Pregenerated sensors for KCTD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037653Ensembl transcript IDs: ENSMUST00000054095.6, ENSMUST00000087231.4
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGGAAACAACCACTGACAAGGAGTTTGGGTCTTAGGTTCATATaGACAATCAGAAAAGTAATTTTTGAGGGAGGCATGAGAAGATCT | + |
|
Preference number: 1 (lower is better) Translates to: CRKQPLTRSLGLRFI*TIRKVIFEGGMRRS Trigger: AGATCTTCTCATGCCTCCCTCAAAAATTACTTTTCTGATTGTTCATATGAACCTAAGACCCAAACTCCTTGTCAGTGGTTGTTTCCTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| 3UTR-3UTR CCA 90 bp | ACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTCAGCATTCTTGTCTGAATTaGTATGATATGATGCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TILTYRNTIHLHKRTTGQHSCLN*YDMMPC Trigger: ACAAGGCATCATATCATACCAATTCAGACAAGAATG...CTGACCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| 3UTR TCA 72 bp | CAACCACTGACAAGGAGTTTGGGTCTTAGGTTCATATaGACAATCAGAAAAGTAATTTTTGAGGGAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: QPLTRSLGLRFI*TIRKVIFEGGM Trigger: CATGCCTCCCTCAAAAATTACTTTTCTGATTGTTCATATGAACCTAAGACCCAAACTCCTTGTCAGTGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACCCCACGCAGCAGCAGTaGGTCGCTGCTGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDPTQQQ*VAAALG Trigger: TCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGG...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACTGCGCGCCACACGCCTaGACTTGGCATCTGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDCAPHA*TWHLPG Trigger: ACCAGGCAGATGCCAAGTTCAGGCGTGTGGCGCGCA...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCACGGACACCATCTCGCTaGTCGGGAGGATGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSRTPSR*SGGWCC Trigger: GCAGCACCATCCTCCCGATCAGCGAGATGGTGTCCG...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCACACGGTAGCCCAGGGTaGGGAACCCAGAGCGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSHGSPG*GTQSAC Trigger: ACAAGCGCTCTGGGTTCCTCACCCTGGGCTACCGTG...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACCGTCTCGGTACTGGTTaGCAAAGGCGGCAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDRLGTG*QRRQCQ Trigger: CTGGCACTGCCGCCTTTGTCAACCAGTACCGAGACG...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACTGCTGTCCGGGACGCTaGGTAACGTCGAATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDCCPGR*VTSNAW Trigger: CCAAGCATTCGACGTTACTCAGCGTCCCGGACAGCA...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACAGGGTGAGAACATGCTaGCCAGAGTGCTGTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDRVRTC*PECCPG Trigger: TCCCGGACAGCACTCTGGCCAGCATGTTCTCACCCT...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACTCTGCGCTTGTCTGGTaGTGGCATCCACTGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDSALVW*WHPLNR Trigger: CCTGTTCAGTGGATGCCACCACCAGACAAGCGCAGA...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCATCGTTGAGCGAGTTCTaGTTGGTGACCTTGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSSLSEF*LVTLGD Trigger: GTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGA...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATCGGGAGGATGGTGCTaGCGCCGCTGCCCGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRSGGWC*RRCPCP Trigger: AGGACACGGGCAGCGGCGGCAGCACCATCCTCCCGA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACTCGGGAGGATGGTGCTaGCGCCGCTGCCCGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDSGGWC*RRCPCP Trigger: AGGACACGGGCAGCGGCGGCAGCACCATCCTCCCGA...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACCCCACGCAGCAGCAGTaGGTCGCTGCTGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDPTQQQ*VAAALG Trigger: TCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGG...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | ACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTCAGACCACTGACACCATGTaGCCCAGAGCCCGAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TILTYRNTIHLHKRTTGQTTDTM*PRARGR Trigger: GCGCCCTCGGGCTCTGGGGCACATGGTGTCAGTGGT...CTGACCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACCATCCACTGAACAGGTaGTTTCCTGGAGGGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDHPLNR*FPGGSI Trigger: GATAGACCCTCCAGGAAAGCACCTGTTCAGTGGATG...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACAGAGTTCACTGTTTCTaGGCTTGTCTGGTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDRVHCF*ACLVVA Trigger: TGCCACCACCAGACAAGCGCAGAAACAGTGAACTCT...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCATGGAGGAGTTCAGATTaGCACTGGCGTTTGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSWRSSD*HWRLRS Trigger: AGAGCGCAAACGCCAGTGGCAATCTGAACTCCTCCA...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGGAGCGCCGGGAGAGCTaGACGCGGACACCATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRERRES*TRTPSR Trigger: GCGAGATGGTGTCCGCGTCCAGCTCTCCCGGCGCTC...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACGAGCGCCGGGAGAGCTaGACGCGGACACCATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDERRES*TRTPSR Trigger: GCGAGATGGTGTCCGCGTCCAGCTCTCCCGGCGCTC...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR CCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACGTAACGTCGAATGCTTaGTCACATAAACCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDVTSNA*SHKPGR Trigger: GCGGCCAGGTTTATGTGACCAAGCATTCGACGTTAC...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTGGTGCTGCCGCCGCTaGCCGTGTCCTTCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRWCCRR*PCPSEP Trigger: TGGCTCTGAAGGACACGGGCAGCGGCGGCAGCACCA...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACTGGTGCTGCCGCCGCTaGCCGTGTCCTTCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDWCCRR*PCPSEP Trigger: TGGCTCTGAAGGACACGGGCAGCGGCGGCAGCACCA...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACATTGCCACTGGCGTTTaGGCTCTGGAAAACAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDIATGV*ALENNL Trigger: CAGATTGTTTTCCAGAGCGCAAACGCCAGTGGCAAT...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCATGTCACAGCTGGATGTaGAGAGCTCATTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSCHSWM*RAHCRK Trigger: CTTCCTGCAATGAGCTCTCCACATCCAGCTGTGACA...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACGAACAGGTGCTTTCCTaGAGGGTCTATCCAAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDEQVLS*RVYPRL Trigger: TAACCTTGGATAGACCCTCCAGGAAAGCACCTGTTC...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACAGTTCAGATTGCCACTaGCGTTTGCGCTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDSSDCH*RLRSGK Trigger: TTTTCCAGAGCGCAAACGCCAGTGGCAATCTGAACT...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACATGTTCTTGCTTGGGTaGCACTATTTTCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDMFLLG*HYFLRW Trigger: CCACCTCAGAAAATAGTGTCACCCAAGCAAGAACAT...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCACACTTCCTTTGTCTGTaGCTTTGTCGCGTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSHFLCL*LCRVSC Trigger: ACAGGAAACGCGACAAAGTCACAGACAAAGGAAGTG...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATAACCACTGACACCATGTaGCCCAGAGCCCGAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRITTDTM*PRARGR Trigger: GCGCCCTCGGGCTCTGGGGCACATGGTGTCAGTGGT...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR CCA 90 bp | ACCGGCCATCAGTTAGGCGGTGACGTTGCAGTAAACACTGAATGTCATCATGACCTGGCGTTTGCGCTCTaGAAAACAATCTGGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: TGHQLGGDVAVNTECHHDLAFAL*KTIWNM Trigger: CATATTCCAGATTGTTTTCCAGAGCGCAAACGCCAG...GTCATGATGACATTCAGTGTTTACTGCAACGTCACCGCCTAACTGATGGCCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATACGGACACCATCTCGCTaGTCGGGAGGATGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRIRTPSR*SGGWCC Trigger: GCAGCACCATCCTCCCGATCAGCGAGATGGTGTCCG...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGCCGGGGACTAGAGGGTaGGAACATGCTGGCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRPGTRG*EHAGQS Trigger: ACTCTGGCCAGCATGTTCTCACCCTCTAGTCCCCGG...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | ACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTCAGACCAGGTCGGTGAGCTaGAAGAACTCTGCTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TILTYRNTIHLHKRTTGQTRSVS*KNSASR Trigger: GCGCGAAGCAGAGTTCTTTCAGCTCACCGACCTGGT...CTGACCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGAGCGAGTTCTGCTTGGTaGCCTTGGGCGACAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRASSAW*PWATAA Trigger: AGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCGC...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATACACGGTAGCCCAGGGTaGGGAACCCAGAGCGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRIHGSPG*GTQSAC Trigger: ACAAGCGCTCTGGGTTCCTCACCCTGGGCTACCGTG...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATATGCGCGCCACACGCCTaGACTTGGCATCTGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRICAPHA*TWHLPG Trigger: ACCAGGCAGATGCCAAGTTCAGGCGTGTGGCGCGCA...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGGTGTACTTCTCAGGCTaGCGGTCAGGGTCGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRVYFSG*RSGSRL Trigger: GAGTCGCGACCCTGACCGTCAGCCTGAGAAGTACAC...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | TCTTGGATGCAGCTTCTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGCGTCTCGGTACTGGTTaGCAAAGGCGGCAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWMQLLLFNAKNLDIFMQRLGTG*QRRQCQ Trigger: CTGGCACTGCCGCCTTTGTCAACCAGTACCGAGACG...CTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAGAAGCTGCATCCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATCCTTCTCGGGAAAGTaGTCGGGCAGTGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRSFSGK*SGSASC Trigger: GCAGCTGGCACTGCCCGAGCACTTTCCCGAGAAGGA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGCCCCAAAGACCTCCTTaGCCAAGGCTATGCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRPQRPP*PRLCAH Trigger: GTGGGCGCATAGCCTTGGCCAAGGAGGTCTTTGGGG...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACCCCCAAAGACCTCCTTaGCCAAGGCTATGCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDPQRPP*PRLCAH Trigger: GTGGGCGCATAGCCTTGGCCAAGGAGGTCTTTGGGG...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACTGCTGTCCGGGACGCTaGGTAACGTCGAATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDCCPGR*VTSNAW Trigger: CCAAGCATTCGACGTTACTCAGCGTCCCGGACAGCA...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATAGCGAGTTCTGCTTGGTaGCCTTGGGCGACAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRIASSAW*PWATAA Trigger: AGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCGC...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATAGTGTACTTCTCAGGCTaGCGGTCAGGGTCGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRIVYFSG*RSGSRL Trigger: GAGTCGCGACCCTGACCGTCAGCCTGAGAAGTACAC...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGGGTTGTCCTGTGGAGTaGTGGCCTCTGAGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRGCPVE*WPLSGC Trigger: ACAGCCACTCAGAGGCCAGCACTCCACAGGACAACC...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATCCTCCAGGTCGCTCTaGCAGCACTCATCGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRSSRSL*QHSSLS Trigger: GCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | TCTTGGATGCAGCTTCTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGTCCTCCAGGTCGCTCTaGCAGCACTCATCGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWMQLLLFNAKNLDIFMQSSRSL*QHSSLS Trigger: GCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGA...CTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAGAAGCTGCATCCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR CCA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATGTCCTGTGGAGTGCTaGCCTCTGAGTGGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRCPVEC*PLSGCH Trigger: GTGACAGCCACTCAGAGGCCAGCACTCCACAGGACA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGGCGCTTGTCTGGTGGTaGCATCCACTGAACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRALVWW*HPLNRC Trigger: GCACCTGTTCAGTGGATGCCACCACCAGACAAGCGC...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATAACCAGGTCGGTGAGCTaGAAGAACTCTGCTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NWKTPYNSMLLESCLYRITRSVS*KNSASR Trigger: GCGCGAAGCAGAGTTCTTTCAGCTCACCGACCTGGT...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACTCGTTGAGCGAGTTCTaGTTGGTGACCTTGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNAKNLDIFMQETTTDSLSEF*LVTLGD Trigger: GTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGA...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | ACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTCAGATGTGGAGAGCTCATTaGAGGAAGTCCCACTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TILTYRNTIHLHKRTTGQMWRAH*RKSHSH Trigger: GTGAGAGTGGGACTTCCTGCAATGAGCTCTCCACAT...CTGACCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CCA 90 bp | TCTTGGATGCAGCTTCTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGTAACGTCGAATGCTTaGTCACATAAACCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SWMQLLLFNAKNLDIFMQVTSNA*SHKPGR Trigger: GCGGCCAGGTTTATGTGACCAAGCATTCGACGTTAC...CTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAGAAGCTGCATCCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR TCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGGGTGACACTATTTTCTaGGGTGGTCGGAAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRGDTIF*GGRKKM Trigger: CATCTTCTTCCGACCACCTCAGAAAATAGTGTCACC...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR TCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGGGACTTGCTGATGAGTaGCTGAAAGAGTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRGLADE*LKEFTV Trigger: AACAGTGAACTCTTTCAGTCACTCATCAGCAAGTCC...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR GCA 90 bp | TCTTGGATGCAGCTTCTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAGCAGTTTCTCTGTaGAGTTTCTTTCCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWMQLLLFNAKNLDIFMQEAVSL*SFFPEE Trigger: TTCTTCCGGAAAGAAACTGCACAGAGAAACTGCTTC...CTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAGAAGCTGCATCCAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR GCA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGCTGTCTTCATGTTCTTaGTTGGGTGACACTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRLSSCS*LGDTIF Trigger: GAAAATAGTGTCACCCAAGCAAGAACATGAAGACAG...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS GCA 90 bp | CCCAGAGCCCGAGGGCGCGCCAGCCGCCGCCCCACGCAGCAGCAGTaGGTCGCTGCTGCCCTGGGAAACGTTGTCCTCCAGGTCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRARGRASRRPTQQQ*VAAALGNVVLQVAL Trigger: CAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGCGGCTGGCGCGCCCTCGGGCTCTGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS GCA 90 bp | CCGAGGGCGCGCCAGCCGCCGCCCCACGCAGCAGCAGTGCGTCGCTaGTGCCCTGGGAAACGTTGTCCTCCAGGTCGCTCTGGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PRARQPPPHAAAVRR*CPGKRCPPGRSGST Trigger: AGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGCGGCTGGCGCGCCCTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 90 bp | CGGCCAGCGGAGCGCCGGGAGAGCTGGACGCGGACACCATCTCGCTaGTCGGGAGGATGGTGCTGCCGCCGCTGCCCGTGTCCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPAERRESWTRTPSR*SGGWCCRRCPCPSE Trigger: CTCTGAAGGACACGGGCAGCGGCGGCAGCACCATCCTCCCGATCAGCGAGATGGTGTCCGCGTCCAGCTCTCCCGGCGCTCCGCTGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS GCA 90 bp | AGGGCGCGCCAGCCGCCGCCCCACGCAGCAGCAGTGCGTCGCTGCTaGCCTGGGAAACGTTGTCCTCCAGGTCGCTCTGGCAGCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RARQPPPHAAAVRRC*PGKRCPPGRSGSTH Trigger: ATGAGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGCGGCTGGCGCGCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 90 bp | CCTGGTTATCTCGCACCGTGGTGTAAGAGCCACGGTAGCCCAGGGTaGGGAACCCAGAGCGCTTGTCCGGAGCGCTGCCACCACCGACTA | + |
|
Preference number: 5 (lower is better) Translates to: PGYLAPWCKSHGSPG*GTQSACPERCHHRL Trigger: TAGTCGGTGGTGGCAGCGCTCCGGACAAGCGCTCTGGGTTCCTCACCCTGGGCTACCGTGGCTCTTACACCACGGTGCGAGATAACCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CCA 90 bp | AGTGCGTCGCTGCTGCCCTGGGAAACGTTGTCCTCCAGGTCGCTCTaGCAGCACTCATCGTTGAGCGAGTTCTGCTTGGTGACCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SASLLPWETLSSRSL*QHSSLSEFCLVTLG Trigger: GCCCAAGGTCACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS GCA 90 bp | TTGTCCTCCAGGTCGCTCTGGCAGCACTCATCGTTGAGCGAGTTCTaGTTGGTGACCTTGGGCGACAGCAGCTTGACCAGGTCGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSRSLWQHSSLSEF*LVTLGDSSLTRSVS Trigger: GCTCACCGACCTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 90 bp | TGCTTGGTGACCTTGGGCGACAGCAGCTTGACCAGGTCGGTGAGCTaGAAGAACTCTGCTTCGCGCAGGAGCCTCTCCTTCTCGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLVTLGDSSLTRSVS*KNSASRRSLSFSGK Trigger: CTTTCCCGAGAAGGAGAGGCTCCTGCGCGAAGCAGAGTTCTTTCAGCTCACCGACCTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS-3UTR CAA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCATGGCAGCACTCATCGTaGAGCGAGTTCTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSWQHSS*SEFCLV Trigger: CACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCA...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS TCA 90 bp | TGGAGAGCTCATTGCAGGAAGTCCCACTCTCACTTCCTTTGTCTGTaGCTTTGTCGCGTTTCCTGTCTTCATGTTCTTGCTTGGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: WRAHCRKSHSHFLCL*LCRVSCLHVLAWVT Trigger: TGTCACCCAAGCAAGAACATGAAGACAGGAAACGCGACAAAGTCACAGACAAAGGAAGTGAGAGTGGGACTTCCTGCAATGAGCTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGCTGCCCTGGGAAACGTaGTCCTCCAGGTCGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRLPWET*SSRSLW Trigger: CCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAG...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGGAAACAACCACTGACCTGCCCTGGGAAACGTaGTCCTCCAGGTCGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFNAKNLDIFMQETTTDLPWET*SSRSLW Trigger: CCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAG...GTCAGTGGTTGTTTCCTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS TCA 90 bp | GACCTTCTTTTTGGAGAGATTTGTTTCTCGGGACTTGCTGATGAGTaGCTGAAAGAGTTCACTGTTTCTGCGCTTGTCTGGTGGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DLLFGEICFSGLADE*LKEFTVSALVWWWH Trigger: ATGCCACCACCAGACAAGCGCAGAAACAGTGAACTCTTTCAGTCACTCATCAGCAAGTCCCGAGAAACAAATCTCTCCAAAAAGAAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATTCTGCTTGGTGACCTaGGGCGACAGCAGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRFCLVT*GDSSLT Trigger: GGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATTGAGCGAGTTCTGCTaGGTGACCTTGGGCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRLSEFC*VTLGDS Trigger: GCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | TCTTGGATGCAGCTTCTTCTTTTTAATGCAAAGAACTTAGACATCTTCATGCAGTTGAGCGAGTTCTGCTaGGTGACCTTGGGCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWMQLLLFNAKNLDIFMQLSEFC*VTLGDS Trigger: GCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAA...CTGCATGAAGATGTCTAAGTTCTTTGCATTAAAAAGAAGAAGCTGCATCCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR CAA 90 bp | CCACATCCACTGTTCACAAAAGGAAAGAGCAGCAAGAATTCACACCGGCCATCATCACAGACCTTCTTTTaGGAGAGATTTGTTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPLFTKGKSSKNSHRPSSQTFF*ERFVSR Trigger: CCGAGAAACAAATCTCTCCAAAAAGAAGGTCTGTGA...TGATGGCCGGTGTGAATTCTTGCTGCTCTTTCCTTTTGTGAACAGTGGATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS TCA 90 bp | GTCTGTGACTTTGTCGCGTTTCCTGTCTTCATGTTCTTGCTTGGGTaGCACTATTTTCTGAGGTGGTCGGAAGAAGATGTATTCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VCDFVAFPVFMFLLG*HYFLRWSEEDVFSV Trigger: TACACTGAATACATCTTCTTCCGACCACCTCAGAAAATAGTGTCACCCAAGCAAGAACATGAAGACAGGAAACGCGACAAAGTCACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAAACTCCATATAACTCCATGCTTTTAGAGAGTTGTCTTTACCGCATATTCTGCTTGGTGACCTaGGGCGACAGCAGCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: NWKTPYNSMLLESCLYRIFCLVT*GDSSLT Trigger: GGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAA...TATGCGGTAAAGACAACTCTCTAAAAGCATGGAGTTATATGGAGTTTTCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS-3UTR CAA 90 bp | CGTAAATTACAGAATGTCAAACATGTCCGGTCAACCACTGTTCAAAAATCAAGATCACTGTTTCTGCGCTaGTCTGGTGGTGGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RKLQNVKHVRSTTVQKSRSLFLR*SGGGIH Trigger: GTGGATGCCACCACCAGACAAGCGCAGAAACAGTGA...TCTTGATTTTTGAACAGTGGTTGACCGGACATGTTTGACATTCTGTAATTTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | TTACACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTTGGAGGAGTTCAGATaGCCACTGGCGTTTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHHLNIQKHHTSTQKNHRLEEFR*PLAFAL Trigger: GAGCGCAAACGCCAGTGGCAATCTGAACTCCTCCAA...CCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS-3UTR CAA 90 bp | ACCATCTTAACATACAGAAACACCATACATCTACACAAAAGAACCACAGGTCAGGATTGCCACTGGCGTTaGCGCTCTGGAAAACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: TILTYRNTIHLHKRTTGQDCHWR*RSGKQS Trigger: AGATTGTTTTCCAGAGCGCAAACGCCAGTGGCAATC...CTGACCTGTGGTTCTTTTGTGTAGATGTATGGTGTTTCTGTATGTTAAGATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS GCA 90 bp | ATCTACTCTCATGTGATGGATAAAATGGGAGAAGCAGTTTCTCTGTaGAGTTTCTTTCCGGAAGAAGATGTATTCAGTGTAACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IYSHVMDKMGEAVSL*SFFPEEDVFSVTAP Trigger: TGGAGCAGTTACACTGAATACATCTTCTTCCGGAAAGAAACTGCACAGAGAAACTGCTTCTCCCATTTTATCCATCACATGAGAGTAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087231.4 |
||
| CDS GCA 72 bp | CGAGGGCGCGCCAGCCGCCGCCCCACGCAGCAGCAGTaGGTCGCTGCTGCCCTGGGAAACGTTGTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGRASRRPTQQQ*VAAALGNVVLQ Trigger: CTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGCGGCTGGCGCGCCCTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 72 bp | GAGCGCCGGGAGAGCTGGACGCGGACACCATCTCGCTaGTCGGGAGGATGGTGCTGCCGCCGCTGCCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ERRESWTRTPSR*SGGWCCRRCPC Trigger: ACACGGGCAGCGGCGGCAGCACCATCCTCCCGATCAGCGAGATGGTGTCCGCGTCCAGCTCTCCCGGCGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS GCA 72 bp | CAGCCGCCGCCCCACGCAGCAGCAGTGCGTCGCTGCTaGCCTGGGAAACGTTGTCCTCCAGGTCGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QPPPHAAAVRRC*PGKRCPPGRSG Trigger: GCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGCGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS GCA 72 bp | CGCCAGCCGCCGCCCCACGCAGCAGCAGTGCGTCGCTaGTGCCCTGGGAAACGTTGTCCTCCAGGTCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQPPPHAAAVRR*CPGKRCPPGRS Trigger: AGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGCGGCTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 72 bp | GCTTGTCCGGAGCGCTGCCACCACCGACTACACCACTaGCACCATGTGCCCCAGAGCCCGAGGGCGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ACPERCHHRLHH*HHVPQSPRARQ Trigger: CTGGCGCGCCCTCGGGCTCTGGGGCACATGGTGTCAGTGGTGTAGTCGGTGGTGGCAGCGCTCCGGACAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CCA 72 bp | GCCGCCCCACGCAGCAGCAGTGCGTCGCTGCTGCCCTaGGAAACGTTGTCCTCCAGGTCGCTCTGGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AAPRSSSASLLP*ETLSSRSLWQH Trigger: GTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 72 bp | CTCGCACCGTGGTGTAAGAGCCACGGTAGCCCAGGGTaGGGAACCCAGAGCGCTTGTCCGGAGCGCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAPWCKSHGSPG*GTQSACPERCH Trigger: GTGGCAGCGCTCCGGACAAGCGCTCTGGGTTCCTCACCCTGGGCTACCGTGGCTCTTACACCACGGTGCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CAA 90 bp | GCCGCCCCACGCAGCAGCAGTGCGTCGCTGCTGCCCTGGGAAACGTaGTCCTCCAGGTCGCTCTGGCAGCACTCATCGTTGAGCGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAPRSSSASLLPWET*SSRSLWQHSSLSEF Trigger: GAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCGTGGGGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CAA 72 bp | CGCAGCAGCAGTGCGTCGCTGCTGCCCTGGGAAACGTaGTCCTCCAGGTCGCTCTGGCAGCACTCATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSASLLPWET*SSRSLWQHSSL Trigger: CAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAGCGACGCACTGCTGCTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CAA 90 bp | CCCTGGGAAACGTTGTCCTCCAGGTCGCTCTGGCAGCACTCATCGTaGAGCGAGTTCTGCTTGGTGACCTTGGGCGACAGCAGCTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: PWETLSSRSLWQHSS*SEFCLVTLGDSSLT Trigger: GGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 72 bp | ACCTTGGGCGACAGCAGCTTGACCAGGTCGGTGAGCTaGAAGAACTCTGCTTCGCGCAGGAGCCTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLGDSSLTRSVS*KNSASRRSLSF Trigger: GAAGGAGAGGCTCCTGCGCGAAGCAGAGTTCTTTCAGCTCACCGACCTGGTCAAGCTGCTGTCGCCCAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS GCA 72 bp | AGGTCGCTCTGGCAGCACTCATCGTTGAGCGAGTTCTaGTTGGTGACCTTGGGCGACAGCAGCTTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLWQHSSLSEF*LVTLGDSSLTR Trigger: CCTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CCA 72 bp | CTGCTGCCCTGGGAAACGTTGTCCTCCAGGTCGCTCTaGCAGCACTCATCGTTGAGCGAGTTCTGCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPWETLSSRSL*QHSSLSEFCLV Trigger: CACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAACGTTTCCCAGGGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CAA 72 bp | TCGCTCTGGCAGCACTCATCGTTGAGCGAGTTCTGCTaGGTGACCTTGGGCGACAGCAGCTTGACCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLWQHSSLSEFC*VTLGDSSLTRS Trigger: CGACCTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CAA 72 bp | ACGTTGTCCTCCAGGTCGCTCTGGCAGCACTCATCGTaGAGCGAGTTCTGCTTGGTGACCTTGGGCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLSSRSLWQHSS*SEFCLVTLGDS Trigger: GCTGTCGCCCAAGGTCACCAAGCAGAACTCGCTCAACGATGAGTGCTGCCAGAGCGACCTGGAGGACAACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS CCA 72 bp | GAGTGCTGGCCTCTGAGTGGCTGTCACAGCTGGATGTaGAGAGCTCATTGCAGGAAGTCCCACTCTCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ECWPLSGCHSWM*RAHCRKSHSHF Trigger: GAAGTGAGAGTGGGACTTCCTGCAATGAGCTCTCCACATCCAGCTGTGACAGCCACTCAGAGGCCAGCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS TCA 72 bp | GTGAGAACATGCTGGCCAGAGTGCTGTCCGGGACGCTaGGTAACGTCGAATGCTTGGTCACATAAACCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRTCWPECCPGR*VTSNAWSHKPG Trigger: GCCAGGTTTATGTGACCAAGCATTCGACGTTACTCAGCGTCCCGGACAGCACTCTGGCCAGCATGTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054095.6 ENSMUST00000087231.4 |
||
| CDS TCA 72 bp | TCACTGTTTCTGCGCTTGTCTGGTGGTGGCATCCACTaGACAGGTGCTTTCCTGGAGGGTCTATCCAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLFLRLSGGGIH*TGAFLEGLSKV Trigger: AACCTTGGATAGACCCTCCAGGAAAGCACCTGTTCAGTGGATGCCACCACCAGACAAGCGCAGAAACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS CCA 72 bp | CTGAAAGAGTTCACTGTTTCTGCGCTTGTCTGGTGGTaGCATCCACTGAACAGGTGCTTTCCTGGAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKEFTVSALVWW*HPLNRCFPGGS Trigger: AGACCCTCCAGGAAAGCACCTGTTCAGTGGATGCCACCACCAGACAAGCGCAGAAACAGTGAACTCTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS CAA 90 bp | AGCTCATTGCAGGAAGTCCCACTCTCACTTCCTTTGTCTGTGACTTaGTCGCGTTTCCTGTCTTCATGTTCTTGCTTGGGTGACACTATT | + |
|
Preference number: 6 (lower is better) Translates to: SSLQEVPLSLPLSVT*SRFLSSCSCLGDTI Trigger: AATAGTGTCACCCAAGCAAGAACATGAAGACAGGAAACGCGACAAAGTCACAGACAAAGGAAGTGAGAGTGGGACTTCCTGCAATGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS TCA 72 bp | CATTGCAGGAAGTCCCACTCTCACTTCCTTTGTCTGTaGCTTTGTCGCGTTTCCTGTCTTCATGTTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HCRKSHSHFLCL*LCRVSCLHVLA Trigger: AGCAAGAACATGAAGACAGGAAACGCGACAAAGTCACAGACAAAGGAAGTGAGAGTGGGACTTCCTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS TCA 72 bp | TTTGGAGAGATTTGTTTCTCGGGACTTGCTGATGAGTaGCTGAAAGAGTTCACTGTTTCTGCGCTTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FGEICFSGLADE*LKEFTVSALVW Trigger: CCAGACAAGCGCAGAAACAGTGAACTCTTTCAGTCACTCATCAGCAAGTCCCGAGAAACAAATCTCTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS TCA 72 bp | TTTGTCGCGTTTCCTGTCTTCATGTTCTTGCTTGGGTaGCACTATTTTCTGAGGTGGTCGGAAGAAGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: FVAFPVFMFLLG*HYFLRWSEEDV Trigger: TACATCTTCTTCCGACCACCTCAGAAAATAGTGTCACCCAAGCAAGAACATGAAGACAGGAAACGCGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||
| CDS CAA 72 bp | TCTTCTTCTACACTTAGCTTCTCACAGACCTTCTTTTaGGAGAGATTTGTTTCTCGGGACTTGCTGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSTLSFSQTFF*ERFVSRDLLMS Trigger: ACTCATCAGCAAGTCCCGAGAAACAAATCTCTCCAAAAAGAAGGTCTGTGAGAAGCTAAGTGTAGAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054095.6 |
||