCCATaGCACCTTCATACCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYVLSRPVLLLPVTPLEASHIEP*HLHTRN Trigger: ATTTCTGGTATGAAGGTGCCATGGCTCTATGTGGGA...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCAACTCTTTGCATACCATaGCAGCCAGCCCCACATCTA | + |
|
Preference number: 4 (lower is better) Translates to: GKASRRTGIGRPLADRLSTLCIP*QPAPHL Trigger: TAGATGTGGGGCTGGCTGCCATGGTATGCAAAGAGT...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCGGAGGAGGTGGTGCTTaGCCTGGGCTATCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSGGGGA*PGLSGP Trigger: GGGGCCAGATAGCCCAGGCCAAGCACCACCTCCTCC...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GTCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTGGCAACATCTTTCTTTaGCCATCCTTTTTAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRPVRSLQARAAATCDSTGNIFL*PSFLGN Trigger: ATTTCCTAAAAAGGATGGTCAAAGAAAGATGTTGCC...AGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTGATTACAGGAGCATGTaGGAGCTGAGAGAAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: PAIEPAGALALVGAIQVADYRSM*ELRENM Trigger: CATGTTTTCTCTCAGCTCTCACATGCTCCTGTAATC...AGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCACTTTCACCGCGTCCCTaGGCTTTCGAAAGAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSSHRACWSSCFSRGNSLSPRP*AFERDH Trigger: ATGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAG...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACATGCTCTGCACAGAATaGCGGTGCCGTCCACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHMLCTE*RCRPHV Trigger: CACATGTGGACGGCACCGTCATTCTGTGCAGAGCAT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GAACCACAGGTCTCAGCTTCTTTCACCGCGTCCCTGAGCTTTCGAAAGAGATCAGCCGGATTTTGCAGATaGCCGTTTTCTCCGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPQVSASFTASLSFRKRSAGFCR*PFSPQR Trigger: CCTTTGCGGAGAAAACGGGCATCTGCAAAATCCGGC...TGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAGAAGCTGAGACCTGTGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACTACACAGGCACACCATaGTCCATGAGCACATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGALALVGAIQVAPHRDYTGTP*SMSTFG Trigger: CCCAAATGTGCTCATGGAGCATGGTGTGCCTGTGTA...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTACAGCATGGTGAGGTaGCAAGCCTACGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHYSMVR*QAYARV Trigger: GACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CGGCCATTGCTTTTTCTACAGCATGGTGAGGTGCCAAGCCTACGCCAGAGTCAAGGCAAAACAGCCACGTaGTATAGAACAGACCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLLFLQHGEVPSLRQSQGKTAT*YRTDPV Trigger: GACTGGGTCTGTTCTATAGCACGTGGCTGTTTTGCC...TTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACGCTGGATGTCAGTGCTaGGAACCTCAGCCTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHAGCQC*EPQPQL Trigger: AAGTTGAGGCTGAGGTTCTCAGCACTGACATCCAGC...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGTACTTCTCCAGAGTCTaGCTGAGACTTAACTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHPAIEPAGALALVGAIQYFSRV*LRLNSS Trigger: AGACGAGTTAAGTCTCAGTCAGACTCTGGAGAAGTA...CTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTACCAGCCCCAAAAATCTaGAGTTTCTTCAGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPAIEPAGALALVGAIQVPAPKI*SFFSSV Trigger: CACAGAACTGAAGAAACTTCAGATTTTTGGGGCTGG...TACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAAGTTGTTCTGCAGCATaGGATGGTACACCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPRSCLQADLSLLFPSFRSCSAA*DGTPYH Trigger: ATGGTATGGTGTACCATCTCATGCTGCAGAACAACT...TCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCGTACAGGCAACTTCTaGAGGGATACCAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHRTGNF*RDTRSD Trigger: GTCACTCCTGGTATCCCTTCAGAAGTTGCCTGTACG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | TCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTTTTCAAAACCTCCTTTaGTGGCAACAATCTTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SAQYVLSRPVLLLPVTPLFQNLL*WQQSCL Trigger: TAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAA...AAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTAGTTCGGCCATTGCTTTTCGCTCTGGGGAAGGCTaGATGTCAGTGCTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSHRSETVRSSCSSAIAFRSGEG*MSVLRT Trigger: GGTTCTCAGCACTGACATCCAGCCTTCCCCAGAGCG...AAAAGCAATGGCCGAACTACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAACCATACCATGTCTTTaGCTCGCCCCAATGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSSSHRACWSSCFSRGNSTIPCL*LAPMQV Trigger: TACTTGCATTGGGGCGAGCCAAAGACATGGTATGGT...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTCACACTGACGTCCAATaGGCAACCAGTCAGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTLAFSSHRSETVRSSCHTDVQ*ATSQQY Trigger: GTACTGCTGACTGGTTGCCCATTGGACGTCAGTGTG...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAGAGGCTCCAAACTTCTaGGAACCAAAGGGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLREAPNF*EPKGSS Trigger: GGAAGAGCCCTTTGGTTCCCAGAAGTTTGGAGCCTC...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACTGAGGGTGGATGTGTaGCCTGCAAAATCCGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRLRVDV*PAKSAK Trigger: TTTGGCGGATTTTGCAGGCCACACATCCACCCTCAG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCACCAGCCCCAAAAATCTaGAGTTTCTTCAGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSSHRACWSSCFSRGNSPAPKI*SFFSSV Trigger: CACAGAACTGAAGAAACTTCAGATTTTTGGGGCTGG...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAGGCAACATCTTTCTTTaGCCATCCTTTTTAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYVLSRPVLLLPVTPLEAGNIFL*PSFLGN Trigger: ATTTCCTAAAAAGGATGGTCAAAGAAAGATGTTGCC...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACAACTCTCCAGCACACTaGTTAGTCCTGTACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHNSPAH*LVLYTG Trigger: GCCTGTGTACAGGACTAATCAGTGTGCTGGAGAGTT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGAATGAGTTCCTCATGTaGAAAGACACAATGGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLTSSSHRACWSSCFSRNEFLM*KDTMAP Trigger: AGGCGCCATTGTGTCTTTTCACATGAGGAACTCATT...CCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCACACAAATCAGTTGGATaGTACAGACATACAAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCRGLACRQTLAFSSHRSHKSVG*YRHTSR Trigger: GCGACTTGTATGTCTGTATCATCCAACTGATTTGTG...TGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCTTTCACCGCGTCCCTaGGCTTTCGAAAGAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHLSPRP*AFERDH Trigger: ATGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGTCCACATTAATATGTaGAAGAACGGACTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSSHRACWSSCFSRGNSVHINM*KNGLLQ Trigger: CTGGAGCAGTCCGTTCTTGCACATATTAATGTGGAC...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCAGCATTCTGGATCTGCTaGCATCTTGAAAATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKASRRTGIGRPLADRLSAFWIC*HLENEF Trigger: GAACTCATTTTCAAGATGGCAGCAGATCCAGAATGC...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTAGTGTCATAGGATTGTaGTCTCACTTTGACACCATA | + |
|
Preference number: 4 (lower is better) Translates to: PAIEPAGALALVGAIQVASVIGL*SHFDTI Trigger: TATGGTGTCAAAGTGAGAGCACAATCCTATGACACT...AGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAACGGGCACTCGGGCGGTaGCACGAACTCCGCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKRALGR*HELRRV Trigger: TACGCGGCGGAGTTCGTGCCACCGCCCGAGTGCCCG...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGAGGAACCATATGGACTaGCATATTGAAATAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQYVLSRPVLLLPVTPLERNHMD*HIEIIR Trigger: TCTGATTATTTCAATATGCCAGTCCATATGGTTCCT...CTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACCGAGGCTGCTTTCTTaGAGTGCTAGAACCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRPRLLS*SARTLR Trigger: TCTCAAGGTTCTAGCACTCCAAGAAAGCAGCCTCGG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | TGGAAACAACATTCTGAGTGGTCGGAACCACTCTGCTaGATGAGTAAGGTCTCAATGTGGTCCACTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WKQHSEWSEPLC*MSKVSMWSTSP Trigger: GGGGGAAGTGGACCACATTGAGACCTTACTCATCAAGCAGAGTGGTTCCGACCACTCAGAATGTTGTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCCACTTCCTCAGACTTaGTGGGAATCTCTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHPLPQT*WESLHH Trigger: GTGATGAAGAGATTCCCATCAAGTCTGAGGAAGTGG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCGACCAGTCATACTTTaGGGGGATATCCAACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHRPVIL*GDIQHL Trigger: AAGGTGTTGGATATCCCCTCAAAGTATGACTGGTCG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CGGCCATTGCTTTTTCTACAGCATGGTGAGGTGCCAAGCCTACGCCAGAGTCAATCTTACTCTAGTCATTaGCTCAAGTTCATTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLFLQHGEVPSLRQSQSYSSH*LKFIQA Trigger: CGCCTGAATGAACTTGAGGCAATGACTAGAGTAAGA...TTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAGCTGCTCTGAGGGAATaGATGGCTTCAATCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRAALRE*MASISF Trigger: AAAGGAGATTGAAGCCATGCATTCCCTCAGAGCAGC...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACGCCTCCGAGATCTCATaGAAAGAGGGCAAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHASEIS*KEGKGI Trigger: AATTCCTTTGCCCTCTTTGCATGAGATCTCGGAGGC...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTGGCGTGCTTTATCTTaGCAACTCATGGCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHWRALS*QLMARS Trigger: AGAACGTGCCATGAGTTGGCAAGATAAAGCACGCCA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCACAGATTCTGTGTTTTTaGTTTTTGCTCAGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKASRRTGIGRPLADRLSQILCF*FLLRSS Trigger: GCTGCTTCTGAGCAAAAAGCAAAAACACAGAATCTG...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAGCCCATGTCTATTAACATTTGGAGTTTGGAAGAATCTGGGGTTTCATCCCGCTCTGGGGAAGGCTaGATGTCAGTGCTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LEPMSINIWSLEESGVSSRSGEG*MSVLRT Trigger: GGTTCTCAGCACTGACATCCAGCCTTCCCCAGAGCG...GGATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAATAGACATGGGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | TCCGGATTACAGGAGCATGTGAGAGCTGAGAGAAAACATGTAGTTCTGCATGCTCCAGGCCCACAACTTTaGGTCCAGCCCCAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLQEHVRAERKHVVLHAPGPQL*VQPQKS Trigger: AGATTTTTGGGGCTGGACCCAAAGTTGTGGGCCTGG...AGCATGCAGAACTACATGTTTTCTCTCAGCTCTCACATGCTCCTGTAATCCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCTGAGCCACAGAACCACAGGTCTCAGCTTCTTTCACCGCGTCCCTGAGATATTCCTCTTCTTCTaGCAACATCTTTCTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KQLSHRTTGLSFFHRVPEIFLFF*QHLSLT Trigger: GGTCAAAGAAAGATGTTGCCAGAAGAAGAGGAATAT...CTCAGGGACGCGGTGAAAGAAGCTGAGACCTGTGGTTCTGTGGCTCAGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCATTCTGCAGCATGAGATaGTACACCATACCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSSHRACWSSCFSRGNSFCSMR*YTIPCL Trigger: AAGACATGGTATGGTGTACCATCTCATGCTGCAGAA...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACAAACTGCCACCACCATaGCTGTATCTCTTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHKLPPP*LYLLTP Trigger: AGGAGTCAAGAGATACAGCCATGGTGGTGGCAGTTT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACATGAGTTCTTCCAACTaGGCTTTTGCTCCAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHMSSSN*AFAPGD Trigger: GTCTCCTGGAGCAAAAGCCCAGTTGGAAGAACTCAT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | CCATGGTGTTATTCACAAATATCTGCTGAGGCCATGTaGGAAACTACAGGCATTGGGGTTAGGGCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWCYSQISAEAM*ETTGIGVRAAR Trigger: CCTTGCAGCCCTAACCCCAATGCCTGTAGTTTCCAACATGGCCTCAGCAGATATTTGTGAATAACACCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGATTCAATGTAGATCCTTaGAGTTCCCAAAATTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRSCLQADLSLLFPSFRFNVDP*SSQNFA Trigger: GGCAAAATTTTGGGAACTTCAAGGATCTACATTGAA...TCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCAAATTCTTTCATAGTGTaGCTTCAAAAGAGACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKASRRTGIGRPLADRLSNSFIV*LQKRPS Trigger: ACTGGGTCTCTTTTGAAGTCACACTATGAAAGAATT...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCCAGCCCCAAAAATCTaGAGTTTCTTCAGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHPAPKI*SFFSSV Trigger: CACAGAACTGAAGAAACTTCAGATTTTTGGGGCTGG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTAGTTGTTCTGCAGCATaGGATGGTACACCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQTLAFSSHRSETVRSSCSCSAA*DGTPYH Trigger: ATGGTATGGTGTACCATCTCATGCTGCAGAACAACT...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCTGATAGAGTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCAAAGACTTCTTCTTCTaGCATCACGACACCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGSDRVSLTSSSHRACWSKDFFF*HHDTHL Trigger: CAAATGGGTGTCGTGATGTCAGAAGAAGAAGTCTTT...GCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAACTCTATCAGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | CTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGAAGTTCCCAAAATTTTaGCAGTTGATCCAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHPAIEPAGALALVGAIQKFPKF*QLIQEV Trigger: GACTTCTTGGATCAACTGGCAAAATTTTGGGAACTT...CTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCGAGGTCTTGCTTGCAGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAAAGTTCCCAAAATTTTaGCAGTTGATCCAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCRGLACRQTLAFSSHRSKFPKF*QLIQEV Trigger: GACTTCTTGGATCAACTGGCAAAATTTTGGGAACTT...TGAACGATGGGAAGAGAAGGCTAAGGTCTGCCTGCAAGCAAGACCTCGGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCATTTCAAAACCTCCTTTaGTGGCAACAATCTTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GKASRRTGIGRPLADRLSFQNLL*WQQSCL Trigger: TAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAA...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACCTGCATGCTGAACACTaGCGCTCATCATCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALKLFQVSIVVATLNSFHLHAEH*RSSSGT Trigger: TGTTCCTGATGATGAGCGGCAGTGTTCAGCATGCAG...GTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAGAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATATGGAACCAGTCTTTaGAGAGCTCACACTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRYGTSL*RAHTVA Trigger: TGCTACAGTGTGAGCTCTGCAAAGACTGGTTCCATA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCGGGCTCTTCCGAGGCTaGTTTCTTGGAGTGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSGLFRG*FLGVLE Trigger: TTCTAGCACTCCAAGAAAGCAGCCTCGGAAGAGCCC...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CGGCCATTGCTTTTTCTACAGCATGGTGAGGTGCCAAGCCTACGCCAGAGTCAACAAAACCTCCTTTGCTaGCAACAATCTTGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLFLQHGEVPSLRQSQQNLLC*QQSCLK Trigger: CTTTAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTG...TTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACCAAAACCTCCTTTGCTaGCAACAATCTTGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAGALALVGAIQVAPHRDQNLLC*QQSCLK Trigger: CTTTAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTG...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGATATTCCTCTTCTTCTaGCAACATCTTTCTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LHPAIEPAGALALVGAIQIFLFF*QHLSLT Trigger: GGTCAAAGAAAGATGTTGCCAGAAGAAGAGGAATAT...CTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTCCCACATAGAGCCATaGCACCTTCATACCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHSHIEP*HLHTRN Trigger: ATTTCTGGTATGAAGGTGCCATGGCTCTATGTGGGA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACAAAGAGATCATTCTCTaGGTATTTCCTATCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAGALALVGAIQVAPHRDKEIIL*VFPILS Trigger: GCTGAGGATAGGAAATACCCAGAGAATGATCTCTTT...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCGGCCTTTGGCAGTTTTaGGCTGCACACACAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSGLWQF*AAHTAF Trigger: GAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCC...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAAGGTGGTGCTTGGCCTaGGCTATCTGGCCCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQRWCLA*AIWPLL Trigger: AAGCAGGGGCCAGATAGCCCAGGCCAAGCACCACCT...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAAAAGACTTCTTCTTCTaGCATCACGACACCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRKDFFF*HHDTHL Trigger: CAAATGGGTGTCGTGATGTCAGAAGAAGAAGTCTTT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTACTAGGTTGGCTGCTCTaGGGGAATGCATGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEQIARVSRAIQAEQRVLGWLL*GNAWLQ Trigger: TTGAAGCCATGCATTCCCTCAGAGCAGCCAACCTAG...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTGCCGGATTTTGCAGATaGCCGTTTTCTCCGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLFQVSIVVATLNSFHFAGFCR*PFSPQR Trigger: CCTTTGCGGAGAAAACGGGCATCTGCAAAATCCGGC...AAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATCTTACTCTAGTCATTaGCTCAAGTTCATTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRSYSSH*LKFIQA Trigger: CGCCTGAATGAACTTGAGGCAATGACTAGAGTAAGA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGTGCTGGCAACAATCTTaGTTAAAGCATACAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLTSSSHRACWSSCFSRCWQQS*LKHTNP Trigger: TGGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCA...CCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCCTCCTCCAGTTGTTCTaGAGCATGAGATGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSLLQLF*SMRWYT Trigger: GGTGTACCATCTCATGCTGCAGAACAACTGGAGGAG...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCTAAGACATTTGTTCTaGATGGGGCAAGAGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHLRHLF*MGQEHK Trigger: TTTGTGCTCTTGCCCCATGCAGAACAAATGTCTTAG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACCACTATCTGAGCTCTaGCTGTGTTTTTGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRPLSEL*LCFCFL Trigger: CAAAAAGCAAAAACACAGGCAGAGCTCAGATAGTGG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCATCATCAGACTCCTCTaGCCCCGACCAGTCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSIIRLL*PRPVIL Trigger: AAGTATGACTGGTCGGGGGCAGAGGAGTCTGATGAT...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTAGTTCGGCCATTGCTTTTTACTTCACAGGCAAATaGAGGTTGCCAATCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRSETVRSSCSSAIAFYFTGK*RLPILG Trigger: CCCAAGGATTGGCAACCTCCATTTGCCTGTGAAGTA...AAAAGCAATGGCCGAACTACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTCCAGGCCCACAACTTTaGGTCCAGCCCCAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKLFQVSIVVATLNSFHFPGPQL*VQPQKS Trigger: AGATTTTTGGGGCTGGACCCAAAGTTGTGGGCCTGG...AAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGCATCAAGACGCACAGGGATAGGGCGTCCTTTAGCAGATAGGCTCTCAAGGAACCATATGGACTaGCATATTGAAATAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKASRRTGIGRPLADRLSRNHMD*HIEIIR Trigger: TCTGATTATTTCAATATGCCAGTCCATATGGTTCCT...TGAGAGCCTATCTGCTAAAGGACGCCCTATCCCTGTGCGTCTTGATGCCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | CGGCCATTGCTTTTTCTACAGCATGGTGAGGTGCCAAGCCTACGCCAGAGTCAAAGAGCACAAATCAGTTaGATGATACAGACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLFLQHGEVPSLRQSQRAQIS*MIQTYK Trigger: CTTGTATGTCTGTATCATCCAACTGATTTGTGCTCT...TTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTTGGCAGCTGCTTTTTaGAGTTCTGCACTGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHLAAAF*SSALII Trigger: GATTATCAGTGCAGAACTCCAAAAAGCAGCTGCCAA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATTAAAAGCAGACTGCTaGAAACTAGGTAAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRLKADC*KLGKCP Trigger: GGGACACTTACCTAGTTTCCAGCAGTCTGCTTTTAA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATCCTTACACGGCCTTTaGCAGTTTTGGGCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEQIARVSRAIQAEQRVSLHGL*QFWAAH Trigger: GTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | GTCTGCCATGTTCCTCAGGTCATGGGCAATCACAGATaGAATGTTTGCCTCCCAGTTCTTCTAAGTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCHVPQVMGNHR*NVCLPVLLSMP Trigger: TGGCATACTTAGAAGAACTGGGAGGCAAACATTCAATCTGTGATTGCCCATGACCTGAGGAACATGGCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCTGATAGAGTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCAATTCTTTCATAGTGTaGCTTCAAAAGAGACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGSDRVSLTSSSHRACWSNSFIV*LQKRPS Trigger: ACTGGGTCTCTTTTGAAGTCACACTATGAAAGAATT...GCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAACTCTATCAGATCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | TTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTAGCACCTGTAACAATAACTCTCCAGCACACTaGTTAGTCCTGTACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPYTPMSVRGLSTCNNNSPAH*LVLYTG Trigger: GCCTGTGTACAGGACTAATCAGTGTGCTGGAGAGTT...ATTGTTACAGGTGCTAAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTAGTTCGGCCATTGCTTTTATGGTTGAAGCTAGCTaGCAATGCTTCTGTAACACG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRSETVRSSCSSAIAFMVEAS*QCFCNT Trigger: CGTGTTACAGAAGCATTGTCAGCTAGCTTCAACCAT...AAAAGCAATGGCCGAACTACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAATCTTTTGCTCCTACTaGCAGGCCCACAACTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLEQIARVSRAIQAEQRVIFCSY*QAHNFG Trigger: CCCAAAGTTGTGGGCCTGGCAGTAGGAGCAAAAGAT...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | TCCGGATTACAGGAGCATGTGAGAGCTGAGAGAAAACATGTAGTTCTGCATGCTGTCCACATTAATATGTaGAAGAACGGACTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLQEHVRAERKHVVLHAVHINM*KNGLLQ Trigger: CTGGAGCAGTCCGTTCTTGCACATATTAATGTGGAC...AGCATGCAGAACTACATGTTTTCTCTCAGCTCTCACATGCTCCTGTAATCCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCAAAACCTCCTTTGCTaGCAACAATCTTGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHQNLLC*QQSCLK Trigger: CTTTAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCAGGACAGTTCATCTGTaGCTAAAGCTTGGCGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSRTVHL*LKLGVL Trigger: AAGCACGCCAAGCTTTAGCCACAGATGAACTGTCCT...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | AGCAAACCACACTCAACGAATCAAGAGTTGAAATACTaGGCTGCTGCACCAAAGAAGACATCCTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SKPHSTNQELKY*AAAPKKTSSAQ Trigger: CTGTGCAGAGGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTGTGGTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | AATCGTGTTTCTTCTTCAGTCATGAGAGTCAACTCTTaGCATACCATGGCAGCCAGCCCCACATCTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRVSSSVMRVNS*HTMAASPTSKH Trigger: ATGCTTAGATGTGGGGCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAACACGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| 3UTR CAA 72 bp | GACATTTGTTCTGCATGGGGCAAGAGCACAAATCAGTaGGATGATACAGACATACAAGTCGCTCCGGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: DICSAWGKSTNQ*DDTDIQVAPDY Trigger: GTAATCCGGAGCGACTTGTATGTCTGTATCATCCAACTGATTTGTGCTCTTGCCCCATGCAGAACAAATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR TCA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTTTCAATGTAGATCCTTaGAGTTCCCAAAATTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQTLAFSSHRSETVRSSCFNVDP*SSQNFA Trigger: GGCAAAATTTTGGGAACTTCAAGGATCTACATTGAA...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GATAGAGTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTTTTCTTCTTCAGTCATaGGAGTCAACTCTTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DRVSLTSSSHRACWSSCFFLLQS*ESTLCI Trigger: TATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAA...AAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAACTCTATC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCGATTACAGGAGCATGTaGGAGCTGAGAGAAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSDYRSM*ELRENM Trigger: CATGTTTTCTCTCAGCTCTCACATGCTCCTGTAATC...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATGCTGCTGCTACCTGTaGCTCCACTTGAGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKCCCYL*LHLRQG Trigger: GCCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACAAGTTCCCAAAATTTTaGCAGTTGATCCAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHKFPKF*QLIQEV Trigger: GACTTCTTGGATCAACTGGCAAAATTTTGGGAACTT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GCTTTCGAAAGAGATCATTCTCTGGGTATTTCCTATCCTCAGCATCTTCCAGCAATCTTCTTTATCTTTTaGTCCTACTGCCAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFERDHSLGISYPQHLPAIFFIF*SYCQAH Trigger: GTGGGCCTGGCAGTAGGAGCAAAAGATAAAGAAGAT...TGCTGGAAGATGCTGAGGATAGGAAATACCCAGAGAATGATCTCTTTCGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR GCA 90 bp | TTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTAGCACCTGTAACAATTGTGCAAGAACGGACTaGTCCAGAACAGGCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPYTPMSVRGLSTCNNCARTD*SRTGML Trigger: TAACATGCCTGTTCTGGAGCAGTCCGTTCTTGCACA...ATTGTTACAGGTGCTAAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATTGGCAGTTTTGGGCTaGACACACAGCATTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLEQIARVSRAIQAEQRVLAVLG*THSILI Trigger: GATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAACCCAGTTCCTTTTCCTaGCAGATATCCCAAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQPSSFS*QISQAA Trigger: AGCCGCTTGGGATATCTGCCAGGAAAAGGAACTGGG...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAACACACTGACGTCCAATaGGCAACCAGTCAGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQHTDVQ*ATSQQY Trigger: GTACTGCTGACTGGTTGCCCATTGGACGTCAGTGTG...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCCTTCTACTGTCAGTTTaGTCCGAGTCTTCCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSLLLSV*SESSHY Trigger: ATAGTGGGAAGACTCGGACCAAACTGACAGTAGAAG...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCTCTGTGGCTAAAGCTTaGCGTGCTTTATCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSSVAKA*RALSCQ Trigger: TTGGCAAGATAAAGCACGCCAAGCTTTAGCCACAGA...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATTAGCACAGAGAGCTTaGCCAGGGCAGAGGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQLAQRA*PGQRTV Trigger: AACTGTCCTCTGCCCTGGCCAAGCTCTCTGTGCTAA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | CCAGAGAATGAAAAGGAGCCAGAAGTTTGGAACAGATaGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PENEKEPEVWNR*LELAEQFKQSR Trigger: TCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACTTCTGGCTCCTTTTCATTCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | TGCTTCTGTAACACGATTGACCCAAGTGTCATAGGATaGTGCTCTCACTTTGACACCATAAAGCAGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CFCNTIDPSVIG*CSHFDTIKQRW Trigger: CCATCTCTGCTTTATGGTGTCAAAGTGAGAGCACAATCCTATGACACTTGGGTCAATCGTGTTACAGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR TCA 90 bp | TCCACTTTAGCTGTCCATTCACGAGCCTTTTGTAAGGCTTCTTTTAAGGACAACTACTTCTCCAGAGTCTaGCTGAGACTTAACTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: STLAVHSRAFCKASFKDNYFSRV*LRLNSS Trigger: AGACGAGTTAAGTCTCAGTCAGACTCTGGAGAAGTA...GTTGTCCTTAAAAGAAGCCTTACAAAAGGCTCGTGAATGGACAGCTAAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACGCACATTTGGGTTCATaGTGGTTACTAACTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALKLFQVSIVVATLNSFHAHLGS*WLLTDV Trigger: TACATCAGTTAGTAACCATCATGAACCCAAATGTGC...GTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | TCCACTTTAGCTGTCCATTCACGAGCCTTTTGTAAGGCTTCTTTTAAGGACAACGGAGCATGTGAGAGCTaGGAGAAAACATGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STLAVHSRAFCKASFKDNGACES*EKTCSS Trigger: AGAACTACATGTTTTCTCTCAGCTCTCACATGCTCC...GTTGTCCTTAAAAGAAGCCTTACAAAAGGCTCGTGAATGGACAGCTAAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACACATGGCTGTATCTCTTaGCTCCTCCAGTCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTHGCIS*LLQSFL Trigger: GAGGAAGGACTGGAGGAGTCAAGAGATACAGCCATG...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTAGAGCCCATGTCTATTAACATTTGGAGTTTGGAAGAATCTGGGGTTTCATCCATCTTCTTTATCTTTTaGTCCTACTGCCAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEPMSINIWSLEESGVSSIFFIF*SYCQAH Trigger: GTGGGCCTGGCAGTAGGAGCAAAAGATAAAGAAGAT...GGATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAATAGACATGGGCTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATGCTTTTTGGAGTTCTaGACTGATAATCTTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRCFLEF*TDNLFS Trigger: ACTGAAAAGATTATCAGTGCAGAACTCCAAAAAGCA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAATCTGGATTGGCAGCTaGTTTTTGGAGTTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLEQIARVSRAIQAEQRVIWIGS*FLEFCT Trigger: AGTGCAGAACTCCAAAAAGCAGCTGCCAATCCAGAT...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAGGTGGATGTGTGGCCTaGAAAATCCGCCAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQGGCVA*KIRQMC Trigger: ACACATTTGGCGGATTTTGCAGGCCACACATCCACC...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAAGGAACCATATGGACTaGCATATTGAAATAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRRNHMD*HIEIIR Trigger: TCTGATTATTTCAATATGCCAGTCCATATGGTTCCT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCTTTACTTGTCGAGTTTaGCTGATGACACACGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSFTCRV*LMTHGR Trigger: TCTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAA...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTTAACATTTGGAGTTTaGAAGAATCTGGGGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHLTFGV*KNLGFH Trigger: ATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAATGTCTATTAACATTTaGAGTTTGGAAGAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSWKGREGLVKSHPSLRMSINI*SLEESG Trigger: CCCAGATTCTTCCAAACTCCAAATGTTAATAGACAT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAAGACAATTCCAATACTaGAGGCTCCAAACTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLEQIARVSRAIQAEQRVRQFQY*RLQTSG Trigger: CCCAGAAGTTTGGAGCCTCCAGTATTGGAATTGTCT...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | AACCATTTGAAATCACCACCAATACAAATAATGGGATaGGCTGAGAGTTGGGTGGGGAATCTTGAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHLKSPPIQIMG*AESWVGNLEHR Trigger: TCTGTGCTCAAGATTCCCCACCCAACTCTCAGCCAATCCCATTATTTGTATTGGTGGTGATTTCAAATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | AGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCTGTCCATTCACGAGCCAAAATTTTGCCAGTTaGTCCAAGAAGTCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIVVATLNSFHFSCPFTSQNFAS*SKKSNL Trigger: AAGATTGGACTTCTTGGATCAACTGGCAAAATTTTG...GCTCGTGAATGGACAGCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTGGTCTCCAACCATCATaGGTTCTTCCAACTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNLEHRHNGKQCSKISYSGLQPS*VLPTGL Trigger: AAGCCCAGTTGGAAGAACTCATGATGGTTGGAGACC...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAGCCGGATTTTGCAGATaGCCGTTTTCTCCGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKAGFCR*PFSPQR Trigger: CCTTTGCGGAGAAAACGGGCATCTGCAAAATCCGGC...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATGTGCAAGAACGGACTaGTCCAGAACAGGCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQCARTD*SRTGML Trigger: TAACATGCCTGTTCTGGAGCAGTCCGTTCTTGCACA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTCCAGCCATCGAGCCTaGTGGAGCTCTTGCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDSSHRA*WSSCFS Trigger: ACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATGTCAAACACTGCAGTaGTTCTCCTTCCGGCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKCQTLQ*FSFRQP Trigger: CGGTTGCCGGAAGGAGAAGCACTGCAGTGTTTGACA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATCGTTCTGTCAAACACTaGAGTGCTTCTCCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDRSVKH*SASPSG Trigger: GCCGGAAGGAGAAGCACTGCAGTGTTTGACAGAACG...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAACCAGGCCCACAACTTTaGGTCCAGCCCCAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKPGPQL*VQPQKS Trigger: AGATTTTTGGGGCTGGACCCAAAGTTGTGGGCCTGG...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACCATACCATGTCTTTaGCTCGCCCCAATGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQTIPCL*LAPMQV Trigger: TACTTGCATTGGGGCGAGCCAAAGACATGGTATGGT...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATGGGTTTCATCCATCATaGCCTCCTGGGCACGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDGFHPS*PPGHVH Trigger: ATGAACGTGCCCAGGAGGCCATGATGGATGAAACCC...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATGTTCCACCATACGCTaGCTTAGCACAGAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTCSTIR*LSTESL Trigger: CAAGCTCTCTGTGCTAAGCCAGCGTATGGTGGAACA...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCCAAAATTTTGCCAGTTaGTCCAAGAAGTCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSQNFAS*SKKSNL Trigger: AAGATTGGACTTCTTGGATCAACTGGCAAAATTTTG...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATACTTCTCCAGAGTCTaGCTGAGACTTAACTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQYFSRV*LRLNSS Trigger: AGACGAGTTAAGTCTCAGTCAGACTCTGGAGAAGTA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTGTAGTTCTGCATGCTaGACACTGCCGCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDCSSAC*TLPLII Trigger: GATGATGAGCGGCAGTGTTCAGCATGCAGAACTACA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CACTCAACGAATCAAGAGTTGAAATACTTGGCTGCTGCACCAAAGAAGACATCCTGCTGGCAACAATCTTaGTTAAAGCATACAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTNQELKYLAAAPKKTSCWQQS*LKHTNP Trigger: TGGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCA...GGATGTCTTCTTTGGTGCAGCAGCCAAGTATTTCAACTCTTGATTCGTTGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAGTCCACATTAATATGTaGAAGAACGGACTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQVHINM*KNGLLQ Trigger: CTGGAGCAGTCCGTTCTTGCACATATTAATGTGGAC...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTACACAGGCACACCATaGTCCATGAGCACATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDYTGTP*SMSTFG Trigger: CCCAAATGTGCTCATGGAGCATGGTGTGCCTGTGTA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAACTGCATGCTGAACACTaGCGCTCATCATCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKLHAEH*RSSSGT Trigger: TGTTCCTGATGATGAGCGGCAGTGTTCAGCATGCAG...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATACTTCACAGGCAAATaGAGGTTGCCAATCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTYFTGK*RLPILG Trigger: CCCAAGGATTGGCAACCTCCATTTGCCTGTGAAGTA...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CATACAAGTCGCTCCGGATTACAGGAGCATGTGAGAGCTGAGAGAAAACATGTATCTTGTTCTCTTTGGTaGAATATTCATTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTSRSGLQEHVRAERKHVSCSLW*NIHSCS Trigger: GGAACAAGAATGAATATTCCACCAAAGAGAACAAGA...TACATGTTTTCTCTCAGCTCTCACATGCTCCTGTAATCCGGAGCGACTTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CCA 90 bp | AGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCTGTCCATTCACGAGCTCTTGTTCTCTTTGGTaGAATATTCATTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIVVATLNSFHFSCPFTSSCSLW*NIHSCS Trigger: GGAACAAGAATGAATATTCCACCAAAGAGAACAAGA...GCTCGTGAATGGACAGCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATACTCTTTGCATACCATaGCAGCCAGCCCCACATCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDTLCIP*QPAPHL Trigger: TAGATGTGGGGCTGGCTGCCATGGTATGCAAAGAGT...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACAAGTTGTTCTGCAGCATaGGATGGTACACCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTSCSAA*DGTPYH Trigger: ATGGTATGGTGTACCATCTCATGCTGCAGAACAACT...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCTCCTGTTTTTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTGCACATTTGGGTTCATaGTGGTTACTAACTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFLLFLPLPYTPMSVRGLAHLGS*WLLTDV Trigger: TACATCAGTTAGTAACCATCATGAACCCAAATGTGC...AAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAAAAACAGGAGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR TCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACAATGGTTGAAGCTAGCTaGCAATGCTTCTGTAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTMVEAS*QCFCNT Trigger: CGTGTTACAGAAGCATTGTCAGCTAGCTTCAACCAT...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATTTGCTCTCGTTCTTTaGAAACTGCCACCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKFALVL*KLPPPW Trigger: CCATGGTGGTGGCAGTTTTCAAAGAACGAGAGCAAA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTTGCTGGCAACAATCTTaGTTAAAGCATACAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKLFQVSIVVATLNSFHFCWQQS*LKHTNP Trigger: TGGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCA...AAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR GCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTATCTTCTTTATCTTTTaGTCCTACTGCCAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNLEHRHNGKQCSKISYSIFFIF*SYCQAH Trigger: GTGGGCCTGGCAGTAGGAGCAAAAGATAAAGAAGAT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATTCCAACTGGGCTTTTaGTCCAGGAGACAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTFQLGF*SRRQFQ Trigger: TTGGAATTGTCTCCTGGAGCAAAAGCCCAGTTGGAA...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAAATGAGTTCCTCATGTaGAAAGACACAATGGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKNEFLM*KDTMAP Trigger: AGGCGCCATTGTGTCTTTTCACATGAGGAACTCATT...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATGGAGCATGTGAGAGCTaGGAGAAAACATGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDGACES*EKTCSS Trigger: AGAACTACATGTTTTCTCTCAGCTCTCACATGCTCC...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATGGAGTGCTAGAACCTTaGGAACAACTCTTTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDGVLEP*EQLFEA Trigger: TGCTTCAAAGAGTTGTTCTCAAGGTTCTAGCACTCC...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATCGTTCTTTGAAAACTaGCACCACCATGGCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKSFFEN*HHHGCI Trigger: GATACAGCCATGGTGGTGGCAGTTTTCAAAGAACGA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACACGGTTAAAAGCAGACTaGTGGAAACTAGGTAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTRLKAD*WKLGKC Trigger: ACACTTACCTAGTTTCCAGCAGTCTGCTTTTAACCG...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATGCAGAAGAATATGCATaGTCTGCACAGAATGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDAEEYA*SAQNDG Trigger: ACCGTCATTCTGTGCAGAGCATGCATATTCTTCTGC...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATGGCCCCTGCTTCTTTaGACAGTTTATACAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTWPLLL*TVYTDV Trigger: TACATCTGTATAAACTGTGCAAAGAAGCAGGGGCCA...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATTCTGCAGCATGAGATaGTACACCATACCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTFCSMR*YTIPCL Trigger: AAGACATGGTATGGTGTACCATCTCATGCTGCAGAA...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAGAGTTTGGAAGAATCTaGGGTTTCATCCATCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKEFGRI*GFIHHG Trigger: GCCATGATGGATGAAACCCCAGATTCTTCCAAACTC...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTTATCTTGCCAACTCATaGCACGTTCTGTCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: GNLEHRHNGKQCSKISYSYLANS*HVLSNT Trigger: AGTGTTTGACAGAACGTGCCATGAGTTGGCAAGATA...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACACCTGTAAATCTGGATTaGCAGCTGCTTTTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTPVNLD*QLLFGV Trigger: AACTCCAAAAAGCAGCTGCCAATCCAGATTTACAGG...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATTCAATGTAGATCCTTaGAGTTCCCAAAATTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQFNVDP*SSQNFA Trigger: GGCAAAATTTTGGGAACTTCAAGGATCTACATTGAA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAGGCAACATCTTTCTTTaGCCATCCTTTTTAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQGNIFL*PSFLGN Trigger: ATTTCCTAAAAAGGATGGTCAAAGAAAGATGTTGCC...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTGCACATTTGGGTTCATaGTGGTTACTAACTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNLEHRHNGKQCSKISYSAHLGS*WLLTDV Trigger: TACATCAGTTAGTAACCATCATGAACCCAAATGTGC...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATCACAAATCAGTTGGATaGTACAGACATACAAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDHKSVG*YRHTSR Trigger: GCGACTTGTATGTCTGTATCATCCAACTGATTTGTG...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATCTTTTTCTGGGAACTTaGTTTAGGAAGGGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDLFLGT*FRKGNT Trigger: TGTGTTCCCCTTCCTAAATCAAGTTCCCAGAAAAAG...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATGCATTCTGGATCTGCTaGCATCTTGAAAATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDAFWIC*HLENEF Trigger: GAACTCATTTTCAAGATGGCAGCAGATCCAGAATGC...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACAAGTGTCATAGGATTGTaGTCTCACTTTGACACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTSVIGL*SHFDTI Trigger: TATGGTGTCAAAGTGAGAGCACAATCCTATGACACT...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAATTTCACTTCTTCTATaGGCTCCACAATTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQISLLL*APQLSS Trigger: AGATGACAATTGTGGAGCGCATAGAAGAAGTGAAAT...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAAGACTAACAAGTTGTTaGACAAAGGCCTTCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQRLTSC*TKAFNS Trigger: AGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCT...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | TGTTTAGGTGAGAATGAAGAAGGAAGTGCTAACTCCTaGTACTACAAGGAAGGAATGGGATTTCTTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLGENEEGSANS*YYKEGMGFLYQ Trigger: TTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAGCACTTCCTTCTTCATTCTCACCTAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| 3UTR CAA 72 bp | GTTGAGTCATCTTTCCACCCCCTCCCTTATGGTCTTTaGAGTTTTTGTCTAAATCTATGGTTAAGATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VESSFHPLPYGL*SFCLNLWLRYQ Trigger: TTGATATCTTAACCATAGATTTAGACAAAAACTCAAAAGACCATAAGGGAGGGGGTGGAAAGATGACTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATTGCTATCATCCTCCATaGTATGTAAGAATCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDCYHPP*YVRICP Trigger: AGGACAGATTCTTACATATCATGGAGGATGATAGCA...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATAAAGAGATCATTCTCTaGGTATTTCCTATCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDKEIIL*VFPILS Trigger: GCTGAGGATAGGAAATACCCAGAGAATGATCTCTTT...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATAATTCTTTCATAGTGTaGCTTCAAAAGAGACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIQDTSTATHSNNITGQDNSFIV*LQKRPS Trigger: ACTGGGTCTCTTTTGAAGTCACACTATGAAAGAATT...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR TCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATTTCTTCTTCAGTCATaGGAGTCAACTCTTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKFLLQS*ESTLCI Trigger: TATGCAAAGAGTTGACTCTCATGACTGAAGAAGAAA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATTTCAAAACCTCCTTTaGTGGCAACAATCTTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKFQNLL*WQQSCL Trigger: TAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTTCTTGTTCTCTTTGGTaGAATATTCATTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNLEHRHNGKQCSKISYSSCSLW*NIHSCS Trigger: GGAACAAGAATGAATATTCCACCAAAGAGAACAAGA...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAATATTCCTCTTCTTCTaGCAACATCTTTCTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKIFLFF*QHLSLT Trigger: GGTCAAAGAAAGATGTTGCCAGAAGAAGAGGAATAT...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAAAGAGCACAAATCAGTTaGATGATACAGACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKRAQIS*MIQTYK Trigger: CTTGTATGTCTGTATCATCCAACTGATTTGTGCTCT...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CCA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTACCTGTAACAATGTATaGCTGGAATTCTTTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLEHRHNGKQCSKISYSTCNNV*LEFFLR Trigger: CCTTAAAAAGAATTCCAGCCATACATTGTTACAGGT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | TCCGCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTACAGGCAAATGGAGGTaGCCAATCCTTGGGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAQYVLSRPVLLLPVTPLTGKWR*PILGWP Trigger: CGGCCACCCAAGGATTGGCAACCTCCATTTGCCTGT...AAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS GCA 90 bp | TACCCAGTCTACCTTGTCCTTACACGGCCTTTGGCAGTTTTGGGCTaGACACACAGCATTCTCATCATCAGACTCCTCTGCCCCCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: YPVYLVLTRPLAVLG*THSILIIRLLCPRP Trigger: TGGTCGGGGGCAGAGGAGTCTGATGATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGACAAGGTAGACTGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGCACCATACCATGTCTTaGGCTCGCCCCAATGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHPAIEPAGALALVGAIQHHTMS*ARPNAS Trigger: ACTTGCATTGGGGCGAGCCAAAGACATGGTATGGTG...CTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAACCGCTTCGGCAAAGTaGTATCCCTGGTTAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QYVLSRPVLLLPVTPLEATASAK*YPWLNP Trigger: TGGATTTAACCAGGGATACAACTTTGCCGAAGCGGT...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS CCA 90 bp | GGCTTAGCACAGAGAGCTTGGCCAGGGCAGAGGACAGTTCATCTGTaGCTAAAGCTTGGCGTGCTTTATCTTGCCAACTCATGGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLAQRAWPGQRTVHL*LKLGVLYLANSWHV Trigger: AACGTGCCATGAGTTGGCAAGATAAAGCACGCCAAGCTTTAGCCACAGATGAACTGTCCTCTGCCCTGGCCAAGCTCTCTGTGCTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAACAGGCAAATGGAGGTaGCCAATCCTTGGGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRSWKGREGLVKSHPSLRTGKWR*PILGWP Trigger: CGGCCACCCAAGGATTGGCAACCTCCATTTGCCTGT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCACACCATACCATGTCTTaGGCTCGCCCCAATGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TSSSHRACWSSCFSRGNSHHTMS*ARPNAS Trigger: ACTTGCATTGGGGCGAGCCAAAGACATGGTATGGTG...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | CGGCCATTGCTTTTTCTACAGCATGGTGAGGTGCCAAGCCTACGCCAGAGTCAACATCACCTCCTCCAGTaGTTCTGCAGCATGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLLFLQHGEVPSLRQSQHHLLQ*FCSMRW Trigger: CCATCTCATGCTGCAGAACAACTGGAGGAGGTGATG...TTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS TCA 90 bp | AAACACTGCAGTGCTTCTCCTTCCGGCAACCGTACAGGCAACTTCTaGAGGGATACCAGGAGTGACAGAATAGTCTCTAGCCTTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KHCSASPSGNRTGNF*RDTRSDRIVSSLGL Trigger: GAGGCCAAGGCTAGAGACTATTCTGTCACTCCTGGTATCCCTTCAGAAGTTGCCTGTACGGTTGCCGGAAGGAGAAGCACTGCAGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 90 bp | AGCATTCTCATCATCAGACTCCTCTGCCCCCGACCAGTCATACTTTaGGGGGATATCCAACACCTTCCTCTCCCGTTTCTTCTCCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SILIIRLLCPRPVIL*GDIQHLPLPFLLRA Trigger: AGCACGGAGAAGAAACGGGAGAGGAAGGTGTTGGATATCCCCTCAAAGTATGACTGGTCGGGGGCAGAGGAGTCTGATGATGAGAATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | GAGAGCTTGGCCAGGGCAGAGGACAGTTCATCTGTGGCTAAAGCTTaGCGTGCTTTATCTTGCCAACTCATGGCACGTTCTGTCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ESLARAEDSSSVAKA*RALSCQLMARSVKH Trigger: GTGTTTGACAGAACGTGCCATGAGTTGGCAAGATAAAGCACGCCAAGCTTTAGCCACAGATGAACTGTCCTCTGCCCTGGCCAAGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | GAGTTCTTCCAACTGGGCTTTTGCTCCAGGAGACAATTCCAATACTaGAGGCTCCAAACTTCTGGGAACCAAAGGGCTCTTCCGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EFFQLGFCSRRQFQY*RLQTSGNQRALPRL Trigger: CAGCCTCGGAAGAGCCCTTTGGTTCCCAGAAGTTTGGAGCCTCCAGTATTGGAATTGTCTCCTGGAGCAAAAGCCCAGTTGGAAGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTTTGGGTGGCCGGATTTaGCAGATGCCCGTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQTLAFSSHRSETVRSSCLGGRI*QMPVFS Trigger: GGAGAAAACGGGCATCTGCAAAATCCGGCCACCCAA...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGATTTCAAAACCTCCTTaGCTGGCAACAATCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQYVLSRPVLLLPVTPLEISKPP*LATILL Trigger: AAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAAT...CTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGATGAGAGTCAACTCTTaGCATACCATGGCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLTSSSHRACWSSCFSRMRVNS*HTMAAS Trigger: GCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCAT...CCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCGGCCTTTGGCAGTTTaGGGCTGCACACACAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHRPLAV*GCTHSI Trigger: AATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | GTTCATCTGTGGCTAAAGCTTGGCGTGCTTTATCTTGCCAACTCATaGCACGTTCTGTCAAACACTGCAGTGCTTCTCCTTCCGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VHLWLKLGVLYLANS*HVLSNTAVLLLPAT Trigger: GGTTGCCGGAAGGAGAAGCACTGCAGTGTTTGACAGAACGTGCCATGAGTTGGCAAGATAAAGCACGCCAAGCTTTAGCCACAGATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CAGTACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCACCAAAATTTTGCCAGTaGATCCAAGAAGTCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: QYVLSRPVLLLPVTPLEAPKFCQ*IQEVQS Trigger: AGATTGGACTTCTTGGATCAACTGGCAAAATTTTGG...TGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | TACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAAGGGAGAGTTCCTTTCCGTaGTCTCATTTGCATGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YVLSRPVLLLPVTPLEARESSFP*SHLHVK Trigger: TTTAACATGCAAATGAGACAACGGAAAGGAACTCTC...CCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCACCATACCATGTCTTaGGCTCGCCCCAATGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHHHTMS*ARPNAS Trigger: ACTTGCATTGGGGCGAGCCAAAGACATGGTATGGTG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGGCAGACCTTAGCCTTCTCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTCATCACCTCCTCCAGTaGTTCTGCAGCATGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RQTLAFSSHRSETVRSSCHHLLQ*FCSMRW Trigger: CCATCTCATGCTGCAGAACAACTGGAGGAGGTGATG...ACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGAGAAGGCTAAGGTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGATTCACAAGCTCCACTTaGGCGGCAGCAGCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSWKGREGLVKSHPSLRFTSST*AAAAFS Trigger: AGAAAAGGCTGCTGCCGCCAAAGTGGAGCTTGTGAA...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTGCAGATTCTGTGTTTTaGCTTTTTGCTCAGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAIEPAGALALVGAIQVAADSVF*LFAQKQ Trigger: CTGCTTCTGAGCAAAAAGCAAAAACACAGAATCTGC...AGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS GCA 90 bp | TGCTTTATCTTGCCAACTCATGGCACGTTCTGTCAAACACTGCAGTaGTTCTCCTTCCGGCAACCGTACAGGCAACTTCTGAAGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: CFILPTHGTFCQTLQ*FSFRQPYRQLLKGY Trigger: GTATCCCTTCAGAAGTTGCCTGTACGGTTGCCGGAAGGAGAAGCACTGCAGTGTTTGACAGAACGTGCCATGAGTTGGCAAGATAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | TACGTTCTCTCCAGGCCCGTGCTGCTGCTACCTGTGACTCCACTTGAGGCAAGGCTTCAATGTAGATCCTaGAAGTTCCCAAAATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YVLSRPVLLLPVTPLEARLQCRS*KFPKFC Trigger: GCAAAATTTTGGGAACTTCAAGGATCTACATTGAAG...CCTTGCCTCAAGTGGAGTCACAGGTAGCAGCAGCACGGGCCTGGAGAGAACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACATGAGAGTCAACTCTTaGCATACCATGGCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHMRVNS*HTMAAS Trigger: GCTGGCTGCCATGGTATGCAAAGAGTTGACTCTCAT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCTATGCGCTCCACAATaGTCATCTTGGCTAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHLCAPQ*SSWLGW Trigger: CCAACCTAGCCAAGATGACAATTGTGGAGCGCATAG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 90 bp | CGCTCCACAATTGTCATCTTGGCTAGGTTGGCTGCTCTGAGGGAATaGATGGCTTCAATCTCCTTTTGCTCTCGTTCTTTGAAAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTIVILARLAALRE*MASISFCSRSLKTA Trigger: GGCAGTTTTCAAAGAACGAGAGCAAAAGGAGATTGAAGCCATGCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGACAATTGTGGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGTTGCTGGCAACAATCTaGCTTAAAGCATACAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LHPAIEPAGALALVGAIQLLATI*LKAYKS Trigger: GGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCAA...CTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCATCCAGCCATCGAGCCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAAAGGCTGACACCAGATaGGAAAAGTTCATATGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TSSSHRACWSSCFSRGNSKADTR*EKFIWV Trigger: TACCCATATGAACTTTTCCAATCTGGTGTCAGCCTT...TGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGGCTCGATGGCTGGATGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACCTTTACTTGTCGAGTTaGGCTGATGACACACGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHLYLSS*ADDTRK Trigger: CTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAAG...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTTTTTCTCTAGCTGCTaGTTCCACCATACGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHFFSSC*FHHTLA Trigger: AGCCAGCGTATGGTGGAACAAGCAGCTAGAGAAAAA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | AGAGACACTTCTAGGAGGTCTCCAACCATCATGAGTTCTTCCAACTaGGCTTTTGCTCCAGGAGACAATTCCAATACTGGAGGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDTSRRSPTIMSSSN*AFAPGDNSNTGGSK Trigger: TTTGGAGCCTCCAGTATTGGAATTGTCTCCTGGAGCAAAAGCCCAGTTGGAAGAACTCATGATGGTTGGAGACCTCCTAGAAGTGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | TCCTCTCCCGTTTCTTCTCCGTGCTCTCTTTCACAAGCTCCACTTTaGCGGCAGCAGCCTTTTCTTTCTTTTTCTTTCGCTCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPVSSPCSLSQAPL*RQQPFLSFSFALLL Trigger: AAGAAGAAGAGCGAAAGAAAAAGAAAGAAAAGGCTGCTGCCGCCAAAGTGGAGCTTGTGAAAGAGAGCACGGAGAAGAAACGGGAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCTTGGGTGGCCGGATTTaGCAGATGCCCGTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLFQVSIVVATLNSFHFSLGGRI*QMPVFS Trigger: GGAGAAAACGGGCATCTGCAAAATCCGGCCACCCAA...GCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACTTGCTGGCAACAATCTaGCTTAAAGCATACAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PAGALALVGAIQVAPHRDLLATI*LKAYKS Trigger: GGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCAA...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | CGGCCATTGCTTTTTCTACAGCATGGTGAGGTGCCAAGCCTACGCCAGAGTCAAATTTCAAAACCTCCTTaGCTGGCAACAATCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPLLFLQHGEVPSLRQSQISKPP*LATILL Trigger: AAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAAT...TTGACTCTGGCGTAGGCTTGGCACCTCACCATGCTGTAGAAAAAGCAATGGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACAAGGCTTCTCGAGGTTaGTTACATTCCTCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHKASRG*LHSSAT Trigger: TGTTGCTGAGGAATGTAACAAACCTCGAGAAGCCTT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACCGGTACCTAAGACATTaGTTCTGCATGGGGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALKLFQVSIVVATLNSFHRYLRH*FCMGQE Trigger: CTCTTGCCCCATGCAGAACAAATGTCTTAGGTACCG...GTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACAGCAGATTCTTTACTaGTCGAGTTTGGCTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSWKGREGLVKSHPSLRQQILY*SSLADD Trigger: GTCATCAGCCAAACTCGACAAGTAAAGAATCTGCTG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACAACCCACTGGCTGTCTaGCGGCAAATACAAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHNPLAV*RQIQNF Trigger: GAAATTTTGTATTTGCCGCAAGACAGCCAGTGGGTT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAGTCCTTACACGGCCTTaGGCAGTTTTGGGCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVVLTRP*AVLGCT Trigger: TGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGAC...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 90 bp | GTTGTGTCTCATCCAGAGACACTTCTAGGAGGTCTCCAACCATCATaGGTTCTTCCAACTGGGCTTTTGCTCCAGGAGACAATTCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: VVSHPETLLGGLQPS*VLPTGLLLQETIPI Trigger: TATTGGAATTGTCTCCTGGAGCAAAAGCCCAGTTGGAAGAACTCATGATGGTTGGAGACCTCCTAGAAGTGTCTCTGGATGAGACACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 90 bp | TCCATGATATGTAAGAATCTGTCCTCTGAGGGTGGATGTGTGGCCTaGAAAATCCGCCAAATGTGTTGTGTCTCATCCAGAGACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMICKNLSSEGGCVA*KIRQMCCVSSRDTS Trigger: AGAAGTGTCTCTGGATGAGACACAACACATTTGGCGGATTTTGCAGGCCACACATCCACCCTCAGAGGACAGATTCTTACATATCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGGAGCTCTTGCTTTAGTCGGGGCAATTCAGGTAGCTCCACATAGAGACCTTCAATGTAGATCCTaGAAGTTCCCAAAATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGALALVGAIQVAPHRDLQCRS*KFPKFC Trigger: GCAAAATTTTGGGAACTTCAAGGATCTACATTGAAG...GTCTCTATGTGGAGCTACCTGAATTGCCCCGACTAAAGCAAGAGCTCCAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCTGTCCATTCACGAGCCATCTTCTTTATCTTTaGCTCCTACTGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIVVATLNSFHFSCPFTSHLLYL*LLLPGP Trigger: TGGGCCTGGCAGTAGGAGCAAAAGATAAAGAAGATG...GCTCGTGAATGGACAGCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTACATCACCTCCTCCAGTaGTTCTGCAGCATGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVHHLLQ*FCSMRW Trigger: CCATCTCATGCTGCAGAACAACTGGAGGAGGTGATG...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACTTTAAGGACAACACATaGGGTAGAAAGGCTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHFKDNT*GRKAGM Trigger: CATTCCAGCCTTTCTACCCAATGTGTTGTCCTTAAA...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | ACTTGTCGAGTTTGGCTGATGACACACGGAAGACTAACAAGTTGTTaGACAAAGGCCTTCAATTCTTCTACTGTCAGTTTGGTCCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCRVWLMTHGRLTSC*TKAFNSSTVSLVRV Trigger: GACTCGGACCAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATTGGGTGGCCGGATTTaGCAGATGCCCGTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQLGGRI*QMPVFS Trigger: GGAGAAAACGGGCATCTGCAAAATCCGGCCACCCAA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACGAGAGTTCCTTTCCGTaGTCTCATTTGCATGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHESSFP*SHLHVK Trigger: TTTAACATGCAAATGAGACAACGGAAAGGAACTCTC...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | ACAGATGATAAGAGAATGGAGCCCACACAATCCATGCAGAGAGGAAGCCAGCACATATTCTCTTACAGCTaGCTCAAATCCAAAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TDDKRMEPTQSMQRGSQHIFSYS*LKSKGF Trigger: GAAGCCTTTGGATTTGAGCAAGCTGTAAGAGAATAT...GTGCTGGCTTCCTCTCTGCATGGATTGTGTGGGCTCCATTCTCTTATCATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GAACCACAGGTCTCAGCTTCTTTCACCGCGTCCCTGAGCTTTCGAAAGAGATCATGGCAACATCTTTCTTaGACCATCCTTTTTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EPQVSASFTASLSFRKRSWQHLS*TILFRK Trigger: TTTCCTAAAAAGGATGGTCAAAGAAAGATGTTGCCA...TGATCTCTTTCGAAAGCTCAGGGACGCGGTGAAAGAAGCTGAGACCTGTGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCTGATAGAGTTAGCCTTACTTCATCCAGCCATCGAGCCTGCTGGAGCTGGCAACATCTTTCTTaGACCATCCTTTTTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CGSDRVSLTSSSHRACWSWQHLS*TILFRK Trigger: TTTCCTAAAAAGGATGGTCAAAGAAAGATGTTGCCA...GCTCCAGCAGGCTCGATGGCTGGATGAAGTAAGGCTAACTCTATCAGATCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGACTTCAATGTAGATCCTaGAAGTTCCCAAAATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRSWKGREGLVKSHPSLRLQCRS*KFPKFC Trigger: GCAAAATTTTGGGAACTTCAAGGATCTACATTGAAG...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCCCATGTCTATTAACATTTGGAGTTTGGAAGAATCTGGGGTTTCATCCCATCTTCTTTATCTTTaGCTCCTACTGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LEPMSINIWSLEESGVSSHLLYL*LLLPGP Trigger: TGGGCCTGGCAGTAGGAGCAAAAGATAAAGAAGATG...GGATGAAACCCCAGATTCTTCCAAACTCCAAATGTTAATAGACATGGGCTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | ATTGACCCAAGTGTCATAGGATTGTGCTCTCACTTTGACACCATAAAGCAGAGAACCGCTTCGGCAAAGTaGTATCCCTGGTTAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: IDPSVIGLCSHFDTIKQRTASAK*YPWLNP Trigger: TGGATTTAACCAGGGATACAACTTTGCCGAAGCGGT...TCTCTGCTTTATGGTGTCAAAGTGAGAGCACAATCCTATGACACTTGGGTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CAA 90 bp | TTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTAGCACCTGTAACAATCCAAGTGTCATAGGATaGTGCTCTCACTTTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LPLPYTPMSVRGLSTCNNPSVIG*CSHFDT Trigger: GGTGTCAAAGTGAGAGCACAATCCTATGACACTTGG...ATTGTTACAGGTGCTAAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAGCTGGAAAGGAAGGGAAGGACTTGTGAAATCACATCCATCTCTCAGAAAGGCTGGAATGTTCTaGGCTTCATTCACAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: RRSWKGREGLVKSHPSLRKAGMF*ASFTIF Trigger: AAATATTGTGAATGAAGCCAAGAACATTCCAGCCTT...TCTGAGAGATGGATGTGATTTCACAAGTCCTTCCCTTCCTTTCCAGCTCCGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTGTCATCTTGGCTAGGTaGGCTGCTCTGAGGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GNLEHRHNGKQCSKISYSVILAR*AALREC Trigger: GCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGAC...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 90 bp | AAGTCCAATCTTACTCTAGTCATTGCCTCAAGTTCATTCAGGCGCTaGACTCTAGGAGTGAAACGGAAGGTTTTTACTTCACAGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KSNLTLVIASSSFRR*TLGVKRKVFTSQAN Trigger: ATTTGCCTGTGAAGTAAAAACCTTCCGTTTCACTCCTAGAGTCCAGCGCCTGAATGAACTTGAGGCAATGACTAGAGTAAGATTGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCTGTCCATTCACGAGCCCAAAATTTTGCCAGTaGATCCAAGAAGTCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SIVVATLNSFHFSCPFTSPKFCQ*IQEVQS Trigger: AGATTGGACTTCTTGGATCAACTGGCAAAATTTTGG...GCTCGTGAATGGACAGCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AACACGATTGACCCAAGTGTCATAGGATTGTGCTCTCACTTTGACACCATAAAGAAGGCTTCTCGAGGTTaGTTACATTCCTCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: NTIDPSVIGLCSHFDTIKKASRG*LHSSAT Trigger: TGTTGCTGAGGAATGTAACAAACCTCGAGAAGCCTT...CTTTATGGTGTCAAAGTGAGAGCACAATCCTATGACACTTGGGTCAATCGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132009.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAAGGCTTCTCGAGGTTaGTTACATTCCTCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LKLFQVSIVVATLNSFHFKASRG*LHSSAT Trigger: TGTTGCTGAGGAATGTAACAAACCTCGAGAAGCCTT...AAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTACGGAAGACTAACAAGTaGTTGGACAAAGGCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVRKTNK*LDKGLQ Trigger: TTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCG...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTATTTTGCTCTCGTTCTTaGAAAACTGCCACCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVFCSRS*KTATTM Trigger: CATGGTGGTGGCAGTTTTCAAAGAACGAGAGCAAAA...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATCCACAATTGTCATCTaGGCTAGGTTGGCTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQSTIVI*ARLAAL Trigger: CAGAGCAGCCAACCTAGCCAAGATGACAATTGTGGA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | TTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTAGCACCTGTAACAATAAGGCTGACACCAGATaGGAAAAGTTCATATGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPLPYTPMSVRGLSTCNNKADTR*EKFIWV Trigger: TACCCATATGAACTTTTCCAATCTGGTGTCAGCCTT...ATTGTTACAGGTGCTAAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCATCGTTCAGAGACTGTAAGGAGTTCCTGTAGTTCGGCCATTGCTTTTCATCTCTCCAAAGCTTaGAAGTGTATATTCTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSHRSETVRSSCSSAIAFHLSKA*KCIFSY Trigger: GTAAGAGAATATACACTTCAAAGCTTTGGAGAGATG...AAAAGCAATGGCCGAACTACAGGAACTCCTTACAGTCTCTGAACGATGGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAACCATGGCTGTATCTCTaGACTCCTCCAGTCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKPWLYL*TPPVLP Trigger: AGGAAGGACTGGAGGAGTCAAGAGATACAGCCATGG...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACACTTCCAACTGGGCTTTaGCTCCAGGAGACAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTLPTGL*LQETIP Trigger: TGGAATTGTCTCCTGGAGCAAAAGCCCAGTTGGAAG...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTACCAAAATTTTGCCAGTaGATCCAAGAAGTCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVPKFCQ*IQEVQS Trigger: AGATTGGACTTCTTGGATCAACTGGCAAAATTTTGG...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTAATTTCAAAACCTCCTTaGCTGGCAACAATCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVISKPP*LATILL Trigger: AAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAAT...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | TTACCACTCCCATATACACCAATGTCAGTTCGTGGACTTAGCACCTGTAACAATGAGAGTTCCTTTCCGTaGTCTCATTTGCATGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPLPYTPMSVRGLSTCNNESSFP*SHLHVK Trigger: TTTAACATGCAAATGAGACAACGGAAAGGAACTCTC...ATTGTTACAGGTGCTAAGTCCACGAACTGACATTGGTGTATATGGGAGTGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTAGCATATTCTCTTACAGCTaGCTCAAATCCAAAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLFQVSIVVATLNSFHFSIFSYS*LKSKGF Trigger: GAAGCCTTTGGATTTGAGCAAGCTGTAAGAGAATAT...GCTAAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | TCCACTTTAGCTGTCCATTCACGAGCCTTTTGTAAGGCTTCTTTTAAGGACAACATATTCTCTTACAGCTaGCTCAAATCCAAAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STLAVHSRAFCKASFKDNIFSYS*LKSKGF Trigger: GAAGCCTTTGGATTTGAGCAAGCTGTAAGAGAATAT...GTTGTCCTTAAAAGAAGCCTTACAAAAGGCTCGTGAATGGACAGCTAAAGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATCGGTACCTAAGACATTaGTTCTGCATGGGGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EIQDTSTATHSNNITGQDRYLRH*FCMGQE Trigger: CTCTTGCCCCATGCAGAACAAATGTCTTAGGTACCG...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTCCTGTAGTTCGGCCATaGCTTTTTCTACAGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GNLEHRHNGKQCSKISYSPVVRP*LFLQHG Trigger: ACCATGCTGTAGAAAAAGCAATGGCCGAACTACAGG...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGAACAGATTGCTAGAGTTAGCAGAGCAATTCAAGCAGAGCAGAGAGTACAATATTTTCTAAATTaGCCATACTGTGCCGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLEQIARVSRAIQAEQRVQYFLN*PYCAEV Trigger: GACCTCGGCACAGTATGGCAAATTTAGAAAATATTG...TACTCTCTGCTCTGCTTGAATTGCTCTGCTAACTCTAGCAATCTGTTCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTTTATGGAACCAGTCTTaGCAGAGCTCACACTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNLEHRHNGKQCSKISYSLWNQS*QSSHCS Trigger: GCTACAGTGTGAGCTCTGCAAAGACTGGTTCCATAA...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATCCGACCAGTCATACTTaGAGGGGATATCCAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: EIQDTSTATHSNNITGQDPTSHT*RGYPTP Trigger: AGGTGTTGGATATCCCCTCAAAGTATGACTGGTCGG...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 90 bp | AGAGAGAGTTCCTTTCCGTTGTCTCATTTGCATGTTAAATGCATCTaGCCTGTTGGTAACTTTTCTTCTTCGGGTGACTTCATCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RESSFPLSHLHVKCI*PVGNFSSSGDFIFF Trigger: AAAGAAGATGAAGTCACCCGAAGAAGAAAAGTTACCAACAGGTCAGATGCATTTAACATGCAAATGAGACAACGGAAAGGAACTCTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 ENSMUST00000203373.2 |
||
| CDS-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAACATCTTCTTTATCTTTaGCTCCTACTGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKHLLYL*LLLPGP Trigger: TGGGCCTGGCAGTAGGAGCAAAAGATAAAGAAGATG...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTCAAGCTGTTCCAAGTAAGCATAGTTGTTGCCACTCTGAATAGCTTCCACTTTCATCTCTCCAAAGCTTaGAAGTGTATATTCTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LKLFQVSIVVATLNSFHFHLSKA*KCIFSY Trigger: GTAAGAGAATATACACTTCAAAGCTTTGGAGAGATG...AAAGTGGAAGCTATTCAGAGTGGCAACAACTATGCTTACTTGGAACAGCTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATACCGCTTCGGCAAAGTaGTATCCCTGGTTAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: EIQDTSTATHSNNITGQDTASAK*YPWLNP Trigger: TGGATTTAACCAGGGATACAACTTTGCCGAAGCGGT...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATCCAAGTGTCATAGGATaGTGCTCTCACTTTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: EIQDTSTATHSNNITGQDPSVIG*CSHFDT Trigger: GGTGTCAAAGTGAGAGCACAATCCTATGACACTTGG...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTACCACTTCCTCAGACTaGATGGGAATCTCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GNLEHRHNGKQCSKISYSTTSSD*MGISSS Trigger: TGATGAAGAGATTCCCATCAAGTCTGAGGAAGTGGT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 90 bp | AGATCAACAAAGTTAACAGAGAGAGTTCCTTTCCGTTGTCTCATTTaGATGTTAAATGCATCTGACCTGTTGGTAACTTTTCTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSTKLTERVPFRCLI*MLNASDLLVTFLLR Trigger: CCGAAGAAGAAAAGTTACCAACAGGTCAGATGCATTTAACATGCAAATGAGACAACGGAAAGGAACTCTCTCTGTTAACTTTGTTGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 ENSMUST00000203373.2 |
||
| CDS-3UTR CAA 90 bp | GGGAATCTTGAGCACAGACATAATGGCAAACAATGTAGTAAAATTAGCTACAGTAAGGCTGACACCAGATaGGAAAAGTTCATATGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GNLEHRHNGKQCSKISYSKADTR*EKFIWV Trigger: TACCCATATGAACTTTTCCAATCTGGTGTCAGCCTT...ACTGTAGCTAATTTTACTACATTGTTTGCCATTATGTCTGTGCTCAAGATTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAAACAACAATTGGCAGCTGCTTTTaGGAGTTCTGCACTGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTLRWKFKIQAQQHIQTTIGSCF*EFCTDN Trigger: ATTATCAGTGCAGAACTCCAAAAAGCAGCTGCCAAT...TGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTCACACTCACATTGAGATGGAAATTCAAGATACAAGCACAGCAACACATTCAATGGCAACATCTTTCTTaGACCATCCTTTTTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTLTLRWKFKIQAQQHIQWQHLS*TILFRK Trigger: TTTCCTAAAAAGGATGGTCAAAGAAAGATGTTGCCA...TTGAATGTGTTGCTGTGCTTGTATCTTGAATTTCCATCTCAATGTGAGTGTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATTGCTGGCAACAATCTaGCTTAAAGCATACAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKLLATI*LKAYKS Trigger: GGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCAA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | GAAATTCAAGATACAAGCACAGCAACACATTCAAACAACATAACTGGTCAAGATAAGACTAACAAGTTGTaGGACAAAGGCCTTCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: EIQDTSTATHSNNITGQDKTNKL*DKGLQF Trigger: GAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTT...ATCTTGACCAGTTATGTTGTTTGAATGTGTTGCTGTGCTTGTATCTTGAATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAACATCTCTCCAAAGCTTaGAAGTGTATATTCTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKHLSKA*KCIFSY Trigger: GTAAGAGAATATACACTTCAAAGCTTTGGAGAGATG...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS-3UTR CAA 90 bp | CTAACTCCTTGTACTACAAGGAAGGAATGGGATTTCTTTATCAAAAAGCAGAAATCTTTAGCTAACTTCTaGGCCAATTTATTCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTPCTTRKEWDFFIKKQKSLANF*ANLFSS Trigger: AGAGCTGAATAAATTGGCCAAGAAGTTAGCTAAAGA...TTTCTGCTTTTTGATAAAGAAATCCCATTCCTTCCTTGTAGTACAAGGAGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | CAAATGGAGGTTGCCAATCCTTGGGTGGCCGGATTTTaGAGATGCCCGTTTTCTCCGCAAAGGGCCGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: QMEVANPWVAGF*RCPFSPQRAGC Trigger: GCATCCGGCCCTTTGCGGAGAAAACGGGCATCTGCAAAATCCGGCCACCCAAGGATTGGCAACCTCCATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS CCA 72 bp | CTTGTTCCACCATACGCTGGCTTAGCACAGAGAGCTTaGCCAGGGCAGAGGACAGTTCATCTGTGGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LVPPYAGLAQRA*PGQRTVHLWLK Trigger: CTTTAGCCACAGATGAACTGTCCTCTGCCCTGGCCAAGCTCTCTGTGCTAAGCCAGCGTATGGTGGAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 90 bp | CAGCATTCTCATCATCAGACTCCTCTGCCCCCGACCAGTCATACTTaGAGGGGATATCCAACACCTTCCTCTCCCGTTTCTTCTCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QHSHHQTPLPPTSHT*RGYPTPSSPVSSPC Trigger: GCACGGAGAAGAAACGGGAGAGGAAGGTGTTGGATATCCCCTCAAAGTATGACTGGTCGGGGGCAGAGGAGTCTGATGATGAGAATGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 90 bp | ACACTGTACCCAGTCTACCTTGTCCTTACACGGCCTTTGGCAGTTTaGGGCTGCACACACAGCATTCTCATCATCAGACTCCTCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TLYPVYLVLTRPLAV*GCTHSILIIRLLCP Trigger: GGGGCAGAGGAGTCTGATGATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGACAAGGTAGACTGGGTACAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 72 bp | GCATGCTCTGCACAGAATGACGGTGCCGTCCACATGTaGGTCACCACTTCCTCAGACTTGATGGGAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACSAQNDGAVHM*VTTSSDLMGIS Trigger: AGAGATTCCCATCAAGTCTGAGGAAGTGGTGACTCACATGTGGACGGCACCGTCATTCTGTGCAGAGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | TTGCCAACTCATGGCACGTTCTGTCAAACACTGCAGTaGTTCTCCTTCCGGCAACCGTACAGGCAACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPTHGTFCQTLQ*FSFRQPYRQLL Trigger: CAGAAGTTGCCTGTACGGTTGCCGGAAGGAGAAGCACTGCAGTGTTTGACAGAACGTGCCATGAGTTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | GCCAGGGCAGAGGACAGTTCATCTGTGGCTAAAGCTTaGCGTGCTTTATCTTGCCAACTCATGGCACGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARAEDSSSVAKA*RALSCQLMARS Trigger: AGAACGTGCCATGAGTTGGCAAGATAAAGCACGCCAAGCTTTAGCCACAGATGAACTGTCCTCTGCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | CAGAGAGCTTGGCCAGGGCAGAGGACAGTTCATCTGTaGCTAAAGCTTGGCGTGCTTTATCTTGCCAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRAWPGQRTVHL*LKLGVLYLANS Trigger: TGAGTTGGCAAGATAAAGCACGCCAAGCTTTAGCCACAGATGAACTGTCCTCTGCCCTGGCCAAGCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | CATCATCAGACTCCTCTGCCCCCGACCAGTCATACTTaGAGGGGATATCCAACACCTTCCTCTCCCGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HHQTPLPPTSHT*RGYPTPSSPVS Trigger: AGAAACGGGAGAGGAAGGTGTTGGATATCCCCTCAAAGTATGACTGGTCGGGGGCAGAGGAGTCTGATGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 72 bp | AGTGCTTCTCCTTCCGGCAACCGTACAGGCAACTTCTaGAGGGATACCAGGAGTGACAGAATAGTCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SASPSGNRTGNF*RDTRSDRIVSS Trigger: GCTAGAGACTATTCTGTCACTCCTGGTATCCCTTCAGAAGTTGCCTGTACGGTTGCCGGAAGGAGAAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 72 bp | ATCATCAGACTCCTCTGCCCCCGACCAGTCATACTTTaGGGGGATATCCAACACCTTCCTCTCCCGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IIRLLCPRPVIL*GDIQHLPLPFL Trigger: AAGAAACGGGAGAGGAAGGTGTTGGATATCCCCTCAAAGTATGACTGGTCGGGGGCAGAGGAGTCTGATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | TTATCTTGCCAACTCATGGCACGTTCTGTCAAACACTaGAGTGCTTCTCCTTCCGGCAACCGTACAGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSCQLMARSVKH*SASPSGNRTGN Trigger: GTTGCCTGTACGGTTGCCGGAAGGAGAAGCACTGCAGTGTTTGACAGAACGTGCCATGAGTTGGCAAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | TACCTTGTCCTTACACGGCCTTTGGCAGTTTTGGGCTaGACACACAGCATTCTCATCATCAGACTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YLVLTRPLAVLG*THSILIIRLLC Trigger: GCAGAGGAGTCTGATGATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGACAAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | CACTGTACCCAGTCTACCTTGTCCTTACACGGCCTTTaGCAGTTTTGGGCTGCACACACAGCATTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: HCTQSTLSLHGL*QFWAAHTAFSS Trigger: TGATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGACAAGGTAGACTGGGTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | GGCTGCTCTGAGGGAATGCATGGCTTCAATCTCCTTTaGCTCTCGTTCTTTGAAAACTGCCACCACCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCSEGMHGFNLL*LSFFENCHHHG Trigger: GCCATGGTGGTGGCAGTTTTCAAAGAACGAGAGCAAAAGGAGATTGAAGCCATGCATTCCCTCAGAGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | CCAGTCTACCTTGTCCTTACACGGCCTTTGGCAGTTTaGGGCTGCACACACAGCATTCTCATCATCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: PVYLVLTRPLAV*GCTHSILIIRL Trigger: GAGTCTGATGATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGACAAGGTAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | ACACTGTACCCAGTCTACCTTGTCCTTACACGGCCTTaGGCAGTTTTGGGCTGCACACACAGCATTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TLYPVYLVLTRP*AVLGCTHSILI Trigger: GATGAGAATGCTGTGTGTGCAGCCCAAAACTGCCAAAGGCCGTGTAAGGACAAGGTAGACTGGGTACAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 72 bp | GCTCCACAATTGTCATCTTGGCTAGGTTGGCTGCTCTaGGGGAATGCATGGCTTCAATCTCCTTTTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: APQLSSWLGWLL*GNAWLQSPFAL Trigger: GAGAGCAAAAGGAGATTGAAGCCATGCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGACAATTGTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 72 bp | CATCCAGAGACACTTCTAGGAGGTCTCCAACCATCATaGGTTCTTCCAACTGGGCTTTTGCTCCAGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: HPETLLGGLQPS*VLPTGLLLQET Trigger: TGTCTCCTGGAGCAAAAGCCCAGTTGGAAGAACTCATGATGGTTGGAGACCTCCTAGAAGTGTCTCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | GGAATATTCATTCTTGTTCCCCGCTCTGGGGAAGGCTaGATGTCAGTGCTGAGAACCTCAGCCTCAACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GIFILVPRSGEG*MSVLRTSASTF Trigger: AAAAGTTGAGGCTGAGGTTCTCAGCACTGACATCCAGCCTTCCCCAGAGCGGGGAACAAGAATGAATATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS CCA 72 bp | CAACTGGGCTTTTGCTCCAGGAGACAATTCCAATACTaGAGGCTCCAAACTTCTGGGAACCAAAGGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLGFCSRRQFQY*RLQTSGNQRAL Trigger: AAGAGCCCTTTGGTTCCCAGAAGTTTGGAGCCTCCAGTATTGGAATTGTCTCCTGGAGCAAAAGCCCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 90 bp | GAACTTGATTTAGGAAGGGGAACACAGCTGTTATGGAACCAGTCTTaGCAGAGCTCACACTGTAGCATAAACCCACTGGCTGTCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ELDLGRGTQLLWNQS*QSSHCSINPLAVLR Trigger: CCGCAAGACAGCCAGTGGGTTTATGCTACAGTGTGAGCTCTGCAAAGACTGGTTCCATAACAGCTGTGTTCCCCTTCCTAAATCAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 90 bp | AGGGAGGAGGTGGTGCTTGGCCTGGGCTATCTGGCCCCTGCTTCTTaGCACAGTTTATACAGATGTAATCTTCATTTTCAGCCATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: REEVVLGLGYLAPAS*HSLYRCNLHFQPFL Trigger: CAGAAATGGCTGAAAATGAAGATTACATCTGTATAAACTGTGCAAAGAAGCAGGGGCCAGATAGCCCAGGCCAAGCACCACCTCCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | TGTAAGAATCTGTCCTCTGAGGGTGGATGTGTGGCCTaGAAAATCCGCCAAATGTGTTGTGTCTCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CKNLSSEGGCVA*KIRQMCCVSSR Trigger: TCTGGATGAGACACAACACATTTGGCGGATTTTGCAGGCCACACATCCACCCTCAGAGGACAGATTCTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | AGGAGTGAAACGGAAGGTTTTTACTTCACAGGCAAATaGAGGTTGCCAATCCTTGGGTGGCCGGATTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSETEGFYFTGK*RLPILGWPDFA Trigger: TGCAAAATCCGGCCACCCAAGGATTGGCAACCTCCATTTGCCTGTGAAGTAAAAACCTTCCGTTTCACTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
||
| CDS CCA 72 bp | GTTGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTTaGTCCGAGTCTTCCCACTATCTGAGCTCTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VGQRPSILLLSV*SESSHYLSSAC Trigger: ACAGGCAGAGCTCAGATAGTGGGAAGACTCGGACCAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | TGGCTAAAGCTTGGCGTGCTTTATCTTGCCAACTCATaGCACGTTCTGTCAAACACTGCAGTGCTTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: WLKLGVLYLANS*HVLSNTAVLLL Trigger: AAGGAGAAGCACTGCAGTGTTTGACAGAACGTGCCATGAGTTGGCAAGATAAAGCACGCCAAGCTTTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | TGTTGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTaGGTCCGAGTCTTCCCACTATCTGAGCTCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CWTKAFNSSTVS*VRVFPLSELCL Trigger: CAGGCAGAGCTCAGATAGTGGGAAGACTCGGACCAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | TTAGGAAGGGGAACACAGCTGTTATGGAACCAGTCTTaGCAGAGCTCACACTGTAGCATAAACCCACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGRGTQLLWNQS*QSSHCSINPLA Trigger: AGCCAGTGGGTTTATGCTACAGTGTGAGCTCTGCAAAGACTGGTTCCATAACAGCTGTGTTCCCCTTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 72 bp | CGTTTCTTCTCCGTGCTCTCTTTCACAAGCTCCACTTaGGCGGCAGCAGCCTTTTCTTTCTTTTTCTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RFFSVLSFTSST*AAAAFSFFFFR Trigger: GCGAAAGAAAAAGAAAGAAAAGGCTGCTGCCGCCAAAGTGGAGCTTGTGAAAGAGAGCACGGAGAAGAAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CAA 90 bp | TTCCTCTCCCGTTTCTTCTCCGTGCTCTCTTTCACAAGCTCCACTTaGGCGGCAGCAGCCTTTTCTTTCTTTTTCTTTCGCTCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLSRFFSVLSFTSST*AAAAFSFFFFRSSS Trigger: AGAAGAAGAGCGAAAGAAAAAGAAAGAAAAGGCTGCTGCCGCCAAAGTGGAGCTTGTGAAAGAGAGCACGGAGAAGAAACGGGAGAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS TCA 72 bp | TTTAGCCTGCCAGCTGGATCCCTTTTTCTGGGAACTTaGTTTAGGAAGGGGAACACAGCTGTTATGGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: FSLPAGSLFLGT*FRKGNTAVMEP Trigger: TGGTTCCATAACAGCTGTGTTCCCCTTCCTAAATCAAGTTCCCAGAAAAAGGGATCCAGCTGGCAGGCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | ATTGTCATCTTGGCTAGGTTGGCTGCTCTGAGGGAATaGATGGCTTCAATCTCCTTTTGCTCTCGTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IVILARLAALRE*MASISFCSRSL Trigger: CAAAGAACGAGAGCAAAAGGAGATTGAAGCCATGCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS GCA 72 bp | GATGATACACTGCTCACCACCCGGTTAAAAGCAGACTaGTGGAAACTAGGTAAGTGTCCCTGTAAATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DDTLLTTRLKAD*WKLGKCPCKSG Trigger: TCCAGATTTACAGGGACACTTACCTAGTTTCCAGCAGTCTGCTTTTAACCGGGTGGTGAGCAGTGTATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
||
| CDS CCA 72 bp | TCTAGGAGGTCTCCAACCATCATGAGTTCTTCCAACTaGGCTTTTGCTCCAGGAGACAATTCCAATACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRRSPTIMSSSN*AFAPGDNSNTG Trigger: TCCAGTATTGGAATTGTCTCCTGGAGCAAAAGCCCAGTTGGAAGAACTCATGATGGTTGGAGACCTCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CCA 72 bp | GTTTCTTCTCCGTGCTCTCTTTCACAAGCTCCACTTTaGCGGCAGCAGCCTTTTCTTTCTTTTTCTTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: VSSPCSLSQAPL*RQQPFLSFSFA Trigger: AGCGAAAGAAAAAGAAAGAAAAGGCTGCTGCCGCCAAAGTGGAGCTTGTGAAAGAGAGCACGGAGAAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 72 bp | AATTTCACTTCTTCTATGCGCTCCACAATTGTCATCTaGGCTAGGTTGGCTGCTCTGAGGGAATGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: NFTSSMRSTIVI*ARLAALRECMA Trigger: AGCCATGCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGACAATTGTGGAGCGCATAGAAGAAGTGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 90 bp | CTAACAAGTTGTTGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTaGGTCCGAGTCTTCCCACTATCTGAGCTCTGCCTGTGTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LTSCWTKAFNSSTVS*VRVFPLSELCLCFC Trigger: GCAAAAACACAGGCAGAGCTCAGATAGTGGGAAGACTCGGACCAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS TCA 72 bp | GGGGTTTCATCCATCATGGCCTCCTGGGCACGTTCATaGAATTCTTCTACATCATCCAGCAGATTCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: GVSSIMASWARS*NSSTSSSRFFT Trigger: AGTAAAGAATCTGCTGGATGATGTAGAAGAATTTCATGAACGTGCCCAGGAGGCCATGATGGATGAAACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 72 bp | GAATGCATGGCTTCAATCTCCTTTTGCTCTCGTTCTTaGAAAACTGCCACCACCATGGCTGTATCTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: ECMASISFCSRS*KTATTMAVSLD Trigger: GTCAAGAGATACAGCCATGGTGGTGGCAGTTTTCAAAGAACGAGAGCAAAAGGAGATTGAAGCCATGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 90 bp | TACTTGTCGAGTTTGGCTGATGACACACGGAAGACTAACAAGTTGTaGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTTGGTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: YLSSLADDTRKTNKL*DKGLQFFYCQFGPS Trigger: ACTCGGACCAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 90 bp | CTTTACTTGTCGAGTTTGGCTGATGACACACGGAAGACTAACAAGTaGTTGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTTGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LYLSSLADDTRKTNK*LDKGLQFFYCQFGP Trigger: CGGACCAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 90 bp | CAAATACAAAATTTCACTTCTTCTATGCGCTCCACAATTGTCATCTaGGCTAGGTTGGCTGCTCTGAGGGAATGCATGGCTTCAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: QIQNFTSSMRSTIVI*ARLAALRECMASIS Trigger: GGAGATTGAAGCCATGCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGACAATTGTGGAGCGCATAGAAGAAGTGAAATTTTGTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS TCA 72 bp | AATGCATGGCTTCAATCTCCTTTTGCTCTCGTTCTTTaGAAACTGCCACCACCATGGCTGTATCTCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: NAWLQSPFALVL*KLPPPWLYLLT Trigger: AGTCAAGAGATACAGCCATGGTGGTGGCAGTTTTCAAAGAACGAGAGCAAAAGGAGATTGAAGCCATGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CCA 72 bp | CTTACTCTAGTCATTGCCTCAAGTTCATTCAGGCGCTaGACTCTAGGAGTGAAACGGAAGGTTTTTACTTCA | + |
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Preference number: 6 (lower is better) Translates to: LTLVIASSSFRR*TLGVKRKVFTS Trigger: TGAAGTAAAAACCTTCCGTTTCACTCCTAGAGTCCAGCGCCTGAATGAACTTGAGGCAATGACTAGAGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| CDS CAA 72 bp | TCGAGTTTGGCTGATGACACACGGAAGACTAACAAGTaGTTGGACAAAGGCCTTCAATTCTTCTACTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLADDTRKTNK*LDKGLQFFYCQ Trigger: CTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CCA 72 bp | GTTTGGCTGATGACACACGGAAGACTAACAAGTTGTTaGACAAAGGCCTTCAATTCTTCTACTGTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VWLMTHGRLTSC*TKAFNSSTVSL Trigger: CAAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CCA 72 bp | TCTACATCATCCAGCAGATTCTTTACTTGTCGAGTTTaGCTGATGACACACGGAAGACTAACAAGTTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: STSSSRFFTCRV*LMTHGRLTSCW Trigger: CCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAAGAATCTGCTGGATGATGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS TCA 72 bp | TCCTTTCCGTTGTCTCATTTGCATGTTAAATGCATCTaGCCTGTTGGTAACTTTTCTTCTTCGGGTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: SFPLSHLHVKCI*PVGNFSSSGDF Trigger: GAAGTCACCCGAAGAAGAAAAGTTACCAACAGGTCAGATGCATTTAACATGCAAATGAGACAACGGAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 ENSMUST00000203373.2 |
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| CDS CAA 72 bp | AGTTTGGCTGATGACACACGGAAGACTAACAAGTTGTaGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLADDTRKTNKL*DKGLQFFYCQF Trigger: AAACTGACAGTAGAAGAATTGAAGGCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 72 bp | TTCTACATCATCCAGCAGATTCTTTACTTGTCGAGTTaGGCTGATGACACACGGAAGACTAACAAGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FYIIQQILYLSS*ADDTRKTNKLL Trigger: CAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAAGAATCTGCTGGATGATGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 90 bp | ATGAAATTCTTCTACATCATCCAGCAGATTCTTTACTTGTCGAGTTaGGCTGATGACACACGGAAGACTAACAAGTTGTTGGACAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: MKFFYIIQQILYLSS*ADDTRKTNKLLDKG Trigger: GCCTTTGTCCAACAACTTGTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAAGAATCTGCTGGATGATGTAGAAGAATTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS CAA 90 bp | AGGGATCTTCAATGTAGATCCTTGAAGTTCCCAAAATTTTGCCAGTaGATCCAAGAAGTCCAATCTTACTCTAGTCATTGCCTCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RDLQCRSLKFPKFCQ*IQEVQSYSSHCLKF Trigger: GAACTTGAGGCAATGACTAGAGTAAGATTGGACTTCTTGGATCAACTGGCAAAATTTTGGGAACTTCAAGGATCTACATTGAAGATCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| CDS CAA 72 bp | ATGAAATTCTTCTACATCATCCAGCAGATTCTTTACTaGTCGAGTTTGGCTGATGACACACGGAAGACTAAC | + |
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Preference number: 6 (lower is better) Translates to: MKFFYIIQQILY*SSLADDTRKTN Trigger: GTTAGTCTTCCGTGTGTCATCAGCCAAACTCGACAAGTAAAGAATCTGCTGGATGATGTAGAAGAATTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005108.10 |
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| CDS TCA 72 bp | CTTCAGTTCTGTGTTTCTATTTACTTCTCCAGAGTCTaGCATAAGGCTGACACCAGATTGGAAAAGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LQFCVSIYFSRV*HKADTRLEKFI Trigger: TATGAACTTTTCCAATCTGGTGTCAGCCTTATGTCAGACTCTGGAGAAGTAAATAGAAACACAGAACTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203373.2 |
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| CDS CAA 72 bp | CAATGTAGATCCTTGAAGTTCCCAAAATTTTGCCAGTaGATCCAAGAAGTCCAATCTTACTCTAGTCATTGC | + |
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Preference number: 6 (lower is better) Translates to: QCRSLKFPKFCQ*IQEVQSYSSHC Trigger: GCAATGACTAGAGTAAGATTGGACTTCTTGGATCAACTGGCAAAATTTTGGGAACTTCAAGGATCTACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| CDS CAA 72 bp | ATCAGGCATTTGTACACCCATAAGGCTGACACCAGATaGGAAAAGTTCATATGGGTAGAGAATTCTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: IRHLYTHKADTR*EKFIWVENSFI Trigger: TATGAAAGAATTCTCTACCCATATGAACTTTTCCAATCTGGTGTCAGCCTTATGGGTGTACAAATGCCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| CDS CAA 90 bp | GTTCCTTTCCGTTGTCTCATTTGCATGTTAAATGCATCTGACCTGTaGGTAACTTTTCTTCTTCGGGTGACTTCATCTTCTTTATCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VPFRCLICMLNASDL*VTFLLRVTSSSLSF Trigger: AAAAGATAAAGAAGATGAAGTCACCCGAAGAAGAAAAGTTACCAACAGGTCAGATGCATTTAACATGCAAATGAGACAACGGAAAGGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 ENSMUST00000203373.2 |
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| CDS GCA 72 bp | AAGTTAACAGAGAGAGTTCCTTTCCGTTGTCTCATTTaGATGTTAAATGCATCTGACCTGTTGGTAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: KLTERVPFRCLI*MLNASDLLVTF Trigger: AAAAGTTACCAACAGGTCAGATGCATTTAACATGCAAATGAGACAACGGAAAGGAACTCTCTCTGTTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 ENSMUST00000203373.2 |
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| CDS CAA 72 bp | CATTTCTTCTCTTTGGTGACTATTTCAAAACCTCCTTaGCTGGCAACAATCTTGCTTAAAGCATACAAATCC | + |
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Preference number: 6 (lower is better) Translates to: HFFSLVTISKPP*LATILLKAYKS Trigger: GGATTTGTATGCTTTAAGCAAGATTGTTGCCAGCAAAGGAGGTTTTGAAATAGTCACCAAAGAGAAGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| CDS TCA 72 bp | TCAGATTTAAAATTATCTGCCATCTCTCCAAAGCTTTaGAGTGTATATTCTCTTACAGCTTGCTCAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SDLKLSAISPKL*SVYSLTACSNP Trigger: TGGATTTGAGCAAGCTGTAAGAGAATATACACTTCAAAGCTTTGGAGAGATGGCAGATAATTTTAAATCTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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| CDS CAA 72 bp | ATCAGATTTAAAATTATCTGCCATCTCTCCAAAGCTTaGAAGTGTATATTCTCTTACAGCTTGCTCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: IRFKIICHLSKA*KCIFSYSLLKS Trigger: GGATTTGAGCAAGCTGTAAGAGAATATACACTTCAAAGCTTTGGAGAGATGGCAGATAATTTTAAATCTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005108.10 ENSMUST00000132009.4 ENSMUST00000135802.8 |
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