Pregenerated sensors for KDM4C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028397Ensembl transcript IDs: ENSMUST00000030102.12, ENSMUST00000077851.10, ENSMUST00000149295.2
Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCCCTaGGGAAGGGACCTGAGCCAGAGAGGGAACCCCGCTTCTTTAGCA | + |
Preference number: 1 (lower is better) Translates to: AATEGGGKGASKCVP*GRDLSQRGNPASLA Trigger: TGCTAAAGAAGCGGGGTTCCCTCTCTGGCTCAGGTCCCTTCCTCAGGGAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CCA 90 bp | TTTCCCTGGCTGTGGAAAATATATATAAATACACCCACCGGCTGTTaGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCA | + |
Preference number: 1 (lower is better) Translates to: FPWLWKIYINTPTGC*VMRLPLKEVGKEPP Trigger: TGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTTCCACAGCCAGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR GCA 90 bp | AGGGGTGATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTaGTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAATACCA | + |
Preference number: 1 (lower is better) Translates to: RGDQITEATNMSLLG*LVIKLQKPGLLPIP Trigger: TGGTATTGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATCACCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CAA 90 bp | AAGCACCCAGCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTaGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACA | + |
Preference number: 2 (lower is better) Translates to: KHPATCPNVYPKAVP*SSLFWSELHCGCCT Trigger: TGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGCTGGGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR GCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCTCTTCTGGTCTGAGCTaGACTGTGGCTGCTGCACAT | + |
Preference number: 2 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFSSGLS*TVAAAH Trigger: ATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGA...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR TCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCCTGAGGAAGGGACCTaGGCCAGAGAGGGAACCCCG | + |
Preference number: 2 (lower is better) Translates to: KIYINTPTGCWVMRLPLKPEEGT*AREGTP Trigger: CGGGGTTCCCTCTCTGGCTCAGGTCCCTTCCTCAGG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CAA 90 bp | CTTTCCCTGGCTGTGGAAAATATATATAAATACACCCACCGGCTGTaGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCC | + |
Preference number: 2 (lower is better) Translates to: LSLAVENIYKYTHRL*GDEAATEGGGKGAS Trigger: GGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTTCCACAGCCAGGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR TCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATTCCCTCTTCTGGTCTaGGCTGCACTGTGGCTGCTG | + |
Preference number: 2 (lower is better) Translates to: DQITEATNMSLLGCLVIKFPLLV*AALWLL Trigger: CAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR GCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGTCTTCTGGTCTGAGCTaGACTGTGGCTGCTGCACAT | + |
Preference number: 2 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLSSGLS*TVAAAH Trigger: ATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGA...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR TCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTTTGGGGTCAAACAAATaGCTGAGGGGTGATCAGATT | + |
Preference number: 2 (lower is better) Translates to: CTREDSIQVNPITIHAICLGSNK*LRGDQI Trigger: AATCTGATCACCCCTCAGTCATTTGTTTGACCCCAA...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR TCA 72 bp | GAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCCCTaGGGAAGGGACCTGAGCCAGAGAGGGAACCCCGCT | + |
Preference number: 3 (lower is better) Translates to: EGGGKGASKCVP*GRDLSQRGNPA Trigger: AGCGGGGTTCCCTCTCTGGCTCAGGTCCCTTCCTCAGGGAACACATTTGGAGGCTCCTTTCCCACCTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR CAA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCCCCAAGGCTGTCCCTTaGTCTTCCCTCTTCTGGTCT | + |
Preference number: 3 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFPKAVP*SSLFWS Trigger: AGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CCA 72 bp | GTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTaGTCTGAGCTGCACTGTGGCTGCTGCACATTATCA | + |
Preference number: 3 (lower is better) Translates to: VYPKAVPLSSLF*SELHCGCCTLS Trigger: TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CCA 72 bp | CTGTGGAAAATATATATAAATACACCCACCGGCTGTTaGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAG | + |
Preference number: 3 (lower is better) Translates to: LWKIYINTPTGC*VMRLPLKEVGK Trigger: CTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTTCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CCA 72 bp | TCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTaGTTTATTACCAATACCAAAGAAGCACCCAGCCAC | + |
Preference number: 3 (lower is better) Translates to: SSWLLGNQTPEA*FITNTKEAPSH Trigger: GTGGCTGGGTGCTTCTTTGGTATTGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTCTCTTCTTGGTTGCTaGGTAATCAAACTCCAGAAG | + |
Preference number: 3 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSLLGC*VIKLQK Trigger: CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR-3UTR CAA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTTATGTCTCTTCTTGGTaGCTTGGTAATCAAACTCCA | + |
Preference number: 3 (lower is better) Translates to: CTREDSIQVNPITIHAICYVSSW*LGNQTP Trigger: TGGAGTTTGATTACCAAGCAACCAAGAAGAGACATA...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR GCA 72 bp | CAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTaGTTGGTAATCAAACTCCAGAAGCCTGGTTTATTA | + |
Preference number: 3 (lower is better) Translates to: QITEATNMSLLG*LVIKLQKPGLL Trigger: TAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGCCCATGGCAGGGTTTaGACCCTCTTCCCCACTAAA | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCAHGRV*TLFPTK Trigger: TTTAGTGGGGAAGAGGGTGCAAACCCTGCCATGGGC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCAGCCTTGGGAGCTACTaGGGAAGAAGCCTTGGGCTA | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCSLGSY*GRSLGL Trigger: TAGCCCAAGGCTTCTTCCCCAGTAGCTCCCAAGGCT...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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3UTR CAA 72 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTaGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGC | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVP*SSLFWSELHCG Trigger: GCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGCCTGTGACCATCTGCTaGATTGGTGCTGGGATGAGC | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWPVTIC*IGAGMS Trigger: GCTCATCCCAGCACCAATTCAGCAGATGGTCACAGG...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGTCCCGACTGCCCTGTaGCCATCTGCTGAATTGGTG | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFVPTAL*PSAELV Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCGGGAC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCAGTCATCAGGCTCCATaGGCACTCCAGCAGCATGGG | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFSHQAP*ALQQHG Trigger: CCCATGCTGCTGGAGTGCTCATGGAGCCTGATGACT...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCCTGCTGTTAGCCAGCTaGCTGAACTCCTTCACAGTC | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCLLLAS*LNSFTV Trigger: GACTGTGAAGGAGTTCAGGCAGCTGGCTAACAGCAG...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGCACTGAGGGGGAAATaGGGGTCATCTTGTGCCGGA | + |
Preference number: 4 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTALRGK*GSSCAG Trigger: TCCGGCACAAGATGACCCTCATTTCCCCCTCAGTGC...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTCACTCGCTACCTGCTaGTTCACAAGTGTCATTGGG | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCSLATC*FTSVIG Trigger: CCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGA...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGGAGCTTAGCACTCTTTaGCTCTTCCTCTCCCCTTGG | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWELSTL*LFLSPW Trigger: CCAAGGGGAGAGGAAGAGGCAAAGAGTGCTAAGCTC...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGATGGCCATGAGAAAGTaGTATGCAGTCAGCGCCCTC | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWMAMRK*YAVSAL Trigger: GAGGGCGCTGACTGCATACCACTTTCTCATGGCCAT...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCCCTCCATGGAAGGTCTaGAGGTCATTATCTTACAGC | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCPPWKV*RSLSYS Trigger: GCTGTAAGATAATGACCTTCAGACCTTCCATGGAGG...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAAGTCATCAGGCTCCATaGGCACTCCAGCAGCATGGG | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSSHQAP*ALQQHG Trigger: CCCATGCTGCTGGAGTGCTCATGGAGCCTGATGACT...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGCTCGATGGGCTCCTTTaGATTCCATGTATGCGAGGT | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWLDGLL*IPCMRG Trigger: ACCTCGCATACATGGAATCCAAAGGAGCCCATCGAG...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCACACCTTGGCAAGACCTaGTCGATGGGCTCCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSHLGKT*SMGSFG Trigger: TCCAAAGGAGCCCATCGAGCAGGTCTTGCCAAGGTG...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTCTGCTGTTAGCCAGCTaGCTGAACTCCTTCACAGTC | + |
Preference number: 4 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTLLLAS*LNSFTV Trigger: GACTGTGAAGGAGTTCAGGCAGCTGGCTAACAGCAG...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTTTGTCTGCCAAAGGTaGATGAGAGGCTTTGCCCAA | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWFVCQR*MRGFAQ Trigger: TTGGGCAAAGCCTCTCATCCACCTTTGGCAGACAAA...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCTCAGGCCATTTGACTTaGATGACTTCTCCCTCCGCA | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFSGHLT*MTSPSA Trigger: TGCGGAGGGAGAAGTCATCCAAGTCAAATGGCCTGA...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCATGCGAGGTATTTGTTaGACTCCCGAAACTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFMRGIC*TPETPP Trigger: TGGAGGAGTTTCGGGAGTTCAACAAATACCTCGCAT...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGCTCCCATTTATATCTaGTCCATAAATAGGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCAPIYI*SINRCH Trigger: GTGGCACCTATTTATGGAGCAGATATAAATGGGAGC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGTGGATGAGAGGCTTTaGCCAAGACTCTGTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFVDERL*PRLCFF Trigger: GAAGAAACAGAGTCTTGGGCAAAGCCTCTCATCCAC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCATCCATGCATTTCTCTTaGACCGGGCACACAGCCATC | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSSMHFS*TGHTAI Trigger: GATGGCTGTGTGCCCGGTGCAAGAGAAATGCATGGA...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGGCAGAGACAGCATTCTaGAGTCCATGCATTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWAETAF*SPCISL Trigger: AAGAGAAATGCATGGACTGCAGAATGCTGTCTCTGC...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGTCTTCTCTCTTCATTaGAATCTGCGATCCATCTTC | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCVFSLH*NLRSIF Trigger: GAAGATGGATCGCAGATTGCAATGAAGAGAGAAGAC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGTCATGGCTTTCTTCTaGATGTTGTATTGCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCVMAFF*MLYCVN Trigger: GTTCACGCAATACAACATCCAGAAGAAAGCCATGAC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGGCTTACCAAGTGGATaGCGCCAACTCTTAGTAGTT | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFGLPSG*RQLLVV Trigger: AACTACTAAGAGTTGGCGCCATCCACTTGGTAAGCC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCACGGAGGCTTACCAAGTaGATGGCGCCAACTCTTAGT | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSRRLTK*MAPTLS Trigger: ACTAAGAGTTGGCGCCATCCACTTGGTAAGCCTCCG...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGTCTTTCTTCCAGATTaGACCACTTCATTTACTGCT | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCVFLPD*TTSFTA Trigger: AGCAGTAAATGAAGTGGTTCAATCTGGAAGAAAGAC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR GCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGCATCTGCTGAATTGGTaGTGGGATGAGCAAATTATC | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWHLLNW*WDEQII Trigger: GATAATTTGCTCATCCCAGCACCAATTCAGCAGATG...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR GCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCATCACTCGCTACCTGCTaGTTCACAAGTGTCATTGGG | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSSLATC*FTSVIG Trigger: CCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGA...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR GCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCACACCTCCCCTCAAATTaGAGAGACAGCATTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSHLPSN*RDSILQ Trigger: CTGCAGAATGCTGTCTCTGCAATTTGAGGGGAGGTG...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGGCTTACCAAGTGGATaGCGCCAACTCTTAGTAGTT | + |
Preference number: 4 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTGLPSG*RQLLVV Trigger: AACTACTAAGAGTTGGCGCCATCCACTTGGTAAGCC...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGACCCACAGAAATaGCTTTCTCACAAGTTTTGG | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWSDPQK*LSHKFW Trigger: CCAAAACTTGTGAGAAAGCCATTTCTGTGGGTCAGA...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR GCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGTCTTCTCTCTTCATTaGAATCTGCGATCCATCTTC | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFVFSLH*NLRSIF Trigger: GAAGATGGATCGCAGATTGCAATGAAGAGAGAAGAC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGGAGTGGGCTTTGTATaGTCAATAGTATATATATCC | + |
Preference number: 4 (lower is better) Translates to: PKAVPLSSLFWSELHCGCGVGFV*SIVYIS Trigger: GGATATATATACTATTGACCATACAAAGCCCACTCC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCATTTGTCTGCCAAAGGTaGATGAGAGGCTTTGCCCAA | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSFVCQR*MRGFAQ Trigger: TTGGGCAAAGCCTCTCATCCACCTTTGGCAGACAAA...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGCAGATGGCACAGTTTaGCTCCATTTTTGCAACAGT | + |
Preference number: 4 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTADGTV*LHFCNS Trigger: ACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGC...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCTATTTGTGTCCGTTCTaGGACATTAGTGAATCGCAC | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFYLCPF*DISESH Trigger: GTGCGATTCACTAATGTCCCAGAACGGACACAAATA...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGGAGCCTTTACTCTCTTaGGTAACTCTTCATCTAAAG | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWEPLLS*VTLHLK Trigger: CTTTAGATGAAGAGTTACCCAAGAGAGTAAAGGCTC...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR TCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGTCTTTCTTCCAGATTaGACCACTTCATTTACTGCT | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFVFLPD*TTSFTA Trigger: AGCAGTAAATGAAGTGGTTCAATCTGGAAGAAAGAC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAGAAATGTGTCTCTGCTaGAGGAGCCATCATCAAACA | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSEMCLC*RSHHQT Trigger: TGTTTGATGATGGCTCCTTCAGCAGAGACACATTTC...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCCATTTTCTTCTTTGCTaGTATCAGGCTTGTAGTACG | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFHFLLC*YQACST Trigger: CGTACTACAAGCCTGATAGCAGCAAAGAAGAAAATG...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAGACCATCTGCTGAATTaGTGCTGGGATGAGCAAATT | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSDHLLN*CWDEQI Trigger: AATTTGCTCATCCCAGCACCAATTCAGCAGATGGTC...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGAGCCTTGGGAGCTACTaGGGAAGAAGCCTTGGGCTA | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSLGSY*GRSLGL Trigger: TAGCCCAAGGCTTCTTCCCCAGTAGCTCCCAAGGCT...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAGGCTCTGTTGTCTTCTaGTGGAATTTCAGCTGTTAC | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSGSVVF*WNFSCY Trigger: GTAACAGCTGAAATTCCACCAGAAGACAACAGAGCC...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGAATTGGTGCTGGGATaGGCAAATTATCAATATCAT | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFELVLG*ANYQYH Trigger: ATGATATTGATAATTTGCTCATCCCAGCACCAATTC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTCTGCCAAAGGTGGATaGGAGGCTTTGCCCAAGACT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSAKGG*EALPKT Trigger: AGTCTTGGGCAAAGCCTCTCATCCACCTTTGGCAGA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCTTTGGATTCCATGTATaGGAGGTATTTGTTGAACTC | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFFGFHV*EVFVEL Trigger: GAGTTCAACAAATACCTCGCATACATGGAATCCAAA...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAGCTCCCATTTATATCTaGTCCATAAATAGGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PLSSLFWSELHCGCCTLSAPIYI*SINRCH Trigger: GTGGCACCTATTTATGGAGCAGATATAAATGGGAGC...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCTTGTGCCGGAGAAATaGATCACAGCCTTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKLVPEK*ITALGA Trigger: AGCTCCCAAGGCTGTGATGCATTTCTCCGGCACAAG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTCCCTTGGATTACATCTaGTCCATAAAATGTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTPLDYI*SIKCVF Trigger: GAAGACACATTTTATGGAGCAGATGTAATCCAAGGG...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGGAGCTTAGCACTCTTTaGCTCTTCCTCTCCCCTTGG | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKELSTL*LFLSPW Trigger: CCAAGGGGAGAGGAAGAGGCAAAGAGTGCTAAGCTC...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGATAATCCAAGTATCTTaGAGTACAGTATTTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWIIQVS*STVFAA Trigger: AGCAGCAAATACTGTACTCCAAGATACTTGGATTAT...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGGAGTGGGCTTTGTATaGTCAATAGTATATATATCC | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFGVGFV*SIVYIS Trigger: GGATATATATACTATTGACCATACAAAGCCCACTCC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGATGGCCATGAGAAAGTaGTATGCAGTCAGCGCCCTC | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKMAMRK*YAVSAL Trigger: GAGGGCGCTGACTGCATACCACTTTCTCATGGCCAT...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCCCGCACGAAGCACTTaGCACAGGAAATCAGAAGAC | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKPARST*HRKSED Trigger: GTCTTCTGATTTCCTGTGCCAAGTGCTTCGTGCGGG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTTTTGGATTCCATGTATaGGAGGTATTTGTTGAACTC | + |
Preference number: 4 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTFGFHV*EVFVEL Trigger: GAGTTCAACAAATACCTCGCATACATGGAATCCAAA...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCATAATCCAAGTATCTTaGAGTACAGTATTTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFIIQVS*STVFAA Trigger: AGCAGCAAATACTGTACTCCAAGATACTTGGATTAT...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGAGCACTCCAGCAGCATaGGCACACGTAACATGGAAT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSTPAA*AHVTWN Trigger: ATTCCATGTTACGTGTGCCCATGCTGCTGGAGTGCT...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGATGCGAGGTATTTGTTaGACTCCCGAAACTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKMRGIC*TPETPP Trigger: TGGAGGAGTTTCGGGAGTTCAACAAATACCTCGCAT...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTGCACTGAGGGGGAAATaGGGGTCATCTTGTGCCGGA | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICALRGK*GSSCAG Trigger: TCCGGCACAAGATGACCCTCATTTCCCCCTCAGTGC...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTTCTGGATGTTGTATTaGGTGAACAGTCCCGACTGC | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKFWMLY*VNSPDC Trigger: GCAGTCGGGACTGTTCACGCAATACAACATCCAGAA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTCAAGTCGCTTTCCATaGTCCGGAGGTATAGCATAC | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSSRFP*SGGIAY Trigger: GTATGCTATACCTCCGGAGCATGGAAAGCGACTTGA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGGCCCATGGCAGGGTTTaGACCCTCTTCCCCACTAAA | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKAHGRV*TLFPTK Trigger: TTTAGTGGGGAAGAGGGTGCAAACCCTGCCATGGGC...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGGTCCCGACTGCCCTGTaGCCATCTGCTGAATTGGTG | + |
Preference number: 4 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLVPTAL*PSAELV Trigger: CACCAATTCAGCAGATGGTCACAGGGCAGTCGGGAC...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCTTGTGCCGGAGAAATaGATCACAGCCTTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKLVPEK*ITALGA Trigger: AGCTCCCAAGGCTGTGATGCATTTCTCCGGCACAAG...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTCCATGCATTTCTCTTaGACCGGGCACACAGCCATC | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKSMHFS*TGHTAI Trigger: GATGGCTGTGTGCCCGGTGCAAGAGAAATGCATGGA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCACACCTCCCCTCAAATTaGAGAGACAGCATTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPHLPSN*RDSILQ Trigger: CTGCAGAATGCTGTCTCTGCAATTTGAGGGGAGGTG...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCACTCGATGGGCTCCTTTaGATTCCATGTATGCGAGGT | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPLDGLL*IPCMRG Trigger: ACCTCGCATACATGGAATCCAAAGGAGCCCATCGAG...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGAACTCTCCAGCCTCCTaGGTGATCTTGTCGAAGGGA | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKNSPAS*VILSKG Trigger: TCCCTTCGACAAGATCACCCAGGAGGCTGGAGAGTT...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTTCTGGAGTAGATTCTaGAGTGGGCTTTGTATGGTC | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKFWSRF*SGLCMV Trigger: GACCATACAAAGCCCACTCCAGAATCTACTCCAGAA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGGTGAAATTACAGCACTaGCTCTGTTGTCTTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKVKLQH*LCCLLV Trigger: CACCAGAAGACAACAGAGCCAGTGCTGTAATTTCAC...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGGCAGATGGCACAGTTTaGCTCCATTTTTGCAACAGT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKADGTV*LHFCNS Trigger: ACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGC...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAAGCACTCCAGCAGCATaGGCACACGTAACATGGAAT | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPSTPAA*AHVTWN Trigger: ATTCCATGTTACGTGTGCCCATGCTGCTGGAGTGCT...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR GCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCATCCATGTCCTCCGTGTaGCACGCAAATGTTGTTTTC | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPSMSSV*HANVVF Trigger: GAAAACAACATTTGCGTGGCACACGGAGGACATGGA...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAGTGGATGAGAGGCTTTaGCCAAGACTCTGTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPVDERL*PRLCFF Trigger: GAAGAAACAGAGTCTTGGGCAAAGCCTCTCATCCAC...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR CCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTAACTCTCCAGCCTCCTaGGTGATCTTGTCGAAGGGA | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICNSPAS*VILSKG Trigger: TCCCTTCGACAAGATCACCCAGGAGGCTGGAGAGTT...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTCCCGCACGAAGCACTTaGCACAGGAAATCAGAAGAC | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICPARST*HRKSED Trigger: GTCTTCTGATTTCCTGTGCCAAGTGCTTCGTGCGGG...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR TCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATCTGCCAAAGGTGGATaGGAGGCTTTGCCCAAGACT | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKSAKGG*EALPKT Trigger: AGTCTTGGGCAAAGCCTCTCATCCACCTTTGGCAGA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCATTTGTGATGACTGTCTaGCCCACAGAAATGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPFVMTV*PTEMAF Trigger: GAAAGCCATTTCTGTGGGTCAGACAGTCATCACAAA...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR TCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAGAAATGTGTCTCTGCTaGAGGAGCCATCATCAAACA | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPEMCLC*RSHHQT Trigger: TGTTTGATGATGGCTCCTTCAGCAGAGACACATTTC...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCACCCTCATCATAAATaGTCCCATTTATATCTGCTC | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKHPHHK*SHLYLL Trigger: GAGCAGATATAAATGGGAGCATTTATGATGAGGGTG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
||
CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTCCATGTCCTCCGTGTaGCACGCAAATGTTGTTTTC | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKSMSSV*HANVVF Trigger: GAAAACAACATTTGCGTGGCACACGGAGGACATGGA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCAACTTCTTCGTCAATaGTTAGAACCTCAGGCAATT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKQLLRQ*LEPQAI Trigger: AATTGCCTGAGGTTCTAAGCATTGACGAAGAAGTTG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTTAGGAGACTTTGTCTaGCAAAGGTGGATGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKLGDFV*QRWMRG Trigger: GCCTCTCATCCACCTTTGGCAGACAAAGTCTCCTAA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCTGCTGAATTGGTGCTaGGATGAGCAAATTATCAAT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKLLNWC*DEQIIN Trigger: ATTGATAATTTGCTCATCCCAGCACCAATTCAGCAG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTCAAGGTTACTTCCATaGCCCTCTTCATCATTTTCT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSRLLP*PSSSFS Trigger: AGAAAATGATGAAGAGGGCCATGGAAGTAACCTTGA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGCGGAGGCTTACCAAGTaGATGGCGCCAACTCTTAGT | + |
Preference number: 4 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLRRLTK*MAPTLS Trigger: ACTAAGAGTTGGCGCCATCCACTTGGTAAGCCTCCG...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTCTTGTCGAAGGGAATaGCATACTTCTTCAGCACTG | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKSCRRE*HTSSAL Trigger: CAGTGCTGAAGAAGTATGGCATTCCCTTCGACAAGA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTATCATAGCACTGTCTTaGCTTCCACTCCTTAGGAGG | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICIIALS*LPLLRR Trigger: CCTCCTAAGGAGTGGAAGCCAAGACAGTGCTATGAT...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGGACCATCTGCTGAATTaGTGCTGGGATGAGCAAATT | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKDHLLN*CWDEQI Trigger: AATTTGCTCATCCCAGCACCAATTCAGCAGATGGTC...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAGTCATGGCTTTCTTCTaGATGTTGTATTGCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPVMAFF*MLYCVN Trigger: GTTCACGCAATACAACATCCAGAAGAAAGCCATGAC...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGGGCTCTGTTGTCTTCTaGTGGAATTTCAGCTGTTAC | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKGSVVF*WNFSCY Trigger: GTAACAGCTGAAATTCCACCAGAAGACAACAGAGCC...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTTTCACTAAGAGCTTCTaGGATTTCCCCAGGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICFTKSF*DFPRLK Trigger: CTTGAGCCTGGGGAAATCCCAGAAGCTCTTAGTGAA...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCATCTGACCCACAGAAATaGCTTTCTCACAAGTTTTGG | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPSDPQK*LSHKFW Trigger: CCAAAACTTGTGAGAAAGCCATTTCTGTGGGTCAGA...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATCAGGCCATTTGACTTaGATGACTTCTCCCTCCGCA | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKSGHLT*MTSPSA Trigger: TGCGGAGGGAGAAGTCATCCAAGTCAAATGGCCTGA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACCTCCATGGAAGGTCTaGAGGTCATTATCTTACAGC | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKPPWKV*RSLSYS Trigger: GCTGTAAGATAATGACCTTCAGACCTTCCATGGAGG...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGTTCTGGATGTTGTATTaGGTGAACAGTCCCGACTGC | + |
Preference number: 4 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLFWMLY*VNSPDC Trigger: GCAGTCGGGACTGTTCACGCAATACAACATCCAGAA...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATCAAGTCGCTTTCCATaGTCCGGAGGTATAGCATAC | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKSSRFP*SGGIAY Trigger: GTATGCTATACCTCCGGAGCATGGAAAGCGACTTGA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATTAGGAGACTTTGTCTaGCAAAGGTGGATGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKLGDFV*QRWMRG Trigger: GCCTCTCATCCACCTTTGGCAGACAAAGTCTCCTAA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGGGTGTCTACAGAAGATaGATTTCAATTTTAACCTCT | + |
Preference number: 4 (lower is better) Translates to: KIYINTPTGCWVMRLPLKGVYRR*ISILTS Trigger: AGAGGTTAAAATTGAAATGCATCTTCTGTAGACACC...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCACCCTTGGATTACATCTaGTCCATAAAATGTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPPLDYI*SIKCVF Trigger: GAAGACACATTTTATGGAGCAGATGTAATCCAAGGG...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTCATTATCTTACAGCTaGGATTTAGGGGACTCTCCA | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKSLSYS*DLGDSP Trigger: TGGAGAGTCCCCTAAATCCCAGCTGTAAGATAATGA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTGTGAAATTACAGCACTaGCTCTGTTGTCTTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICVKLQH*LCCLLV Trigger: CACCAGAAGACAACAGAGCCAGTGCTGTAATTTCAC...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTATTTGTGTCCGTTCTaGGACATTAGTGAATCGCAC | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKYLCPF*DISESH Trigger: GTGCGATTCACTAATGTCCCAGAACGGACACAAATA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTAGCCATCATCAAACATaGCCTCATAGAAGGTTTGAG | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICSHHQT*PHRRFE Trigger: CTCAAACCTTCTATGAGGTCATGTTTGATGATGGCT...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTCATCTGCTGAATTGGTaGTGGGATGAGCAAATTATC | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICHLLNW*WDEQII Trigger: GATAATTTGCTCATCCCAGCACCAATTCAGCAGATG...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATCTTGTCGAAGGGAATaGCATACTTCTTCAGCACTG | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKSCRRE*HTSSAL Trigger: CAGTGCTGAAGAAGTATGGCATTCCCTTCGACAAGA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGTTACTGATGAACTTATaGAACCTTTTCCCGAGAGCT | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKLLMNL*NLFPRA Trigger: AGCTCTCGGGAAAAGGTTGCATAAGTTCATCAGTAA...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCAACTTCTTCGTCAATaGTTAGAACCTCAGGCAATT | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKQLLRQ*LEPQAI Trigger: AATTGCCTGAGGTTCTAAGCATTGACGAAGAAGTTG...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGGCAGAGACAGCATTCTaGAGTCCATGCATTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLAETAF*SPCISL Trigger: AAGAGAAATGCATGGACTGCAGAATGCTGTCTCTGC...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCACTCTTCATTGCAATCTaGGATCCATCTTCAAATTCA | + |
Preference number: 4 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPLFIAI*DPSSNS Trigger: TGAATTTGAAGATGGATCGCAGATTGCAATGAAGAG...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCTGCTGAATTGGTGCTaGGATGAGCAAATTATCAAT | + |
Preference number: 4 (lower is better) Translates to: TEATNMSLLGCLVIKLQKLLNWC*DEQIIN Trigger: ATTGATAATTTGCTCATCCCAGCACCAATTCAGCAG...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATTCTGGAGTAGATTCTaGAGTGGGCTTTGTATGGTC | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKFWSRF*SGLCMV Trigger: GACCATACAAAGCCCACTCCAGAATCTACTCCAGAA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR TCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAAAGCCATCATCAAACATaGCCTCATAGAAGGTTTGAG | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKSHHQT*PHRRFE Trigger: CTCAAACCTTCTATGAGGTCATGTTTGATGATGGCT...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTCATTTTCTTCTTTGCTaGTATCAGGCTTGTAGTACG | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICHFLLC*YQACST Trigger: CGTACTACAAGCCTGATAGCAGCAAAGAAGAAAATG...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAATCATTATCTTACAGCTaGGATTTAGGGGACTCTCCA | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKSLSYS*DLGDSP Trigger: TGGAGAGTCCCCTAAATCCCAGCTGTAAGATAATGA...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTGAGCCTTTACTCTCTTaGGTAACTCTTCATCTAAAG | + |
Preference number: 4 (lower is better) Translates to: CTREDSIQVNPITIHAICEPLLS*VTLHLK Trigger: CTTTAGATGAAGAGTTACCCAAGAGAGTAAAGGCTC...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACACCCTCATCATAAATaGTCCCATTTATATCTGCTC | + |
Preference number: 4 (lower is better) Translates to: DQITEATNMSLLGCLVIKHPHHK*SHLYLL Trigger: GAGCAGATATAAATGGGAGCATTTATGATGAGGGTG...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGTCAAGGTTACTTCCATaGCCCTCTTCATCATTTTCT | + |
Preference number: 4 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLSRLLP*PSSSFS Trigger: AGAAAATGATGAAGAGGGCCATGGAAGTAACCTTGA...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR GCA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGCTCTTCATTGCAATCTaGGATCCATCTTCAAATTCA | + |
Preference number: 4 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLLFIAI*DPSSNS Trigger: TGAATTTGAAGATGGATCGCAGATTGCAATGAAGAG...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCGCTCGATGGGCTCCTTaGGATTCCATGTATGCGAGG | + |
Preference number: 5 (lower is better) Translates to: PKAVPLSSLFWSELHCGCARWAP*DSMYAR Trigger: CCTCGCATACATGGAATCCAAAGGAGCCCATCGAGC...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGGGCTTTTCAGTGACTTaGAGGTGCCTAGGGCCCATG | + |
Preference number: 5 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWGFSVT*RCLGPM Trigger: CATGGGCCCTAGGCACCTCAAAGTCACTGAAAAGCC...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCCTTCTGGATGTTGTATaGCGTGAACAGTCCCGACTG | + |
Preference number: 5 (lower is better) Translates to: PKAVPLSSLFWSELHCGCLLDVV*REQSRL Trigger: CAGTCGGGACTGTTCACGCAATACAACATCCAGAAG...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGCTCGATGGGCTCCTTaGGATTCCATGTATGCGAGG | + |
Preference number: 5 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTARWAP*DSMYAR Trigger: CCTCGCATACATGGAATCCAAAGGAGCCCATCGAGC...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCATCAGGCCATTTGACTaGGATGACTTCTCCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFIRPFD*DDFSLR Trigger: GCGGAGGGAGAAGTCATCCAAGTCAAATGGCCTGAT...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTCCACATACTCATTCTaGAGCCTGGAGCTTAGCACT | + |
Preference number: 5 (lower is better) Translates to: PKAVPLSSLFWSELHCGCSTYSF*SLELST Trigger: AGTGCTAAGCTCCAGGCTCAAGAATGAGTATGTGGA...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | AGGCAATTCTTCATCACTCGCTACCTGCTGCTTCACAAGTGTCATTaGGGATCTGGCCGGAGGCTTACCAAGTGGATGGCGCCAACTCTT | + |
Preference number: 5 (lower is better) Translates to: RQFFITRYLLLHKCH*GSGRRLTKWMAPTL Trigger: AAGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGATGAAGAATTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCATGTATGCGAGGTATTaGTTGAACTCCCGAAACTCC | + |
Preference number: 5 (lower is better) Translates to: PKAVPLSSLFWSELHCGCMYARY*LNSRNS Trigger: GGAGTTTCGGGAGTTCAACAAATACCTCGCATACAT...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAGTCCATGCATTTCTCTaGCACCGGGCACACAGCCAT | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSVHAFL*HRAHSH Trigger: ATGGCTGTGTGCCCGGTGCAAGAGAAATGCATGGAC...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTTACCATCAGGCCATTaGACTTGGATGACTTCTCCC | + |
Preference number: 5 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWLPSGH*TWMTSP Trigger: GGGAGAAGTCATCCAAGTCAAATGGCCTGATGGTAA...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTACAGCACTGGCTCTGTaGTCTTCTGGTGGAATTTCA | + |
Preference number: 5 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTTALAL*SSGGIS Trigger: TGAAATTCCACCAGAAGACAACAGAGCCAGTGCTGT...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCAGTTTGGCTCCATTTTaGCAACAGTTGCATTGTACT | + |
Preference number: 5 (lower is better) Translates to: PKAVPLSSLFWSELHCGCSLAPF*QQLHCT Trigger: AGTACAATGCAACTGTTGCAAAAATGGAGCCAAACT...GCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCACCTCTTCCTCTCCCCTaGGATTACATCTGCTCCATA | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSPLPLP*DYICSI Trigger: TATGGAGCAGATGTAATCCAAGGGGAGAGGAAGAGG...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 90 bp | TGGCTTTTCAGTGACTTTGAGGTGCCTAGGGCCCATGGCAGGGTTTaGACCCTCTTCCCCACTAAATTCAGCAAATTCCTCATCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: WLFSDFEVPRAHGRV*TLFPTKFSKFLIFF Trigger: GAAGAAGATGAGGAATTTGCTGAATTTAGTGGGGAAGAGGGTGCAAACCCTGCCATGGGCCCTAGGCACCTCAAAGTCACTGAAAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCTCTGTCTACATCTATTaGTGTCCGTTCTGGGACATT | + |
Preference number: 5 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFSVYIY*CPFWDI Trigger: AATGTCCCAGAACGGACACAAATAGATGTAGACAGA...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGGGTGATGAGGCTGCCACTGAAGGAGGTGGGAAAGGAGCCTCCAAATGTGTTCGACCTCATAGAAGGTTaGAGATGTCACATCTATCAC | + |
Preference number: 5 (lower is better) Translates to: WVMRLPLKEVGKEPPNVFDLIEG*RCHIYH Trigger: GTGATAGATGTGACATCTCAAACCTTCTATGAGGTC...GAACACATTTGGAGGCTCCTTTCCCACCTCCTTCAGTGGCAGCCTCATCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCATCCACATACTCATTCTaGAGCCTGGAGCTTAGCACT | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSSTYSF*SLELST Trigger: AGTGCTAAGCTCCAGGCTCAAGAATGAGTATGTGGA...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS TCA 90 bp | TCTTCAGGAAAGTACGATACACAGGGTCATCCACATACTCATTCTTaGGCCTGGAGCTTAGCACTCTTTGCCTCTTCCTCTCCCCTTGGA | + |
Preference number: 5 (lower is better) Translates to: SSGKYDTQGHPHTHS*AWSLALFASSSPLG Trigger: TCCAAGGGGAGAGGAAGAGGCAAAGAGTGCTAAGCTCCAGGCTCAAGAATGAGTATGTGGATGACCCTGTGTATCGTACTTTCCTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | CTGCTTCACAAGTGTCATTGGGGATCTGGCCGGAGGCTTACCAAGTaGATGGCGCCAACTCTTAGTAGTTTTTGGCTGTCCTTCAATTAT | + |
Preference number: 5 (lower is better) Translates to: LLHKCHWGSGRRLTK*MAPTLSSFWLSFNY Trigger: ATAATTGAAGGACAGCCAAAAACTACTAAGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAATGTATGCGAGGTATTaGTTGAACTCCCGAAACTCC | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSMYARY*LNSRNS Trigger: GGAGTTTCGGGAGTTCAACAAATACCTCGCATACAT...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTTTGCCCTGTAAGCTCTaGGGAGGCTTTCTTAATTTT | + |
Preference number: 5 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTLPCKL*GGFLNF Trigger: AAAATTAAGAAAGCCTCCCAAGAGCTTACAGGGCAA...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | GCCACCTGTCCCAATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGATTATCTTAGGAATGTaGAGCCCATTTCTCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: ATCPNVYPKAVPLSSLFWIILGM*SPFLSS Trigger: TGAAGAGAGAAATGGGCTCAACATTCCTAAGATAAT...CCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACATTGGGACAGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 90 bp | TTGCGTGAACAGTCCCGACTGCCCTGTGACCATCTGCTGAATTGGTaGTGGGATGAGCAAATTATCAATATCATCATAGCACTGTCTTGG | + |
Preference number: 5 (lower is better) Translates to: LREQSRLPCDHLLNW*WDEQIINIIIALSW Trigger: CCAAGACAGTGCTATGATGATATTGATAATTTGCTCATCCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGACTGTTCACGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | CGTGAACAGTCCCGACTGCCCTGTGACCATCTGCTGAATTGGTGCTaGGATGAGCAAATTATCAATATCATCATAGCACTGTCTTGGCTT | + |
Preference number: 5 (lower is better) Translates to: REQSRLPCDHLLNWC*DEQIINIIIALSWL Trigger: AAGCCAAGACAGTGCTATGATGATATTGATAATTTGCTCATCCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGACTGTTCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | ATCAGGCTTGTAGTACGGCATGAGCAGAGTGCAGATGGCACAGTTTaGCTCCATTTTTGCAACAGTTGCATTGTACTCCTGTTCAGCCAT | + |
Preference number: 5 (lower is better) Translates to: IRLVVRHEQSADGTV*LHFCNSCIVLLFSH Trigger: ATGGCTGAACAGGAGTACAATGCAACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGCACTCTGCTCATGCCGTACTACAAGCCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | GAGAAGGGACACCATAACAACTTGCATGAACCCGCACGAAGCACTTaGCACAGGAAATCAGAAGACTTGTTCCATCTTCTTCAAGGAAGG | + |
Preference number: 5 (lower is better) Translates to: EKGHHNNLHEPARST*HRKSEDLFHLLQGR Trigger: CCTTCCTTGAAGAAGATGGAACAAGTCTTCTGATTTCCTGTGCCAAGTGCTTCGTGCGGGTTCATGCAAGTTGTTATGGTGTCCCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGATCAGGCCATTTGACTaGGATGACTTCTCCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: KIYINTPTGCWVMRLPLKIRPFD*DDFSLR Trigger: GCGGAGGGAGAAGTCATCCAAGTCAAATGGCCTGAT...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTGTACCCCAAGGCTGTCCCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTTTGATCCAAGATACTTaGCCCCATAGAGTTTACCAT | + |
Preference number: 5 (lower is better) Translates to: MCTPRLSLCLPSSGLSCTLIQDT*PHRVYH Trigger: ATGGTAAACTCTATGGGGCAAAGTATCTTGGATCAA...AGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGGGACAGCCTTGGGGTACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | GTATTGCGTGAACAGTCCCGACTGCCCTGTGACCATCTGCTGAATTaGTGCTGGGATGAGCAAATTATCAATATCATCATAGCACTGTCT | + |
Preference number: 5 (lower is better) Translates to: VLREQSRLPCDHLLN*CWDEQIINIIIALS Trigger: AGACAGTGCTATGATGATATTGATAATTTGCTCATCCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGACTGTTCACGCAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | TTCACAAGTGTCATTGGGGATCTGGCCGGAGGCTTACCAAGTGGATaGCGCCAACTCTTAGTAGTTTTTGGCTGTCCTTCAATTATCTTA | + |
Preference number: 5 (lower is better) Translates to: FTSVIGDLAGGLPSG*RQLLVVFGCPSIIL Trigger: TAAGATAATTGAAGGACAGCCAAAAACTACTAAGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGCTTGGAGTACAGTATTaGCTGCTGTTAGCCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: KIYINTPTGCWVMRLPLKLGVQY*LLLASC Trigger: GCAGCTGGCTAACAGCAGCAAATACTGTACTCCAAG...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAAGTTTGGCTCCATTTTaGCAACAGTTGCATTGTACT | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSSLAPF*QQLHCT Trigger: AGTACAATGCAACTGTTGCAAAAATGGAGCCAAACT...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAAGGAAATCAGAAGACTaGTTCCATCTTCTTCAAGGA | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSRKSED*FHLLQG Trigger: TCCTTGAAGAAGATGGAACAAGTCTTCTGATTTCCT...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | CCTTTGTCTTCCCTCTTCTGGTCTGAGCTGCACTGTGGCTGCTGCACATTATCAACATATAGGCAACATTaGATCCAAGATACTTTGCCC | + |
Preference number: 5 (lower is better) Translates to: PLSSLFWSELHCGCCTLSTYRQH*IQDTLP Trigger: GGGCAAAGTATCTTGGATCAAATGTTGCCTATATGT...TGATAATGTGCAGCAGCCACAGTGCAGCTCAGACCAGAAGAGGGAAGACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 90 bp | GTTGCATTGTACTCCTGTTCAGCCATAAAGTTAGGAGACTTTGTCTaGCAAAGGTGGATGAGAGGCTTTGCCCAAGACTCTGTTTCTTCA | + |
Preference number: 5 (lower is better) Translates to: VALYSCSAIKLGDFV*QRWMRGFAQDSVSS Trigger: TGAAGAAACAGAGTCTTGGGCAAAGCCTCTCATCCACCTTTGGCAGACAAAGTCTCCTAACTTTATGGCTGAACAGGAGTACAATGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 90 bp | GAGCAGAGTGCAGATGGCACAGTTTGGCTCCATTTTTGCAACAGTTaGATTGTACTCCTGTTCAGCCATAAAGTTAGGAGACTTTGTCTG | + |
Preference number: 5 (lower is better) Translates to: EQSADGTVWLHFCNS*IVLLFSHKVRRLCL Trigger: CAGACAAAGTCTCCTAACTTTATGGCTGAACAGGAGTACAATGCAACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGCACTCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | TACTCCTGTTCAGCCATAAAGTTAGGAGACTTTGTCTGCCAAAGGTaGATGAGAGGCTTTGCCCAAGACTCTGTTTCTTCAACTTCTTCG | + |
Preference number: 5 (lower is better) Translates to: YSCSAIKLGDFVCQR*MRGFAQDSVSSTSS Trigger: CGAAGAAGTTGAAGAAACAGAGTCTTGGGCAAAGCCTCTCATCCACCTTTGGCAGACAAAGTCTCCTAACTTTATGGCTGAACAGGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGGGCTTTTCAGTGACTTaGAGGTGCCTAGGGCCCATG | + |
Preference number: 5 (lower is better) Translates to: TEATNMSLLGCLVIKLQKGFSVT*RCLGPM Trigger: CATGGGCCCTAGGCACCTCAAAGTCACTGAAAAGCC...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAACCCGCACGAAGCACTaGGCACAGGAAATCAGAAGA | + |
Preference number: 5 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPTRTKH*AQEIRR Trigger: TCTTCTGATTTCCTGTGCCAAGTGCTTCGTGCGGGT...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 90 bp | TATTTGTGTCCGTTCTGGGACATTAGTGAATCGCACTTCTGGAACTaGAACAGCACATATGACATGAGCCCACTGATTGTTCTTAGTCTG | + |
Preference number: 5 (lower is better) Translates to: YLCPFWDISESHFWN*NSTYDMSPLIVLSL Trigger: CAGACTAAGAACAATCAGTGGGCTCATGTCATATGTGCTGTTGCAGTTCCAGAAGTGCGATTCACTAATGTCCCAGAACGGACACAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTGTCCATGCATTTCTCTaGCACCGGGCACACAGCCAT | + |
Preference number: 5 (lower is better) Translates to: CTREDSIQVNPITIHAICVHAFL*HRAHSH Trigger: ATGGCTGTGTGCCCGGTGCAAGAGAAATGCATGGAC...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 90 bp | CTCTGTTGTCTTCTGGTGGAATTTCAGCTGTTACTGATGAACTTATaGAACCTTTTCCCGAGAGCTTGGTGTCGTTCAGTAAGCTTTGAT | + |
Preference number: 5 (lower is better) Translates to: LCCLLVEFQLLLMNL*NLFPRAWCRSVSFD Trigger: ATCAAAGCTTACTGAACGACACCAAGCTCTCGGGAAAAGGTTGCATAAGTTCATCAGTAACAGCTGAAATTCCACCAGAAGACAACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | CCGAGAGCTTGGTGTCGTTCAGTAAGCTTTGATCCACTTGTATCCTaGTATCCAAAGCTTCTTTTGCTGAAGATTCTTCTAATTTCCCCA | + |
Preference number: 5 (lower is better) Translates to: PRAWCRSVSFDPLVS*YPKLLLLKILLISP Trigger: TGGGGAAATTAGAAGAATCTTCAGCAAAAGAAGCTTTGGATACCAGGATACAAGTGGATCAAAGCTTACTGAACGACACCAAGCTCTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 90 bp | TACATCTATTTGTGTCCGTTCTGGGACATTAGTGAATCGCACTTCTaGAACTGCAACAGCACATATGACATGAGCCCACTGATTGTTCTT | + |
Preference number: 5 (lower is better) Translates to: YIYLCPFWDISESHF*NCNSTYDMSPLIVL Trigger: AAGAACAATCAGTGGGCTCATGTCATATGTGCTGTTGCAGTTCCAGAAGTGCGATTCACTAATGTCCCAGAACGGACACAAATAGATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCTTGGAGTACAGTATTaGCTGCTGTTAGCCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: TEATNMSLLGCLVIKLQKLGVQY*LLLASC Trigger: GCAGCTGGCTAACAGCAGCAAATACTGTACTCCAAG...CTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAACAGCACTGGCTCTGTaGTCTTCTGGTGGAATTTCA | + |
Preference number: 5 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPTALAL*SSGGIS Trigger: TGAAATTCCACCAGAAGACAACAGAGCCAGTGCTGT...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGTCTGTCTACATCTATTaGTGTCCGTTCTGGGACATT | + |
Preference number: 5 (lower is better) Translates to: KIYINTPTGCWVMRLPLKSVYIY*CPFWDI Trigger: AATGTCCCAGAACGGACACAAATAGATGTAGACAGA...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGGATTTCGCGTTTGAGTaGACTCTATGTCTGAAGCAT | + |
Preference number: 5 (lower is better) Translates to: KIYINTPTGCWVMRLPLKDFAFE*TLCLKH Trigger: ATGCTTCAGACATAGAGTCAACTCAAACGCGAAATC...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGGACCTCATAGAAGGTTaGAGATGTCACATCTATCAC | + |
Preference number: 5 (lower is better) Translates to: KIYINTPTGCWVMRLPLKDLIEG*RCHIYH Trigger: GTGATAGATGTGACATCTCAAACCTTCTATGAGGTC...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCATTACCATCAGGCCATTaGACTTGGATGACTTCTCCC | + |
Preference number: 5 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPLPSGH*TWMTSP Trigger: GGGAGAAGTCATCCAAGTCAAATGGCCTGATGGTAA...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | AAAATATATATAAATACACCCACCGGCTGTTGGGTGATGAGGCTGCCACTGAAGAGGAAATCAGAAGACTaGTTCCATCTTCTTCAAGGA | + |
Preference number: 5 (lower is better) Translates to: KIYINTPTGCWVMRLPLKRKSED*FHLLQG Trigger: TCCTTGAAGAAGATGGAACAAGTCTTCTGATTTCCT...CTTCAGTGGCAGCCTCATCACCCAACAGCCGGTGGGTGTATTTATATATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAAACCCGCACGAAGCACTaGGCACAGGAAATCAGAAGA | + |
Preference number: 5 (lower is better) Translates to: DQITEATNMSLLGCLVIKTRTKH*AQEIRR Trigger: TCTTCTGATTTCCTGTGCCAAGTGCTTCGTGCGGGT...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TTCAGAACAGGAATTATGAAGTGTTCAAAATATCAGGCCAAGATTTTTCCTCTGGCACCTCCCCTCAAATaGCAGAGACAGCATTCTGCA | + |
Preference number: 5 (lower is better) Translates to: FRTGIMKCSKYQAKIFPLAPPLK*QRQHSA Trigger: TGCAGAATGCTGTCTCTGCAATTTGAGGGGAGGTGC...CAGAGGAAAAATCTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTCCTCTTCCTCTCCCCTaGGATTACATCTGCTCCATA | + |
Preference number: 5 (lower is better) Translates to: CTREDSIQVNPITIHAICPLPLP*DYICSI Trigger: TATGGAGCAGATGTAATCCAAGGGGAGAGGAAGAGG...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCATTGCCCTGTAAGCTCTaGGGAGGCTTTCTTAATTTT | + |
Preference number: 5 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPLPCKL*GGFLNF Trigger: AAAATTAAGAAAGCCTCCCAAGAGCTTACAGGGCAA...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | ATGTCTCTTCTTGGTTGCTTGGTAATCAAACTCCAGAAGCCTGGTTTATTACCAATTATCTTAGGAATGTaGAGCCCATTTCTCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: MSLLGCLVIKLQKPGLLPIILGM*SPFLSS Trigger: TGAAGAGAGAAATGGGCTCAACATTCCTAAGATAAT...TGGTAATAAACCAGGCTTCTGGAGTTTGATTACCAAGCAACCAAGAAGAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTCATAATCCAAGTATCTaGGAGTACAGTATTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: CTREDSIQVNPITIHAICHNPSI*EYSICC Trigger: GCAGCAAATACTGTACTCCAAGATACTTGGATTATG...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAAGATTTCGCGTTTGAGTaGACTCTATGTCTGAAGCAT | + |
Preference number: 5 (lower is better) Translates to: DQITEATNMSLLGCLVIKDFAFE*TLCLKH Trigger: ATGCTTCAGACATAGAGTCAACTCAAACGCGAAATC...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTTTGATCCAAGATACTTaGCCCCATAGAGTTTACCAT | + |
Preference number: 5 (lower is better) Translates to: CTREDSIQVNPITIHAICLIQDT*PHRVYH Trigger: ATGGTAAACTCTATGGGGCAAAGTATCTTGGATCAA...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | TGTACAAGGGAAGATAGCATACAGGTAAATCCTATTACCATACATGCCATTTGTACATATAGGCAACATTaGATCCAAGATACTTTGCCC | + |
Preference number: 5 (lower is better) Translates to: CTREDSIQVNPITIHAICTYRQH*IQDTLP Trigger: GGGCAAAGTATCTTGGATCAAATGTTGCCTATATGT...ACAAATGGCATGTATGGTAATAGGATTTACCTGTATGCTATCTTCCCTTGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS-3UTR CAA 90 bp | GATCAGATTACAGAAGCAACTAATATGTCTCTTCTTGGTTGCTTGGTAATCAAACATAATCCAAGTATCTaGGAGTACAGTATTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: DQITEATNMSLLGCLVIKHNPSI*EYSICC Trigger: GCAGCAAATACTGTACTCCAAGATACTTGGATTATG...TTTGATTACCAAGCAACCAAGAAGAGACATATTAGTTGCTTCTGTAATCTGATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TCGCTACCTGCTGCTTCACAAGTGTCATTGGGGATCTaGCCGGAGGCTTACCAAGTGGATGGCGCCAACTCT | + |
Preference number: 6 (lower is better) Translates to: SLPAASQVSLGI*PEAYQVDGANS Trigger: AGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAAGCAGCAGGTAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TTCATCACTCGCTACCTGCTGCTTCACAAGTGTCATTaGGGATCTGGCCGGAGGCTTACCAAGTGGATGGCG | + |
Preference number: 6 (lower is better) Translates to: FITRYLLLHKCH*GSGRRLTKWMA Trigger: CGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | CTTCATCACTCGCTACCTGCTGCTTCACAAGTGTCATaGGGGATCTGGCCGGAGGCTTACCAAGTGGATGGC | + |
Preference number: 6 (lower is better) Translates to: LHHSLPAASQVS*GIWPEAYQVDG Trigger: GCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 90 bp | CAGGCAATTCTTCATCACTCGCTACCTGCTGCTTCACAAGTGTCATaGGGGATCTGGCCGGAGGCTTACCAAGTGGATGGCGCCAACTCT | + |
Preference number: 6 (lower is better) Translates to: QAILHHSLPAASQVS*GIWPEAYQVDGANS Trigger: AGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGATGAAGAATTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS TCA 72 bp | TGGTATGCAGTCAGCGCCCTCCTTCAGCTGAGATGGTaGAATTACAGCACTGGCTCTGTTGTCTTCTGGTGG | + |
Preference number: 6 (lower is better) Translates to: WYAVSALLQLRW*NYSTGSVVFWW Trigger: CCACCAGAAGACAACAGAGCCAGTGCTGTAATTTCACCATCTCAGCTGAAGGAGGGCGCTGACTGCATACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | AGTGACTTTGAGGTGCCTAGGGCCCATGGCAGGGTTTaGACCCTCTTCCCCACTAAATTCAGCAAATTCCTC | + |
Preference number: 6 (lower is better) Translates to: SDFEVPRAHGRV*TLFPTKFSKFL Trigger: GAGGAATTTGCTGAATTTAGTGGGGAAGAGGGTGCAAACCCTGCCATGGGCCCTAGGCACCTCAAAGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | CACCATGTCATTCCGACAAGTGCACTTGGCAAGACCTaGTCGATGGGCTCCTTTGGATTCCATGTATGCGAG | + |
Preference number: 6 (lower is better) Translates to: HHVIPTSALGKT*SMGSFGFHVCE Trigger: CTCGCATACATGGAATCCAAAGGAGCCCATCGAGCAGGTCTTGCCAAGTGCACTTGTCGGAATGACATGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149295.2 |
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CDS CCA 72 bp | GTCATTGGGGATCTGGCCGGAGGCTTACCAAGTGGATaGCGCCAACTCTTAGTAGTTTTTGGCTGTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: VIGDLAGGLPSG*RQLLVVFGCPS Trigger: TGAAGGACAGCCAAAAACTACTAAGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | AAGTGTCATTGGGGATCTGGCCGGAGGCTTACCAAGTaGATGGCGCCAACTCTTAGTAGTTTTTGGCTGTCC | + |
Preference number: 6 (lower is better) Translates to: KCHWGSGRRLTK*MAPTLSSFWLS Trigger: GGACAGCCAAAAACTACTAAGAGTTGGCGCCATCCACTTGGTAAGCCTCCGGCCAGATCCCCAATGACACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | CCCAGCTTTAATGCTTTTTCTGGCTTTTCAGTGACTTaGAGGTGCCTAGGGCCCATGGCAGGGTTTGCACCC | + |
Preference number: 6 (lower is better) Translates to: PSFNAFSGFSVT*RCLGPMAGFAP Trigger: GGGTGCAAACCCTGCCATGGGCCCTAGGCACCTCAAAGTCACTGAAAAGCCAGAAAAAGCATTAAAGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | AAGAAGCCTTGGGCTAGTCTTTCAAGTCGCTTTCCATaGTCCGGAGGTATAGCATACCAAGACTTGGGCTCC | + |
Preference number: 6 (lower is better) Translates to: KKPWASLSSRFP*SGGIAYQDLGS Trigger: GGAGCCCAAGTCTTGGTATGCTATACCTCCGGAGCATGGAAAGCGACTTGAAAGACTAGCCCAAGGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | ACTCTTTGCCTGCTTGATGGCCATGAGAAAGTGGTATaGAGTCAGCGCCCTCCTTCAGCTGAGATGGTGAAA | + |
Preference number: 6 (lower is better) Translates to: TLCLLDGHEKVV*SQRPPSAEMVK Trigger: TTTCACCATCTCAGCTGAAGGAGGGCGCTGACTGCATACCACTTTCTCATGGCCATCAAGCAGGCAAAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | CTTAGAACCTCAGGCAATTCTTCATCACTCGCTACCTaGTGCTTCACAAGTGTCATTGGGGATCTGGCCGGA | + |
Preference number: 6 (lower is better) Translates to: LRTSGNSSSLAT*CFTSVIGDLAG Trigger: TCCGGCCAGATCCCCAATGACACTTGTGAAGCAGCAGGTAGCGAGTGATGAAGAATTGCCTGAGGTTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 90 bp | CTCTTCAGGAAAGTACGATACACAGGGTCATCCACATACTCATTCTaGAGCCTGGAGCTTAGCACTCTTTGCCTCTTCCTCTCCCCTTGG | + |
Preference number: 6 (lower is better) Translates to: LFRKVRYTGSSTYSF*SLELSTLCLFLSPW Trigger: CCAAGGGGAGAGGAAGAGGCAAAGAGTGCTAAGCTCCAGGCTCAAGAATGAGTATGTGGATGACCCTGTGTATCGTACTTTCCTGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | TTTAATGCTTTTTCTGGCTTTTCAGTGACTTTGAGGTaGCTAGGGCCCATGGCAGGGTTTGCACCCTCTTCC | + |
Preference number: 6 (lower is better) Translates to: FNAFSGFSVTLR*LGPMAGFAPSS Trigger: GGAAGAGGGTGCAAACCCTGCCATGGGCCCTAGGCACCTCAAAGTCACTGAAAAGCCAGAAAAAGCATTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TCATTCCGACAAGTGCACTTGGCAAGACCTGCTCGATaGGCTCCTTTGGATTCCATGTATGCGAGGTATTTG | + |
Preference number: 6 (lower is better) Translates to: SFRQVHLARPAR*APLDSMYARYL Trigger: CAAATACCTCGCATACATGGAATCCAAAGGAGCCCATCGAGCAGGTCTTGCCAAGTGCACTTGTCGGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149295.2 |
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CDS CAA 72 bp | CGATGGGCTCCTTTGGATTCCATGTATGCGAGGTATTaGTTGAACTCCCGAAACTCCTCCATGGAAGGTCTG | + |
Preference number: 6 (lower is better) Translates to: RWAPLDSMYARY*LNSRNSSMEGL Trigger: CAGACCTTCCATGGAGGAGTTTCGGGAGTTCAACAAATACCTCGCATACATGGAATCCAAAGGAGCCCATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 ENSMUST00000149295.2 |
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CDS CAA 90 bp | AGACCTGCTCGATGGGCTCCTTTGGATTCCATGTATGCGAGGTATTaGTTGAACTCCCGAAACTCCTCCATGGAAGGTCTGAAGGTCATT | + |
Preference number: 6 (lower is better) Translates to: RPARWAPLDSMYARY*LNSRNSSMEGLKVI Trigger: AATGACCTTCAGACCTTCCATGGAGGAGTTTCGGGAGTTCAACAAATACCTCGCATACATGGAATCCAAAGGAGCCCATCGAGCAGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 ENSMUST00000149295.2 |
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CDS TCA 72 bp | TGCGTGAACAGTCCCGACTGCCCTGTGACCATCTGCTaGATTGGTGCTGGGATGAGCAAATTATCAATATCA | + |
Preference number: 6 (lower is better) Translates to: CVNSPDCPVTIC*IGAGMSKLSIS Trigger: TGATATTGATAATTTGCTCATCCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGACTGTTCACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | CGCCCTCCTTCAGCTGAGATGGTGAAATTACAGCACTaGCTCTGTTGTCTTCTGGTGGAATTTCAGCTGTTA | + |
Preference number: 6 (lower is better) Translates to: RPPSAEMVKLQH*LCCLLVEFQLL Trigger: TAACAGCTGAAATTCCACCAGAAGACAACAGAGCCAGTGCTGTAATTTCACCATCTCAGCTGAAGGAGGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | GCTTCTGGGATTTCCCCAGGCTCAAGGTTACTTCCATaGCCCTCTTCATCATTTTCTTCTCCCTCTGTCAAT | + |
Preference number: 6 (lower is better) Translates to: ASGISPGSRLLP*PSSSFSSPSVN Trigger: ATTGACAGAGGGAGAAGAAAATGATGAAGAGGGCCATGGAAGTAACCTTGAGCCTGGGGAAATCCCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | GTAGTACGGCATGAGCAGAGTGCAGATGGCACAGTTTaGCTCCATTTTTGCAACAGTTGCATTGTACTCCTG | + |
Preference number: 6 (lower is better) Translates to: VVRHEQSADGTV*LHFCNSCIVLL Trigger: CAGGAGTACAATGCAACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGCACTCTGCTCATGCCGTACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TTGTGTCCGTTCTGGGACATTAGTGAATCGCACTTCTaGAACTGCAACAGCACATATGACATGAGCCCACTG | + |
Preference number: 6 (lower is better) Translates to: LCPFWDISESHF*NCNSTYDMSPL Trigger: CAGTGGGCTCATGTCATATGTGCTGTTGCAGTTCCAGAAGTGCGATTCACTAATGTCCCAGAACGGACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS TCA 72 bp | AAGTACGATACACAGGGTCATCCACATACTCATTCTTaGGCCTGGAGCTTAGCACTCTTTGCCTCTTCCTCT | + |
Preference number: 6 (lower is better) Translates to: KYDTQGHPHTHS*AWSLALFASSS Trigger: AGAGGAAGAGGCAAAGAGTGCTAAGCTCCAGGCTCAAGAATGAGTATGTGGATGACCCTGTGTATCGTACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | CCGTTCTGGGACATTAGTGAATCGCACTTCTGGAACTaGAACAGCACATATGACATGAGCCCACTGATTGTT | + |
Preference number: 6 (lower is better) Translates to: PFWDISESHFWN*NSTYDMSPLIV Trigger: AACAATCAGTGGGCTCATGTCATATGTGCTGTTGCAGTTCCAGAAGTGCGATTCACTAATGTCCCAGAACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TCCCGACTGCCCTGTGACCATCTGCTGAATTGGTGCTaGGATGAGCAAATTATCAATATCATCATAGCACTG | + |
Preference number: 6 (lower is better) Translates to: SRLPCDHLLNWC*DEQIINIIIAL Trigger: CAGTGCTATGATGATATTGATAATTTGCTCATCCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | AAAGTACGATACACAGGGTCATCCACATACTCATTCTaGAGCCTGGAGCTTAGCACTCTTTGCCTCTTCCTC | + |
Preference number: 6 (lower is better) Translates to: KVRYTGSSTYSF*SLELSTLCLFL Trigger: GAGGAAGAGGCAAAGAGTGCTAAGCTCCAGGCTCAAGAATGAGTATGTGGATGACCCTGTGTATCGTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | AGGAGACTTTGTCTGCCAAAGGTGGATGAGAGGCTTTaGCCAAGACTCTGTTTCTTCAACTTCTTCGTCAAT | + |
Preference number: 6 (lower is better) Translates to: RRLCLPKVDERL*PRLCFFNFFVN Trigger: ATTGACGAAGAAGTTGAAGAAACAGAGTCTTGGGCAAAGCCTCTCATCCACCTTTGGCAGACAAAGTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | GAACAGTCCCGACTGCCCTGTGACCATCTGCTGAATTaGTGCTGGGATGAGCAAATTATCAATATCATCATA | + |
Preference number: 6 (lower is better) Translates to: EQSRLPCDHLLN*CWDEQIINIII Trigger: TATGATGATATTGATAATTTGCTCATCCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGACTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | CACCATAACAACTTGCATGAACCCGCACGAAGCACTTaGCACAGGAAATCAGAAGACTTGTTCCATCTTCTT | + |
Preference number: 6 (lower is better) Translates to: HHNNLHEPARST*HRKSEDLFHLL Trigger: AAGAAGATGGAACAAGTCTTCTGATTTCCTGTGCCAAGTGCTTCGTGCGGGTTCATGCAAGTTGTTATGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 90 bp | AGAGTGCAGATGGCACAGTTTGGCTCCATTTTTGCAACAGTTGCATaGTACTCCTGTTCAGCCATAAAGTTAGGAGACTTTGTCTGCCAA | + |
Preference number: 6 (lower is better) Translates to: RVQMAQFGSIFATVA*YSCSAIKLGDFVCQ Trigger: TTGGCAGACAAAGTCTCCTAACTTTATGGCTGAACAGGAGTACAATGCAACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGCACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS TCA 72 bp | CCTTTTCCCGAGAGCTTGGTGTCGTTCAGTAAGCTTTaGTCCACTTGTATCCTGGTATCCAAAGCTTCTTTT | + |
Preference number: 6 (lower is better) Translates to: PFPESLVSFSKL*STCILVSKASF Trigger: AAAAGAAGCTTTGGATACCAGGATACAAGTGGATCAAAGCTTACTGAACGACACCAAGCTCTCGGGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS GCA 72 bp | GCAGATGGCACAGTTTGGCTCCATTTTTGCAACAGTTaGATTGTACTCCTGTTCAGCCATAAAGTTAGGAGA | + |
Preference number: 6 (lower is better) Translates to: ADGTVWLHFCNS*IVLLFSHKVRR Trigger: TCTCCTAACTTTATGGCTGAACAGGAGTACAATGCAACTGTTGCAAAAATGGAGCCAAACTGTGCCATCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TTACTGATGAACTTATGCAACCTTTTCCCGAGAGCTTaGTGTCGTTCAGTAAGCTTTGATCCACTTGTATCC | + |
Preference number: 6 (lower is better) Translates to: LLMNLCNLFPRA*CRSVSFDPLVS Trigger: GGATACAAGTGGATCAAAGCTTACTGAACGACACCAAGCTCTCGGGAAAAGGTTGCATAAGTTCATCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | GTAGTTTTTGGCTGTCCTTCAATTATCTTAGGAATGTaGAGCCCATTTCTCTCTTCACTAAGAGCTTCTGGG | + |
Preference number: 6 (lower is better) Translates to: VVFGCPSIILGM*SPFLSSLRASG Trigger: CCCAGAAGCTCTTAGTGAAGAGAGAAATGGGCTCAACATTCCTAAGATAATTGAAGGACAGCCAAAAACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | ATGGCACAGTTTGGCTCCATTTTTGCAACAGTTGCATaGTACTCCTGTTCAGCCATAAAGTTAGGAGACTTT | + |
Preference number: 6 (lower is better) Translates to: MAQFGSIFATVA*YSCSAIKLGDF Trigger: AAAGTCTCCTAACTTTATGGCTGAACAGGAGTACAATGCAACTGTTGCAAAAATGGAGCCAAACTGTGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | ATGGCTTTCTCACAAGTTTTGGATTTCGCGTTTGAGTaGACTCTATGTCTGAAGCATGTGATGTTTACCACG | + |
Preference number: 6 (lower is better) Translates to: MAFSQVLDFAFE*TLCLKHVMFTT Trigger: CGTGGTAAACATCACATGCTTCAGACATAGAGTCAACTCAAACGCGAAATCCAAAACTTGTGAGAAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 90 bp | CAACTCTTAGTAGTTTTTGGCTGTCCTTCAATTATCTTAGGAATGTaGAGCCCATTTCTCTCTTCACTAAGAGCTTCTGGGATTTCCCCA | + |
Preference number: 6 (lower is better) Translates to: QLLVVFGCPSIILGM*SPFLSSLRASGISP Trigger: TGGGGAAATCCCAGAAGCTCTTAGTGAAGAGAGAAATGGGCTCAACATTCCTAAGATAATTGAAGGACAGCCAAAAACTACTAAGAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CCA 72 bp | TGGTGTCGTTCAGTAAGCTTTGATCCACTTGTATCCTaGTATCCAAAGCTTCTTTTGCTGAAGATTCTTCTA | + |
Preference number: 6 (lower is better) Translates to: WCRSVSFDPLVS*YPKLLLLKILL Trigger: TAGAAGAATCTTCAGCAAAAGAAGCTTTGGATACCAGGATACAAGTGGATCAAAGCTTACTGAACGACACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 90 bp | TCAGTAAGCTTTGATCCACTTGTATCCTGGTATCCAAAGCTTCTTTaGCTGAAGATTCTTCTAATTTCCCCAGCTTTAATGCTTTTTCTG | + |
Preference number: 6 (lower is better) Translates to: SVSFDPLVSWYPKLL*LKILLISPALMLFL Trigger: CAGAAAAAGCATTAAAGCTGGGGAAATTAGAAGAATCTTCAGCAAAAGAAGCTTTGGATACCAGGATACAAGTGGATCAAAGCTTACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |
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CDS CAA 72 bp | TTTGATCCACTTGTATCCTGGTATCCAAAGCTTCTTTaGCTGAAGATTCTTCTAATTTCCCCAGCTTTAATG | + |
Preference number: 6 (lower is better) Translates to: FDPLVSWYPKLL*LKILLISPALM Trigger: CATTAAAGCTGGGGAAATTAGAAGAATCTTCAGCAAAAGAAGCTTTGGATACCAGGATACAAGTGGATCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030102.12 ENSMUST00000077851.10 |