RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM3B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038773

Ensembl transcript IDs: ENSMUST00000043775.9, ENSMUST00000224715.2, ENSMUST00000225195.2

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATCCTGGAGCCTCCTGGGAAAAGCAGTGGGCTCTCCCTGGGTCCTaGAGACTCCGGTGTTCATGGAGAGTACGGGAAGGGCTGCACCCC +
Preference number: 1 (lower is better)
Translates to: NPGASWEKQWALPGS*RLRCSWRVREGLHP
Trigger: GGGGTGCAGCCCTTCCCGTACTCTCCATGAACACCGGAGTCTTCAGGACCCAGGGAGAGCCCACTGCTTTTCCCAGGAGGCTCCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 90 bp CGTTTGGACACACATGAGGAGTCCCAAGGGAACGCTGGTAATTGGTaGCACAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCC +
Preference number: 1 (lower is better)
Translates to: RLDTHEESQGNAGNW*HSSWGQQFTCREHS
Trigger: GGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTGTGTCACCAATTACCAGCGTTCCCTTGGGACTCCTCATGTGTGTCCAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR GCA 90 bp GGCCTGCTTGACAGGAGAGCTGAAGTACCCCAGGTTTTAGGACCTTaGGAGCTTGGATTCGTGGGCCTTGAGAGTGCCGACAGCGTCTTT +
Preference number: 1 (lower is better)
Translates to: GLLDRRAEVPQVLGP*ELGFVGLESADSVF
Trigger: AAAGACGCTGTCGGCACTCTCAAGGCCCACGAATCCAAGCTCGCAAGGTCCTAAAACCTGGGGTACTTCAGCTCTCCTGTCAAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR GCA 90 bp GTTTGTAATACTGACCACACTGGCTTGGGGAAGGGCCTCTGCTCCTaGAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTG +
Preference number: 1 (lower is better)
Translates to: VCNTDHTGLGKGLCS*REPCRSLVSVVKGL
Trigger: CAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAGTATTACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 90 bp GCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGATaGGAATGTGGCACCCTCGGCTTGAGTCTGACACTGTGTGTCAAC +
Preference number: 1 (lower is better)
Translates to: AQQCSSNLDSQKATG*ECGTLGLSLTLCVN
Trigger: GTTGACACACAGTGTCAGACTCAAGCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 90 bp GAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTaGATGGGAATGTGGCACCCTCGGCTTGAGTCTGACACTGTGTGT +
Preference number: 1 (lower is better)
Translates to: ESPAMFKQPGFPKGH*MGMWHPRLESDTVC
Trigger: ACACACAGTGTCAGACTCAAGCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR GCA 90 bp GGAATGTGGCACCCTCGGCTTGAGTCTGACACTGTGTGTCAACAGTaGGACTTGCTTGTGTCACCCTTCAGTGTTGAGGCAGCACAGAAA +
Preference number: 1 (lower is better)
Translates to: GMWHPRLESDTVCQQ*DLLVSPFSVEAAQK
Trigger: TTTCTGTGCTGCCTCAACACTGAAGGGTGACACAAGCAAGTCGCACTGTTGACACACAGTGTCAGACTCAAGCCGAGGGTGCCACATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 90 bp ATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGATGGGAATGTaGCACCCTCGGCTTGAGTCTGACACTGTGTGTCAACAGTGCGAC +
Preference number: 1 (lower is better)
Translates to: MFKQPGFPKGHWMGM*HPRLESDTVCQQCD
Trigger: GTCGCACTGTTGACACACAGTGTCAGACTCAAGCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 90 bp CACTGTGTGTCAACAGTGCGACTTGCTTGTGTCACCCTTCAGTGTTaGGGCAGCACAGAAAGAGCGGCTGGAGTTTGTAATACTGACCAC +
Preference number: 1 (lower is better)
Translates to: HCVSTVRLACVTLQC*GSTERAAGVCNTDH
Trigger: GTGGTCAGTATTACAAACTCCAGCCGCTCTTTCTGTGCTGCCTCAACACTGAAGGGTGACACAAGCAAGTCGCACTGTTGACACACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 90 bp TGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATaGTGCAGTTCTTTCTCAGATGACTGCTCCCTCAAGATAAGACTG +
Preference number: 1 (lower is better)
Translates to: WGQQFTCREHSEAQT*CSSFSDDCSLKIRL
Trigger: CAGTCTTATCTTGAGGGAGCAGTCATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 90 bp CCTGTAGCTTATCCTCATGATTGGTGTGAGTGTTGGAGAGATGCCTaGATTCCTGAGTCAGGCGGAAACAGTGCTTCACGTGCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: PVAYPHDWCECWRDA*IPESGGNSASRALE
Trigger: CTCCAGAGCACGTGAAGCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCTCTCCAACACTCACACCAATCATGAGGATAAGCTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR GCA 90 bp GTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTaGAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAG +
Preference number: 1 (lower is better)
Translates to: VCPHSWFPWSQTRRM*RRAQQCSSNLDSQK
Trigger: CTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR GCA 90 bp ACATCCCTAGTTAGCCAGGCACAAGAGGAACAGGAAAGGAAGGTGTaGCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGC +
Preference number: 1 (lower is better)
Translates to: TSLVSQAQEEQERKV*PHSWFPWSQTRRMC
Trigger: GCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTTCCTGTTCCTCTTGTGCCTGGCTAACTAGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAGGGCCTCTGCTCCTaGAGAGAACCCTGCCGTTCC +
Preference number: 2 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVKGLCS*REPCRS
Trigger: GGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTT...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGCCCCATCTCCTAGGATaGGCCAGGTCAGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMPHLLG*ARSEVT
Trigger: CGTGACCTCTGACCTGGCCCATCCTAGGAGATGGGG...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR TCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGTCACCCTTCAGTGTTaGGGCAGCACAGAAAGAGCG +
Preference number: 2 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVVTLQC*GSTERA
Trigger: CGCTCTTTCTGTGCTGCCTCAACACTGAAGGGTGAC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTGGGGAAGGGCCTCTaGTCCTGCAGAGAACCCTGC +
Preference number: 2 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQLGKGL*SCREPC
Trigger: GCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCCCAA...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGCACGTGTGGAGACACTaGCAGGCTCTCACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQHVWRH*QALTRH
Trigger: GTGCCTGGTGAGAGCCTGGCAGTGTCTCCACACGTG...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGCTGACCACACTGGCTTaGGGAAGGGCCTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQLTTLA*GRASAP
Trigger: AGGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAG...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGCCCCATCTCCTAGGATaGGCCAGGTCAGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQPHLLG*ARSEVT
Trigger: CGTGACCTCTGACCTGGCCCATCCTAGGAGATGGGG...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CAA 90 bp AGCACAGAAAGAGCGGCTGGAGTTTGTAATACTGACCACACTGGCTaGGGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTG +
Preference number: 2 (lower is better)
Translates to: STERAAGVCNTDHTG*GKGLCSCREPCRSL
Trigger: CAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAGTATTACAAACTCCAGCCGCTCTTTCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGAATCCTGGAGCCTCCTaGGAAAAGCAGTGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMNPGAS*EKQWAL
Trigger: GAGAGCCCACTGCTTTTCCCAGGAGGCTCCAGGATT...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGGTCACCCTTCAGTGTTaGGGCAGCACAGAAAGAGCG +
Preference number: 2 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQVTLQC*GSTERA
Trigger: CGCTCTTTCTGTGCTGCCTCAACACTGAAGGGTGAC...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGCTCCTGGCTTCTCTTTaGCATCATGAATCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVLLASL*HHESSA
Trigger: AGCAGAGGATTCATGATGGCAAAGAGAAGCCAGGAG...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGTCTGGAGGATTCTCTTaGCCTTGCTCTTCTCCAACC +
Preference number: 2 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMSGGFS*PCSSPT
Trigger: GGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGA...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR CAA 90 bp AGGGATGAAGACAGCGTCACCCAGGAACTGCACAATGGCCCAGCCTaGCACACCATACTCTTCAAAGAGTCGCTTTCGGAGGATCTGGTC +
Preference number: 2 (lower is better)
Translates to: RDEDSVTQELHNGPA*HTILFKESLSEDLV
Trigger: GACCAGATCCTCCGAAAGCGACTCTTTGAAGAGTATGGTGTGCAAGGCTGGGCCATTGTGCAGTTCCTGGGTGACGCTGTCTTCATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAAAGGGCCTCTGCTCCTaGAGAGAACCCTGCCGTTCC +
Preference number: 2 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQKGLCS*REPCRS
Trigger: GGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGACAAAAGGCCACTGGATaGGAATGTGGCACCCTCGGC +
Preference number: 2 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGQKATG*ECGTLG
Trigger: GCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTG...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGCAAAAGGCCACTGGATaGGAATGTGGCACCCTCGGC +
Preference number: 2 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMQKATG*ECGTLG
Trigger: GCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTG...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGTTCCCAAAAGGCCACTaGATGGGAATGTGGCACCCT +
Preference number: 2 (lower is better)
Translates to: GLKPGECAGEPSNVQATWFPKGH*MGMWHP
Trigger: AGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAA...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTGGATTCTCTTGGCCTTaGTCTTCTCCAACCTTCCGG +
Preference number: 2 (lower is better)
Translates to: RHCQALTRHSKSSPYVASGFSWP*SSPTFR
Trigger: CCGGAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCC...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCATTCCCAAAAGGCCACTaGATGGGAATGTGGCACCCT +
Preference number: 2 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAFPKGH*MGMWHP
Trigger: AGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAA...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCGTCAGAGGTCACGTGTaGAGACACTGCCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: QALTRHSKSSPYVASYDFVRGHV*RHCQAL
Trigger: GAGAGCCTGGCAGTGTCTCCACACGTGACCTCTGAC...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTCAAACCAGGAGAATGTaGAGGAGAGCCCAGCAATGT +
Preference number: 2 (lower is better)
Translates to: RHCQALTRHSKSSPYVASQTRRM*RRAQQC
Trigger: ACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTG...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGCTTTGGCTGATTTTGTaGTATAAGGGGCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQLWLIL*YKGQLI
Trigger: AATCAGCTGCCCCTTATAGCACAAAATCAGCCAAAG...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGAAACAGTGCTTCACGTaGTCTGGAGATACAAAATCT +
Preference number: 2 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMKQCFT*SGDTKS
Trigger: AGATTTTGTATCTCCAGAGCACGTGAAGCACTGTTT...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCGTCAGGCGGAAACAGTaGTTCACGTGCTCTGGAGAT +
Preference number: 2 (lower is better)
Translates to: QALTRHSKSSPYVASYDFVRRKQ*FTCSGD
Trigger: ATCTCCAGAGCACGTGAAGCACTGTTTCCGCCTGAC...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGGTGTGCCCACATTCCTaGTTTCCATGGTCTCAAACC +
Preference number: 2 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMVCPHS*FPWSQT
Trigger: GGTTTGAGACCATGGAAACCAGGAATGTGGGCACAC...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGACATGAATCCTCTGCTTaGTCACCTCATCAGCATCTC +
Preference number: 2 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGHESSA*SPHQHL
Trigger: GAGATGCTGATGAGGTGACCAAGCAGAGGATTCATG...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCACTGTGTGTCAACAGTaGGACTTGCTTGTGTCACCC +
Preference number: 2 (lower is better)
Translates to: QALTRHSKSSPYVASYDFTVCQQ*DLLVSP
Trigger: GGGTGACACAAGCAAGTCGCACTGTTGACACACAGT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR TCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGTCACTGCGTGGTATATaGTGTTCTTCACCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMSLRGI*CSSPVA
Trigger: AGCTACAGGTGAAGAACATCATATACCACGCAGTGA...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACTTGGGGAAGGGCCTCTaGTCCTGCAGAGAACCCTGC +
Preference number: 2 (lower is better)
Translates to: FIERKTNCNVPFLIVQENLGKGL*SCREPC
Trigger: GCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCCCAA...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAACTCTCGGATCTTCTCTaGATCCTTCGCTGCATAAAT +
Preference number: 2 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQLSDLL*ILRCIN
Trigger: ATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAG...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR CCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACGTCAGAGGTCACGTGTaGAGACACTGCCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: FIERKTNCNVPFLIVQENVRGHV*RHCQAL
Trigger: GAGAGCCTGGCAGTGTCTCCACACGTGACCTCTGAC...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAGATACAAAATCTTCTaGGACCTTTATGCAACTGTA +
Preference number: 2 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSRYKIF*DLYATV
Trigger: TACAGTTGCATAAAGGTCGCAGAAGATTTTGTATCT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR GCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAACAAACCAGGAGAATGTaGAGGAGAGCCCAGCAATGT +
Preference number: 2 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKQTRRM*RRAQQC
Trigger: ACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTG...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CAA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGACTGACCACACTGGCTaGGGGAAGGGCCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVTDHTG*GKGLCS
Trigger: GGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAGT...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp GCCTCCTGGGAAAAGCAGTGGGCTCTCCCTGGGTCCTaGAGACTCCGGTGTTCATGGAGAGTACGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: ASWEKQWALPGS*RLRCSWRVREG
Trigger: CCCTTCCCGTACTCTCCATGAACACCGGAGTCTTCAGGACCCAGGGAGAGCCCACTGCTTTTCCCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR GCA 72 bp TGTAATACTGACCACACTGGCTTGGGGAAGGGCCTCTaGTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: CNTDHTGLGKGL*SCREPCRSLVS
Trigger: ACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAGTATTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR GCA 72 bp GACAGGAGAGCTGAAGTACCCCAGGTTTTAGGACCTTaGGAGCTTGGATTCGTGGGCCTTGAGAGTGCCGAC +
Preference number: 3 (lower is better)
Translates to: DRRAEVPQVLGP*ELGFVGLESAD
Trigger: GTCGGCACTCTCAAGGCCCACGAATCCAAGCTCGCAAGGTCCTAAAACCTGGGGTACTTCAGCTCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAACTGACCACACTGGCTaGGGGAAGGGCCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQTDHTG*GKGLCS
Trigger: GGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAGT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp CCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTaGGTCTGTATCAGAACTCTCCCTTCCTGGGGCGGC +
Preference number: 3 (lower is better)
Translates to: PNKQEWSRENTS*VCIRTLPSWGG
Trigger: GCCGCCCCAGGAAGGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
3UTR-3UTR CAA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGTGTCACCCTTCAGTGTaGAGGCAGCACAGAAAGAGC +
Preference number: 3 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWCHPSV*RQHRKS
Trigger: GCTCTTTCTGTGCTGCCTCAACACTGAAGGGTGACA...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CAA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGACGCTTTGGCTGATTTaGTGCTATAAGGGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQTLWLI*CYKGQL
Trigger: CAGCTGCCCCTTATAGCACAAAATCAGCCAAAGCGT...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp GGTTTTAGGACCTTGCGAGCTTGGATTCGTGGGCCTTaGGAGTGCCGACAGCGTCTTTCACTGCGTGGTATA +
Preference number: 3 (lower is better)
Translates to: GFRTLRAWIRGP*ECRQRLSLRGI
Trigger: TATACCACGCAGTGAAAGACGCTGTCGGCACTCTCAAGGCCCACGAATCCAAGCTCGCAAGGTCCTAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR GCA 72 bp CACCCTCGGCTTGAGTCTGACACTGTGTGTCAACAGTaGGACTTGCTTGTGTCACCCTTCAGTGTTGAGGCA +
Preference number: 3 (lower is better)
Translates to: HPRLESDTVCQQ*DLLVSPFSVEA
Trigger: TGCCTCAACACTGAAGGGTGACACAAGCAAGTCGCACTGTTGACACACAGTGTCAGACTCAAGCCGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 72 bp CAACCTGGATTCCCAAAAGGCCACTGGATGGGAATGTaGCACCCTCGGCTTGAGTCTGACACTGTGTGTCAA +
Preference number: 3 (lower is better)
Translates to: QPGFPKGHWMGM*HPRLESDTVCQ
Trigger: TTGACACACAGTGTCAGACTCAAGCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAATCCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 72 bp TGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGATaGGAATGTGGCACCCTCGGCTTGAGTCTGACACTG +
Preference number: 3 (lower is better)
Translates to: CSSNLDSQKATG*ECGTLGLSLTL
Trigger: CAGTGTCAGACTCAAGCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 72 bp GCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTaGATGGGAATGTGGCACCCTCGGCTTGAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: AMFKQPGFPKGH*MGMWHPRLESD
Trigger: GTCAGACTCAAGCCGAGGGTGCCACATTCCCATCCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CCA 72 bp CAGGAAAGGAAGGTGTGCCCACATTCCTGGTTTCCATaGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: QERKVCPHSWFP*SQTRRMCRRAQ
Trigger: CTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp CAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATaGTGCAGTTCTTTCTCAGATGACTGCTCCCTCAAG +
Preference number: 3 (lower is better)
Translates to: QFTCREHSEAQT*CSSFSDDCSLK
Trigger: CTTGAGGGAGCAGTCATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR-3UTR CAA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAACAGTGCGACTTGCTaGTGTCACCCTTCAGTGTTG +
Preference number: 3 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDNSATC*CHPSVL
Trigger: CAACACTGAAGGGTGACACAAGCAAGTCGCACTGTT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp TCAACAGTGCGACTTGCTTGTGTCACCCTTCAGTGTTaGGGCAGCACAGAAAGAGCGGCTGGAGTTTGTAAT +
Preference number: 3 (lower is better)
Translates to: STVRLACVTLQC*GSTERAAGVCN
Trigger: ATTACAAACTCCAGCCGCTCTTTCTGTGCTGCCTCAACACTGAAGGGTGACACAAGCAAGTCGCACTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp TCTCCCTCATCAATAGTTTTGAGTACTTCTTCATCGTaGGCACCCTCCCCGACAGGGATCCCAACATACACC +
Preference number: 3 (lower is better)
Translates to: SPSSIVLSTSSS*APSPTGIPTYT
Trigger: GGTGTATGTTGGGATCCCTGTCGGGGAGGGTGCTCACGATGAAGAAGTACTCAAAACTATTGATGAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR GCA 72 bp CATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTaGAGGAGAGCCCAGCAATGTTCAAGCAACCTGGAT +
Preference number: 3 (lower is better)
Translates to: HSWFPWSQTRRM*RRAQQCSSNLD
Trigger: ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp TATCCTCATGATTGGTGTGAGTGTTGGAGAGATGCCTaGATTCCTGAGTCAGGCGGAAACAGTGCTTCACGT +
Preference number: 3 (lower is better)
Translates to: YPHDWCECWRDA*IPESGGNSASR
Trigger: ACGTGAAGCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCTCTCCAACACTCACACCAATCATGAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR TCA 72 bp ATAGCCATGCCAAGTGATTGGAAGTGGGGCTACCCATaGGGAAAACGTTCAGAGAAGGAAGTGACAGTGCAA +
Preference number: 3 (lower is better)
Translates to: IAMPSDWKWGYP*GKRSEKEVTVQ
Trigger: TTGCACTGTCACTTCCTTCTCTGAACGTTTTCCTCATGGGTAGCCCCACTTCCAATCACTTGGCATGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
3UTR-3UTR CAA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACTTTGGTCATGAATaGGGTCATGATCTGGAGGAT +
Preference number: 3 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSNFGHE*GHDLED
Trigger: ATCCTCCAGATCATGACCCAATTCATGACCAAAGTT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
3UTR GCA 72 bp ACGTTCAGAGAAGGAAGTGACAGTGCAACTATGGCTTaGACAACCTTTGTTCTGGCGTTCACTATCCTCAAC +
Preference number: 3 (lower is better)
Translates to: TFREGSDSATMA*TTFVLAFTILN
Trigger: GTTGAGGATAGTGAACGCCAGAACAAAGGTTGTGCAAGCCATAGTTGCACTGTCACTTCCTTCTCTGAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
3UTR CCA 72 bp GGAAAACGTTCAGAGAAGGAAGTGACAGTGCAACTATaGCTTGCACAACCTTTGTTCTGGCGTTCACTATCC +
Preference number: 3 (lower is better)
Translates to: GKRSEKEVTVQL*LAQPLFWRSLS
Trigger: GGATAGTGAACGCCAGAACAAAGGTTGTGCAAGCCATAGTTGCACTGTCACTTCCTTCTCTGAACGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
3UTR-3UTR CAA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACTGTCACCCTTCAGTGTaGAGGCAGCACAGAAAGAGC +
Preference number: 3 (lower is better)
Translates to: FIERKTNCNVPFLIVQENCHPSV*RQHRKS
Trigger: GCTCTTTCTGTGCTGCCTCAACACTGAAGGGTGACA...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR TCA 72 bp TCCATTAACTCTGCCTCCAAGACTCCAACTACAACGTaGACTAAACAGACAGCTGAAAAAGAAGATCCCCAC +
Preference number: 3 (lower is better)
Translates to: SINSASKTPTTT*TKQTAEKEDPH
Trigger: GTGGGGATCTTCTTTTTCAGCTGTCTGTTTAGTTCACGTTGTAGTTGGAGTCTTGGAGGCAGAGTTAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
3UTR-3UTR CAA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACATCTGGAGGATTCTCTaGGCCTTGCTCTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: FIERKTNCNVPFLIVQENIWRIL*ALLFSN
Trigger: GTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGAT...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGTCATGGCCCGCACCGTaGCGGCCCTCCAGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVSWPAP*RPSRPE
Trigger: CTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGA...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGAAGCAACAGCCGCTTaGCCACCGGGGAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVEATAA*PPGRPP
Trigger: CGGCGGCCTCCCCGGTGGGCAAGCGGCTGTTGCTTC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGCCGGGGCCGGCCCTTTaGGGCCTGCTTCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVPGPAL*GLLPFA
Trigger: GGCAAAGGGAAGCAGGCCCCAAAGGGCCGGCCCCGG...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGGGCCGAGGCCGAAGCTaGGGCCGTAGGGTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQGRGRS*GRRVRE
Trigger: TTCGCGGACCCTACGGCCTCAGCTTCGGCCTCGGCC...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGTGGCCACTGGGCAACTaGGACTCGGGTGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVWPLGN*DSGALQ
Trigger: CTGCAGGGCACCCGAGTCCCAGTTGCCCAGTGGCCA...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGCCCTCCAGGCCCGAGTaGGCAGCGCAGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRPSRPE*AAQAQD
Trigger: ATCCTGGGCCTGCGCTGCGCACTCGGGCCTGGAGGG...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGCGTCACCCAGGAACTaGACAATGGCCCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVASPRN*TMAQPC
Trigger: GCAAGGCTGGGCCATTGTGCAGTTCCTGGGTGACGC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGAGCGGATTGTCCTGCTaGCCAGGCCCCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERSGLSC*PGPTVG
Trigger: GCCAACTGTGGGGCCTGGCCAGCAGGACAATCCGCT...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGAGCGGATTGTCCTGCTaGCCAGGCCCCACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMSGLSC*PGPTVG
Trigger: GCCAACTGTGGGGCCTGGCCAGCAGGACAATCCGCT...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCACCGGGGCCGGCCCTTTaGGGCCTGCTTCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPPGPAL*GLLPFA
Trigger: GGCAAAGGGAAGCAGGCCCCAAAGGGCCGGCCCCGG...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCGGCCGAGGCCGAAGCTaGGGCCGTAGGGTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPGRGRS*GRRVRE
Trigger: TTCGCGGACCCTACGGCCTCAGCTTCGGCCTCGGCC...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGCCTTGGGACCTGGCTaGGTATCTGCTCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVALGPG*VSAPRT
Trigger: TGTTCTCGGAGCAGATACTCAGCCAGGTCCCAAGGC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGGGGCTCCAGCAGGGATaGAGACAGCGTCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQGLQQG*RQRHPG
Trigger: TCCTGGGTGACGCTGTCTTCATCCCTGCTGGAGCCC...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATCATGGCCCGCACCGTaGCGGCCCTCCAGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQSWPAP*RPSRPE
Trigger: CTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGAGGCCACTCTTGGCCTaGAGCTGCTCCTCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERRPLLA*SCSSES
Trigger: CGACTCAGAGGAGCAGCTGCAGGCCAAGAGTGGCCT...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGAAGATCGCTAGGTCCTaGGGCACCGCCCCGCTCATG +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQKIARS*GTAPLM
Trigger: CATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTT...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGCTGAGATCCTCACCGTaGTTGGGGTGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQLRSSP*LGWSWR
Trigger: CCGCCAGCTCCACCCCAACCACGGTGAGGATCTCAG...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGTCCGGGTCACTCTGCTaGGGGCTCAGAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERSGSLC*GLRNPS
Trigger: GGAGGGATTTCTGAGCCCCCAGCAGAGTGACCCGGA...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGGCCGAGGCCGAAGCTaGGGCCGTAGGGTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQGRGRS*GRRVRE
Trigger: TTCGCGGACCCTACGGCCTCAGCTTCGGCCTCGGCC...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGAGTGACTACAGCTGCTaGAGCCACCATGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERSDYSC*SHHALA
Trigger: AGCCAGGGCATGGTGGCTTCAGCAGCTGTAGTCACT...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR TCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGCTGGCTGTTGCCTTTaGGGTGACAGAGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVAGCCL*GDRGSR
Trigger: TCTGCTACCTCTGTCACCTCAAAGGCAACAGCCAGC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCTCCAAACTCCTGGCTaGAGGCTTCCGGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERLQTPG*RLPASR
Trigger: TCTGGAAGCCGGAAGCCTTCAGCCAGGAGTTTGGAG...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAGAAGCAACAGCCGCTTaGCCACCGGGGAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVEATAA*PPGRPP
Trigger: CGGCGGCCTCCCCGGTGGGCAAGCGGCTGTTGCTTC...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTTCATGGCCCGCACCGTaGCGGCCCTCCAGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSSWPAP*RPSRPE
Trigger: CTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGA...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGGGACTCGGGTGCCCTaGAGAAGGACGGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPGTRVP*RRTGSF
Trigger: GAAGGACCCCGTCCTTCTGCAGGGCACCCGAGTCCC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGGGTGGGCATGGACTCTaGAGGCACTTTTCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERGGHGL*RHFSVH
Trigger: GTGGACCGAAAAGTGCCTGCAGAGTCCATGCCCACC...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGGCCCTGGCTCTCCACTaGCATTACCTCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMALALH*HYLLSR
Trigger: CCTGGAAAGGAGGTAATGCCAGTGGAGAGCCAGGGC...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGTGTTGGTGGGCGAGCTaGAGCGGCCATTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWCWWAS*SGHSPL
Trigger: CAGTGGGGAATGGCCGCTCCAGCTCGCCCACCAACA...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGGCATCTCAATAGGTTaGGTGAGGCTGTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVGISIG*VRLLVG
Trigger: GCCCACCAACAGCCTCACCCAACCTATTGAGATGCC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTCCGGGTCACTCTGCTaGGGGCTCAGAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQSGSLC*GLRNPS
Trigger: GGAGGGATTTCTGAGCCCCCAGCAGAGTGACCCGGA...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGCGCCACTTTCTGGTGTaGCTCCACCATCATCATGGC +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVRHFLV*LHHHHG
Trigger: GCCATGATGATGGTGGAGCCACACCAGAAAGTGGCG...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCATCGGACTCCCAGTGCTaGGAGCGGAGCCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPSDSQC*ERSPEH
Trigger: GTGTTCTGGGCTCCGCTCTCAGCACTGGGAGTCCGA...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGTTGGACGGCTTTTCCTaGGCCGGTAACAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERLDGFS*AGNSQG
Trigger: GCCTTGACTGTTACCGGCTCAGGAAAAGCCGTCCAA...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCGAAGCAACAGCCGCTTaGCCACCGGGGAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFEATAA*PPGRPP
Trigger: CGGCGGCCTCCCCGGTGGGCAAGCGGCTGTTGCTTC...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCCCTCCAGGCCCGAGTaGGCAGCGCAGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSPSRPE*AAQAQD
Trigger: ATCCTGGGCCTGCGCTGCGCACTCGGGCCTGGAGGG...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCACCAGGGCCCTCGGCTTaGCTCACCTCCATCACTCCC +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAPGPSA*LTSITP
Trigger: GGGAGTGATGGAGGTGAGGCAAGCCGAGGGCCCTGG...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCCCAGGGCCCTCGGCTTaGCTCACCTCCATCACTCCC +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPPGPSA*LTSITP
Trigger: GGGAGTGATGGAGGTGAGGCAAGCCGAGGGCCCTGG...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGTTCTCTCCTGAGGCCTaGGACCAGCTGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMFSPEA*DQLPFC
Trigger: ACAGAAAGGCAGCTGGTCGCAGGCCTCAGGAGAGAA...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGCGGCCATTCCCCACTaGAGAGAGACTCGGACTCCC +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWAAIPH*RETRTP
Trigger: GGGAGTCCGAGTCTCTCTGCAGTGGGGAATGGCCGC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCTGGCCACTGGGCAACTaGGACTCGGGTGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPWPLGN*DSGALQ
Trigger: CTGCAGGGCACCCGAGTCCCAGTTGCCCAGTGGCCA...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGCTGACAGGTCACTGTTaGTGCTGGAGTCCGAATCCT +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVLTGHC*CWSPNP
Trigger: AGGATTCGGACTCCAGCACCAACAGTGACCTGTCAG...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGCACTACGCTCCCCGTTaGGGCCTAGCTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRHYAPR*GLASPS
Trigger: TGATGGGGAAGCTAGGCCCCAACGGGGAGCGTAGTG...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGGGATCCACAGGTTCATaGCATCCGGGTCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERGSTGS*HPGHSA
Trigger: AGCAGAGTGACCCGGATGCCATGAACCTGTGGATCC...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CAA 72 bp AGAGCGGCTGGAGTTTGTAATACTGACCACACTGGCTaGGGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGC +
Preference number: 4 (lower is better)
Translates to: RAAGVCNTDHTG*GKGLCSCREPC
Trigger: GCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCCCAAGCCAGTGTGGTCAGTATTACAAACTCCAGCCGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGGGAGCCCAAACAAGTaGGCCTTCCAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWGSPNK*AFQQKR
Trigger: GCGCTTCTGCTGGAAGGCTCACTTGTTTGGGCTCCC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAGCAACTCACCTCTCCTaGGGCCTGCGACCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVATHLS*GLRPAA
Trigger: GGCAGCTGGTCGCAGGCCTCAGGAGAGGTGAGTTGC...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGACCTTAACCCAGGAGTaGTGCTTCCAGTTACAGCCG +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERTLTQE*CFQLQP
Trigger: CGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAGGT...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATGGGACTCGGGTGCCCTaGAGAAGGACGGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDGTRVP*RRTGSF
Trigger: GAAGGACCCCGTCCTTCTGCAGGGCACCCGAGTCCC...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAAGGAGCGGATTGTCCTaGTGGCCAGGCCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPRSGLS*WPGPTV
Trigger: AACTGTGGGGCCTGGCCAGCAGGACAATCCGCTCCT...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CCTTCCGGAGCAGCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCGGGCGGAGAGAAAGCTaGCTGAGTGCCTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PSGAALGSSLHPSLHKCAGRRES*LSACQR
Trigger: TCTTTGGCAGGCACTCAGGCAGCTTTCTCTCCGCCC...GGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGCTGCTCCGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGGGGCTCCTCAGATCTaGCGTCAGTGCCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPGAPQI*RQCQHL
Trigger: AAGGTGCTGGCACTGACGGCAGATCTGAGGAGCCCC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCACAGAGCTGCCGGCCTTaGGACCTGGCTGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPQSCRP*DLAEYL
Trigger: CAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTG...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGACTCCGTGGGAAGGCTaGAGTAAGGGTGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRTPWEG*SKGGHG
Trigger: TCCATGCCCACCCTTACTCCAGCCTTCCCACGGAGT...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCTGACAGGTCACTGTTaGTGCTGGAGTCCGAATCCT +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERLTGHC*CWSPNP
Trigger: AGGATTCGGACTCCAGCACCAACAGTGACCTGTCAG...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTGGTCTCCAAACTCCTaGCTGAAGGCTTCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQWSPNS*LKASGF
Trigger: GAAGCCGGAAGCCTTCAGCCAGGAGTTTGGAGACCA...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCGGGAGCCCAAACAAGTaGGCCTTCCAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPGSPNK*AFQQKR
Trigger: GCGCTTCTGCTGGAAGGCTCACTTGTTTGGGCTCCC...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGAGATCGGAGTCCTTCTaGGACTCTGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQRSESF*DSDAEL
Trigger: CAGCTCTGCATCAGAGTCTCAGAAGGACTCCGATCT...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGCCTTTACACAGGCCTaGAGTCAGGCTCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPAFTQA*SQALEA
Trigger: AGCCTCGAGAGCCTGACTTCAGGCCTGTGTAAAGGC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGCCTTTACACAGGCCTaGAGTCAGGCTCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWAFTQA*SQALEA
Trigger: AGCCTCGAGAGCCTGACTTCAGGCCTGTGTAAAGGC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGCCTTGGGACCTGGCTaGGTATCTGCTCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPALGPG*VSAPRT
Trigger: TGTTCTCGGAGCAGATACTCAGCCAGGTCCCAAGGC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCTCGGACTCCCAGTGCTaGGAGCGGAGCCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSSDSQC*ERSPEH
Trigger: GTGTTCTGGGCTCCGCTCTCAGCACTGGGAGTCCGA...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGAGCCCAAAGGGTGAATaGGACTCCTTATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMSPKGE*DSLLST
Trigger: GGTGCTCAATAAGGAGTCTCATTCACCCTTTGGGCT...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGCTTGTTTTCTACCACTaGGGCGATGATGTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMLVFYH*GDDVVE
Trigger: CTCGACCACATCATCGCCTCAGTGGTAGAAAACAAG...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCACTCCAAACTCCTGGCTaGAGGCTTCCGGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPLQTPG*RLPASR
Trigger: TCTGGAAGCCGGAAGCCTTCAGCCAGGAGTTTGGAG...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTGGGACTCGGGTGCCCTaGAGAAGGACGGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSGTRVP*RRTGSF
Trigger: GAAGGACCCCGTCCTTCTGCAGGGCACCCGAGTCCC...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCTCCGAGAACAGATCTaGCTTTACACAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERLREQI*LYTGLK
Trigger: CTTCAGGCCTGTGTAAAGGCAGATCTGTTCTCGGAG...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGGTGGGCATGGACTCTaGAGGCACTTTTCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWGGHGL*RHFSVH
Trigger: GTGGACCGAAAAGTGCCTGCAGAGTCCATGCCCACC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGAGTCCGAATCCTGTCTaGAAGCCAAGCTTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERSPNPV*KPSFAH
Trigger: ATGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACT...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCACTCTTGGCCTGCAGCTaGTCCTCTGAGTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPLLACS*SSESLR
Trigger: TCTGAGCGACTCAGAGGAGCAGCTGCAGGCCAAGAG...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGCTTCCCTTTGCCCTTaGCCAGTAGCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWASLCP*PVAAQH
Trigger: GTGCTGAGCTGCTACTGGGCAAGGGCAAAGGGAAGC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTATGCAGGAGCCGTCCTaGAGGAAGGGCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASMQEPS*RKGSPD
Trigger: GTCTGGAGAGCCCTTCCTGCAGGACGGCTCCTGCAT...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGGGCTCCTCAGATCTaGCGTCAGTGCCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAGAPQI*RQCQHL
Trigger: AAGGTGCTGGCACTGACGGCAGATCTGAGGAGCCCC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGCGACCGCAGGGACCCTaGATCTTTCGTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMRPQGP*IFRFFF
Trigger: AAAGAAGAAACGAAAGATGCAGGGTCCCTGCGGTCG...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAAGATCGCTAGGTCCTaGGGCACCGCCCCGCTCATG +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSKIARS*GTAPLM
Trigger: CATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGAACAAATGTAGACGGTaGCTGCTTGGCTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERNKCRR*LLGSLL
Trigger: GAGCAGAGAGCCAAGCAGCCACCGTCTACATTTGTT...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTACTGAGATCCTCACCGTaGTTGGGGTGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVLRSSP*LGWSWR
Trigger: CCGCCAGCTCCACCCCAACCACGGTGAGGATCTCAG...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATGTTGGTGGGCGAGCTaGAGCGGCCATTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQCWWAS*SGHSPL
Trigger: CAGTGGGGAATGGCCGCTCCAGCTCGCCCACCAACA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTCCTTCAGGCCACTCTTaGCCTGCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASPSGHS*PAAAPL
Trigger: CAGAGGAGCAGCTGCAGGCCAAGAGTGGCCTGAAGG...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTCACTACGCTCCCCGTTaGGGCCTAGCTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASHYAPR*GLASPS
Trigger: TGATGGGGAAGCTAGGCCCCAACGGGGAGCGTAGTG...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
3UTR CAA 72 bp GACAGCGTCACCCAGGAACTGCACAATGGCCCAGCCTaGCACACCATACTCTTCAAAGAGTCGCTTTCGGAG +
Preference number: 4 (lower is better)
Translates to: DSVTQELHNGPA*HTILFKESLSE
Trigger: CTCCGAAAGCGACTCTTTGAAGAGTATGGTGTGCAAGGCTGGGCCATTGTGCAGTTCCTGGGTGACGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CCTTCCGGAGCAGCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCTCAGCATCACGTGGGTaGGTCTGGGATCTACTGACT +
Preference number: 4 (lower is better)
Translates to: PSGAALGSSLHPSLHKCASASRG*VWDLLT
Trigger: AGTCAGTAGATCCCAGACTCACCCACGTGATGCTGA...GGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGCTGCTCCGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCAGTGACTACAGCTGCTaGAGCCACCATGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPSDYSC*SHHALA
Trigger: AGCCAGGGCATGGTGGCTTCAGCAGCTGTAGTCACT...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGAGAGGAAGAGCTACCTaGTGCCTGAGACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQRGRAT*CLRHKA
Trigger: AGCTTTGTGTCTCAGGCATCAGGTAGCTCTTCCTCT...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCATTGGACGGCTTTTCCTaGGCCGGTAACAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPLDGFS*AGNSQG
Trigger: GCCTTGACTGTTACCGGCTCAGGAAAAGCCGTCCAA...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGAGCCCAAAGGGTGAATaGGACTCCTTATTGAGCACC +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQSPKGE*DSLLST
Trigger: GGTGCTCAATAAGGAGTCTCATTCACCCTTTGGGCT...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CATGAATTGGGTCATGATCTGGAGGATTCTCTTGGCCTTGCTCTTCTCCAACCTGCGGCCATTCCCCACTaGAGAGAGACTCGGACTCCC +
Preference number: 4 (lower is better)
Translates to: HELGHDLEDSLGLALLQPAAIPH*RETRTP
Trigger: GGGAGTCCGAGTCTCTCTGCAGTGGGGAATGGCCGC...AGGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGATCATGACCCAATTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGGGCGGAGAGAAAGCTaGCTGAGTGCCTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGGRRES*LSACQR
Trigger: TCTTTGGCAGGCACTCAGGCAGCTTTCTCTCCGCCC...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CCTTCCGGAGCAGCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCACAGGTCACTGTTGGTaGTGGAGTCCGAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSGAALGSSLHPSLHKCATGHCW*WSPNPV
Trigger: GACAGGATTCGGACTCCAGCACCAACAGTGACCTGT...GGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGCTGCTCCGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAGGCCACTCTTGGCCTaGAGCTGCTCCTCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDRPLLA*SCSSES
Trigger: CGACTCAGAGGAGCAGCTGCAGGCCAAGAGTGGCCT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAGGGCTCTCCAGACTaGTTCAGCTTCCTTACTTTA +
Preference number: 4 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVKGSPD*FSFLTL
Trigger: TAAAGTAAGGAAGCTGAAGCAGTCTGGAGAGCCCTT...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTAAGATCGCTAGGTCCTaGGGCACCGCCCCGCTCATG +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSKIARS*GTAPLM
Trigger: CATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTT...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTCTGTGCAAACTCTGCTaGGGCGGAGAGAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASLCKLC*GGEKAA
Trigger: GGCAGCTTTCTCTCCGCCCCAGCAGAGTTTGCACAG...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGGTCACTGTTGGTGCTaGAGTCCGAATCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPGHCWC*SPNPVC
Trigger: GCAGACAGGATTCGGACTCCAGCACCAACAGTGACC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGCCTTCAGGCCACTCTTaGCCTGCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMPSGHS*PAAAPL
Trigger: CAGAGGAGCAGCTGCAGGCCAAGAGTGGCCTGAAGG...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCACCCCATCAGGTGCTCTaGAATCCCCTTCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAPHQVL*NPLQAT
Trigger: AGTGGCCTGAAGGGGATTCCAGAGCACCTGATGGGG...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCATCCTTCAGCACCGACTaGCCAACTTTCAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPSFSTD*PTFRGA
Trigger: TGCTCCCCTGAAAGTTGGCCAGTCGGTGCTGAAGGA...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGGGCATGAGGTTTTCTaGTTCGTGGGACTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWGHEVF*FVGLPL
Trigger: AAGGGGCAGTCCCACGAACCAGAAAACCTCATGCCC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGCAGTGCCAGCACCTTTaGGAACTTGGTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWQCQHL*ELGLAL
Trigger: CAGAGCCAGACCAAGTTCCCAAAGGTGCTGGCACTG...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGATTGTTGCTGGGGTCATaGAGACACAGAAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGLLLGS*RHRRRP
Trigger: CGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAA...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGCGCTTTCGGAGGATCTaGTCCAGATACCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQRFRRI*SRYQLW
Trigger: CCAAAGTTGGTATCTGGACCAGATCCTCCGAAAGCG...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
3UTR CAA 72 bp CGGCTTGAGTCTGACACTGTGTGTCAACAGTGCGACTaGCTTGTGTCACCCTTCAGTGTTGAGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RLESDTVCQQCD*LVSPFSVEAAQ
Trigger: CTGTGCTGCCTCAACACTGAAGGGTGACACAAGCAAGTCGCACTGTTGACACACAGTGTCAGACTCAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTACTGAAGCATACGGAGTaGAAGGGACGGGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVLKHTE*KGRAYP
Trigger: GGGATACGCCCGTCCCTTTCACTCCGTATGCTTCAG...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGCTGGCTGTTGCCTTTaGGGTGACAGAGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGAGCCL*GDRGSR
Trigger: TCTGCTACCTCTGTCACCTCAAAGGCAACAGCCAGC...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAACCAACCTCCGGAAGTaGAAGAAGCGGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGTNLRK*KKRQAT
Trigger: TGTAGCCTGCCGCTTCTTTCACTTCCGGAGGTTGGT...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTCAGACATTACAAGCTaGCAGAACTGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQSDITS*QNWSPT
Trigger: TGTTGGGGACCAGTTCTGTCAGCTTGTAATGTCTGA...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATCCGGGCACGGGGGCCTaGTGGCTTTTAGTTCACTAT +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDPGTGA*WLLVHY
Trigger: ATAGTGAACTAAAAGCCATCAGGCCCCCGTGCCCGG...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATCTACCACTGAGGCGATaGTGTGGTCGAGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDLPLRR*CGRGSR
Trigger: CCGACTTCCTCGACCACATCATCGCCTCAGTGGTAG...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGTCACTGCGTGGTATATaGTGTTCTTCACCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERSLRGI*CSSPVA
Trigger: AGCTACAGGTGAAGAACATCATATACCACGCAGTGA...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCAATGTAGACGGTGGCTaGTTGGCTCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPNVDGG*LALCSS
Trigger: GCTGGAGCAGAGAGCCAAGCAGCCACCGTCTACATT...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp CCTTCCGGAGCAGCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCCTCCGAGAACAGATCTaGCTTTACACAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSGAALGSSLHPSLHKCALREQI*LYTGLK
Trigger: CTTCAGGCCTGTGTAAAGGCAGATCTGTTCTCGGAG...GGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGCTGCTCCGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGCATGATTCTCTGGGGTaGGGGTATTTAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWHDSLG*GYLGDS
Trigger: GGAGTCTCCTAAATACCCGCACCCCAGAGAATCATG...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTAGGAGCGGATTGTCCTaGTGGCCAGGCCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECRSGLS*WPGPTV
Trigger: AACTGTGGGGCCTGGCCAGCAGGACAATCCGCTCCT...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGTGCTTTGTTCTCCTGTaGAAACTCTGCTGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWCFVLL*KLCWGG
Trigger: TCCGCCCCAGCAGAGTTTGCACAGGAGAACAAAGCA...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAAGCTTCCCCATCAGGTaGTCTGGAATCCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGSFPIR*SGIPFR
Trigger: CCTGAAGGGGATTCCAGAGCACCTGATGGGGAAGCT...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCATGCAGGAGCCGTCCTaGAGGAAGGGCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFMQEPS*RKGSPD
Trigger: GTCTGGAGAGCCCTTCCTGCAGGACGGCTCCTGCAT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGTGGGACTGCCCCTTTaGACACTTCAGCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAVGLPL*TLQPGE
Trigger: TTCTCCTGGCTGAAGTGTGCAAAGGGGCAGTCCCAC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGTGGGACTGCCCCTTTaGACACTTCAGCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGVGLPL*TLQPGE
Trigger: TTCTCCTGGCTGAAGTGTGCAAAGGGGCAGTCCCAC...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAAAGTCGGCCAACCAATaGAGAGCAGAGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGKSANQ*RAEEGG
Trigger: CCCTCCTTCCTCTGCTCTGCATTGGTTGGCCGACTT...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGCTCTCGGATCTTCTCTaGATCCTTCGCTGCATAAAT +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMLSDLL*ILRCIN
Trigger: ATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAG...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGGATTCTCTTGGCCTTaGTCTTCTCCAACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPGFSWP*SSPTFR
Trigger: CCGGAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCCCCAGATCTGCAGTCTaGCCTGAAGCAACTCACCTC +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPPRSAV*PEATHL
Trigger: GAGGTGAGTTGCTTCAGGGCAGACTGCAGATCTGGG...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGTCCATCAGCATCACGTaGGTGAGTCTGGGATCTACT +
Preference number: 4 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWSISIT*VSLGST
Trigger: AGTAGATCCCAGACTCACCCACGTGATGCTGATGGA...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAAGCTCCACCTACCTCTaGGGCCAAAGGTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVSSTYL*GQRCLT
Trigger: GGTCAGACACCTTTGGCCCCAGAGGTAGGTGGAGCT...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp CATGAATTGGGTCATGATCTGGAGGATTCTCTTGGCCTTGCTCTTCTCCAACCTCAGAGCTGCCGGCCTTaGGACCTGGCTGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: HELGHDLEDSLGLALLQPQSCRP*DLAEYL
Trigger: CAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTG...AGGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGATCATGACCCAATTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCCTGTGCAAACTCTGCTaGGGCGGAGAGAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSLCKLC*GGEKAA
Trigger: GGCAGCTTTCTCTCCGCCCCAGCAGAGTTTGCACAG...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGATCCTTCAGCACCGACTaGCCAACTTTCAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGSFSTD*PTFRGA
Trigger: TGCTCCCCTGAAAGTTGGCCAGTCGGTGCTGAAGGA...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCATGCTGTTGGAGGCAGTaGGACCCAGTAACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECACCWRQ*DPVTGC
Trigger: ACAGCCTGTTACTGGGTCCCACTGCCTCCAACAGCA...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCATGGTCTCCAAACTCCTaGCTGAAGGCTTCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAWSPNS*LKASGF
Trigger: GAAGCCGGAAGCCTTCAGCCAGGAGTTTGGAGACCA...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGAGTCTGGGATCTACTaGCTTGACCTCACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAESGIY*LDLTSL
Trigger: GAGACTGGTGAGGTCAAGTCAGTAGATCCCAGACTC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCGAGTCTGGGATCTACTaGCTTGACCTCACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPESGIY*LDLTSL
Trigger: GAGACTGGTGAGGTCAAGTCAGTAGATCCCAGACTC...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTCTGAAGCATACGGAGTaGAAGGGACGGGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECLKHTE*KGRAYP
Trigger: GGGATACGCCCGTCCCTTTCACTCCGTATGCTTCAG...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR TCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTTGCAAGGCCAGTGTCTaGGATCCTCACCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSCKASV*DPHRGW
Trigger: CCAACCACGGTGAGGATCTCAGACACTGGCCTTGCA...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCTCGAGGCTTTGTGTaGAGGAATCCCTGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDSRGFV*RNPCSR
Trigger: CCTCGAGCAGGGATTCCTTCACACAAAGCCTCGAGA...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAAGAGGAAGAGCTACCTaGTGCCTGAGACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPRGRAT*CLRHKA
Trigger: AGCTTTGTGTCTCAGGCATCAGGTAGCTCTTCCTCT...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAACCAACCTCCGGAAGTaGAAGAAGCGGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQTNLRK*KKRQAT
Trigger: TGTAGCCTGCCGCTTCTTTCACTTCCGGAGGTTGGT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGAGACCCAGTGGATATTaGAGAGGGTTGTCTCACACA +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRRPSGY*RGLSHT
Trigger: TGTGTGAGACAACCCTCTTCAATATCCACTGGGTCT...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAGCTCCGCCTCCGCTTaGGAAGGTAGTTTCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDSSASA*EGSFVS
Trigger: GGAAACGAAACTACCTTCTCAAGCGGAGGCGGAGCT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGAGCTCCGCCTCCGCTTaGGAAGGTAGTTTCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMSSASA*EGSFVS
Trigger: GGAAACGAAACTACCTTCTCAAGCGGAGGCGGAGCT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATTTCCGGGCCCAGAGTaGAGGAGGTCTCGAAGACTA +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQFPGPE*RRSRRL
Trigger: TAGTCTTCGAGACCTCCTTCACTCTGGGCCCGGAAA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGTTTCCGGGCCCAGAGTaGAGGAGGTCTCGAAGACTA +
Preference number: 4 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLFPGPE*RRSRRL
Trigger: TAGTCTTCGAGACCTCCTTCACTCTGGGCCCGGAAA...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAATCTGCAGTCTGCCCTaGAGCAACTCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVICSLP*SNSPLL
Trigger: CAGGAGAGGTGAGTTGCTTCAGGGCAGACTGCAGAT...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAAATGTAGACGGTGGCTaGTTGGCTCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQNVDGG*LALCSS
Trigger: GCTGGAGCAGAGAGCCAAGCAGCCACCGTCTACATT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAAGAAAGCTGCCTGAGTaGCTGCCAAAGACGGTACTG +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECARKLPE*LPKTVL
Trigger: CAGTACCGTCTTTGGCAGGCACTCAGGCAGCTTTCT...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGAGCTTCCCCATCAGGTaGTCTGGAATCCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMSFPIR*SGIPFR
Trigger: CCTGAAGGGGATTCCAGAGCACCTGATGGGGAAGCT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCGCTTCCCTTTGCCCTTaGCCAGTAGCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFASLCP*PVAAQH
Trigger: GTGCTGAGCTGCTACTGGGCAAGGGCAAAGGGAAGC...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCTCTGGTTCGTGGGACTaGCCCTTTGCACACTTCAGC +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSSGSWD*PFAHFS
Trigger: GCTGAAGTGTGCAAAGGGGCAGTCCCACGAACCAGA...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTACCTCTCCTGAGGCCTaGGACCAGCTGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSTSPEA*DQLPFC
Trigger: ACAGAAAGGCAGCTGGTCGCAGGCCTCAGGAGAGGT...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCATCCATCAGCATCACGTaGGTGAGTCTGGGATCTACT +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPSISIT*VSLGST
Trigger: AGTAGATCCCAGACTCACCCACGTGATGCTGATGGA...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTGCCCTGGCTCTCCACTaGCATTACCTCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSALALH*HYLLSR
Trigger: CCTGGAAAGGAGGTAATGCCAGTGGAGAGCCAGGGC...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGTTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERFLWCK*QSECCG
Trigger: ACCGCAACATTCGCTTTGCCACTTACACCAAAGAAA...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCAGCTCCACCTACCTCTaGGGCCAAAGGTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFSSTYL*GQRCLT
Trigger: GGTCAGACACCTTTGGCCCCAGAGGTAGGTGGAGCT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCGAAGCCACCATGCCCTaGCTAACTTGTTCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPEATMP*LTCSSV
Trigger: AACGCTGGAACAAGTTAGCCAGGGCATGGTGGCTTC...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCGGCATCTCAATAGGTTaGGTGAGGCTGTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSGISIG*VRLLVG
Trigger: GCCCACCAACAGCCTCACCCAACCTATTGAGATGCC...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTCCCCATCAGGTGCTCTaGAATCCCCTTCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECPHQVL*NPLQAT
Trigger: AGTGGCCTGAAGGGGATTCCAGAGCACCTGATGGGG...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGATTCCACGCCACTTTCTaGTGTGGCTCCACCATCATC +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGFHATF*CGSTII
Trigger: GATGATGGTGGAGCCACACCAGAAAGTGGCGTGGAA...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGCAGTGCCAGCACCTTTaGGAACTTGGTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMQCQHL*ELGLAL
Trigger: CAGAGCCAGACCAAGTTCCCAAAGGTGCTGGCACTG...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATGCTGTTGGAGGCAGTaGGACCCAGTAACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQCCWRQ*DPVTGC
Trigger: ACAGCCTGTTACTGGGTCCCACTGCCTCCAACAGCA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCACCTCAGTTTTGCTGTTaGAGGCAGTGGGACCCAGTA +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAPQFCC*RQWDPV
Trigger: TACTGGGTCCCACTGCCTCCAACAGCAAAACTGAGG...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGGCCTGCCATCTCGTTTaGTATATTCTGGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQACHLV*YILEEE
Trigger: TTCCTCTTCCAGAATATACCAAACGAGATGGCAGGC...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGTGGGATCTACTGACTTaGCCTCACCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWWDLLT*PHQSQL
Trigger: TAACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCA...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGAGTCTGGGATCTACTaGCTTGACCTCACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQESGIY*LDLTSL
Trigger: GAGACTGGTGAGGTCAAGTCAGTAGATCCCAGACTC...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCAGCATCACGTGGGTaGGTCTGGGATCTACTGACT +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDSASRG*VWDLLT
Trigger: AGTCAGTAGATCCCAGACTCACCCACGTGATGCTGA...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGCATCACGTGGGTaGGTCTGGGATCTACTGACT +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVSASRG*VWDLLT
Trigger: AGTCAGTAGATCCCAGACTCACCCACGTGATGCTGA...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGAGACACAAAGCTGCTaGAAGGGCTGTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAETQSC*KGCVPL
Trigger: AAGTGGAACACAGCCCTTTCAGCAGCTTTGTGTCTC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGACACAAAGCTGCTaGAAGGGCTGTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGETQSC*KGCVPL
Trigger: AAGTGGAACACAGCCCTTTCAGCAGCTTTGTGTCTC...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATGTTGGAGAGATGCCTaGATTCCTGAGTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQCWRDA*IPESGG
Trigger: TCCGCCTGACTCAGGAATTCAGGCATCTCTCCAACA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAACCTTAACCCAGGAGTaGTGCTTCCAGTTACAGCCG +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVTLTQE*CFQLQP
Trigger: CGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAGGT...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATACCTTAACCCAGGAGTaGTGCTTCCAGTTACAGCCG +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDTLTQE*CFQLQP
Trigger: CGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAGGT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCACATGATTCTCTGGGGTaGGGGTATTTAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAHDSLG*GYLGDS
Trigger: GGAGTCTCCTAAATACCCGCACCCCAGAGAATCATG...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGTACAGCTTCAAAAGGTaGTTTGTTCTCCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMYSFKR*FVLLCK
Trigger: TTTGCACAGGAGAACAAAGCACCTTTTGAAGCTGTA...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATACAGGTCACTGTTGGTaGTGGAGTCCGAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDTGHCW*WSPNPV
Trigger: GACAGGATTCGGACTCCAGCACCAACAGTGACCTGT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCTCTGGTTCGTGGGACTaGCCCTTTGCACACTTCAGC +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFSGSWD*PFAHFS
Trigger: GCTGAAGTGTGCAAAGGGGCAGTCCCACGAACCAGA...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATGTCAGGCGGAAACAGTaGTTCACGTGCTCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDVRRKQ*FTCSGD
Trigger: ATCTCCAGAGCACGTGAAGCACTGTTTCCGCCTGAC...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: LGSAVHVQGTLRSSDMMQFCRFL*CKWQSE
Trigger: TTCGCTTTGCCACTTACACCAAAGAAAACGGCAGAA...CTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCGAAGCCACCATGCCCTaGCTAACTTGTTCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSEATMP*LTCSSV
Trigger: AACGCTGGAACAAGTTAGCCAGGGCATGGTGGCTTC...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTGGCTAAAACTCCATTaGACTGGCTCCGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASWLKLH*TGSVHF
Trigger: GAAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCA...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGGTCACTGTTGGTGCTaGAGTCCGAATCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECGHCWC*SPNPVC
Trigger: GCAGACAGGATTCGGACTCCAGCACCAACAGTGACC...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CATGAATTGGGTCATGATCTGGAGGATTCTCTTGGCCTTGCTCTTCTCCAACCTGGATCCACAGGTTCATaGCATCCGGGTCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: HELGHDLEDSLGLALLQPGSTGS*HPGHSA
Trigger: AGCAGAGTGACCCGGATGCCATGAACCTGTGGATCC...AGGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGATCATGACCCAATTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCCGCCACTTTCTGGTGTaGCTCCACCATCATCATGGC +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFRHFLV*LHHHHG
Trigger: GCCATGATGATGGTGGAGCCACACCAGAAAGTGGCG...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTTCCACGCCACTTTCTaGTGTGGCTCCACCATCATC +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDFHATF*CGSTII
Trigger: GATGATGGTGGAGCCACACCAGAAAGTGGCGTGGAA...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGCCTCAGTTTTGCTGTTaGAGGCAGTGGGACCCAGTA +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMPQFCC*RQWDPV
Trigger: TACTGGGTCCCACTGCCTCCAACAGCAAAACTGAGG...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTCTGGAGGATTCTCTTaGCCTTGCTCTTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASSGGFS*PCSSPT
Trigger: GGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGA...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
3UTR CAA 72 bp ATGAATTGGGTCATGATCTGGAGGATTCTCTTGGCCTaGCTCTTCTCCAACCTTCCGGAGCAGCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: MNWVMIWRILLA*LFSNLPEQLSD
Trigger: ATCCGAGAGCTGCTCCGGAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGATCATGACCCAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CATGAATTGGGTCATGATCTGGAGGATTCTCTTGGCCTTGCTCTTCTCCAACCTAGATCGGAGTCCTTCTaGGACTCTGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HELGHDLEDSLGLALLQPRSESF*DSDAEL
Trigger: CAGCTCTGCATCAGAGTCTCAGAAGGACTCCGATCT...AGGTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGATCATGACCCAATTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGATCCAGAGTTCAGACTTaGGCTTTTTATGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGSRVQT*AFYAPL
Trigger: CAGGGGTGCATAAAAAGCTCAAGTCTGAACTCTGGA...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCATCCAGAGTTCAGACTTaGGCTTTTTATGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECASRVQT*AFYAPL
Trigger: CAGGGGTGCATAAAAAGCTCAAGTCTGAACTCTGGA...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATTAACCCAGGAGTGCTaGTTCCAGTTACAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVLTQEC*FQLQPS
Trigger: TGACGGCTGTAACTGGAAGCAGCACTCCTGGGTTAA...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCAGAAAGCTGCCTGAGTaGCTGCCAAAGACGGTACTG +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFRKLPE*LPKTVL
Trigger: CAGTACCGTCTTTGGCAGGCACTCAGGCAGCTTTCT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGGTCTCAAAACAGATTTaGTTTGCCGACTTATACAAG +
Preference number: 4 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERVSKQI*FADLYK
Trigger: CTTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGAC...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGTCCAGTTATTTTTGTTaGTGGGGTCATGGAGACACA +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRSSYFC*WGHGDT
Trigger: TGTGTCTCCATGACCCCAGCAACAAAAATAACTGGA...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATTGAGCACCATTGGCTaGCCATCTTCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQLSTIG*PSSDRS
Trigger: ACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGTTGAGCACCATTGGCTaGCCATCTTCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMLSTIG*PSSDRS
Trigger: ACTACGGTCAGAAGATGGGCAGCCAATGGTGCTCAA...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGACATCTGTTCCCATCTaGAACAGATGCATCCCATTA +
Preference number: 4 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWTSVPI*NRCIPL
Trigger: TAATGGGATGCATCTGTTCCAGATGGGAACAGATGT...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCCATCAGCATCACGTaGGTGAGTCTGGGATCTACT +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVSISIT*VSLGST
Trigger: AGTAGATCCCAGACTCACCCACGTGATGCTGATGGA...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAAACAAATGTAGACGGTaGCTGCTTGGCTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVNKCRR*LLGSLL
Trigger: GAGCAGAGAGCCAAGCAGCCACCGTCTACATTTGTT...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGCTCCACCATCATCATaGCCTCCTTCTCAGACATTA +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAAPPSS*PPSQTL
Trigger: TAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCATATAGGGACCTCGGCTaGAAATCTCTTGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPYRDLG*KSLVAF
Trigger: AAAAGCTACAAGAGATTTTCAGCCGAGGTCCCTATA...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAATGGGATCTACTGACTTaGCCTCACCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQWDLLT*PHQSQL
Trigger: TAACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCA...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATGGGATCTACTGACTTaGCCTCACCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVWDLLT*PHQSQL
Trigger: TAACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCA...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGAGACCCAGTGGATATTaGAGAGGGTTGTCTCACACA +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMRPSGY*RGLSHT
Trigger: TGTGTGAGACAACCCTCTTCAATATCCACTGGGTCT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGTACCACCAGAGTTCTaGCGTTTTCTTTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGVPPEF*RFLWCK
Trigger: CTTACACCAAAGAAAACGGCAGAACTCTGGTGGTAC...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGTACAGCTTCAAAAGGTaGTTTGTTCTCCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRYSFKR*FVLLCK
Trigger: TTTGCACAGGAGAACAAAGCACCTTTTGAAGCTGTA...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAAAAACTCCATTGGACTaGCTCCGTCCACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGKTPLD*LRPLPK
Trigger: TTTTGGAAGTGGACGGAGCCAGTCCAATGGAGTTTT...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGAAGGCTTGTTATCTGTaGCTAAAACTCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWKACYL*LKLHWT
Trigger: AGTCCAATGGAGTTTTAGCCACAGATAACAAGCCTT...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCGCTCCACCATCATCATaGCCTCCTTCTCAGACATTA +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSAPPSS*PPSQTL
Trigger: TAATGTCTGAGAAGGAGGCCATGATGATGGTGGAGC...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCCATGAATCCTCTGCTTaGTCACCTCATCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSHESSA*SPHQHL
Trigger: GAGATGCTGATGAGGTGACCAAGCAGAGGATTCATG...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGCTTATCCTCATGATTaGTGTGAGTGTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWAYPHD*CECWRD
Trigger: ATCTCTCCAACACTCACACCAATCATGAGGATAAGC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGCGTCTTTCACTGCGTaGTATATGATGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGASFTA*YMMFFT
Trigger: GGTGAAGAACATCATATACCACGCAGTGAAAGACGC...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
3UTR CAA 72 bp AGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTaGCCAGTTATGACTTCCTCTGCCTCCAAACACATC +
Preference number: 4 (lower is better)
Translates to: RLSPGTVSHHLM*PVMTSSASKHI
Trigger: GATGTGTTTGGAGGCAGAGGAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATAGGGACCTCGGCTaGAAATCTCTTGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RHCQALTRHSKSSPYVASYRDLG*KSLVAF
Trigger: AAAAGCTACAAGAGATTTTCAGCCGAGGTCCCTATA...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAGTACCACCAGAGTTCTaGCGTTTTCTTTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVVPPEF*RFLWCK
Trigger: CTTACACCAAAGAAAACGGCAGAACTCTGGTGGTAC...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCACAATGGCCCAGCCTTaGACACCATACTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFTMAQP*TPYSSK
Trigger: CTTTGAAGAGTATGGTGTGCAAGGCTGGGCCATTGT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGACAGCGTCTTTCACTaGGTGGTATATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECADSVFH*VVYDVL
Trigger: AAGAACATCATATACCACGCAGTGAAAGACGCTGTC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCACATCTGTTCCCATCTaGAACAGATGCATCCCATTA +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPTSVPI*NRCIPL
Trigger: TAATGGGATGCATCTGTTCCAGATGGGAACAGATGT...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCTTCTGCCGTTTTCTTTaGTGTAAGTGGCAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPFCRFL*CKWQSE
Trigger: TTCGCTTTGCCACTTACACCAAAGAAAACGGCAGAA...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAAAACTCCATTGGACTaGCTCCGTCCACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDKTPLD*LRPLPK
Trigger: TTTTGGAAGTGGACGGAGCCAGTCCAATGGAGTTTT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGACTTTGGTCATGAATTaGGTCATGATCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWTLVMN*VMIWRI
Trigger: AATCCTCCAGATCATGACCCAATTCATGACCAAAGT...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR TCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACTGCAAGGCCAGTGTCTaGGATCCTCACCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENCKASV*DPHRGW
Trigger: CCAACCACGGTGAGGATCTCAGACACTGGCCTTGCA...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR TCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCGCTTCGCTCATCCAATaGGAACCTTTTTACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFASLIQ*EPFYSF
Trigger: GAAGCTGTAAAAAGGTTCTCATTGGATGAGCGAAGC...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACCTCTTGGCCTGCAGCTaGTCCTCTGAGTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENLLACS*SSESLR
Trigger: TCTGAGCGACTCAGAGGAGCAGCTGCAGGCCAAGAG...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGTCTCAAAACAGATTTaGTTTGCCGACTTATACAAG +
Preference number: 4 (lower is better)
Translates to: GLKPGECAGEPSNVQATWVSKQI*FADLYK
Trigger: CTTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGAC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCCTGCTTGACAGGCTTTTAGTTCACTATTaGTATTTGACGCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: CREPCRSLVSVVKGLLDRLLVHY*YLTQNL
Trigger: AAGGTTCTGCGTCAAATAGCAATAGTGAACTAAAAG...CCTGTCAAGCAGGCCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAAAACAGTGCTTCACGTaGTCTGGAGATACAAAATCT +
Preference number: 4 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGKQCFT*SGDTKS
Trigger: AGATTTTGTATCTCCAGAGCACGTGAAGCACTGTTT...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAATGTTGCGGTTAATCTaGGGAACAAATGTAGACGGT +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVMLRLI*GTNVDG
Trigger: ACCGTCTACATTTGTTCCCCAGATTAACCGCAACAT...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATTTCTTTGGTGTAAGTaGCAAAGCGAATGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: HIGQTSRSGPERTQAESVFLWCK*QSECCG
Trigger: ACCGCAACATTCGCTTTGCCACTTACACCAAAGAAA...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACACTCCGTGGGAAGGCTaGAGTAAGGGTGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENTPWEG*SKGGHG
Trigger: TCCATGCCCACCCTTACTCCAGCCTTCCCACGGAGT...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCACTGGTCCCCAACATTaGCCAAGATGTATTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFTGPQH*PRCILR
Trigger: CCTCAAAATACATCTTGGCCAATGTTGGGGACCAGT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACTTGTTGCTGGGGTCATaGAGACACAGAAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENLLLGS*RHRRRP
Trigger: CGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAA...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCCTGCCATCTCGTTTaGTATATTCTGGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECACHLV*YILEEE
Trigger: TTCCTCTTCCAGAATATACCAAACGAGATGGCAGGC...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTTATAGGGACCTCGGCTaGAAATCTCTTGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSYRDLG*KSLVAF
Trigger: AAAAGCTACAAGAGATTTTCAGCCGAGGTCCCTATA...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR TCA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGCAGACTAGAATTTCTTaGATTCTCACTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLQTRIS*ILTLWC
Trigger: ACACCACAGAGTGAGAATTCAAGAAATTCTAGTCTG...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAACAGTAGAATCATCTTaGTCCTGTTCCTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: GRCAHIPGFHGLKPGECATVESS*SCSLNL
Trigger: CAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGT...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCTCCAGTTATTTTTGTTaGTGGGGTCATGGAGACACA +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFSSYFC*WGHGDT
Trigger: TGTGTCTCCATGACCCCAGCAACAAAAATAACTGGA...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGAACTCTTCTGTCTTCTaGTGTTATCAAACCATAGGC +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMNSSVF*CYQTIG
Trigger: GCCTATGGTTTGATAACAGCAGAAGACAGAAGAGTT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCACATCTGTTCCCATCTaGAACAGATGCATCCCATTA +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFTSVPI*NRCIPL
Trigger: TAATGGGATGCATCTGTTCCAGATGGGAACAGATGT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCATGTTGCGGTTAATCTaGGGAACAAATGTAGACGGT +
Preference number: 4 (lower is better)
Translates to: QALTRHSKSSPYVASYDFMLRLI*GTNVDG
Trigger: ACCGTCTACATTTGTTCCCCAGATTAACCGCAACAT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAAGGCTTGTTATCTGTaGCTAAAACTCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDKACYL*LKLHWT
Trigger: AGTCCAATGGAGTTTTAGCCACAGATAACAAGCCTT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACGGGCATGAGGTTTTCTaGTTCGTGGGACTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENGHEVF*FVGLPL
Trigger: AAGGGGCAGTCCCACGAACCAGAAAACCTCATGCCC...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGAAGCTTTGGAGTCAATaGAGAGACTTTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMKLWSQ*RDFCSR
Trigger: TCTACTGCAAAAGTCTCTCCATTGACTCCAAAGCTT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAAGCTTTGGAGTCAATaGAGAGACTTTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSKLWSQ*RDFCSR
Trigger: TCTACTGCAAAAGTCTCTCCATTGACTCCAAAGCTT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAGTTATTTTTGTTGCTaGGGTCATGGAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDSYFCC*GHGDTE
Trigger: TTCTGTGTCTCCATGACCCCAGCAACAAAAATAACT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAACCGGGCACGGGGGCCTaGTGGCTTTTAGTTCACTAT +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKPGTGA*WLLVHY
Trigger: ATAGTGAACTAAAAGCCATCAGGCCCCCGTGCCCGG...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAACTACCACTGAGGCGATaGTGTGGTCGAGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKLPLRR*CGRGSR
Trigger: CCGACTTCCTCGACCACATCATCGCCTCAGTGGTAG...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAGATGCCTGAATTCCTaGGTCAGGCGGAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENRCLNS*VRRKQC
Trigger: GCACTGTTTCCGCCTGACTCAGGAATTCAGGCATCT...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR GCA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGACAGTAGAATCATCTTaGTCCTGTTCCTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMTVESS*SCSLNL
Trigger: CAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CCA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTAGTTATTTTTGTTGCTaGGGTCATGGAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECSYFCC*GHGDTE
Trigger: TTCTGTGTCTCCATGACCCCAGCAACAAAAATAACT...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACCTTGTTTTCTACCACTaGGGCGATGATGTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENLVFYH*GDDVVE
Trigger: CTCGACCACATCATCGCCTCAGTGGTAGAAAACAAG...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACTTAACCCAGGAGTGCTaGTTCCAGTTACAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENLTQEC*FQLQPS
Trigger: TGACGGCTGTAACTGGAAGCAGCACTCCTGGGTTAA...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAAAAGTCGGCCAACCAATaGAGAGCAGAGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKKSANQ*RAEEGG
Trigger: CCCTCCTTCCTCTGCTCTGCATTGGTTGGCCGACTT...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAAGATACAAAATCTTCTaGGACCTTTATGCAACTGTA +
Preference number: 4 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQRYKIF*DLYATV
Trigger: TACAGTTGCATAAAGGTCGCAGAAGATTTTGTATCT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR TCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAAGTCCAGCCCAAAGGGTaGATGAGACTCCTTATTGAG +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKVQPKG*MRLLIE
Trigger: CTCAATAAGGAGTCTCATTCACCCTTTGGGCTGGAC...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAAGGGCTCTCCAGACTaGTTCAGCTTCCTTACTTTA +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENKGSPD*FSFLTL
Trigger: TAAAGTAAGGAAGCTGAAGCAGTCTGGAGAGCCCTT...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR TCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAATCAGACATTACAAGCTaGCAGAACTGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKSDITS*QNWSPT
Trigger: TGTTGGGGACCAGTTCTGTCAGCTTGTAATGTCTGA...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAACTCCTGGCTTCTCTTTaGCATCATGAATCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKLLASL*HHESSA
Trigger: AGCAGAGGATTCATGATGGCAAAGAGAAGCCAGGAG...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CCA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAAACTGGTCCCCAACATTaGCCAAGATGTATTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKTGPQH*PRCILR
Trigger: CCTCAAAATACATCTTGGCCAATGTTGGGGACCAGT...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR GCA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACCTTTTAGTTCACTATTaGTATTTGACGCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: FIERKTNCNVPFLIVQENLLVHY*YLTQNL
Trigger: AAGGTTCTGCGTCAAATAGCAATAGTGAACTAAAAG...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 90 bp CCGCCCCGCTCATGGCCCGCACCGTGCCGGCCCTCCAGGCCCGAGTaGGCAGCGCAGGCCCAGGATCTCCGCTCACTACCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PPRSWPAPCRPSRPE*AAQAQDLRSLPPPP
Trigger: CGGCGGCGGCGGTAGTGAGCGGAGATCCTGGGCCTGCGCTGCGCACTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGAGCGGGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS GCA 90 bp AGATCGCTAGGTCCTGGGGCACCGCCCCGCTCATGGCCCGCACCGTaGCGGCCCTCCAGGCCCGAGTGCGCAGCGCAGGCCCAGGATCTC +
Preference number: 5 (lower is better)
Translates to: RSLGPGAPPRSWPAP*RPSRPECAAQAQDL
Trigger: GAGATCCTGGGCCTGCGCTGCGCACTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CCA 90 bp CAAACTCCACAAAGATCGCTAGGTCCTGGGGCACCGCCCCGCTCATaGCCCGCACCGTGCCGGCCCTCCAGGCCCGAGTGCGCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: QTPQRSLGPGAPPRS*PAPCRPSRPECAAQ
Trigger: CTGCGCTGCGCACTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTTTGTGGAGTTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS TCA 90 bp GGTGCCCTGCAGAAGGACGGGGTCCTTCCGGGGAGCCCAAACAAGTaGGCCTTCCAGCAGAAGCGCAAGCACGTCTTCAGCGTGAACCTT +
Preference number: 5 (lower is better)
Translates to: GALQKDGVLPGSPNK*AFQQKRKHVFSVNL
Trigger: AAGGTTCACGCTGAAGACGTGCTTGCGCTTCTGCTGGAAGGCTCACTTGTTTGGGCTCCCCGGAAGGACCCCGTCCTTCTGCAGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS TCA 90 bp TGGAGCGGCCATTCCCCACTGCAGAGAGACTCGGACTCCCAGTGCTaGGAGCGGAGCCCAGAACACCAGATACCAGCTTGGAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: WSGHSPLQRDSDSQC*ERSPEHQIPAWRSQ
Trigger: CTGACTCCTCCAAGCTGGTATCTGGTGTTCTGGGCTCCGCTCTCAGCACTGGGAGTCCGAGTCTCTCTGCAGTGGGGAATGGCCGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGGTAGACGGTGGCTGCTaGGCTCTCTGCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMVDGGC*ALCSSP
Trigger: AGGGCTGGAGCAGAGAGCCAAGCAGCCACCGTCTAC...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CAA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCAGAAGCAACAGCCGCTaGCCCACCGGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPRSNSR*PTGEAA
Trigger: GGCGGCCTCCCCGGTGGGCAAGCGGCTGTTGCTTCT...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS TCA 90 bp CCTCTGGGGCCAAAGGTGTCTGACCTGTGGCTGAAGCATACGGAGTaGAAGGGACGGGCGTATCCCCACCTACAGGCTCATCCTGTACCA +
Preference number: 5 (lower is better)
Translates to: PLGPKVSDLWLKHTE*KGRAYPHLQAHPVP
Trigger: TGGTACAGGATGAGCCTGTAGGTGGGGATACGCCCGTCCCTTTCACTCCGTATGCTTCAGCCACAGGTCAGACACCTTTGGCCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS TCA 90 bp TTCAGCTCCACCTACCTCTGGGGCCAAAGGTGTCTGACCTGTGGCTaGAGCATACGGAGTGAAAGGGACGGGCGTATCCCCACCTACAGG +
Preference number: 5 (lower is better)
Translates to: FSSTYLWGQRCLTCG*SIRSERDGRIPTYR
Trigger: CCTGTAGGTGGGGATACGCCCGTCCCTTTCACTCCGTATGCTTCAGCCACAGGTCAGACACCTTTGGCCCCAGAGGTAGGTGGAGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS CCA 90 bp CTCTGCAGGCACTTTTCGGTCCACAGAGCTGCCGGCCTTGGGACCTaGCTGAGTATCTGCTCCGAGAACAGATCTGCCTTTACACAGGCC +
Preference number: 5 (lower is better)
Translates to: LCRHFSVHRAAGLGT*LSICSENRSAFTQA
Trigger: GGCCTGTGTAAAGGCAGATCTGTTCTCGGAGCAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTGTGGACCGAAAAGTGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp CTCTCTTCTGTGGGACTGGAGGAGAGAGTAGGCATCTCAATAGGTTaGGTGAGGCTGTTGGTGGGCGAGCTGGAGCGGCCATTCCCCACT +
Preference number: 5 (lower is better)
Translates to: LSSVGLEERVGISIG*VRLLVGELERPFPT
Trigger: AGTGGGGAATGGCCGCTCCAGCTCGCCCACCAACAGCCTCACCCAACCTATTGAGATGCCTACTCTCTCCTCCAGTCCCACAGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp CTAGCTTCCCCATCAGGTGCTCTGGAATCCCCTTCAGGCCACTCTTaGCCTGCAGCTGCTCCTCTGAGTCGCTCAGATCTGACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: LASPSGALESPSGHS*PAAAPLSRSDLTGH
Trigger: GTGACCTGTCAGATCTGAGCGACTCAGAGGAGCAGCTGCAGGCCAAGAGTGGCCTGAAGGGGATTCCAGAGCACCTGATGGGGAAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GGGTCGAGCACATTCAGCCCCATCGCCATCTCCTTCACCTCCTTCTaGGTGTCGGTCAGGTTGCAGGACCGCTTTGAGGGATCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: GSSTFSPIAISFTSF*VSVRLQDRFEGSEV
Trigger: AACCTCAGATCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCAGAAGGAGGTGAAGGAGATGGCGATGGGGCTGAATGTGCTCGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAGAAGCAACAGCCGCTaGCCCACCGGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSRSNSR*PTGEAA
Trigger: GGCGGCCTCCCCGGTGGGCAAGCGGCTGTTGCTTCT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGCAGGCTCTCGAGGCTTaGTGTGAAGGAATCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVQALEA*CEGIPA
Trigger: AGCAGGGATTCCTTCACACAAAGCCTCGAGAGCCTG...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGGTTTTGAGGAGCGGATaGTCCTGCTGGCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWVLRSG*SCWPGP
Trigger: GGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAAC...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGCCAGGGGGCCAGTCTTaGAGTTTGAGCACCATTGGC +
Preference number: 5 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMPGGQS*SLSTIG
Trigger: GCCAATGGTGCTCAAACTCAAAGACTGGCCCCCTGG...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 90 bp CGGTTAATCTGGGGAACAAATGTAGACGGTGGCTGCTTGGCTCTCTaGTCCAGCCCTGGCTCTCCACTGGCATTACCTCCTTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RLIWGTNVDGGCLAL*SSPGSPLALPPFQG
Trigger: GCCCTGGAAAGGAGGTAATGCCAGTGGAGAGCCAGGGCTGGAGCAGAGAGCCAAGCAGCCACCGTCTACATTTGTTCCCCAGATTAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS GCA 90 bp GCCACGTTGATGCAGGAGCCGTCCTGCAGGAAGGGCTCTCCAGACTaGTTCAGCTTCCTTACTTTACTCACGTCCTTCAGCACCGACTGG +
Preference number: 5 (lower is better)
Translates to: ATLMQEPSCRKGSPD*FSFLTLLTSFSTDW
Trigger: CCAGTCGGTGCTGAAGGACGTGAGTAAAGTAAGGAAGCTGAAGCAGTCTGGAGAGCCCTTCCTGCAGGACGGCTCCTGCATCAACGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GCATGGACTCTGCAGGCACTTTTCGGTCCACAGAGCTGCCGGCCTTaGGACCTGGCTGAGTATCTGCTCCGAGAACAGATCTGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: AWTLQALFGPQSCRP*DLAEYLLREQICLY
Trigger: GTAAAGGCAGATCTGTTCTCGGAGCAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTGTGGACCGAAAAGTGCCTGCAGAGTCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GGTCTATTCCTTCTGCTAGGGAGGAAGAGGGGATCCACAGGTTCATaGCATCCGGGTCACTCTGCTGGGGGCTCAGAAATCCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: GLFLLLGRKRGSTGS*HPGHSAGGSEIPPH
Trigger: GTGTGGAGGGATTTCTGAGCCCCCAGCAGAGTGACCCGGATGCCATGAACCTGTGGATCCCCTCTTCCTCCCTAGCAGAAGGAATAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCAGAAGCAACAGCCGCTaGCCCACCGGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: QALTRHSKSSPYVASYDFRSNSR*PTGEAA
Trigger: GGCGGCCTCCCCGGTGGGCAAGCGGCTGTTGCTTCT...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGTCCTGTTCCTTAAACTaGCGGTACCTCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMSCSLN*RYLSRR
Trigger: CCGCCTGGAGAGGTACCGCAAGTTTAAGGAACAGGA...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGGGTTGCAGGACCGCTTaGAGGGATCTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVGCRTA*RDLRFS
Trigger: AGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACC...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGGGCCAGTCTTTGAGTTaGAGCACCATTGGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMGQSLS*STIGCP
Trigger: TGGGCAGCCAATGGTGCTCAAACTCAAAGACTGGCC...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 90 bp GCAGCTGCTCCTCTGAGTCGCTCAGATCTGACAGGTCACTGTTGGTaGTGGAGTCCGAATCCTGTCTGCAAGCCAAGCTTCGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: AAAPLSRSDLTGHCW*WSPNPVCKPSFAHP
Trigger: TGGATGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGTCAGATCTGAGCGACTCAGAGGAGCAGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 90 bp CCAGGGATGATCTGGGTGGGCATGAGGTTTTCTGGTTCGTGGGACTaGCCCTTTGCACACTTCAGCCAGGAGAAAACTTCCTCATCCCCC +
Preference number: 5 (lower is better)
Translates to: PGMIWVGMRFSGSWD*PFAHFSQEKTSSSP
Trigger: GGGGGATGAGGAAGTTTTCTCCTGGCTGAAGTGTGCAAAGGGGCAGTCCCACGAACCAGAAAACCTCATGCCCACCCAGATCATCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GAAGGTTTTGAGGAGCGGATTGTCCTGCTGGCCAGGCCCCACAGTTaGCCTCTCTTCTGTGGGACTGGAGGAGAGAGTAGGCATCTCAAT +
Preference number: 5 (lower is better)
Translates to: EGFEERIVLLARPHS*PLFCGTGGESRHLN
Trigger: ATTGAGATGCCTACTCTCTCCTCCAGTCCCACAGAAGAGAGGCCAACTGTGGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp CCTGCAGCTGCTCCTCTGAGTCGCTCAGATCTGACAGGTCACTGTTaGTGCTGGAGTCCGAATCCTGTCTGCAAGCCAAGCTTCGCTCAT +
Preference number: 5 (lower is better)
Translates to: PAAAPLSRSDLTGHC*CWSPNPVCKPSFAH
Trigger: ATGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGTCAGATCTGAGCGACTCAGAGGAGCAGCTGCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGCTGGGATCTACTGACTaGACCTCACCAGTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVLGSTD*TSPVSV
Trigger: AACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCAG...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATGGGGCCTGCTTCCCTTaGCCCTTGCCCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDGACFP*PLPSSS
Trigger: GCTGCTACTGGGCAAGGGCAAAGGGAAGCAGGCCCC...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGTGGGTGTCGGTCAGGTaGCAGGACCGCTTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GLKPGECAGEPSNVQATWWVSVR*QDRFEG
Trigger: TCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCA...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CCTTCCGGAGCAGCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCCCAGGGGGCCAGTCTTaGAGTTTGAGCACCATTGGC +
Preference number: 5 (lower is better)
Translates to: PSGAALGSSLHPSLHKCAPGGQS*SLSTIG
Trigger: GCCAATGGTGCTCAAACTCAAAGACTGGCCCCCTGG...GGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGCTGCTCCGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS TCA 90 bp ACCGACCGCAGGGACCCTGCATCTTTCGTTTCTTCTTTCGCCTTCTaGGTTGCTAAGTCGGCCAACCAATGCAGAGCAGAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TDRRDPASFVSSFAF*VAKSANQCRAEEGG
Trigger: CCCTCCTTCCTCTGCTCTGCATTGGTTGGCCGACTTAGCAACTCAGAAGGCGAAAGAAGAAACGAAAGATGCAGGGTCCCTGCGGTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GCTGCTCCTCTGAGTCGCTCAGATCTGACAGGTCACTGTTGGTGCTaGAGTCCGAATCCTGTCTGCAAGCCAAGCTTCGCTCATCCAATG +
Preference number: 5 (lower is better)
Translates to: AAPLSRSDLTGHCWC*SPNPVCKPSFAHPM
Trigger: CATTGGATGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGTCAGATCTGAGCGACTCAGAGGAGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAGTAGACGGTGGCTGCTaGGCTCTCTGCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: HIGQTSRSGPERTQAESVVDGGC*ALCSSP
Trigger: AGGGCTGGAGCAGAGAGCCAAGCAGCCACCGTCTAC...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CAA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGAGGCATCTCAATAGGTaGGGTGAGGCTGTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWRHLNR*GEAVGG
Trigger: CCCACCAACAGCCTCACCCAACCTATTGAGATGCCT...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGGTTTTGAGGAGCGGATaGTCCTGCTGGCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMVLRSG*SCWPGP
Trigger: GGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAAC...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATTCCCAAAAGGCCACTGGTCTGACAGGTCACTGTaGGTGCTGGAGTCCGAATCC +
Preference number: 5 (lower is better)
Translates to: VQESPAMFKQPGFPKGHWSDRSL*VLESES
Trigger: GGATTCGGACTCCAGCACCAACAGTGACCTGTCAGA...CCAGTGGCCTTTTGGGAATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGAGCACCTTTGGGAACTaGGTCTGGCTCTGGATTTGT +
Preference number: 5 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMSTFGN*VWLWIC
Trigger: ACAAATCCAGAGCCAGACCAAGTTCCCAAAGGTGCT...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGCTTTCGCCTTCTGAGTaGCTAAGTCGGCCAACCAAT +
Preference number: 5 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERLSPSE*LSRPTN
Trigger: ATTGGTTGGCCGACTTAGCAACTCAGAAGGCGAAAG...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 90 bp TTGGTCTGGCTCTGGATTTGTGACCGCTGCAGCTCCGCCTCCGCTTaGGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGGGGTTACACT +
Preference number: 5 (lower is better)
Translates to: LVWLWICDRCSSASA*EGSFVSRRGTRGYT
Trigger: AGTGTAACCCCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCAAGCGGAGGCGGAGCTGCAGCGGTCACAAATCCAGAGCCAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 90 bp GCATCAACAATGGAGGAAGAGTTAACCCAGATCTGCAGTCTGCCCTaGAGCAACTCACCTCTCCTGAGGCCTGCGACCAGCTGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: ASTMEEELTQICSLP*SNSPLLRPATSCLS
Trigger: AGAAAGGCAGCTGGTCGCAGGCCTCAGGAGAGGTGAGTTGCTTCAGGGCAGACTGCAGATCTGGGTTAACTCTTCCTCCATTGTTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS CCA 90 bp GTGGAGCTGGCGGTAGTGACTACAGCTGCTGAAGCCACCATGCCCTaGCTAACTTGTTCCAGCGTTTTTCCCGCCTCTTTGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: VELAVVTTAAEATMP*LTCSSVFPASLFSA
Trigger: AGCTGAAAACAAAGAGGCGGGAAAAACGCTGGAACAAGTTAGCCAGGGCATGGTGGCTTCAGCAGCTGTAGTCACTACCGCCAGCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS-3UTR CAA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGACACCAGATACCAGCTaGGAGGAGTCAGTTGTAATA +
Preference number: 5 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVTPDTS*EESVVI
Trigger: TATTACAACTGACTCCTCCAAGCTGGTATCTGGTGT...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGTCCTGTTCCTTAAACTaGCGGTACCTCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GLKPGECAGEPSNVQATWSCSLN*RYLSRR
Trigger: CCGCCTGGAGAGGTACCGCAAGTTTAAGGAACAGGA...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAACGTGGGACTGCCCCTTaGCACACTTCAGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQRGTAP*HTSARR
Trigger: TCTCCTGGCTGAAGTGTGCAAAGGGGCAGTCCCACG...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGACCCTCAGTTTTGCTGTaGGAGGCAGTGGGACCCAGT +
Preference number: 5 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGPSVLL*EAVGPS
Trigger: ACTGGGTCCCACTGCCTCCAACAGCAAAACTGAGGG...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 90 bp CAAACAAGTGAGCCTTCCAGCAGAAGCGCAAGCACGTCTTCAGCGTaGACCTTAACCCAGGAGTGCTGCTTCCAGTTACAGCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: QTSEPSSRSASTSSA*TLTQECCFQLQPSN
Trigger: GTTTGACGGCTGTAACTGGAAGCAGCACTCCTGGGTTAAGGTTCACGCTGAAGACGTGCTTGCGCTTCTGCTGGAAGGCTCACTTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS TCA 90 bp TGGCTGAGTATCTGCTCCGAGAACAGATCTGCCTTTACACAGGCCTaGAGTCAGGCTCTCGAGGCTTTGTGTGAAGGAATCCCTGCTCGA +
Preference number: 5 (lower is better)
Translates to: WLSICSENRSAFTQA*SQALEALCEGIPAR
Trigger: TCGAGCAGGGATTCCTTCACACAAAGCCTCGAGAGCCTGACTTCAGGCCTGTGTAAAGGCAGATCTGTTCTCGGAGCAGATACTCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 90 bp TGCTATTTGACGCAGAACCTTCTGCTTTTAGGGGCTCCTCAGATCTaGCGTCAGTGCCAGCACCTTTGGGAACTTGGTCTGGCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: CYLTQNLLLLGAPQI*RQCQHLWELGLALD
Trigger: ATCCAGAGCCAGACCAAGTTCCCAAAGGTGCTGGCACTGACGGCAGATCTGAGGAGCCCCTAAAAGCAGAAGGTTCTGCGTCAAATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGAGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTGGCTAAAACTCCATaGGACTGGCTCCGTCCACTT +
Preference number: 5 (lower is better)
Translates to: GDTARLSPGTVSHHLMLPVAKTP*DWLRPL
Trigger: AAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCAC...TGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTCTGACAGGTCACTGTaGGTGCTGGAGTCCGAATCC +
Preference number: 5 (lower is better)
Translates to: RHCQALTRHSKSSPYVASSDRSL*VLESES
Trigger: GGATTCGGACTCCAGCACCAACAGTGACCTGTCAGA...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCTGCTTCCCTTTGCCCTaGCCCAGTAGCAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSCFPLP*PSSSSA
Trigger: TGCTGAGCTGCTACTGGGCAAGGGCAAAGGGAAGCA...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCCGTGGGACTGCCCCTTaGCACACTTCAGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QALTRHSKSSPYVASYDFRGTAP*HTSARR
Trigger: TCTCCTGGCTGAAGTGTGCAAAGGGGCAGTCCCACG...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGTCGGGTAGGCTGGCTTaGCTCTTCGCTACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLSGRLA*LFATAE
Trigger: CTCAGCAGTAGCGAAGAGCAAAGCCAGCCTACCCGA...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGAAAGGTTCCAGAGTTCAGACTaGAGCTTTTTATGCACCCCT +
Preference number: 5 (lower is better)
Translates to: GPLLLQRTLPFPGKCCERFQSSD*SFLCTP
Trigger: AGGGGTGCATAAAAAGCTCAAGTCTGAACTCTGGAA...CCTTTCACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGCTCCTGGGGTCAGCAGTTCACGTGCAGGGAACACTCCGAAGCTCAGACATGTTCCAGAGTTCAGACTaGAGCTTTTTATGCACCCCT +
Preference number: 5 (lower is better)
Translates to: QLLGSAVHVQGTLRSSDMFQSSD*SFLCTP
Trigger: AGGGGTGCATAAAAAGCTCAAGTCTGAACTCTGGAA...CATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGAACTGCTGACCCCAGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGCCAGTCTTTGAGTTaGAGCACCATTGGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAGQSLS*STIGCP
Trigger: TGGGCAGCCAATGGTGCTCAAACTCAAAGACTGGCC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 90 bp AAGAGGGGCTTTTTCTTTGCTAAAGGTGCAGACTCTGCAGAGGAGTaGGACTCAGGCCAGCTGGCTGTTGCCTTTGAGGTGACAGAGGTA +
Preference number: 5 (lower is better)
Translates to: KRGFFFAKGADSAEE*DSGQLAVAFEVTEV
Trigger: TACCTCTGTCACCTCAAAGGCAACAGCCAGCTGGCCTGAGTCTCACTCCTCTGCAGAGTCTGCACCTTTAGCAAAGAAAAAGCCCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GAGGGATCTGAGGTTTTCTTGTTTTCTACCACTGAGGCGATGATGTaGTCGAGGAAGTCGGGTAGGCTGGCTTTGCTCTTCGCTACTGCT +
Preference number: 5 (lower is better)
Translates to: EGSEVFLFSTTEAMM*SRKSGRLALLFATA
Trigger: AGCAGTAGCGAAGAGCAAAGCCAGCCTACCCGACTTCCTCGACCACATCATCGCCTCAGTGGTAGAAAACAAGAAAACCTCAGATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp CTTGTTTCCAACACTCTCGGAAGATCTTCCAGTTATTTTTGTTGCTaGGGTCATGGAGACACAGAAGGCGCCCGTCGCAGAGCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: LVSNTLGRSSSYFCC*GHGDTEGARRRARS
Trigger: ACTCCTGGCTCTGCGACGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAAAAATAACTGGAAGATCTTCCGAGAGTGTTGGAAACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGGTGGCAAAGCGAATGTaGCGGTTAATCTGGGGAACA +
Preference number: 5 (lower is better)
Translates to: GLKPGECAGEPSNVQATWVAKRM*RLIWGT
Trigger: TGTTCCCCAGATTAACCGCAACATTCGCTTTGCCAC...CCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CAA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGTGGCTAAAACTCCATaGGACTGGCTCCGTCCACTT +
Preference number: 5 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAVAKTP*DWLRPL
Trigger: AAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCAC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGCAGGCTCTCGAGGCTTaGTGTGAAGGAATCCCTGCT +
Preference number: 5 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLQALEA*CEGIPA
Trigger: AGCAGGGATTCCTTCACACAAAGCCTCGAGAGCCTG...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGAGGCATCTCAATAGGTaGGGTGAGGCTGTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMRHLNR*GEAVGG
Trigger: CCCACCAACAGCCTCACCCAACCTATTGAGATGCCT...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCTGCTTCCCTTTGCCCTaGCCCAGTAGCAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: QALTRHSKSSPYVASYDFCFPLP*PSSSSA
Trigger: TGCTGAGCTGCTACTGGGCAAGGGCAAAGGGAAGCA...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGGAAGGGCCTCTGCTCCTGCAGAGAACCCTGCCGTTCCCTGGTAAGTGTTGTGTGGCCAAGATGTATTTaGAGGTTTCTAGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: GKGLCSCREPCRSLVSVVWPRCI*RFLGLF
Trigger: GAATAGACCTAGAAACCTCAAAATACATCTTGGCCA...CACAACACTTACCAGGGAACGGCAGGGTTCTCTGCAGGAGCAGAGGCCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGTTGCAGGACCGCTTaGAGGGATCTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAGCRTA*RDLRFS
Trigger: AGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTAGCCTAGAAGCCAGATaGAGCCTGCCATCTCGTTTG +
Preference number: 5 (lower is better)
Translates to: RHCQALTRHSKSSPYVASSLEAR*SLPSRL
Trigger: CAAACGAGATGGCAGGCTCAATCTGGCTTCTAGGCT...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 90 bp GAGACTTTTGCAGTAGAGTTGAATGAGTCCAGCCCAAAGGGTGAATaGGACTCCTTATTGAGCACCGACCGCAGGGACCCTGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: ETFAVELNESSPKGE*DSLLSTDRRDPASF
Trigger: GAAAGATGCAGGGTCCCTGCGGTCGGTGCTCAATAAGGAGTCTCATTCACCCTTTGGGCTGGACTCATTCAACTCTACTGCAAAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 90 bp GCTTTGAGGGATCTGAGGTTTTCTTGTTTTCTACCACTGAGGCGATaGTGTGGTCGAGGAAGTCGGGTAGGCTGGCTTTGCTCTTCGCTA +
Preference number: 5 (lower is better)
Translates to: ALRDLRFSCFLPLRR*CGRGSRVGWLCSSL
Trigger: TAGCGAAGAGCAAAGCCAGCCTACCCGACTTCCTCGACCACATCATCGCCTCAGTGGTAGAAAACAAGAAAACCTCAGATCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp CTTGAATTCTCACTCTGTGGTGTCGAGCTGTCCATCAGCATCACGTaGGTGAGTCTGGGATCTACTGACTTGACCTCACCAGTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LEFSLCGVELSISIT*VSLGSTDLTSPVSV
Trigger: AACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCAGACTCACCCACGTGATGCTGATGGACAGCTCGACACCACAGAGTGAGAATTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGACTGGGATCTACTGACTaGACCTCACCAGTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGLGSTD*TSPVSV
Trigger: AACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCAG...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCCTGGGATCTACTGACTaGACCTCACCAGTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPLGSTD*TSPVSV
Trigger: AACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCAG...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CAA 90 bp CAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTATCAGAACTCTCCCGTTTTTCCCGCCTCTTaGTTTTCAGCTCCACCTACC +
Preference number: 5 (lower is better)
Translates to: QAGVVQREHKLSLYQNSPVFPAS*FSAPPT
Trigger: GGTAGGTGGAGCTGAAAACAAAGAGGCGGGAAAAAC...GGGAGAGTTCTGATACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CAA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATACGGTACTGAAGGTTTaGAGGAGCGGATTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDTVLKV*RSGLSC
Trigger: GCAGGACAATCCGCTCCTCAAAACCTTCAGTACCGT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAAGCACCTTTGGGAACTaGGTCTGGCTCTGGATTTGT +
Preference number: 5 (lower is better)
Translates to: RCAHIPGFHGLKPGECAGSTFGN*VWLWIC
Trigger: ACAAATCCAGAGCCAGACCAAGTTCCCAAAGGTGCT...TCCTGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAGCCTAGAAGCCAGATaGAGCCTGCCATCTCGTTTG +
Preference number: 5 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSSLEAR*SLPSRL
Trigger: CAAACGAGATGGCAGGCTCAATCTGGCTTCTAGGCT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AAATCCACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTTTCCTCTCCTTCGGGTaGGTAGACCTTGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: KSTLAKQAGVVQREHKLSFLSFG*VDLDSV
Trigger: CACAGAGTCAAGGTCTACCAACCCGAAGGAGAGGAA...ACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CAA 90 bp CACATTGGCCAAACAAGCAGGAGTGGTCCAGAGAGAACACAAGCTGAGTCTGTAGTGGCAAAGCGAATGTaGCGGTTAATCTGGGGAACA +
Preference number: 5 (lower is better)
Translates to: HIGQTSRSGPERTQAESVVAKRM*RLIWGT
Trigger: TGTTCCCCAGATTAACCGCAACATTCGCTTTGCCAC...TACAGACTCAGCTTGTGTTCTCTCTGGACCACTCCTGCTTGTTTGGCCAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224715.2
CDS-3UTR CAA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGGTTTTTCCCGCCTCTTaGTTTTCAGCTCCACCTACC +
Preference number: 5 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMVFPAS*FSAPPT
Trigger: GGTAGGTGGAGCTGAAAACAAAGAGGCGGGAAAAAC...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CAA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACGGGGCCTGCTTCCCTTaGCCCTTGCCCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: FIERKTNCNVPFLIVQENGACFP*PLPSSS
Trigger: GCTGCTACTGGGCAAGGGCAAAGGGAAGCAGGCCCC...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAACAGACCCAGTGGATATaGAAGAGGGTTGTCTCACAC +
Preference number: 5 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQQTQWI*KRVVSH
Trigger: GTGTGAGACAACCCTCTTCAATATCCACTGGGTCTG...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATCAGACCCAGTGGATATaGAAGAGGGTTGTCTCACAC +
Preference number: 5 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDQTQWI*KRVVSH
Trigger: GTGTGAGACAACCCTCTTCAATATCCACTGGGTCTG...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAAGCTGTGATATCCCATaGGTGACAGCAGGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: GRCAHIPGFHGLKPGECASCDIP*VTAGLK
Trigger: TTTGAGACCTGCTGTCACCAATGGGATATCACAGCT...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTAGCTGTGATATCCCATaGGTGACAGCAGGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: RHCQALTRHSKSSPYVASSCDIP*VTAGLK
Trigger: TTTGAGACCTGCTGTCACCAATGGGATATCACAGCT...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGCTTTCGCCTTCTGAGTaGCTAAGTCGGCCAACCAAT +
Preference number: 5 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLLSPSE*LSRPTN
Trigger: ATTGGTTGGCCGACTTAGCAACTCAGAAGGCGAAAG...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTAGCCTGCCATCTCGTTaGGTATATTCTGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: RHCQALTRHSKSSPYVASSLPSR*VYSGRG
Trigger: TCCTCTTCCAGAATATACCAAACGAGATGGCAGGCT...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAATCTGGAGGATTCTCTaGGCCTTGCTCTTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQIWRIL*ALLFSN
Trigger: GTTGGAGAAGAGCAAGGCCAAGAGAATCCTCCAGAT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS GCA 90 bp TCAGATCTGACAGGTCACTGTTGGTGCTGGAGTCCGAATCCTGTCTaGAAGCCAAGCTTCGCTCATCCAATGAGAACCTTTTTACAGCTT +
Preference number: 5 (lower is better)
Translates to: SDLTGHCWCWSPNPV*KPSFAHPMRTFLQL
Trigger: AAGCTGTAAAAAGGTTCTCATTGGATGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGTCAGATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AGACACTGCCAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTACTTTTGCAGTAGAGTaGAATGAGTCCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RHCQALTRHSKSSPYVASTFAVE*NESSPK
Trigger: CTTTGGGCTGGACTCATTCAACTCTACTGCAAAAGT...ACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTGGCAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGGATCTGAGGTTTTCTaGTTTTCTACCACTGAGGCG +
Preference number: 5 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQGSEVF*FSTTEA
Trigger: CGCCTCAGTGGTAGAAAACAAGAAAACCTCAGATCC...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATAGCCTGCCATCTCGTTaGGTATATTCTGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDSLPSR*VYSGRG
Trigger: TCCTCTTCCAGAATATACCAAACGAGATGGCAGGCT...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp CAGGCTCTCACCAGGCACAGTAAGTCATCACCTTATGTTGCCAGTTATGACTTCCACAATGGCCCAGCCTaGCACACCATACTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QALTRHSKSSPYVASYDFHNGPA*HTILFK
Trigger: TTTGAAGAGTATGGTGTGCAAGGCTGGGCCATTGTG...GAAGTCATAACTGGCAACATAAGGTGATGACTTACTGTGCCTGGTGAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGAGAAGCCCAAAGGCTaGTTATCTGTGGCTAAAACT +
Preference number: 5 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQEKPKG*LSVAKT
Trigger: AGTTTTAGCCACAGATAACAAGCCTTTGGGCTTCTC...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAACACCAGATACCAGCTaGGAGGAGTCAGTTGTAATA +
Preference number: 5 (lower is better)
Translates to: GFHGLKPGECAGEPSNVQTPDTS*EESVVI
Trigger: TATTACAACTGACTCCTCCAAGCTGGTATCTGGTGT...TTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGGCTTCAAAAGGTGCTTaGTTCTCCTGTGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMASKGA*FSCANS
Trigger: AGAGTTTGCACAGGAGAACAAAGCACCTTTTGAAGC...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGGCTTCAAAAGGTGCTTaGTTCTCCTGTGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLASKGA*FSCANS
Trigger: AGAGTTTGCACAGGAGAACAAAGCACCTTTTGAAGC...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TTTCCATGGTCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCACTTTTGCAGTAGAGTaGAATGAGTCCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: FPWSQTRRMCRRAQQCSSTFAVE*NESSPK
Trigger: CTTTGGGCTGGACTCATTCAACTCTACTGCAAAAGT...GCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGACCATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 90 bp GAGAAGCCCAAAGGCTTGTTATCTGTGGCTAAAACTCCATTGGACTaGCTCCGTCCACTTCCAAAAGTCAATGGTTGTGACAAACTTGAG +
Preference number: 5 (lower is better)
Translates to: EKPKGLLSVAKTPLD*LRPLPKVNGCDKLE
Trigger: CTCAAGTTTGTCACAACCATTGACTTTTGGAAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCACAGATAACAAGCCTTTGGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGCAGGTCTCAAAACAGATTaGCTTTGCCGACTTATACAA +
Preference number: 5 (lower is better)
Translates to: GRCAHIPGFHGLKPGECAGLKTD*LCRLIQ
Trigger: TTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGACC...TGCACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCTCAAACCAGGAGAATGTGCAGGAGAGCCCAGCAATGTTCAAGCAACCTGGATGTTCACTATTGCTATTaGACGCAGAACCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SQTRRMCRRAQQCSSNLDVHYCY*TQNLLL
Trigger: AAGCAGAAGGTTCTGCGTCAAATAGCAATAGTGAAC...ATCCAGGTTGCTTGAACATTGCTGGGCTCTCCTGCACATTCTCCTGGTTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGGTTCACTATTGCTATTaGACGCAGAACCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLVHYCY*TQNLLL
Trigger: AAGCAGAAGGTTCTGCGTCAAATAGCAATAGTGAAC...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS GCA 90 bp TGTGATATCCCATTGGTGACAGCAGGTCTCAAAACAGATTTGCTTTaGCGACTTATACAAGGGCAGTTAGCTTTAATCCCCCACTTTCCC +
Preference number: 5 (lower is better)
Translates to: CDIPLVTAGLKTDLL*RLIQGQLALIPHFP
Trigger: GGGAAAGTGGGGGATTAAAGCTAACTGCCCTTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGACCTGCTGTCACCAATGGGATATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp GCTCTCGGATCTTCTCTGCATCCTTCGCTGCATAAATGTGCCATAAAGCTCCTGTGGCCAAGATGTATTTaGAGGTTTCTAGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: ALGSSLHPSLHKCAIKLLWPRCI*RFLGLF
Trigger: GAATAGACCTAGAAACCTCAAAATACATCTTGGCCA...CAGGAGCTTTATGGCACATTTATGCAGCGAAGGATGCAGAGAAGATCCGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAATGGGTGTCGGTCAGGTaGCAGGACCGCTTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKWVSVR*QDRFEG
Trigger: TCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCA...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTAACTTTGGTCATGAATaGGGTCATGATCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECNFGHE*GHDLED
Trigger: ATCCTCCAGATCATGACCCAATTCATGACCAAAGTT...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CAA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACACGGTACTGAAGGTTTaGAGGAGCGGATTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: FIERKTNCNVPFLIVQENTVLKV*RSGLSC
Trigger: GCAGGACAATCCGCTCCTCAAAACCTTCAGTACCGT...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TCACGTGCAGGGAACACTCCGAAGCTCAGACATGATGCAGTTCTTTCTCAGATGTACAGTAGAATCATCTaGCTCCTGTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: SRAGNTPKLRHDAVLSQMYSRII*LLFLKL
Trigger: AAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTA...CATCTGAGAAAGAACTGCATCATGTCTGAGCTTCGGAGTGTTCCCTGCACGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTGGTCTCAAAACAGATTaGCTTTGCCGACTTATACAA +
Preference number: 5 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECGLKTD*LCRLIQ
Trigger: TTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGACC...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAACCCTCAGTTTTGCTGTaGGAGGCAGTGGGACCCAGT +
Preference number: 5 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKPSVLL*EAVGPS
Trigger: ACTGGGTCCCACTGCCTCCAACAGCAAAACTGAGGG...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAATCGGGTAGGCTGGCTTaGCTCTTCGCTACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKSGRLA*LFATAE
Trigger: CTCAGCAGTAGCGAAGAGCAAAGCCAGCCTACCCGA...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp TTTATCGAAAGGAAGACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAGGATTCTCTTGGCCTaGCTCTTCTCCAACCTTCCG +
Preference number: 5 (lower is better)
Translates to: FIERKTNCNVPFLIVQENRILLA*LFSNLP
Trigger: CGGAAGGTTGGAGAAGAGCAAGGCCAAGAGAATCCT...GTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGTCTTCCTTTCGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS-3UTR CAA 90 bp AAAGGAAGGTGTGCCCACATTCCTGGTTTCCATGGTCTCAAACCAGGAGAATGTTACAGTAGAATCATCTaGCTCCTGTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: KGRCAHIPGFHGLKPGECYSRII*LLFLKL
Trigger: AAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTA...ACATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS-3UTR CAA 90 bp ACTAACTGTAATGTGCCTTTCCTCATAGTCCAGGAAAACAACTGTTATTTCAAATTCCTCTCCTTCGGGTaGGTAGACCTTGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: TNCNVPFLIVQENNCYFKFLSFG*VDLDSV
Trigger: CACAGAGTCAAGGTCTACCAACCCGAAGGAGAGGAA...TTTGAAATAACAGTTGTTTTCCTGGACTATGAGGAAAGGCACATTACAGTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp TCATGGCCCGCACCGTGCCGGCCCTCCAGGCCCGAGTaGGCAGCGCAGGCCCAGGATCTCCGCTCACTACCG +
Preference number: 6 (lower is better)
Translates to: SWPAPCRPSRPE*AAQAQDLRSLP
Trigger: CGGTAGTGAGCGGAGATCCTGGGCCTGCGCTGCGCACTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CCA 72 bp CAAAGATCGCTAGGTCCTGGGGCACCGCCCCGCTCATaGCCCGCACCGTGCCGGCCCTCCAGGCCCGAGTGC +
Preference number: 6 (lower is better)
Translates to: QRSLGPGAPPRS*PAPCRPSRPEC
Trigger: GCACTCGGGCCTGGAGGGCCGGCACGGTGCGGGCCATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CCA 72 bp TTACAGCCGTCAAACTCCACAAAGATCGCTAGGTCCTaGGGCACCGCCCCGCTCATGGCCCGCACCGTGCCG +
Preference number: 6 (lower is better)
Translates to: LQPSNSTKIARS*GTAPLMARTVP
Trigger: CGGCACGGTGCGGGCCATGAGCGGGGCGGTGCCCCAGGACCTAGCGATCTTTGTGGAGTTTGACGGCTGTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS TCA 72 bp TACCTCTCCAGGCGGCACTCTCGGCACTTGTGCAAGTaGGGCGCCACGTTGATGCAGGAGCCGTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: YLSRRHSRHLCK*GATLMQEPSCR
Trigger: CCTGCAGGACGGCTCCTGCATCAACGTGGCGCCTCACTTGCACAAGTGCCGAGAGTGCCGCCTGGAGAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp TGGAGACACAGAAGGCGCCCGTCGCAGAGCCAGGAGTaGGACGTGTGGGGGTCGAGCACATTCAGCCCCATC +
Preference number: 6 (lower is better)
Translates to: WRHRRRPSQSQE*DVWGSSTFSPI
Trigger: GATGGGGCTGAATGTGCTCGACCCCCACACGTCTCACTCCTGGCTCTGCGACGGGCGCCTTCTGTGTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp CCGTGGGAAGGCTGGAGTAAGGGTGGGCATGGACTCTaGAGGCACTTTTCGGTCCACAGAGCTGCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: PWEGWSKGGHGL*RHFSVHRAAGL
Trigger: AAGGCCGGCAGCTCTGTGGACCGAAAAGTGCCTGCAGAGTCCATGCCCACCCTTACTCCAGCCTTCCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp GAGGGGATCCACAGGTTCATGGCATCCGGGTCACTCTaGTGGGGGCTCAGAAATCCCTCCACACGGAGCACC +
Preference number: 6 (lower is better)
Translates to: EGIHRFMASGSL*WGLRNPSTRST
Trigger: GGTGCTCCGTGTGGAGGGATTTCTGAGCCCCCAGCAGAGTGACCCGGATGCCATGAACCTGTGGATCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp CCTTGCCCAGTAGCAGCTCAGCACTACGCTCCCCGTTaGGGCCTAGCTTCCCCATCAGGTGCTCTGGAATCC +
Preference number: 6 (lower is better)
Translates to: PCPVAAQHYAPR*GLASPSGALES
Trigger: GGATTCCAGAGCACCTGATGGGGAAGCTAGGCCCCAACGGGGAGCGTAGTGCTGAGCTGCTACTGGGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp CAGAAGGACGGGGTCCTTCCGGGGAGCCCAAACAAGTaGGCCTTCCAGCAGAAGCGCAAGCACGTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: QKDGVLPGSPNK*AFQQKRKHVFS
Trigger: GCTGAAGACGTGCTTGCGCTTCTGCTGGAAGGCTCACTTGTTTGGGCTCCCCGGAAGGACCCCGTCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS GCA 72 bp GCATGGACTCTGCAGGCACTTTTCGGTCCACAGAGCTaGCGGCCTTGGGACCTGGCTGAGTATCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: AWTLQALFGPQS*RPWDLAEYLLR
Trigger: TCGGAGCAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTGTGGACCGAAAAGTGCCTGCAGAGTCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GGACTGGAGGAGAGAGTAGGCATCTCAATAGGTTGGGTGAGGCTGTaGGTGGGCGAGCTGGAGCGGCCATTCCCCACTGCAGAGAGACTC +
Preference number: 6 (lower is better)
Translates to: GLEERVGISIGWVRL*VGELERPFPTAERL
Trigger: GAGTCTCTCTGCAGTGGGGAATGGCCGCTCCAGCTCGCCCACCAACAGCCTCACCCAACCTATTGAGATGCCTACTCTCTCCTCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp CCTCTCTTCTGTGGGACTGGAGGAGAGAGTAGGCATCTCAATAGGTaGGGTGAGGCTGTTGGTGGGCGAGCTGGAGCGGCCATTCCCCAC +
Preference number: 6 (lower is better)
Translates to: PLFCGTGGESRHLNR*GEAVGGRAGAAIPH
Trigger: GTGGGGAATGGCCGCTCCAGCTCGCCCACCAACAGCCTCACCCAACCTATTGAGATGCCTACTCTCTCCTCCAGTCCCACAGAAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp CTGCAGGCACTTTTCGGTCCACAGAGCTGCCGGCCTTaGGACCTGGCTGAGTATCTGCTCCGAGAACAGATC +
Preference number: 6 (lower is better)
Translates to: LQALFGPQSCRP*DLAEYLLREQI
Trigger: GATCTGTTCTCGGAGCAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTGTGGACCGAAAAGTGCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp CTGCCTGAGTGCCTGCCAAAGACGGTACTGAAGGTTTaGAGGAGCGGATTGTCCTGCTGGCCAGGCCCCACA +
Preference number: 6 (lower is better)
Translates to: LPECLPKTVLKV*RSGLSCWPGPT
Trigger: TGTGGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAACCTTCAGTACCGTCTTTGGCAGGCACTCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GCCCTGGCTCTCCACTGGCATTACCTCCTTTCCAGGGCCCTCGGCTaGCCTCACCTCCATCACTCCCATTACTGTCTACTTCACCCCTGT +
Preference number: 6 (lower is better)
Translates to: ALALHWHYLLSRALG*PHLHHSHYCLLHPC
Trigger: ACAGGGGTGAAGTAGACAGTAATGGGAGTGATGGAGGTGAGGCAAGCCGAGGGCCCTGGAAAGGAGGTAATGCCAGTGGAGAGCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS CAA 90 bp CCTGAGTGCCTGCCAAAGACGGTACTGAAGGTTTTGAGGAGCGGATaGTCCTGCTGGCCAGGCCCCACAGTTGGCCTCTCTTCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: PECLPKTVLKVLRSG*SCWPGPTVGLSSVG
Trigger: TCCCACAGAAGAGAGGCCAACTGTGGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAACCTTCAGTACCGTCTTTGGCAGGCACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GAGAGAAAGCTGCCTGAGTGCCTGCCAAAGACGGTACTGAAGGTTTaGAGGAGCGGATTGTCCTGCTGGCCAGGCCCCACAGTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: ERKLPECLPKTVLKV*RSGLSCWPGPTVGL
Trigger: GAGGCCAACTGTGGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAACCTTCAGTACCGTCTTTGGCAGGCACTCAGGCAGCTTTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp CCTAGCTTCCCCATCAGGTGCTCTGGAATCCCCTTCAGGCCACTCTaGGCCTGCAGCTGCTCCTCTGAGTCGCTCAGATCTGACAGGTCA +
Preference number: 6 (lower is better)
Translates to: PSFPIRCSGIPFRPL*ACSCSSESLRSDRS
Trigger: TGACCTGTCAGATCTGAGCGACTCAGAGGAGCAGCTGCAGGCCAAGAGTGGCCTGAAGGGGATTCCAGAGCACCTGATGGGGAAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GCCTGCAGCTGCTCCTCTGAGTCGCTCAGATCTGACAGGTCACTGTaGGTGCTGGAGTCCGAATCCTGTCTGCAAGCCAAGCTTCGCTCA +
Preference number: 6 (lower is better)
Translates to: ACSCSSESLRSDRSL*VLESESCLQAKLRS
Trigger: TGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGTCAGATCTGAGCGACTCAGAGGAGCAGCTGCAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp CTTCTGCTAGGGAGGAAGAGGGGATCCACAGGTTCATaGCATCCGGGTCACTCTGCTGGGGGCTCAGAAATC +
Preference number: 6 (lower is better)
Translates to: LLLGRKRGSTGS*HPGHSAGGSEI
Trigger: GATTTCTGAGCCCCCAGCAGAGTGACCCGGATGCCATGAACCTGTGGATCCCCTCTTCCTCCCTAGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp ACATTCAGCCCCATCGCCATCTCCTTCACCTCCTTCTaGGTGTCGGTCAGGTTGCAGGACCGCTTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: TFSPIAISFTSF*VSVRLQDRFEG
Trigger: TCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCAGAAGGAGGTGAAGGAGATGGCGATGGGGCTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp CTGCCAAAGACGGTACTGAAGGTTTTGAGGAGCGGATaGTCCTGCTGGCCAGGCCCCACAGTTGGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: LPKTVLKVLRSG*SCWPGPTVGLS
Trigger: AGAGAGGCCAACTGTGGGGCCTGGCCAGCAGGACAATCCGCTCCTCAAAACCTTCAGTACCGTCTTTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp CTCAGATCTGCCGTCAGTGCCAGCACCTTTGGGAACTaGGTCTGGCTCTGGATTTGTGACCGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LRSAVSASTFGN*VWLWICDRCSS
Trigger: GGAGCTGCAGCGGTCACAAATCCAGAGCCAGACCAAGTTCCCAAAGGTGCTGGCACTGACGGCAGATCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp AGGGGCTCCTCAGATCTGCCGTCAGTGCCAGCACCTTaGGGAACTTGGTCTGGCTCTGGATTTGTGACCGCT +
Preference number: 6 (lower is better)
Translates to: RGSSDLPSVPAP*GTWSGSGFVTA
Trigger: AGCGGTCACAAATCCAGAGCCAGACCAAGTTCCCAAAGGTGCTGGCACTGACGGCAGATCTGAGGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp CTGACGGCTCACAACACCACAGAGCCATACTTCCTCTCCTTCGGGTaGGTAGACCTTGACTCTGTGGCCCTGGACACTATAGGGACCTCG +
Preference number: 6 (lower is better)
Translates to: LTAHNTTEPYFLSFG*VDLDSVALDTIGTS
Trigger: CGAGGTCCCTATAGTGTCCAGGGCCACAGAGTCAAGGTCTACCAACCCGAAGGAGAGGAAGTATGGCTCTGTGGTGTTGTGAGCCGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS TCA 72 bp CCAAAGGTGTCTGACCTGTGGCTGAAGCATACGGAGTaGAAGGGACGGGCGTATCCCCACCTACAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: PKVSDLWLKHTE*KGRAYPHLQAH
Trigger: ATGAGCCTGTAGGTGGGGATACGCCCGTCCCTTTCACTCCGTATGCTTCAGCCACAGGTCAGACACCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS CCA 72 bp CACTTTTCGGTCCACAGAGCTGCCGGCCTTGGGACCTaGCTGAGTATCTGCTCCGAGAACAGATCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: HFSVHRAAGLGT*LSICSENRSAF
Trigger: AAAGGCAGATCTGTTCTCGGAGCAGATACTCAGCCAGGTCCCAAGGCCGGCAGCTCTGTGGACCGAAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp TGTGCCAGGGATGATCTGGGTGGGCATGAGGTTTTCTaGTTCGTGGGACTGCCCCTTTGCACACTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: CARDDLGGHEVF*FVGLPLCTLQP
Trigger: TGGCTGAAGTGTGCAAAGGGGCAGTCCCACGAACCAGAAAACCTCATGCCCACCCAGATCATCCCTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp ACCGCAGGGACCCTGCATCTTTCGTTTCTTCTTTCGCCTTCTGAGTaGCTAAGTCGGCCAACCAATGCAGAGCAGAGGAAGGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: TAGTLHLSFLLSPSE*LSRPTNAEQRKEGL
Trigger: CAGCCCCTCCTTCCTCTGCTCTGCATTGGTTGGCCGACTTAGCAACTCAGAAGGCGAAAGAAGAAACGAAAGATGCAGGGTCCCTGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp GAGCCTTCCAGCAGAAGCGCAAGCACGTCTTCAGCGTaGACCTTAACCCAGGAGTGCTGCTTCCAGTTACAG +
Preference number: 6 (lower is better)
Translates to: EPSSRSASTSSA*TLTQECCFQLQ
Trigger: CTGTAACTGGAAGCAGCACTCCTGGGTTAAGGTTCACGCTGAAGACGTGCTTGCGCTTCTGCTGGAAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS TCA 72 bp CTCTGGATTTGTGACCGCTGCAGCTCCGCCTCCGCTTaGGAAGGTAGTTTCGTTTCCAGAAGAGGCACTAGG +
Preference number: 6 (lower is better)
Translates to: LWICDRCSSASA*EGSFVSRRGTR
Trigger: CCTAGTGCCTCTTCTGGAAACGAAACTACCTTCTCAAGCGGAGGCGGAGCTGCAGCGGTCACAAATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp CCTCTGAGTCGCTCAGATCTGACAGGTCACTGTTGGTaGTGGAGTCCGAATCCTGTCTGCAAGCCAAGCTTC +
Preference number: 6 (lower is better)
Translates to: PLSRSDLTGHCW*WSPNPVCKPSF
Trigger: GAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGTCAGATCTGAGCGACTCAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp ATGCAGGAGCCGTCCTGCAGGAAGGGCTCTCCAGACTaGTTCAGCTTCCTTACTTTACTCACGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: MQEPSCRKGSPD*FSFLTLLTSFS
Trigger: GCTGAAGGACGTGAGTAAAGTAAGGAAGCTGAAGCAGTCTGGAGAGCCCTTCCTGCAGGACGGCTCCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp CTTCTGCTTTTAGGGGCTCCTCAGATCTGCCGTCAGTaGCAGCACCTTTGGGAACTTGGTCTGGCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: LLLLGAPQICRQ*QHLWELGLALD
Trigger: ATCCAGAGCCAGACCAAGTTCCCAAAGGTGCTGGCACTGACGGCAGATCTGAGGAGCCCCTAAAAGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp ACGCAGAACCTTCTGCTTTTAGGGGCTCCTCAGATCTaGCGTCAGTGCCAGCACCTTTGGGAACTTGGTCTG +
Preference number: 6 (lower is better)
Translates to: TQNLLLLGAPQI*RQCQHLWELGL
Trigger: CAGACCAAGTTCCCAAAGGTGCTGGCACTGACGGCAGATCTGAGGAGCCCCTAAAAGCAGAAGGTTCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp GCGGTAGTGACTACAGCTGCTGAAGCCACCATGCCCTaGCTAACTTGTTCCAGCGTTTTTCCCGCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: AVVTTAAEATMP*LTCSSVFPASL
Trigger: CAAAGAGGCGGGAAAAACGCTGGAACAAGTTAGCCAGGGCATGGTGGCTTCAGCAGCTGTAGTCACTACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS CCA 72 bp CGGAAGATCTTCCAGTTATTTTTGTTGCTGGGGTCATaGAGACACAGAAGGCGCCCGTCGCAGAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RKIFQLFLLLGS*RHRRRPSQSQE
Trigger: CTCCTGGCTCTGCGACGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAAAAATAACTGGAAGATCTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GCCATCTCCTTCACCTCCTTCTGGGTGTCGGTCAGGTaGCAGGACCGCTTTGAGGGATCTGAGGTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: AISFTSFWVSVR*QDRFEGSEVFL
Trigger: CAAGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCAGAAGGAGGTGAAGGAGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp GCAGTAGAGTTGAATGAGTCCAGCCCAAAGGGTGAATaGGACTCCTTATTGAGCACCGACCGCAGGGACCCT +
Preference number: 6 (lower is better)
Translates to: AVELNESSPKGE*DSLLSTDRRDP
Trigger: AGGGTCCCTGCGGTCGGTGCTCAATAAGGAGTCTCATTCACCCTTTGGGCTGGACTCATTCAACTCTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp ATCTGGGTGGGCATGAGGTTTTCTGGTTCGTGGGACTaGCCCTTTGCACACTTCAGCCAGGAGAAAACTTCC +
Preference number: 6 (lower is better)
Translates to: IWVGMRFSGSWD*PFAHFSQEKTS
Trigger: GGAAGTTTTCTCCTGGCTGAAGTGTGCAAAGGGGCAGTCCCACGAACCAGAAAACCTCATGCCCACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp CCATCTCCTTCACCTCCTTCTGGGTGTCGGTCAGGTTaGAGGACCGCTTTGAGGGATCTGAGGTTTTCTTGT +
Preference number: 6 (lower is better)
Translates to: PSPSPPSGCRSG*RTALRDLRFSC
Trigger: ACAAGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCAGAAGGAGGTGAAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp TCACTCTGTGGTGTCGAGCTGTCCATCAGCATCACGTaGGTGAGTCTGGGATCTACTGACTTGACCTCACCA +
Preference number: 6 (lower is better)
Translates to: SLCGVELSISIT*VSLGSTDLTSP
Trigger: TGGTGAGGTCAAGTCAGTAGATCCCAGACTCACCCACGTGATGCTGATGGACAGCTCGACACCACAGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CCA 72 bp ATAGCACAATTCCTGCAGTTCACCAAGTCCACGTCCTaGTCTCCAAACTCCTGGCTGAAGGCTTCCGGCTTC +
Preference number: 6 (lower is better)
Translates to: IAQFLQFTKSTS*SPNSWLKASGF
Trigger: GAAGCCGGAAGCCTTCAGCCAGGAGTTTGGAGACCAGGACGTGGACTTGGTGAACTGCAGGAATTGTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GTGTCGGTCAGGTTGCAGGACCGCTTTGAGGGATCTGAGGTTTTCTaGTTTTCTACCACTGAGGCGATGATGTGGTCGAGGAAGTCGGGT +
Preference number: 6 (lower is better)
Translates to: VSVRLQDRFEGSEVF*FSTTEAMMWSRKSG
Trigger: ACCCGACTTCCTCGACCACATCATCGCCTCAGTGGTAGAAAACAAGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACCTGACCGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp CCATTTCTTCTGTCTCACTCCTTGGACGGCTTTTCCTaGGCCGGTAACAGTCAAGGCAGACCCCAAATCCAC +
Preference number: 6 (lower is better)
Translates to: PFLLSHSLDGFS*AGNSQGRPQIH
Trigger: GTGGATTTGGGGTCTGCCTTGACTGTTACCGGCTCAGGAAAAGCCGTCCAAGGAGTGAGACAGAAGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp ATGAGTCCAGCCCAAAGGGTGAATGAGACTCCTTATTaGGCACCGACCGCAGGGACCCTGCATCTTTCGTTT +
Preference number: 6 (lower is better)
Translates to: MSPAQRVNETPY*APTAGTLHLSF
Trigger: AAACGAAAGATGCAGGGTCCCTGCGGTCGGTGCTCAATAAGGAGTCTCATTCACCCTTTGGGCTGGACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp TCCAACACTCTCGGAAGATCTTCCAGTTATTTTTGTTaGTGGGGTCATGGAGACACAGAAGGCGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: SNTLGRSSSYFC*WGHGDTEGARR
Trigger: GCGACGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAAAAATAACTGGAAGATCTTCCGAGAGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp CACAACACCACAGAGCCATACTTCCTCTCCTTCGGGTaGGTAGACCTTGACTCTGTGGCCCTGGACACTATA +
Preference number: 6 (lower is better)
Translates to: HNTTEPYFLSFG*VDLDSVALDTI
Trigger: TATAGTGTCCAGGGCCACAGAGTCAAGGTCTACCAACCCGAAGGAGAGGAAGTATGGCTCTGTGGTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CAA 72 bp GCTACAGTAGAATCATCTTGCTCCTGTTCCTTAAACTaGCGGTACCTCTCCAGGCGGCACTCTCGGCACTTG +
Preference number: 6 (lower is better)
Translates to: ATVESSCSCSLN*RYLSRRHSRHL
Trigger: CAAGTGCCGAGAGTGCCGCCTGGAGAGGTACCGCAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GCGATGATGTGGTCGAGGAAGTCGGGTAGGCTGGCTTaGCTCTTCGCTACTGCTGAGGATGAAGAGAAAACA +
Preference number: 6 (lower is better)
Translates to: AMMWSRKSGRLA*LFATAEDEEKT
Trigger: TGTTTTCTCTTCATCCTCAGCAGTAGCGAAGAGCAAAGCCAGCCTACCCGACTTCCTCGACCACATCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp CCTCCTTCTGGGTGTCGGTCAGGTTGCAGGACCGCTTaGAGGGATCTGAGGTTTTCTTGTTTTCTACCACTG +
Preference number: 6 (lower is better)
Translates to: PPSGCRSGCRTA*RDLRFSCFLPL
Trigger: CAGTGGTAGAAAACAAGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACCTGACCGACACCCAGAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp ATCTGCTCCGAGAACAGATCTGCCTTTACACAGGCCTaGAGTCAGGCTCTCGAGGCTTTGTGTGAAGGAATC +
Preference number: 6 (lower is better)
Translates to: ICSENRSAFTQA*SQALEALCEGI
Trigger: GATTCCTTCACACAAAGCCTCGAGAGCCTGACTTCAGGCCTGTGTAAAGGCAGATCTGTTCTCGGAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp AGGAAGAGCTACCTGATGCCTGAGACACAAAGCTGCTaGAAGGGCTGTGTTCCACTTTCTCCACAAACGCCA +
Preference number: 6 (lower is better)
Translates to: RKSYLMPETQSC*KGCVPLSPQTP
Trigger: TGGCGTTTGTGGAGAAAGTGGAACACAGCCCTTTCAGCAGCTTTGTGTCTCAGGCATCAGGTAGCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp AGGGACCCTGCATCTTTCGTTTCTTCTTTCGCCTTCTaGGTTGCTAAGTCGGCCAACCAATGCAGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: RDPASFVSSFAF*VAKSANQCRAE
Trigger: CTCTGCTCTGCATTGGTTGGCCGACTTAGCAACTCAGAAGGCGAAAGAAGAAACGAAAGATGCAGGGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp GATCTGAGGTTTTCTTGTTTTCTACCACTGAGGCGATaGTGTGGTCGAGGAAGTCGGGTAGGCTGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: DLRFSCFLPLRR*CGRGSRVGWLC
Trigger: GCAAAGCCAGCCTACCCGACTTCCTCGACCACATCATCGCCTCAGTGGTAGAAAACAAGAAAACCTCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS GCA 72 bp CCCCACCTACAGGCTCATCCTGTACCACCAGAGTTCTaGCGTTTTCTTTGGTGTAAGTGGCAAAGCGAATGT +
Preference number: 6 (lower is better)
Translates to: PHLQAHPVPPEF*RFLWCKWQSEC
Trigger: ACATTCGCTTTGCCACTTACACCAAAGAAAACGGCAGAACTCTGGTGGTACAGGATGAGCCTGTAGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
CDS GCA 72 bp AATTTCTTGAATTCTCTCCTGAGGCCTGCGACCAGCTaGCTTTCTGTTTTTCCGGCCCAGTCCCTGATGCAA +
Preference number: 6 (lower is better)
Translates to: NFLNSLLRPATS*LSVFPAQSLMQ
Trigger: TTGCATCAGGGACTGGGCCGGAAAAACAGAAAGGCAGCTGGTCGCAGGCCTCAGGAGAGAATTCAAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043775.9
CDS GCA 72 bp ACAGGTCACTGTTGGTGCTGGAGTCCGAATCCTGTCTaGAAGCCAAGCTTCGCTCATCCAATGAGAACCTTT +
Preference number: 6 (lower is better)
Translates to: TGHCWCWSPNPV*KPSFAHPMRTF
Trigger: AAAGGTTCTCATTGGATGAGCGAAGCTTGGCTTGCAGACAGGATTCGGACTCCAGCACCAACAGTGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp GAGGTTTTCTTGTTTTCTACCACTGAGGCGATGATGTaGTCGAGGAAGTCGGGTAGGCTGGCTTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: EVFLFSTTEAMM*SRKSGRLALLF
Trigger: GAAGAGCAAAGCCAGCCTACCCGACTTCCTCGACCACATCATCGCCTCAGTGGTAGAAAACAAGAAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp AACACTCTCGGAAGATCTTCCAGTTATTTTTGTTGCTaGGGTCATGGAGACACAGAAGGCGCCCGTCGCAGA +
Preference number: 6 (lower is better)
Translates to: NTLGRSSSYFCC*GHGDTEGARRR
Trigger: TCTGCGACGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAAAAATAACTGGAAGATCTTCCGAGAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GTGCTGAGAGCGGAGCCCAGAACACCAGATACCAGCTaGGAGGAGTCAGTTGTAATAAAGAGGGGCTTTTTC +
Preference number: 6 (lower is better)
Translates to: VLRAEPRTPDTS*EESVVIKRGFF
Trigger: GAAAAAGCCCCTCTTTATTACAACTGACTCCTCCAAGCTGGTATCTGGTGTTCTGGGCTCCGCTCTCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp AGGTTGCAGGACCGCTTTGAGGGATCTGAGGTTTTCTaGTTTTCTACCACTGAGGCGATGATGTGGTCGAGG +
Preference number: 6 (lower is better)
Translates to: RLQDRFEGSEVF*FSTTEAMMWSR
Trigger: CCTCGACCACATCATCGCCTCAGTGGTAGAAAACAAGAAAACCTCAGATCCCTCAAAGCGGTCCTGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp TTCCAACACTCTCGGAAGATCTTCCAGTTATTTTTGTaGCTGGGGTCATGGAGACACAGAAGGCGCCCGTCG +
Preference number: 6 (lower is better)
Translates to: FQHSRKIFQLFL*LGSWRHRRRPS
Trigger: CGACGGGCGCCTTCTGTGTCTCCATGACCCCAGCAACAAAAATAACTGGAAGATCTTCCGAGAGTGTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GGACTCCCAGTGCTGAGAGCGGAGCCCAGAACACCAGATACCAGCTaGGAGGAGTCAGTTGTAATAAAGAGGGGCTTTTTCTTTGCTAAA +
Preference number: 6 (lower is better)
Translates to: GLPVLRAEPRTPDTS*EESVVIKRGFFFAK
Trigger: TTTAGCAAAGAAAAAGCCCCTCTTTATTACAACTGACTCCTCCAAGCTGGTATCTGGTGTTCTGGGCTCCGCTCTCAGCACTGGGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp GTCCATCAGCATCACGTGGGTGAGTCTGGGATCTACTaGCTTGACCTCACCAGTCTCAGTTATAGACACTTC +
Preference number: 6 (lower is better)
Translates to: VHQHHVGESGIY*LDLTSLSYRHF
Trigger: GAAGTGTCTATAACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCAGACTCACCCACGTGATGCTGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CAA 72 bp ACCCTGCATCTTTCGTTTCTTCTTTCGCCTTCTGAGTaGCTAAGTCGGCCAACCAATGCAGAGCAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: TLHLSFLLSPSE*LSRPTNAEQRK
Trigger: CTTCCTCTGCTCTGCATTGGTTGGCCGACTTAGCAACTCAGAAGGCGAAAGAAGAAACGAAAGATGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp AGGAGGTCTCGAAGACTAGAACCCTCAGTTTTGCTGTaGGAGGCAGTGGGACCCAGTAACAGGCTGTTAAAA +
Preference number: 6 (lower is better)
Translates to: RRSRRLEPSVLL*EAVGPSNRLLK
Trigger: TTTTAACAGCCTGTTACTGGGTCCCACTGCCTCCAACAGCAAAACTGAGGGTTCTAGTCTTCGAGACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GAAGTGAAAGAAGCGGCAGGCTACAGTAGAATCATCTaGCTCCTGTTCCTTAAACTTGCGGTACCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: EVKEAAGYSRII*LLFLKLAVPLQ
Trigger: CTGGAGAGGTACCGCAAGTTTAAGGAACAGGAGCAAGATGATTCTACTGTAGCCTGCCGCTTCTTTCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GCACTAGGGGTTACACTGGGAAGCTGTGATATCCCATaGGTGACAGCAGGTCTCAAAACAGATTTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: ALGVTLGSCDIP*VTAGLKTDLLC
Trigger: GCAAAGCAAATCTGTTTTGAGACCTGCTGTCACCAATGGGATATCACAGCTTCCCAGTGTAACCCCTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp GGAAGCTGTGATATCCCATTGGTGACAGCAGGTCTCAAAACAGATTaGCTTTGCCGACTTATACAAGGGCAGTTAGCTTTAATCCCCCAC +
Preference number: 6 (lower is better)
Translates to: GSCDIPLVTAGLKTD*LCRLIQGQLALIPH
Trigger: GTGGGGGATTAAAGCTAACTGCCCTTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGACCTGCTGTCACCAATGGGATATCACAGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp AGCCCAAAGGCTTGTTATCTGTGGCTAAAACTCCATTaGACTGGCTCCGTCCACTTCCAAAAGTCAATGGTT +
Preference number: 6 (lower is better)
Translates to: SPKACYLWLKLH*TGSVHFQKSMV
Trigger: AACCATTGACTTTTGGAAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCACAGATAACAAGCCTTTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp ATCAGCATCACGTGGGTGAGTCTGGGATCTACTGACTaGACCTCACCAGTCTCAGTTATAGACACTTCCATA +
Preference number: 6 (lower is better)
Translates to: ISITWVSLGSTD*TSPVSVIDTSI
Trigger: TATGGAAGTGTCTATAACTGAGACTGGTGAGGTCAAGTCAGTAGATCCCAGACTCACCCACGTGATGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043775.9
ENSMUST00000224715.2
ENSMUST00000225195.2
CDS CAA 72 bp TCCGTCCACTTCCAAAAGTCAATGGTTGTGACAAACTaGAGAGAGACACTCCAAATCCAGAAGAGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: SVHFQKSMVVTN*RETLQIQKRPD
Trigger: GTCTGGCCTCTTCTGGATTTGGAGTGTCTCTCTCAAGTTTGTCACAACCATTGACTTTTGGAAGTGGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp AAGCCCAAAGGCTTGTTATCTGTGGCTAAAACTCCATaGGACTGGCTCCGTCCACTTCCAAAAGTCAATGGT +
Preference number: 6 (lower is better)
Translates to: KPKGLLSVAKTP*DWLRPLPKVNG
Trigger: ACCATTGACTTTTGGAAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCACAGATAACAAGCCTTTGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GGTAGCCTAGAAGCCAGATTGAGCCTGCCATCTCGTTaGGTATATTCTGGAAGAGGAAGATTCTCCATCAGA +
Preference number: 6 (lower is better)
Translates to: GSLEARLSLPSR*VYSGRGRFSIR
Trigger: TCTGATGGAGAATCTTCCTCTTCCAGAATATACCAAACGAGATGGCAGGCTCAATCTGGCTTCTAGGCTACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 90 bp CTGAAAGAGAAGCCCAAAGGCTTGTTATCTGTGGCTAAAACTCCATaGGACTGGCTCCGTCCACTTCCAAAAGTCAATGGTTGTGACAAA +
Preference number: 6 (lower is better)
Translates to: LKEKPKGLLSVAKTP*DWLRPLPKVNGCDK
Trigger: TTTGTCACAACCATTGACTTTTGGAAGTGGACGGAGCCAGTCCAATGGAGTTTTAGCCACAGATAACAAGCCTTTGGGCTTCTCTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS TCA 72 bp CGAATCCTGTCTGCAAGCCAAGCTTCGCTCATCCAATaGGAACCTTTTTACAGCTTCAAAAGGTGCTTTGTT +
Preference number: 6 (lower is better)
Translates to: RILSASQASLIQ*EPFYSFKRCFV
Trigger: AACAAAGCACCTTTTGAAGCTGTAAAAAGGTTCTCATTGGATGAGCGAAGCTTGGCTTGCAGACAGGATTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CCA 72 bp AGCCAGATTGAGCCTGCCATCTCGTTTGGTATATTCTaGAAGAGGAAGATTCTCCATCAGATCTTCAAACCT +
Preference number: 6 (lower is better)
Translates to: SQIEPAISFGIF*KRKILHQIFKP
Trigger: AGGTTTGAAGATCTGATGGAGAATCTTCCTCTTCCAGAATATACCAAACGAGATGGCAGGCTCAATCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2
CDS CAA 72 bp GATATCCCATTGGTGACAGCAGGTCTCAAAACAGATTaGCTTTGCCGACTTATACAAGGGCAGTTAGCTTTA +
Preference number: 6 (lower is better)
Translates to: DIPLVTAGLKTD*LCRLIQGQLAL
Trigger: TAAAGCTAACTGCCCTTGTATAAGTCGGCAAAGCAAATCTGTTTTGAGACCTGCTGTCACCAATGGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043775.9
ENSMUST00000225195.2