Pregenerated sensors for KDF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037600Ensembl transcript IDs: ENSMUST00000042919.16, ENSMUST00000105901.2, ENSMUST00000121797.2, ENSMUST00000149807.2, ENSMUST00000153811.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTaGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGT | + |
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Preference number: 1 (lower is better) Translates to: EVTASGLRGGPTQRS*FLSSAGYASSRRGR Trigger: ACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR CCA 90 bp | TACACCTGCAGCAGGGGTGCCCCTGAAGAGTCTGTGTCCGTGCCCTaGAATGATGAGTCTTGGCTGGCTGGGTACCCTGGTTGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: YTCSRGAPEESVSVP*NDESWLAGYPGWRR Trigger: CCTCCTCCAACCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTCAGGGGCACCCCTGCTGCAGGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR GCA 90 bp | AGCAGTACACCTGCAGCAGGGGTGCCCCTGAAGAGTCTGTGTCCGTaGCCTGGAATGATGAGTCTTGGCTGGCTGGGTACCCTGGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SSTPAAGVPLKSLCP*PGMMSLGWLGTLVG Trigger: TCCAACCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTCAGGGGCACCCCTGCTGCAGGTGTACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR TCA 90 bp | CCAGCTTCCACAGTTGCAGTGGGTACACAGTTGCTCGGCCACTTCTaGTCCCATCCTCACCCACCCCCAAAAGAAGCTGGAAGGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: PASTVAVGTQLLGHF*SHPHPPPKEAGRSS Trigger: AGATGACCTTCCAGCTTCTTTTGGGGGTGGGTGAGGATGGGATCAGAAGTGGCCGAGCAACTGTGTACCCACTGCAACTGTGGAAGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR GCA 90 bp | TATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATaGTGTCCCCAACCCAACCTACTTAGTCCCCATAATTGCTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: YQYSKWALPTESQRP*CPQPNLLSPHNCLG Trigger: CCCTAAGCAATTATGGGGACTAAGTAGGTTGGGTTGGGGACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR GCA 90 bp | GCCAATAATCAATATGAACTGCTTATCAATATAGCAAGTGGGCACTaGCCACAGAATCACAGAGGCCATGCTGTCCCCAACCCAACCTAC | + |
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Preference number: 1 (lower is better) Translates to: ANNQYELLINIASGH*PQNHRGHAVPNPTY Trigger: GTAGGTTGGGTTGGGGACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAGTTCATATTGATTATTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGCCCAGCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCAGAGGTCACTGCTTCTaGGCTCAGAGGCGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: EEAQPAVRPAGRGYGHHGRGHCF*AQRRPH Trigger: GTGGGGCCGCCTCTGAGCCCAGAAGCAGTGACCTCT...GCCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGCTGGGCCTCTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGAGAGGTCACTGCTTCTaGGCTCAGAGGCGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RGPGSSPPLAMLLPGEAVRGHCF*AQRRPH Trigger: GTGGGGCCGCCTCTGAGCCCAGAAGCAGTGACCTCT...CACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCATGATGAGTCTTGGCTaGCTGGGTACCCTGGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SGLRGGPTQRSWFLSSAGMMSLG*LGTLVG Trigger: TCCAACCAGGGTACCCAGCCAGCCAAGACTCATCAT...GCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGCCCACACAGAGGTCCTaGTTCCTCTCCTCCGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ATSKALLSGRRRGPASSQPTQRS*FLSSAG Trigger: GCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGG...CTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCTGGAGCAGTCAGGCCAGCTaGAAGGGGGTATGGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: WFLSSAGYASSRRGRDCWSSQAS*KGVWAP Trigger: TGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCT...CCAGCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGCTGGAAGGGGGTATaGGCACCATGGCCCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PHTEVLVPLLRWLCFFQESWKGV*APWPCE Trigger: TTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCT...CTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGGAATCACAGAGGCCATaGTGTCCCCAACCCAACCTA | + |
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Preference number: 2 (lower is better) Translates to: GPTQRSWFLSSAGYASSRESQRP*CPQPNL Trigger: TAGGTTGGGTTGGGGACAGCATGGCCTCTGTGATTC...CCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCATAGCAAGTGGGCACTaGCCACAGAATCACAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SWFLSSAGYASSRRGRDCIASGH*PQNHRG Trigger: GCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTAT...GCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGGGGGTATGGGCACCATaGCCCTGTGAAATGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: PHTEVLVPLLRWLCFFQEGVWAP*PCEMYV Trigger: CACATACATTTCACAGGGCCATGGTGCCCATACCCC...CTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAAGCTGGAAGGGGGTATaGGCACCATGGCCCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPSWKGV*APWPCE Trigger: TTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCT...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAAGCAGTCAGGCCAGCTaGAAGGGGGTATGGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: CHGSGTGKLLPRLCFQAASSQAS*KGVWAP Trigger: TGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCT...TGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGTCATGGGAGTGGAACTaGGAAGCTACTTCCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RGPGSSPPLAMLLPGEAVSWEWN*EATSKA Trigger: AGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGA...CACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCATGGCCCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGAGCAGTCAGGCCAGCTaGAAGGGGGTATGGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GHHGPVKCMWSKGIQQKQSSQAS*KGVWAP Trigger: TGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCT...CTGCTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGGGCCATGGTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAGGGGTATGGGCACCATaGCCCTGTGAAATGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: SWEWNWEATSKALLSGRRGVWAP*PCEMYV Trigger: CACATACATTTCACAGGGCCATGGTGCCCATACCCC...TCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGACCTTGCTCCTAGAGACAGCAGTAGAAATCATACAGGGAGCTCTTGTAGATTGCTCGGCCACTTCTaGTCCCATCCTCACCCACCC | + |
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Preference number: 2 (lower is better) Translates to: KDLAPRDSSRNHTGSSCRLLGHF*SHPHPP Trigger: GGGTGGGTGAGGATGGGATCAGAAGTGGCCGAGCAA...TCTACAAGAGCTCCCTGTATGATTTCTACTGCTGTCTCTAGGAGCAAGGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGGACCTTGCTCCTAGAGACAGCAGTAGAAATCATACAGGGAGCTCTTGTAAGCTGGAAGGGGGTATaGGCACCATGGCCCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VRTLLLETAVEIIQGALVSWKGV*APWPCE Trigger: TTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCT...TACAAGAGCTCCCTGTATGATTTCTACTGCTGTCTCTAGGAGCAAGGTCCTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCATATCAATATAGCAAGTaGGCACTGCCCACAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPYQYSK*ALPTES Trigger: TGATTCTGTGGGCAGTGCCCACTTGCTATATTGATA...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATGCTTCATGGGAGTGGAACTaGGAAGCTACTTCCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LLINIASGHCPQNHRGHASWEWN*EATSKA Trigger: AGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGA...AGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR CCA 72 bp | GCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTaGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: ASGLRGGPTQRS*FLSSAGYASSR Trigger: CCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR CCA 72 bp | AGCAGGGGTGCCCCTGAAGAGTCTGTGTCCGTGCCCTaGAATGATGAGTCTTGGCTGGCTGGGTACCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SRGAPEESVSVP*NDESWLAGYPG Trigger: ACCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTCAGGGGCACCCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR GCA 72 bp | CATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTaGTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: HGSGTGKLLPRL*FQAAEEAQPAV Trigger: GACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR GCA 72 bp | AGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATaGTGTCCCCAACCCAACCTACTTAGTCCCCATAAT | + |
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Preference number: 3 (lower is better) Translates to: SKWALPTESQRP*CPQPNLLSPHN Trigger: ATTATGGGGACTAAGTAGGTTGGGTTGGGGACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR GCA 72 bp | TGCTGTCCCCAACCCAACCTACTTAGTCCCCATAATTaGTTAGGGTGTCATGGGAGTGGAACTGGGAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: CCPQPNLLSPHN*LGCHGSGTGKL Trigger: TAGCTTCCCAGTTCCACTCCCATGACACCCTAAGCAATTATGGGGACTAAGTAGGTTGGGTTGGGGACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR GCA 72 bp | ATTCTAGGAACCTCAATTCAAGCCAGCTTCCACAGTTaGAGTGGGTACACAGTTGCTCGGCCACTTCTGATC | + |
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Preference number: 3 (lower is better) Translates to: ILGTSIQASFHS*SGYTVARPLLI Trigger: GATCAGAAGTGGCCGAGCAACTGTGTACCCACTGCAACTGTGGAAGCTGGCTTGAATTGAGGTTCCTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| 3UTR GCA 72 bp | CAATATGAACTGCTTATCAATATAGCAAGTGGGCACTaGCCACAGAATCACAGAGGCCATGCTGTCCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: QYELLINIASGH*PQNHRGHAVPN Trigger: GTTGGGGACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAGTTCATATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR-3UTR CAA 90 bp | AATAATCAATATGAACTGCTTATCAATATAGCAAGTGGGCACTGCCCACAGAATGCTACTTCCAAGGCTTaGCTTTCAGGCCGCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: NNQYELLINIASGHCPQNATSKA*LSGRRR Trigger: TCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGC...ATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAGTTCATATTGATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | TCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTGCGTGGAGGCCCAGATaGTGGGCGGGGCTGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: SLLLGSEAAPHRGPGSSPAWRPR*WAGLSR Trigger: CCGGGACAGCCCCGCCCATCATCTGGGCCTCCACGC...AGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | TCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCCAGCAGGGGTGCCCCTaGAGAGTCTGTGTCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGLRGGPTQRSWFLSSAGQQGCP*RVCVRA Trigger: GGCACGGACACAGACTCTTCAGGGGCACCCCTGCTG...GCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS-3UTR TCA 90 bp | CTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTTGCCCATGCTTGTCTTaGGCCTCTGGCCATCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LGSEAAPHRGPGSSPPLACPCLS*ASGHPG Trigger: GCCGGGATGGCCAGAGGCTCAAGACAAGCATGGGCA...AGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCCAGGGACTGGGGAGGTaGCATGGCGGTAGGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SGLRGGPTQRSWFLSSAGQGLGR*HGGRGR Trigger: TCTACCCCTACCGCCATGCCACCTCCCCAGTCCCTG...GCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | CAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGACTGTCAGCTCGTCCTaGCTGAGGCCAGAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QAAEEAQPAVRPAGRGYGTVSSS*LRPEPS Trigger: GCTGGGCTCTGGCCTCAGCCAGGACGAGCTGACAGT...CCCATACCCCCTTCCAGCTGGCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCTCAGCTCGTCCTGGCTaGGGCCAGAGCCCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: TASGLRGGPTQRSWFLSSSARPG*GQSPAW Trigger: CCATGCTGGGCTCTGGCCTCAGCCAGGACGAGCTGA...GGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | TCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCAGACAAGCAGGGGCTaGAGCCCCGCACACAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLLLGSEAAPHRGPGSSPQTSRG*SPAHKP Trigger: GGGCTTGTGTGCGGGGCTGCAGCCCCTGCTTGTCTG...AGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | CAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGTCGACATGGAGCCACTaGCCATCTCAGGCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QAAEEAQPAVRPAGRGYGSTWSH*PSQAGP Trigger: TGGACCTGCCTGAGATGGGCAGTGGCTCCATGTCGA...CCCATACCCCCTTCCAGCTGGCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | ACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCCTCTCTGGCCCGTGGTaGCCAGGGTCCTTAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TASGLRGGPTQRSWFLSSLSGPW*PGSLGS Trigger: AGACCCTAAGGACCCTGGCCACCACGGGCCAGAGAG...GGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GAAGAGGCCCAGCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCATACTCTCTGGCCCGTaGTGGCCAGGGTCCTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: EEAQPAVRPAGRGYGHHGILSGP*WPGSLG Trigger: CCCTAAGGACCCTGGCCACCACGGGCCAGAGAGTAT...GCCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGCTGGGCCTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GTCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCGGCCAGAGCCCAGCATaGTCTCATGGCCACTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VTASGLRGGPTQRSWFLSGQSPA*SHGHCR Trigger: CCGACAGTGGCCATGAGACCATGCTGGGCTCTGGCC...GGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | CCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCTGGGCCAGTAGGGACTGTCAGCTCGTCCTaGCTGAGGCCAGAGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPLAMLLPGEAVTAGPVGTVSSS*LRPEPS Trigger: GCTGGGCTCTGGCCTCAGCCAGGACGAGCTGACAGT...CCCTACTGGCCCAGCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTGCTGGCTGGGTACCCTaGGGCTCCATACGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAAPHRGPGSSPPLAMLLAGWVP*GSIRPQ Trigger: CTGAGGCCGTATGGAGCCCCAGGGTACCCAGCCAGC...AAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS-3UTR TCA 90 bp | GCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGATCAGCTCGTCCTGGCTaGGGCCAGAGCCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: APHRGPGSSPPLAMLLPGSARPG*GQSPAW Trigger: CCATGCTGGGCTCTGGCCTCAGCCAGGACGAGCTGA...TCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | AGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGCAGCAGGGGTGCCCCTaGAGAGTCTGTGTCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPGSSPPLAMLLPGEAVQQGCP*RVCVRA Trigger: GGCACGGACACAGACTCTTCAGGGGCACCCCTGCTG...CACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS-3UTR GCA 90 bp | TCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCCGGCCAGGGGCTCCTTaGAGCAGGAGTCCACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSAGYASSRRGRDCRPGAP*SRSPRQ Trigger: CTGACGTGGACTCCTGCTGCAAGGAGCCCCTGGCCG...GCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GGTCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCGAAGGTGATACTCTCTaGCCCGTGGTGGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHCFWAQRRPHTEVLVPLEGDTL*PVVARV Trigger: GACCCTGGCCACCACGGGCCAGAGAGTATCACCTTC...GAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GTCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCTCCCGGCTCGACATaGAGCCACTGCCCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTASGLRGGPTQRSWFLSSPGST*SHCPSQ Trigger: CTGAGATGGGCAGTGGCTCCATGTCGAGCCGGGAGA...GGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | TCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCCAGCATGGTCTCATaGCCACTGTCGGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLGSEAAPHRGPGSSPPSMVS*PLSGAA Trigger: TGCTGCCCCCGACAGTGGCCATGAGACCATGCTGGG...AGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCCCTGTGAAATGCCCAGCATGGTCTCATaGCCACTGTCGGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSQASWKGVWAPWPCEMPSMVS*PLSGAA Trigger: TGCTGCCCCCGACAGTGGCCATGAGACCATGCTGGG...CATTTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGGCCCAGCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCCTGGCGATGGCATCTaGGGTTGTCTCCTGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRGPASSQASWKGVWAPWPGDGI*GCLLGD Trigger: ATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGG...CCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGCTGGGCCTCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | TGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCGCCAGCTCGTCAATCTaGTGCACGCTGAACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFWAQRRPHTEVLVPLLRASSSI*CTLNSS Trigger: AGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGC...GCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCGGTCTGAGATCTTGCTaGTCTTCTCCAGGAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLRGGPTQRSWFLSSAGGLRSC*SSPGTR Trigger: CCGTGTTCCTGGAGAAGACCAGCAAGATCTCAGACC...GCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | CCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGCCCAGCATGGTCTCATaGCCACTGTCGGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTEVLVPLLRWLCFFQEPSMVS*PLSGAA Trigger: TGCTGCCCCCGACAGTGGCCATGAGACCATGCTGGG...CTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCGGCCAGAGCCCAGCATaGTCTCATGGCCACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSAGYASSRRGRDCGQSPA*SHGHCR Trigger: CCGACAGTGGCCATGAGACCATGCTGGGCTCTGGCC...GCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGCTGCAGGCAATCCCTaGAGCGTCGGAAGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSWFLSSAGYASSRRGRAAGNP*SVGSRR Trigger: CCTTCTGCTTCCGACGCTGCAGGGATTGCCTGCAGC...ACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCACGGCCAGGGGCTCCTTaGAGCAGGAGTCCACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPRPGAP*SRSPRQ Trigger: CTGACGTGGACTCCTGCTGCAAGGAGCCCCTGGCCG...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | TGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCAGCTCGTCAATCTGGTaGACGCTGAACAGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFWAQRRPHTEVLVPLLRSSSIW*TLNSSV Trigger: GACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCT...GCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGATACTCTCTGGCCCGTaGTGGCCAGGGTCCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLVPLLRWLCFFQERPILSGP*WPGSLG Trigger: CCCTAAGGACCCTGGCCACCACGGGCCAGAGAGTAT...CGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | AAAGCAGAAGCCAGAGAGGTCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGTCTCCCGGCTCGACATaGAGCCACTGCCCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAEAREVTASGLRGGPTQSPGST*SHCPSQ Trigger: CTGAGATGGGCAGTGGCTCCATGTCGAGCCGGGAGA...CTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGACCTCTCTGGCTTCTGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGTCTCCCGGCTCGACATaGAGCCACTGCCCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGPGSSPPLAMLLPGEAVSPGST*SHCPSQ Trigger: CTGAGATGGGCAGTGGCTCCATGTCGAGCCGGGAGA...CACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGAGGGTCCTTAGGGTCTaGCCTCCTGGTGCGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVELGSYFQGFAFRPQKRRVLRV*PPGATA Trigger: GGCCGTCGCACCAGGAGGCCAGACCCTAAGGACCCT...CCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCACTCTCTGGCCCGTGGTaGCCAGGGTCCTTAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPLSGPW*PGSLGS Trigger: AGACCCTAAGGACCCTGGCCACCACGGGCCAGAGAG...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGATACTCTCTGGCCCGTaGTGGCCAGGGTCCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSKALLSGRRRGPASSQILSGP*WPGSLG Trigger: CCCTAAGGACCCTGGCCACCACGGGCCAGAGAGTAT...CTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | CAGCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCCCTGTGAAACAATCTGGTGCACGCTaGACAGCTCTGTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPAVRPAGRGYGHHGPVKQSGAR*TALSAS Trigger: AGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTG...TTTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | CAAAAGAAGCTGGAAGGTCATCTGAAGGGCACCCAGTGTAGTTCCCACCCTCTGCGGCCAGGGGCTCCTTaGAGCAGGAGTCCACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKKLEGHLKGTQCSSHPLRPGAP*SRSPRQ Trigger: CTGACGTGGACTCCTGCTGCAAGGAGCCCCTGGCCG...CAGAGGGTGGGAACTACACTGGGTGCCCTTCAGATGACCTTCCAGCTTCTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | TACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCTCGACATGGAGCCACTaGCCATCTCAGGCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFQGFAFRPQKRPSQQSGSTWSH*PSQAGP Trigger: TGGACCTGCCTGAGATGGGCAGTGGCTCCATGTCGA...GCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | TGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCTGGACACGGTGTCCGATGTaGACTTGGCCAGCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WFLSSAGYASSRRGRDCWTRCPM*TWPARQ Trigger: TTGACGAGCTGGCCAAGTGCACATCGGACACCGTGT...CCAGCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGAAGGTGATACTCTCTaGCCCGTGGTGGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPEGDTL*PVVARV Trigger: GACCCTGGCCACCACGGGCCAGAGAGTATCACCTTC...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GCTCATCCCGGGGCTATAGCCAGGGAGAAGCCTGGCAACCCACTCTTGATGTATGAAGGTGATACTCTCTaGCCCGTGGTGGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHPGAIAREKPGNPLLMYEGDTL*PVVARV Trigger: GACCCTGGCCACCACGGGCCAGAGAGTATCACCTTC...ATACATCAAGAGTGGGTTGCCAGGCTTCTCCCTGGCTATAGCCCCGGGATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCCCTGTGAAATGGGTCTGAGATCTTGCTaGTCTTCTCCAGGAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSQASWKGVWAPWPCEMGLRSC*SSPGTR Trigger: CCGTGTTCCTGGAGAAGACCAGCAAGATCTCAGACC...CATTTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | GGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCACTGTCAGCTCGTCCTaGCTGAGGCCAGAGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCHGSGTGKLLPRLCFQATVSSS*LRPEPS Trigger: GCTGGGCTCTGGCCTCAGCCAGGACGAGCTGACAGT...GGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | AAGGACCTTGCTCCTAGAGACAGCAGTAGAAATCATACAGGGAGCTCTTGTAGAGCGTGGAGGCCCAGATaGTGGGCGGGGCTGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KDLAPRDSSRNHTGSSCRAWRPR*WAGLSR Trigger: CCGGGACAGCCCCGCCCATCATCTGGGCCTCCACGC...TCTACAAGAGCTCCCTGTATGATTTCTACTGCTGTCTCTAGGAGCAAGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | CCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGCAATCTGGTGCACGCTaGACAGCTCTGTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHTEVLVPLLRWLCFFQEQSGAR*TALSAS Trigger: AGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTG...CTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | AGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCGCTGCAGGCAATCCCTaGAGCGTCGGAAGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTGKLLPRLCFQAAEEAAAGNP*SVGSRR Trigger: CCTTCTGCTTCCGACGCTGCAGGGATTGCCTGCAGC...GGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCACCTGGCGATGGCATCTaGGGTTGTCTCCTGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPPGDGI*GCLLGD Trigger: ATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGG...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCCATGTCCGATGTGCACTTaGCCAGCTCGTCAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRLCFQAAEEAQPAVRPCPMCT*PARQSG Trigger: ACCAGATTGACGAGCTGGCCAAGTGCACATCGGACA...TGGCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCTGTCCGATGTGCACTTaGCCAGCTCGTCAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSAGYASSRRGRDCCPMCT*PARQSG Trigger: ACCAGATTGACGAGCTGGCCAAGTGCACATCGGACA...GCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAATGATGAGTCTTGGCTaGCTGGGTACCCTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGKLLPRLCFQAAEEAQPMMSLG*LGTLGL Trigger: GAGCCCCAGGGTACCCAGCCAGCCAAGACTCATCAT...TGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACCATGGCCCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGTCAGCTCGTCCTGGCTaGGGCCAGAGCCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GHHGPVKCMWSKGIQQKQSARPG*GQSPAW Trigger: CCATGCTGGGCTCTGGCCTCAGCCAGGACGAGCTGA...CTGCTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGGGCCATGGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCCCATAATTGCTTAGGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGGTCCTTAGGGTCTaGCCTCCTGGTGCGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHNCLGCHGSGTGKLLPRVLRV*PPGATA Trigger: GGCCGTCGCACCAGGAGGCCAGACCCTAAGGACCCT...TGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCCTAAGCAATTATGGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| 3UTR CAA 72 bp | TCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTaGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWEWNWEATSKA*LSGRRRGPASS Trigger: ACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCTGGTGGTTCTGCAGAGCCTaGAATGAAGGTGATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WFLSSAGYASSRRGRDCWWFCRA*NEGDTL Trigger: GAGAGTATCACCTTCATTTCAGGCTCTGCAGAACCA...CCAGCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCCTGGTTCTGCAGAGCCTaGAATGAAGGTGATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKALLSGRRRGPASSQAWFCRA*NEGDTL Trigger: GAGAGTATCACCTTCATTTCAGGCTCTGCAGAACCA...GGCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGACACGGTGTCCGATGTaGACTTGGCCAGCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVELGSYFQGFAFRPQKRTRCPM*TWPARQ Trigger: TTGACGAGCTGGCCAAGTGCACATCGGACACCGTGT...CCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAAGCTGGAAGGTCATCTGAAGGGCACCCAGTGTAGTTCCCACCCTCTGCCTGGCGATGGCATCTaGGGTTGTCTCCTGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKKLEGHLKGTQCSSHPLPGDGI*GCLLGD Trigger: ATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGG...CAGAGGGTGGGAACTACACTGGGTGCCCTTCAGATGACCTTCCAGCTTCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | CAGAATCACAGAGGCCATGCTGTCCCCAACCCAACCTACTTAGTCCCCATAATTCAGGGACTGGGGAGGTaGCATGGCGGTAGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNHRGHAVPNPTYLVPIIQGLGR*HGGRGR Trigger: TCTACCCCTACCGCCATGCCACCTCCCCAGTCCCTG...AATTATGGGGACTAAGTAGGTTGGGTTGGGGACAGCATGGCCTCTGTGATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAACCTCAATTCAAGCCAGCTTCCACAGTTGCAGTGGGTACACAGTTGCTCAGGGACTGGGGAGGTaGCATGGCGGTAGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTSIQASFHSCSGYTVAQGLGR*HGGRGR Trigger: TCTACCCCTACCGCCATGCCACCTCCCCAGTCCCTG...AGCAACTGTGTACCCACTGCAACTGTGGAAGCTGGCTTGAATTGAGGTTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATGCTGGCCAGAGCCCAGCATaGTCTCATGGCCACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLINIASGHCPQNHRGHAGQSPA*SHGHCR Trigger: CCGACAGTGGCCATGAGACCATGCTGGGCTCTGGCC...AGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCCAATCTGGTGCACGCTaGACAGCTCTGTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCHGSGTGKLLPRLCFQAQSGAR*TALSAS Trigger: AGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTG...GGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAGGGGATTCAACAAAAGCAGAAGCCAGAGAGGTCACTGCTTCTGGGCTCAGCTGCAGGCAATCCCTaGAGCGTCGGAAGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGIQQKQKPERSLLLGSAAGNP*SVGSRR Trigger: CCTTCTGCTTCCGACGCTGCAGGGATTGCCTGCAGC...TGAGCCCAGAAGCAGTGACCTCTCTGGCTTCTGCTTTTGTTGAATCCCCTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR GCA 90 bp | TATGAACTGCTTATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCAGACAAGCAGGGGCTaGAGCCCCGCACACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YELLINIASGHCPQNHRGQTSRG*SPAHKP Trigger: GGGCTTGTGTGCGGGGCTGCAGCCCCTGCTTGTCTG...GCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAGTTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGCACCATGGCCCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGAGGGTCCTTAGGGTCTaGCCTCCTGGTGCGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YGHHGPVKCMWSKGIQQKRVLRV*PPGATA Trigger: GGCCGTCGCACCAGGAGGCCAGACCCTAAGGACCCT...CTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGGGCCATGGTGCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | ATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATGCTGTCCCCGCCAGCTCGTCAATCTaGTGCACGCTGAACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: INIASGHCPQNHRGHAVPASSSI*CTLNSS Trigger: AGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGC...GGGGACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | AATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGAAGCCAGAGAGGTCACTGCGCTGGCTGGGTACCCTaGGGCTCCATACGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVCGLRGFNKSRSQRGHCAGWVP*GSIRPQ Trigger: CTGAGGCCGTATGGAGCCCCAGGGTACCCAGCCAGC...GCAGTGACCTCTCTGGCTTCTGCTTTTGTTGAATCCCCTTAGACCACATACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGAATCACAGAGGCCATGCTGTCCCCAACCCAACCTACTTAGTCCCCATATGGAATGATGAGTCTTaGCTGGCTGGGTACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQNHRGHAVPNPTYLVPIWNDES*LAGYPG Trigger: CCCAGGGTACCCAGCCAGCCAAGACTCATCATTCCA...TATGGGGACTAAGTAGGTTGGGTTGGGGACAGCATGGCCTCTGTGATTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
||
| CDS-3UTR TCA 90 bp | AATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGAAGCCAGAGAGGTCACTGCTGCCCATGCTTGTCTTaGGCCTCTGGCCATCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVCGLRGFNKSRSQRGHCCPCLS*ASGHPG Trigger: GCCGGGATGGCCAGAGGCTCAAGACAAGCATGGGCA...GCAGTGACCTCTCTGGCTTCTGCTTTTGTTGAATCCCCTTAGACCACATACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | CACCATGGCCCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGAAGTGCCCATGCTTGTCTTaGGCCTCTGGCCATCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHGPVKCMWSKGIQQKQKCPCLS*ASGHPG Trigger: GCCGGGATGGCCAGAGGCTCAAGACAAGCATGGGCA...CTTCTGCTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGGGCCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAACCTCAATTCAAGCCAGCTTCCACAGTTGCAGTGGGTACACAGTTGCTTCGACATGGAGCCACTaGCCATCTCAGGCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTSIQASFHSCSGYTVASTWSH*PSQAGP Trigger: TGGACCTGCCTGAGATGGGCAGTGGCTCCATGTCGA...AGCAACTGTGTACCCACTGCAACTGTGGAAGCTGGCTTGAATTGAGGTTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAAGCTCGTCAATCTGGTaGACGCTGAACAGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CHGSGTGKLLPRLCFQAASSSIW*TLNSSV Trigger: GACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCT...TGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | ATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATGCTGTCCCCTGTCCGATGTGCACTTaGCCAGCTCGTCAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INIASGHCPQNHRGHAVPCPMCT*PARQSG Trigger: ACCAGATTGACGAGCTGGCCAAGTGCACATCGGACA...GGGGACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CCA 90 bp | TCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAGGTCTGAGATCTTGCTaGTCTTCTCCAGGAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: SWEWNWEATSKALLSGRRGLRSC*SSPGTR Trigger: CCGTGTTCCTGGAGAAGACCAGCAAGATCTCAGACC...TCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | AGTCCCCATAATTGCTTAGGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAATGATGAGTCTTGGCTaGCTGGGTACCCTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPHNCLGCHGSGTGKLLPMMSLG*LGTLGL Trigger: GAGCCCCAGGGTACCCAGCCAGCCAAGACTCATCAT...TGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCCTAAGCAATTATGGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS-3UTR TCA 90 bp | AATAATCAATATGAACTGCTTATCAATATAGCAAGTGGGCACTGCCCACAGAATGCGTGGAGGCCCAGATaGTGGGCGGGGCTGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NNQYELLINIASGHCPQNAWRPR*WAGLSR Trigger: CCGGGACAGCCCCGCCCATCATCTGGGCCTCCACGC...ATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAGTTCATATTGATTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCCATAATTGCTTAGGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAACACGGTGTCCGATGTaGACTTGGCCAGCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPHNCLGCHGSGTGKLLPTRCPM*TWPARQ Trigger: TTGACGAGCTGGCCAAGTGCACATCGGACACCGTGT...TGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCCTAAGCAATTATGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | GGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCAAGAGTCTGTGTCCGTaGCCTGGAATGATGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCHGSGTGKLLPRLCFQAKSLCP*PGMMSL Trigger: AAGACTCATCATTCCAGGGCACGGACACAGACTCTT...GGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS-3UTR TCA 90 bp | GGGCACCATGGCCCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGGCTGCTGATCAGGTCTaGGATCTTGCTGGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHHGPVKCMWSKGIQQKQAADQV*DLAGLL Trigger: GAGAAGACCAGCAAGATCTCAGACCTGATCAGCAGC...CTGCTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGGGCCATGGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCCATAATTGCTTAGGGTGTCATGGGAGTGGAACTGGGAAGCTACTTCCAAGCTCGTCAATCTGGTaGACGCTGAACAGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPHNCLGCHGSGTGKLLPSSSIW*TLNSSV Trigger: GACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCT...TGGAAGTAGCTTCCCAGTTCCACTCCCATGACACCCTAAGCAATTATGGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGAAGCCAGAGAGGGCCAGCTCGTCAATCTaGTGCACGCTGAACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVKCMWSKGIQQKQKPERASSSI*CTLNSS Trigger: AGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGC...CCTCTCTGGCTTCTGCTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR TCA 90 bp | CACCATGGCCCTGTGAAATGTATGTGGTCTAAGGGGATTCAACAAAAGCAGAAGGCTGCTGATCAGGTCTaGGATCTTGCTGGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHGPVKCMWSKGIQQKQKAADQV*DLAGLL Trigger: GAGAAGACCAGCAAGATCTCAGACCTGATCAGCAGC...CTTCTGCTTTTGTTGAATCCCCTTAGACCACATACATTTCACAGGGCCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| 3UTR CAA 72 bp | TATTCTAGGAACCTCAATTCAAGCCAGCTTCCACAGTaGCAGTGGGTACACAGTTGCTCGGCCACTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSRNLNSSQLPQ*QWVHSCSATSD Trigger: ATCAGAAGTGGCCGAGCAACTGTGTACCCACTGCAACTGTGGAAGCTGGCTTGAATTGAGGTTCCTAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS-3UTR CCA 90 bp | AATAATCAATATGAACTGCTTATCAATATAGCAAGTGGGCACTGCCCACAGAATTGGAATGATGAGTCTTaGCTGGCTGGGTACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NNQYELLINIASGHCPQNWNDES*LAGYPG Trigger: CCCAGGGTACCCAGCCAGCCAAGACTCATCATTCCA...ATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAGCAGTTCATATTGATTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| 3UTR CAA 72 bp | ATAAACTGCAGTGTTGTGTGTAAAAGGGTAAGGACCTaGCTCCTAGAGACAGCAGTAGAAATCATACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: INCSVVCKRVRT*LLETAVEIIQG Trigger: TCCCTGTATGATTTCTACTGCTGTCTCTAGGAGCAAGGTCCTTACCCTTTTACACACAACACTGCAGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS GCA 90 bp | TCCTCAGAGCCGCGGGGGCTGTTGGTGAAGGTGCTAGGCAAGCTGTaGCGCGTGGGAGGAGGCTCGGCCAGGGGCTCCTTGCAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEPRGLLVKVLGKL*RVGGGSARGSLQQE Trigger: CTCCTGCTGCAAGGAGCCCCTGGCCGAGCCTCCTCCCACGCGGCACAGCTTGCCTAGCACCTTCACCAACAGCCCCCGCGGCTCTGAGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 |
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| CDS CCA 90 bp | GAAGGTGATACTCTCTGGCCCGTGGTGGCCAGGGTCCTTAGGGTCTaGCCTCCTGGTGCGACGGCCCGGTGGGGGCTGGGAGCGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: EGDTLWPVVARVLRV*PPGATARWGLGALI Trigger: GATGAGCGCTCCCAGCCCCCACCGGGCCGTCGCACCAGGAGGCCAGACCCTAAGGACCCTGGCCACCACGGGCCAGAGAGTATCACCTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 ENSMUST00000153811.2 |
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| CDS GCA 90 bp | GGCTGCAGCCCCGCACACAAGCCCCACAGCGCTGCAGGCAATCCCTaGAGCGTCGGAAGCAGAAGGCAGCCCTACACCAGTCCCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCSPAHKPHSAAGNP*SVGSRRQPYTSPNP Trigger: GGGGTTGGGACTGGTGTAGGGCTGCCTTCTGCTTCCGACGCTGCAGGGATTGCCTGCAGCGCTGTGGGGCTTGTGTGCGGGGCTGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 ENSMUST00000153811.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCGAGCCGCGGGGGCTGTaGGTGAAGGTGCTAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLRGGPTQRSWFLSSAGEPRGL*VKVLGK Trigger: CTTGCCTAGCACCTTCACCAACAGCCCCCGCGGCTC...GCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS CCA 90 bp | ACTGTCAGCTCGTCCTGGCTGAGGCCAGAGCCCAGCATGGTCTCATaGCCACTGTCGGGGGCAGCAGCAGGGGCAGTAGAGCGGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVSSSWLRPEPSMVS*PLSGAAAGAVERAE Trigger: CTCAGCCCGCTCTACTGCCCCTGCTGCTGCCCCCGACAGTGGCCATGAGACCATGCTGGGCTCTGGCCTCAGCCAGGACGAGCTGACAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTAGAGGAGGCAGCAGGTaGGGGGCTCGTTGGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSEAAPHRGPGSSPPLARGGSR*GARWLV Trigger: AACCAGCCAACGAGCCCCCAACCTGCTGCCTCCTCT...AGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS CCA 90 bp | AGGCTCGGCCAGGGGCTCCTTGCAGCAGGAGTCCACGTCAGGGACTaGGGAGGTGGCATGGCGGTAGGGGTAGACAGGGATGCCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGQGLLAAGVHVRD*GGGMAVGVDRDAFE Trigger: CTCAAAGGCATCCCTGTCTACCCCTACCGCCATGCCACCTCCCCAGTCCCTGACGTGGACTCCTGCTGCAAGGAGCCCCTGGCCGAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 |
||
| CDS CCA 90 bp | CACCATTGTGTTCCTTGGCCCAGGCGGCTTCGGCAGACCCTTCAATaGGGTCTCCGGCAGACAAGCAGGGGCTGCAGCCCCGCACACAAG | + |
|
Preference number: 5 (lower is better) Translates to: HHCVPWPRRLRQTLQ*GLRQTSRGCSPAHK Trigger: CTTGTGTGCGGGGCTGCAGCCCCTGCTTGTCTGCCGGAGACCCCATTGAAGGGTCTGCCGAAGCCGCCTGGGCCAAGGAACACAATGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 ENSMUST00000153811.2 |
||
| CDS-3UTR CAA 90 bp | TCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGGTCCTGGTTCCTCTCCTGCGGCCCTCGGCGTCTaGCTCATCCAGGTGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLGSEAAPHRGPGSSPAALGV*LIQVVV Trigger: GACTACCACCTGGATGAGCAAGACGCCGAGGGCCGC...AGGAGAGGAACCAGGACCTCTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCAGTCAGGCCAGCTGGAAGGGGGTATGGGCACCATGGCCCTGTGAAATGGCGGCCCTCGGCGTCTaGCTCATCCAGGTGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSQASWKGVWAPWPCEMAALGV*LIQVVV Trigger: GACTACCACCTGGATGAGCAAGACGCCGAGGGCCGC...CATTTCACAGGGCCATGGTGCCCATACCCCCTTCCAGCTGGCCTGACTGCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGAGGCCGTGACTGCTGGGCCAGTAGGGGTTAGCAGTACACCTGCAGCAGCGGCCCTCGGCGTCTaGCTCATCCAGGTGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGEAVTAGPVGVSSTPAAAALGV*LIQVVV Trigger: GACTACCACCTGGATGAGCAAGACGCCGAGGGCCGC...TGCTGCAGGTGTACTGCTAACCCCTACTGGCCCAGCAGTCACGGCCTCTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | CCCCACACAGAGGTCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGTCGGCCAGGGGCTCCTaGCAGCAGGAGTCCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PHTEVLVPLLRWLCFFQESARGS*QQESTS Trigger: TGACGTGGACTCCTGCTGCAAGGAGCCCCTGGCCGA...CTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGACCTCTGTGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | CTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCCAGAGCCGCGGGGGCTGTaGGTGAAGGTGCTAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LPRLCFQAAEEAQPAVRPEPRGL*VKVLGK Trigger: CTTGCCTAGCACCTTCACCAACAGCCCCCGCGGCTC...TGGCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CCA 90 bp | CCATACGGCCTCAGTTTCCTGGCGATGGCATCTGCGGTTGTCTCCTaGGAGATCTGGACTGTCAGCTCGTCCTGGCTGAGGCCAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PYGLSFLAMASAVVS*EIWTVSSSWLRPEP Trigger: GGGCTCTGGCCTCAGCCAGGACGAGCTGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGTTCCTCTCCTCCGCTGGCTATGCTTCTTCCAGGAGAGGCCGTGACTGCAGAGGAGGCAGCAGGTaGGGGGCTCGTTGGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: SWFLSSAGYASSRRGRDCRGGSR*GARWLV Trigger: AACCAGCCAACGAGCCCCCAACCTGCTGCCTCCTCT...GCAGTCACGGCCTCTCCTGGAAGAAGCATAGCCAGCGGAGGAGAGGAACCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAGAAGCCAGAGAGGTCACTGCTTCTGGGCTCAGAGGCGGCCCCACACAGAGAGGAGGCAGCAGGTaGGGGGCTCGTTGGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: KAEAREVTASGLRGGPTQRGGSR*GARWLV Trigger: AACCAGCCAACGAGCCCCCAACCTGCTGCCTCCTCT...CTGTGTGGGGCCGCCTCTGAGCCCAGAAGCAGTGACCTCTCTGGCTTCTGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS GCA 90 bp | GTACCCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGATGGCATCTaGGGTTGTCTCCTGGGAGATCTGGACTGTCAGCTCGTCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPWGSIRPQFPGDGI*GCLLGDLDCQLVLA Trigger: AGCCAGGACGAGCTGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS GCA 90 bp | CACACCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGATGGCATCTaGGGTTGTCTCCTGGGAGATCTGGACTGTCAGCTCGTCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTWGSIRPQFPGDGI*GCLLGDLDCQLVLA Trigger: AGCCAGGACGAGCTGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS CCA 90 bp | TGGCTGGGTACCCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGATaGCATCTGCGGTTGTCTCCTGGGAGATCTGGACTGTCAGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WLGTLGLHTASVSWR*HLRLSPGRSGLSAR Trigger: ACGAGCTGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGGTACCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CCA 90 bp | CTTGGCTGGCTGGGTACCCTGGGGCTCCATACGGCCTCAGTTTCCTaGCGATGGCATCTGCGGTTGTCTCCTGGGAGATCTGGACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGWLGTLGLHTASVS*RWHLRLSPGRSGLS Trigger: TGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGGTACCCAGCCAGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CCA 90 bp | CCCCTGAAGAGTCTGTGTCCGTGCCCTGGAATGATGAGTCTTGGCTaGCTGGGTACCCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLKSLCPCPGMMSLG*LGTLGLHTASVSWR Trigger: TCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CCA 90 bp | GGTGCCCCTGAAGAGTCTGTGTCCGTGCCCTGGAATGATGAGTCTTaGCTGGCTGGGTACCCTGGGGCTCCATACGGCCTCAGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAPEESVSVPWNDES*LAGYPGAPYGLSFL Trigger: CAGGAAACTGAGGCCGTATGGAGCCCCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTCAGGGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CCA 90 bp | TCAGGACCACACCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGATaGCATCTGCGGTTGTCTCCTGGGAGATCTGGACTGTCAGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGPHLGLHTASVSWR*HLRLSPGRSGLSAR Trigger: ACGAGCTGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGTGTGGTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | TCATGGGAGTGGAACTGGGAAGCTACTTCCAAGGCTTTGCTTTCAGGCCGCAGAGAGCCGCGGGGGCTGTaGGTGAAGGTGCTAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWEWNWEATSKALLSGRREPRGL*VKVLGK Trigger: CTTGCCTAGCACCTTCACCAACAGCCCCCGCGGCTC...TCTGCGGCCTGAAAGCAAAGCCTTGGAAGTAGCTTCCCAGTTCCACTCCCATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | CTTATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATGCTGTCTCGGCCAGGGGCTCCTaGCAGCAGGAGTCCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LINIASGHCPQNHRGHAVSARGS*QQESTS Trigger: TGACGTGGACTCCTGCTGCAAGGAGCCCCTGGCCGA...GACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | ACTTCCAAGGCTTTGCTTTCAGGCCGCAGAAGAGGCCCAGCCAGCAGTCAGGCCAGCTCTGTCAGCTTCTaGAAAATAAGCACGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: TSKALLSGRRRGPASSQASSVSF*KISTSI Trigger: GATCGACGTGCTTATTTTCAAGAAGCTGACAGAGCT...GGCCTGACTGCTGGCTGGGCCTCTTCTGCGGCCTGAAAGCAAAGCCTTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | GGAGCTCATCCCGGGGCTATAGCCAGGGAGAAGCCTGGCAACCCACTCTTGATGAGCTCTGTCAGCTTCTaGAAAATAAGCACGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GAHPGAIAREKPGNPLLMSSVSF*KISTSI Trigger: GATCGACGTGCTTATTTTCAAGAAGCTGACAGAGCT...CATCAAGAGTGGGTTGCCAGGCTTCTCCCTGGCTATAGCCCCGGGATGAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS GCA 90 bp | AGGAACACGGTGTCCGATGTGCACTTGGCCAGCTCGTCAATCTGGTaGACGCTGAACAGCTCTGTCAGCTTCTTGAAAATAAGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RNTVSDVHLASSSIW*TLNSSVSFLKISTS Trigger: CGACGTGCTTATTTTCAAGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGCCAAGTGCACATCGGACACCGTGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CCA 90 bp | TCCAGGAACACGGTGTCCGATGTGCACTTGGCCAGCTCGTCAATCTaGTGCACGCTGAACAGCTCTGTCAGCTTCTTGAAAATAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVSDVHLASSSI*CTLNSSVSFLKIST Trigger: CGTGCTTATTTTCAAGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGCCAAGTGCACATCGGACACCGTGTTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS-3UTR CAA 90 bp | CTTATCAATATAGCAAGTGGGCACTGCCCACAGAATCACAGAGGCCATGCTGTCAGCTCTGTCAGCTTCTaGAAAATAAGCACGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LINIASGHCPQNHRGHAVSSVSF*KISTSI Trigger: GATCGACGTGCTTATTTTCAAGAAGCTGACAGAGCT...GACAGCATGGCCTCTGTGATTCTGTGGGCAGTGCCCACTTGCTATATTGATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CAA 90 bp | GAGCGGGCTGAGCGCCCCTCGGAGGTCTGTGGGCGGGAGCGGCTTTaGCGGGTACTAATACGGATGATGCCCCGCACCAGGCGGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ERAERPSEVCGRERL*RVLIRMMPRTRRPS Trigger: CGAGGGCCGCCTGGTGCGGGGCATCATCCGTATTAGTACCCGCAAAAGCCGCTCCCGCCCACAGACCTCCGAGGGGCGCTCAGCCCGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CCA 72 bp | TCGTCCTGGCTGAGGCCAGAGCCCAGCATGGTCTCATaGCCACTGTCGGGGGCAGCAGCAGGGGCAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSWLRPEPSMVS*PLSGAAAGAVE Trigger: CTCTACTGCCCCTGCTGCTGCCCCCGACAGTGGCCATGAGACCATGCTGGGCTCTGGCCTCAGCCAGGACGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CAA 72 bp | GAGCGCCCCTCGGAGGTCTGTGGGCGGGAGCGGCTTTaGCGGGTACTAATACGGATGATGCCCCGCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERPSEVCGRERL*RVLIRMMPRTR Trigger: CCTGGTGCGGGGCATCATCCGTATTAGTACCCGCAAAAGCCGCTCCCGCCCACAGACCTCCGAGGGGCGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS GCA 72 bp | CCCGCACACAAGCCCCACAGCGCTGCAGGCAATCCCTaGAGCGTCGGAAGCAGAAGGCAGCCCTACACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAHKPHSAAGNP*SVGSRRQPYTS Trigger: ACTGGTGTAGGGCTGCCTTCTGCTTCCGACGCTGCAGGGATTGCCTGCAGCGCTGTGGGGCTTGTGTGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 ENSMUST00000153811.2 |
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| CDS CAA 72 bp | ACGGATGATGCCCCGCACCAGGCGGCCCTCGGCGTCTaGCTCATCCAGGTGGTAGTCCTGCGTGATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TDDAPHQAALGV*LIQVVVLRDAA Trigger: AGCAGCATCACGCAGGACTACCACCTGGATGAGCAAGACGCCGAGGGCCGCCTGGTGCGGGGCATCATCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CCA 72 bp | AGCAGGGGTGCCCCTGAAGAGTCTGTGTCCGTGCCCTaGAATGATGAGTCTTGGCTGGCTGGGTACCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRGAPEESVSVP*NDESWLAGYPG Trigger: CCCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTCAGGGGCACCCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CAA 90 bp | GGTACTAATACGGATGATGCCCCGCACCAGGCGGCCCTCGGCGTCTaGCTCATCCAGGTGGTAGTCCTGCGTGATGCTGCTGATCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTNTDDAPHQAALGV*LIQVVVLRDAADQV Trigger: GACCTGATCAGCAGCATCACGCAGGACTACCACCTGGATGAGCAAGACGCCGAGGGCCGCCTGGTGCGGGGCATCATCCGTATTAGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS TCA 72 bp | GCAGGTTGGGGGCTCGTTGGCTGGTTCTGCAGAGCCTaGAATGAAGGTGATACTCTCTGGCCCGTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGWGLVGWFCRA*NEGDTLWPVVA Trigger: GGCCACCACGGGCCAGAGAGTATCACCTTCATTTCAGGCTCTGCAGAACCAGCCAACGAGCCCCCAACCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 ENSMUST00000153811.2 |
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| CDS CCA 72 bp | ACCCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGATaGCATCTGCGGTTGTCTCCTGGGAGATCTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: TLGLHTASVSWR*HLRLSPGRSGL Trigger: CAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CCA 72 bp | GAAGAGTCTGTGTCCGTGCCCTGGAATGATGAGTCTTaGCTGGCTGGGTACCCTGGGGCTCCATACGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EESVSVPWNDES*LAGYPGAPYGL Trigger: GAGGCCGTATGGAGCCCCAGGGTACCCAGCCAGCCAAGACTCATCATTCCAGGGCACGGACACAGACTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 |
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| CDS CCA 72 bp | CACCTGGGGCTCCATACGGCCTCAGTTTCCTGGCGATaGCATCTGCGGTTGTCTCCTGGGAGATCTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: HLGLHTASVSWR*HLRLSPGRSGL Trigger: CAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCCCCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121797.2 |
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| CDS GCA 72 bp | GGCTCCATACGGCCTCAGTTTCCTGGCGATGGCATCTaGGGTTGTCTCCTGGGAGATCTGGACTGTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSIRPQFPGDGI*GCLLGDLDCQL Trigger: GAGCTGACAGTCCAGATCTCCCAGGAGACAACCGCAGATGCCATCGCCAGGAAACTGAGGCCGTATGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CAA 72 bp | CTGGTCTTCTCCAGGAACACGGTGTCCGATGTGCACTaGGCCAGCTCGTCAATCTGGTGCACGCTGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVFSRNTVSDVH*ASSSIWCTLNS Trigger: GCTGTTCAGCGTGCACCAGATTGACGAGCTGGCCAAGTGCACATCGGACACCGTGTTCCTGGAGAAGACCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CAA 90 bp | GAGATCTTGCTGGTCTTCTCCAGGAACACGGTGTCCGATGTGCACTaGGCCAGCTCGTCAATCTGGTGCACGCTGAACAGCTCTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EILLVFSRNTVSDVH*ASSSIWCTLNSSVS Trigger: GCTGACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGCCAAGTGCACATCGGACACCGTGTTCCTGGAGAAGACCAGCAAGATCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CAA 90 bp | GCCAGCTCGTCAATCTGGTGCACGCTGAACAGCTCTGTCAGCTTCTaGAAAATAAGCACGTCGATCTCCCGGCTCGACATGGAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSIWCTLNSSVSF*KISTSISRLDMEPL Trigger: CAGTGGCTCCATGTCGAGCCGGGAGATCGACGTGCTTATTTTCAAGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 |
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| CDS CCA 72 bp | ACGGTGTCCGATGTGCACTTGGCCAGCTCGTCAATCTaGTGCACGCTGAACAGCTCTGTCAGCTTCTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSDVHLASSSI*CTLNSSVSFLK Trigger: TTTCAAGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGCCAAGTGCACATCGGACACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS GCA 72 bp | GTGTCCGATGTGCACTTGGCCAGCTCGTCAATCTGGTaGACGCTGAACAGCTCTGTCAGCTTCTTGAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: VSDVHLASSSIW*TLNSSVSFLKI Trigger: TATTTTCAAGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTGACGAGCTGGCCAAGTGCACATCGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 |
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| CDS CAA 72 bp | TCAATCTGGTGCACGCTGAACAGCTCTGTCAGCTTCTaGAAAATAAGCACGTCGATCTCCCGGCTCGACATG | + |
|
Preference number: 6 (lower is better) Translates to: SIWCTLNSSVSF*KISTSISRLDM Trigger: CATGTCGAGCCGGGAGATCGACGTGCTTATTTTCAAGAAGCTGACAGAGCTGTTCAGCGTGCACCAGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042919.16 ENSMUST00000105901.2 ENSMUST00000121797.2 ENSMUST00000149807.2 |
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