Pregenerated sensors for KCTD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034110Ensembl transcript IDs: ENSMUST00000040616.9, ENSMUST00000144467.2, ENSMUST00000144878.3
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCATCTGTGCCTCCGCGCTCTGTCCTCTCAACTCAGCGGCTTCTaGGACAGTCAGCAGCCCCTGTGGGGATCAGACTCCCAGAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LHLCLRALSSQLSGF*DSQQPLWGSDSQSH Trigger: GTGACTCTGGGAGTCTGATCCCCACAGGGGCTGCTGACTGTCCCAGAAGCCGCTGAGTTGAGAGGACAGAGCGCGGAGGCACAGATGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CCA 90 bp | CTGTCCTCTCAACTCAGCGGCTTCTGGGACAGTCAGCAGCCCCTGTaGGGATCAGACTCCCAGAGTCACCCAAGAGGACGAACATCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LSSQLSGFWDSQQPL*GSDSQSHPRGRTSS Trigger: GGAGGATGTTCGTCCTCTTGGGTGACTCTGGGAGTCTGATCCCCACAGGGGCTGCTGACTGTCCCAGAAGCCGCTGAGTTGAGAGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR GCA 90 bp | ATTGCGTGTTTCCACGAGAGCCCAGGAGAGTCACTGCCCTCCAGCTaGCCAGAGGAATTTAGCTCAGAGCCAGAAGCCCCAGGCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: IACFHESPGESLPSS*PEEFSSEPEAPGLL Trigger: TAGAAGGCCTGGGGCTTCTGGCTCTGAGCTAAATTCCTCTGGGCAGCTGGAGGGCAGTGACTCTCCTGGGCTCTCGTGGAAACACGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR GCA 90 bp | TGTTTGCTGAGGAGAACAGAGAGAGCAGGTGTCCTGGATAATGACTaGCCCTCATCCCTGCCATCCCTGCCAGACCTCAGCCTCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: CLLRRTERAGVLDND*PSSLPSLPDLSLSV Trigger: AACAGAGAGGCTGAGGTCTGGCAGGGATGGCAGGGATGAGGGGCAGTCATTATCCAGGACACCTGCTCTCTCTGTTCTCCTCAGCAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR GCA 90 bp | CTCCCAGCGACATCCTTGCTAGATCTTGTGGCTTCCAGTGAAGACTaGCAGGCCTTGAAGAGAAAATCAGGTGAGAGCAGACCGAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LPATSLLDLVASSED*QALKRKSGESRPSP Trigger: GGGACTCGGTCTGCTCTCACCTGATTTTCTCTTCAAGGCCTGGCAGTCTTCACTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR TCA 90 bp | AGAGCCAGAAGCCCCAGGCCTTCTATCCCTCAGACTGCACCACTCTaGTCCTACAGGACTGAGCTTGGCAATGCTGTCCTTAACAATTCC | + |
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Preference number: 1 (lower is better) Translates to: RARSPRPSIPQTAPL*SYRTELGNAVLNNS Trigger: GGAATTGTTAAGGACAGCATTGCCAAGCTCAGTCCTGTAGGATCAGAGTGGTGCAGTCTGAGGGATAGAAGGCCTGGGGCTTCTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR TCA 90 bp | CACAGTGCTGGACTAAGCTTCAAGCAGGGACATCAGCACCTCAGATaGTGTGGCTGTTTGCTGAGGAGAACAGAGAGAGCAGGTGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: HSAGLSFKQGHQHLR*CGCLLRRTERAGVL Trigger: CAGGACACCTGCTCTCTCTGTTCTCCTCAGCAAACAGCCACATCATCTGAGGTGCTGATGTCCCTGCTTGAAGCTTAGTCCAGCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CCA 90 bp | GAGATACAGGCTTTCTTCTTTGGCCAGGGATACAGGGCAGATGTTTaGGCGAAACCCCTAGCTCACTCTTTATCCCGCCGGACACACATG | + |
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Preference number: 1 (lower is better) Translates to: EIQAFFFGQGYRADV*AKPLAHSLSRRTHM Trigger: CATGTGTGTCCGGCGGGATAAAGAGTGAGCTAGGGGTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGCCTGTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CCA 90 bp | GGAAGACCAAGGAGCACACTGGGAAGAGATACAGGCTTTCTTCTTTaGCCAGGGATACAGGGCAGATGTTTGGGCGAAACCCCTAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: GRPRSTLGRDTGFLL*PGIQGRCLGETPSS Trigger: TGAGCTAGGGGTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGCCTGTATCTCTTCCCAGTGTGCTCCTTGGTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR TCA 90 bp | GGGGATCTTCAGAGAGAACCTTTAGAACTTAACATTCCAGCCCTGTaGAAGGGTAACCCTGCAAAGAAGGGAGAAGCCAAAGCCCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: GDLQREPLELNIPAL*KGNPAKKGEAKAPG Trigger: CCCCGGGGCTTTGGCTTCTCCCTTCTTTGCAGGGTTACCCTTTCACAGGGCTGGAATGTTAAGTTCTAAAGGTTCTCTCTGAAGATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CCA 90 bp | GTGATGGTTCCCCTACTTACATCAGTAACAGGGAATTCCTCCCCCTaGGATGTGCTGTCTTCCAGGATAGCTCTCTTGCCCTCTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: VMVPLLTSVTGNSSP*DVLSSRIALLPSVF Trigger: GAAGACAGAGGGCAAGAGAGCTATCCTGGAAGACAGCACATCCCAGGGGGAGGAATTCCCTGTTACTGATGTAAGTAGGGGAACCATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR TCA 90 bp | GTTCCACCATGGCTGGCTTTCATGGTTGGGTATACAACAGCCAGGTaGACACACAGAGGTAGGGTATGGATGGTGATGGTTCCCCTACTT | + |
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Preference number: 1 (lower is better) Translates to: VPPWLAFMVGYTTAR*THRGRVWMVMVPLL Trigger: AAGTAGGGGAACCATCACCATCCATACCCTACCTCTGTGTGTTCACCTGGCTGTTGTATACCCAACCATGAAAGCCAGCCATGGTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR TCA 90 bp | AAACGTGTCTCCCAGGAGAAAAGATGCCCAAAGGAAAAGAGGAGGTaGACTCAAGGGTTGTGGGCGCAAGCCAGACAAGAGGTGTTGATT | + |
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Preference number: 1 (lower is better) Translates to: KRVSQEKRCPKEKRR*TQGLWAQARQEVLI Trigger: AATCAACACCTCTTGTCTGGCTTGCGCCCACAACCCTTGAGTTCACCTCCTCTTTTCCTTTGGGCATCTTTTCTCCTGGGAGACACGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CCA 90 bp | GAAATAAGGAACATCTTTGCTGAAACAAGGCCAGAGCCACAGTGCTaGACTAAGCTTCAAGCAGGGACATCAGCACCTCAGATGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: EIRNIFAETRPEPQC*TKLQAGTSAPQMMW Trigger: CCACATCATCTGAGGTGCTGATGTCCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGATGTTCCTTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR GCA 90 bp | GTTGAAATAAGGAACATCTTTGCTGAAACAAGGCCAGAGCCACAGTaGTGGACTAAGCTTCAAGCAGGGACATCAGCACCTCAGATGATG | + |
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Preference number: 1 (lower is better) Translates to: VEIRNIFAETRPEPQ*WTKLQAGTSAPQMM Trigger: CATCATCTGAGGTGCTGATGTCCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGATGTTCCTTATTTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CCA 90 bp | TGGGACATATCTTTCTACATCGTAAGACAAGGTACTGCAAGTCACTaGAAGACCAAGGAGCACACTGGGAAGAGATACAGGCTTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: WDISFYIVRQGTASH*KTKEHTGKRYRLSS Trigger: AGAAGAAAGCCTGTATCTCTTCCCAGTGTGCTCCTTGGTCTTCCAGTGACTTGCAGTACCTTGTCTTACGATGTAGAAAGATATGTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | GGACATGCCTGTGTCCCCCAGAGCCTCGGAGGTAGAGCAGGAAGGGCAAGAGTACAACTCAGCGGCTTCTaGGACAGTCAGCAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GHACVPQSLGGRAGRARVQLSGF*DSQQPL Trigger: CAGGGGCTGCTGACTGTCCCAGAAGCCGCTGAGTTG...TACTCTTGCCCTTCCTGCTCTACCTCCGAGGCTCTGGGGGACACAGGCATGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTACATCCCTGCCATCCCTaGCAGACCTCAGCCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: YPTPACSSSLELSLATMVHPCHP*QTSASL Trigger: CAGAGAGGCTGAGGTCTGGCAGGGATGGCAGGGATG...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | GGACATGCCTGTGTCCCCCAGAGCCTCGGAGGTAGAGCAGGAAGGGCAAGAGTAAGTGCAGCCTGGACATaGAATGCTCTCAGAGGAACG | + |
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Preference number: 2 (lower is better) Translates to: GHACVPQSLGGRAGRARVSAAWT*NALRGT Trigger: CGTTCCTCTGAGAGCATTGCATGTCCAGGCTGCACT...TACTCTTGCCCTTCCTGCTCTACCTCCGAGGCTCTGGGGGACACAGGCATGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTAACTGCAGCAAGCGCCTaGGCCTCTCTCTCTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: YPTPACSSSLELSLATMVTAASA*ASLSAS Trigger: AGATGCAGAGAGAGAGGCCCAGGCGCTTGCTGCAGT...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTACCAGAGCCACAGTGCTaGACTAAGCTTCAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: YPTPACSSSLELSLATMVPEPQC*TKLQAG Trigger: CCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGG...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAGCTCTCTGGACTCCCAGCGACATCCTTGCTAGATCTTGTGGCTTCCAGAGTCAGCAGCCCCTGTaGGGATCAGACTCCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SKALWTPSDILARSCGFQSQQPL*GSDSQS Trigger: ACTCTGGGAGTCTGATCCCCACAGGGGCTGCTGACT...CTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAGTCCAGAGAGCTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR TCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTAAAGACTGCCAGGCCTTaGAGAGAAAATCAGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: YPTPACSSSLELSLATMVKTARP*RENQVR Trigger: TCTCACCTGATTTTCTCTTCAAGGCCTGGCAGTCTT...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR TCA 90 bp | TGGACATACTTGGTTTTTGGTGGTGCTGAAGAGGGAACCCAGCGCCTCGTGCACAAGGCCCTGTGTTCTTaGCATCTGAGAGGGATCCTA | + |
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Preference number: 2 (lower is better) Translates to: WTYLVFGGAEEGTQRLVHKALCS*HLRGIL Trigger: TAGGATCCCTCTCAGATGTCAAGAACACAGGGCCTT...GTGCACGAGGCGCTGGGTTCCCTCTTCAGCACCACCAAAAACCAAGTATGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTAGCTTCCAGTGAAGACTaGCAGGCCTTGAAGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: YPTPACSSSLELSLATMVASSED*QALKRK Trigger: TTTTCTCTTCAAGGCCTGGCAGTCTTCACTGGAAGC...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | TTATTCAGAAGTCACCCCCAGCCACCACATTCAACAGTGCATTTCAGACTTGGCACTGCCCCTCATCCCTaGCATCCCTGCCAGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LFRSHPQPPHSTVHFRLGTAPHP*HPCQTS Trigger: TGAGGTCTGGCAGGGATGGCAGGGATGAGGGGCAGT...GCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAACAGAGAGAGCAGGTGTCCTGGATAATGACTGCCCCTCATCCCTGCCAGACCAAGGAGCACACTaGGAAGAGATACAGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RRTERAGVLDNDCPSSLPDQGAH*EEIQAF Trigger: GAAAGCCTGTATCTCTTCCCAGTGTGCTCCTTGGTC...TGGCAGGGATGAGGGGCAGTCATTATCCAGGACACCTGCTCTCTCTGTTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAACTGCCCCGGGCTTAATTGTCTGCTTTCTACCCACGTGGGCATCATCCAGCCATAGTGCAGCCTaGACATGCAATGCTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RLTAPGLIVCFLPTWASSSHSAA*TCNALR Trigger: TCTGAGAGCATTGCATGTCCAGGCTGCACTATGGCT...GGATGATGCCCACGTGGGTAGAAAGCAGACAATTAAGCCCGGGGCAGTTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAGTGTGTGCCATCTCGATCGATGAAGTACCGGCCCTCGGAGTCTGTAGGACGACTTCAGGAAACTaGAAAGGAACCACCACAGCG | + |
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Preference number: 2 (lower is better) Translates to: SKVCAISIDEVPALGVCRTTSGN*KGTTTA Trigger: CGCTGTGGTGGTTCCTTTCCAGTTTCCTGAAGTCGT...CCTACAGACTCCGAGGGCCGGTACTTCATCGATCGAGATGGCACACACTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
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| 3UTR CAA 90 bp | AGAGATACAGGCTTTCTTCTTTGGCCAGGGATACAGGGCAGATGTTaGGGCGAAACCCCTAGCTCACTCTTTATCCCGCCGGACACACAT | + |
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Preference number: 2 (lower is better) Translates to: RDTGFLLWPGIQGRC*GETPSSLFIPPDTH Trigger: ATGTGTGTCCGGCGGGATAAAGAGTGAGCTAGGGGTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGCCTGTATCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTGCTGAAACAAGGCCAGAGCCACAGTGCTGGACTAAGCTTCAAGCAGGGGTTATATCCTGTCCCTaGCTGCAGAGCAAGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: IFAETRPEPQCWTKLQAGVISCP*LQSKSP Trigger: TGGGGACTTGCTCTGCAGTCAGGGACAGGATATAAC...CCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTGTGGCTAATGGCCCAGGAGAGTCACTaGCCTCCAGCTGCCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPVSTLCFTLHCVLLWLMAQESH*PPAAQR Trigger: CCTCTGGGCAGCTGGAGGGCAGTGACTCTCCTGGGC...CATTAGCCACAGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCCCAGGCCTTCTATCCCTCAGACTGCACCACTCTGATCCTACAGGACTGGTGACAGGCATGTTCTaGGAACATGGGACATATCTT | + |
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Preference number: 2 (lower is better) Translates to: EAPGLLSLRLHHSDPTGLVTGMF*EHGTYL Trigger: AAGATATGTCCCATGTTCCCAGAACATGCCTGTCAC...CAGTCCTGTAGGATCAGAGTGGTGCAGTCTGAGGGATAGAAGGCCTGGGGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CAA 90 bp | GCATCAAGAAGGTATCAAAAGCTCTCTGGACTCCCAGCGACATCCTaGCTAGATCTTGTGGCTTCCAGTGAAGACTGCCAGGCCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ASRRYQKLSGLPATS*LDLVASSEDCQALK Trigger: CTTCAAGGCCTGGCAGTCTTCACTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAGTCCAGAGAGCTTTTGATACCTTCTTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CAA 90 bp | GCCGCAATAGAGAACAAGAGGTTCCACCATGGCTGGCTTTCATGGTaGGGTATACAACAGCCAGGTGAACACACAGAGGTAGGGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: AAIENKRFHHGWLSW*GIQQPGEHTEVGYG Trigger: TCCATACCCTACCTCTGTGTGTTCACCTGGCTGTTGTATACCCAACCATGAAAGCCAGCCATGGTGGAACCTCTTGTTCTCTATTGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACTTGGCCTTGGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAATTCTTTTCTCTCTCTGCATCTGTaGCTCCGCGCTCTGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QTWPWLLVREPKQAMNSFLSLHL*LRALSS Trigger: AGAGGACAGAGCGCGGAGGCACAGATGCAGAGAGAG...AAAAGAATTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACTTGGCCTTGGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAATTCTTTTGGCAGTGATGCTATCTaGGTCAGGGACAGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QTWPWLLVREPKQAMNSFGSDAI*VRDRQE Trigger: CTCCTGCCTGTCCCTGACGCAGATAGCATCACTGCC...AAAAGAATTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | TGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCAAAATCTTTTCCCTATCCCACCCCTGCCTaGTCCAGCAGCCTAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: CVLLWLMLHHVLLSKSFPYPTPA*SSSLEL Trigger: GAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA...GGGAAAAGATTTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACTTGGCCTTGGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAATTCTTTTCTTGTATCCCACCCCTaGCTGCTCCAGCAGCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QTWPWLLVREPKQAMNSFLVSHP*LLQQPR Trigger: TCTAGGCTGCTGGAGCAGGCAGGGGTGGGATACAAG...AAAAGAATTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTGCTGAAACAAGGCCAGAGCCACAGTGCTGGACTAAGCTTCAAGCAGGGGCACCTCAGATGATGTaGCTGTTTGCTGAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: IFAETRPEPQCWTKLQAGAPQMM*LFAEEN Trigger: GTTCTCCTCAGCAAACAGCCACATCATCTGAGGTGC...CCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CAA 90 bp | TCAGAAGTCACCCCCAGCCACCACATTCAACAGTGCATTTCAGACTaGGCCTTGGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAATTC | + |
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Preference number: 2 (lower is better) Translates to: SEVTPSHHIQQCISD*ALASRERAKTGYEF Trigger: GAATTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR CAA 90 bp | GGGAATTCCTCCCCCTGGGATGTGCTGTCTTCCAGGATAGCTCTCTaGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATT | + |
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Preference number: 2 (lower is better) Translates to: GNSSPWDVLSSRIAL*PSVFLFPLYVLLCI Trigger: AATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCAAGAGAGCTATCCTGGAAGACAGCACATCCCAGGGGGAGGAATTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | TGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCAAAATCTTTTCCCGTCCTGGATAATGACTaGCCCTCATCCCTGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: CVLLWLMLHHVLLSKSFPVLDND*PSSLPS Trigger: GGATGGCAGGGATGAGGGGCAGTCATTATCCAGGAC...GGGAAAAGATTTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR TCA 90 bp | TGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCAAAATCTTTTCCCGAAGAGAAAATCAGGTaGGAGCAGACCGAGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: CVLLWLMLHHVLLSKSFPEEKIR*EQTESP Trigger: TGGGGACTCGGTCTGCTCTCACCTGATTTTCTCTTC...GGGAAAAGATTTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACTTGGCCTTGGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAATTCTTTTAACATTCCAGCCCTGTaGAAGGGTAACCCTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QTWPWLLVREPKQAMNSFNIPAL*KGNPAK Trigger: CTTTGCAGGGTTACCCTTTCACAGGGCTGGAATGTT...AAAAGAATTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTCTGATCCTACAGGACTaGGCTTGGCAATGCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CPLSSCFHSMFYFALRSALILQD*AWQCCP Trigger: AGGACAGCATTGCCAAGCTCAGTCCTGTAGGATCAG...AGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTTCACTGCCCTCCAGCTaGCCAGAGGAATTTAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: CPLSSCFHSMFYFALRSASLPSS*PEEFSS Trigger: TGAGCTAAATTCCTCTGGGCAGCTGGAGGGCAGTGA...AGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTTCAGTCTGGGATCACACACCAATAAACTCCCCATACCCCATCTCCTGCGCCTGTTACACTCAGAGTaGGACACATGTTCAAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: HFSLGSHTNKLPIPHLLRLLHSE*DTCSKL Trigger: CAATTTTGAACATGTGTCTCACTCTGAGTGTAACAG...GCGCAGGAGATGGGGTATGGGGAGTTTATTGGTGTGTGATCCCAGACTGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTGGTACTGCAAGTCACTaGAAGACCAAGGAGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: CPLSSCFHSMFYFALRSAGTASH*KTKEHT Trigger: AGTGTGCTCCTTGGTCTTCCAGTGACTTGCAGTACC...AGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR TCA 90 bp | AACAGTATCTCCAGCAAGTCACAAAGATGGCATCTTTACCCAGCATCTTTCAACATCTCCAAGAGAAGGTaGCAGGCATGTTCTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: NSISSKSQRWHLYPASFNISKRR*QACSGN Trigger: GTTCCCAGAACATGCCTGTCACCTTCTCTTGGAGAT...GTTGAAAGATGCTGGGTAAAGATGCCATCTTTGTGACTTGCTGGAGATACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CCA 90 bp | TTATTCAGAAGTCACCCCCAGCCACCACATTCAACAGTGCATTTCAGACTTGGCCATGTTCTGGGAACATaGGACATATCTTTCTACATC | + |
|
Preference number: 2 (lower is better) Translates to: LFRSHPQPPHSTVHFRLGHVLGT*DISFYI Trigger: GATGTAGAAAGATATGTCCCATGTTCCCAGAACATG...GCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTCAGTCTGGGATCACACACCAATAAACTCCCCATACCCCATCTCCTGCGCTCTGTCTTATATTTGTaGGCTCTAATTTTCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HFSLGSHTNKLPIPHLLRSVLYL*ALIFQA Trigger: TGCTTGGAAAATTAGAGCCCACAAATATAAGACAGA...GCGCAGGAGATGGGGTATGGGGAGTTTATTGGTGTGTGATCCCAGACTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 90 bp | TCTTGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATaGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SCPLSSCFHSMFYFA*RSAVANVTPCAAIK Trigger: TTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTGTGGCTAATGAAGGTTCAAACAATGTaGGGCAGTGATGCTATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LPVSTLCFTLHCVLLWLMKVQTM*GSDAIC Trigger: GCAGATAGCATCACTGCCTCACATTGTTTGAACCTT...CATTAGCCACAGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | CAAGAGCCACGAGCCAGGGAGACTGCAGCAAGCGCCTaGGCCTCTCTCTCTGCATCTGTGCCTCCGCGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QEPRARETAASA*ASLSASVPPRS Trigger: AGAGCGCGGAGGCACAGATGCAGAGAGAGAGGCCCAGGCGCTTGCTGCAGTCTCCCTGGCTCGTGGCTCTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | CAGACCGAGTCCCCAAGAGCCACGAGCCAGGGAGACTaGAGCAAGCGCCTGGGCCTCTCTCTCTGCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QTESPRATSQGD*SKRLGLSLCIC Trigger: ACAGATGCAGAGAGAGAGGCCCAGGCGCTTGCTGCAGTCTCCCTGGCTCGTGGCTCTTGGGGACTCGGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | TGCCTCCGCGCTCTGTCCTCTCAACTCAGCGGCTTCTaGGACAGTCAGCAGCCCCTGTGGGGATCAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: CLRALSSQLSGF*DSQQPLWGSDS Trigger: GGAGTCTGATCCCCACAGGGGCTGCTGACTGTCCCAGAAGCCGCTGAGTTGAGAGGACAGAGCGCGGAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | CAACTCAGCGGCTTCTGGGACAGTCAGCAGCCCCTGTaGGGATCAGACTCCCAGAGTCACCCAAGAGGACGA | + |
|
Preference number: 3 (lower is better) Translates to: QLSGFWDSQQPL*GSDSQSHPRGR Trigger: TCGTCCTCTTGGGTGACTCTGGGAGTCTGATCCCCACAGGGGCTGCTGACTGTCCCAGAAGCCGCTGAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | TTCCACGAGAGCCCAGGAGAGTCACTGCCCTCCAGCTaGCCAGAGGAATTTAGCTCAGAGCCAGAAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FHESPGESLPSS*PEEFSSEPEAP Trigger: TGGGGCTTCTGGCTCTGAGCTAAATTCCTCTGGGCAGCTGGAGGGCAGTGACTCTCCTGGGCTCTCGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | GAGCAGGTGTCCTGGATAATGACTGCCCCTCATCCCTaGCATCCCTGCCAGACCTCAGCCTCTCTGTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: EQVSWIMTAPHP*HPCQTSASLLH Trigger: GTGTAACAGAGAGGCTGAGGTCTGGCAGGGATGGCAGGGATGAGGGGCAGTCATTATCCAGGACACCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | AGCCCCAGGCCTTCTATCCCTCAGACTGCACCACTCTaGTCCTACAGGACTGAGCTTGGCAATGCTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPRPSIPQTAPL*SYRTELGNAVL Trigger: AAGGACAGCATTGCCAAGCTCAGTCCTGTAGGATCAGAGTGGTGCAGTCTGAGGGATAGAAGGCCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | AAATTGCGTGTTTCCACGAGAGCCCAGGAGAGTCACTaGCCTCCAGCTGCCCAGAGGAATTTAGCTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KLRVSTRAQESH*PPAAQRNLAQS Trigger: GCTCTGAGCTAAATTCCTCTGGGCAGCTGGAGGGCAGTGACTCTCCTGGGCTCTCGTGGAAACACGCAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | GCTTTCTTCTTTGGCCAGGGATACAGGGCAGATGTTTaGGCGAAACCCCTAGCTCACTCTTTATCCCGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: AFFFGQGYRADV*AKPLAHSLSRR Trigger: CCGGCGGGATAAAGAGTGAGCTAGGGGTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | CAGGAAACTGGAAAGGAACCACCACAGCGTTCAGACTaGCACAGGCAGCAAGATCTGGGCTCCTCCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QETGKEPPQRSD*HRQQDLGSSKS Trigger: TGACTTGGAGGAGCCCAGATCTTGCTGCCTGTGCCAGTCTGAACGCTGTGGTGGTTCCTTTCCAGTTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
||
| 3UTR CCA 72 bp | GCCCCTCCAATGTTCAAGGGGACGACTTCAGGAAACTaGAAAGGAACCACCACAGCGTTCAGACTGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: APPMFKGTTSGN*KGTTTAFRLAQ Trigger: CTGTGCCAGTCTGAACGCTGTGGTGGTTCCTTTCCAGTTTCCTGAAGTCGTCCCCTTGAACATTGGAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
||
| 3UTR TCA 72 bp | GGACACACATGGGAAGGTTCAAACAATGTGAGGCAGTaGTGCTATCTGCGTCAGGGACAGGCAGGAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GHTWEGSNNVRQ*CYLRQGQAGAF Trigger: GAAAGCTCCTGCCTGTCCCTGACGCAGATAGCATCACTGCCTCACATTGTTTGAACCTTCCCATGTGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | AGGAGCACACTGGGAAGAGATACAGGCTTTCTTCTTTaGCCAGGGATACAGGGCAGATGTTTGGGCGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: RSTLGRDTGFLL*PGIQGRCLGET Trigger: GGTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGCCTGTATCTCTTCCCAGTGTGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTTCAGTCTGGGATCACACACCAATAAACTCCCCATACCCCATCTCCTGCGCGGCTGGCTTTCATGGTaGGGTATACAACAGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HFSLGSHTNKLPIPHLLRGWLSW*GIQQPG Trigger: ACCTGGCTGTTGTATACCCAACCATGAAAGCCAGCC...GCGCAGGAGATGGGGTATGGGGAGTTTATTGGTGTGTGATCCCAGACTGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | CCTACATATCAAGAGGGTCCGGGCTCCTTGTCTGCCTaGCTTGGGGGATCTTCAGAGAGAACCTTTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: PTYQEGPGSLSA*LGGSSERTFRT Trigger: AGTTCTAAAGGTTCTCTCTGAAGATCCCCCAAGTCAGGCAGACAAGGAGCCCGGACCCTCTTGATATGTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | GGACTAAGCTTCAAGCAGGGACATCAGCACCTCAGATaGTGTGGCTGTTTGCTGAGGAGAACAGAGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSFKQGHQHLR*CGCLLRRTERA Trigger: TGCTCTCTCTGTTCTCCTCAGCAAACAGCCACATCATCTGAGGTGCTGATGTCCCTGCTTGAAGCTTAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | AGGAACATCTTTGCTGAAACAAGGCCAGAGCCACAGTaGTGGACTAAGCTTCAAGCAGGGACATCAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: RNIFAETRPEPQ*WTKLQAGTSAP Trigger: AGGTGCTGATGTCCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGATGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | AAGCTTCAAGCAGGGACATCAGCACCTCAGATGATGTaGCTGTTTGCTGAGGAGAACAGAGAGAGCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KLQAGTSAPQMM*LFAEENRESRC Trigger: ACACCTGCTCTCTCTGTTCTCCTCAGCAAACAGCCACATCATCTGAGGTGCTGATGTCCCTGCTTGAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | AACATCTTTGCTGAAACAAGGCCAGAGCCACAGTGCTaGACTAAGCTTCAAGCAGGGACATCAGCACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NIFAETRPEPQC*TKLQAGTSAPQ Trigger: CTGAGGTGCTGATGTCCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | AGCCTAAGCCGCAATAGAGAACAAGAGGTTCCACCATaGCTGGCTTTCATGGTTGGGTATACAACAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSRNREQEVPP*LAFMVGYTTAR Trigger: CCTGGCTGTTGTATACCCAACCATGAAAGCCAGCCATGGTGGAACCTCTTGTTCTCTATTGCGGCTTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | TGGCTGGCTTTCATGGTTGGGTATACAACAGCCAGGTaGACACACAGAGGTAGGGTATGGATGGTGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WLAFMVGYTTAR*THRGRVWMVMV Trigger: AACCATCACCATCCATACCCTACCTCTGTGTGTTCACCTGGCTGTTGTATACCCAACCATGAAAGCCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | CACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTaGCACAATGGTACAAACTATATCATCCTGAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: HPCLLQQPRALS*HNGTNYIILRI Trigger: TATTCTCAGGATGATATAGTTTGTACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | TATTCAGAAGTCACCCCCAGCCACCACATTCAACAGTaGATTTCAGACTTGGCCTTGGCTTCTCGTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YSEVTPSHHIQQ*ISDLALASRER Trigger: TCTCTCACGAGAAGCCAAGGCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | GAGAGTCCAAGTAGCAAAGATACACTTGGACATACTTaGTTTTTGGTGGTGCTGAAGAGGGAACCCAGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: ESPSSKDTLGHT*FLVVLKREPSA Trigger: GGCGCTGGGTTCCCTCTTCAGCACCACCAAAAACCAAGTATGTCCAAGTGTATCTTTGCTACTTGGACTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | GCCACCACATTCAACAGTGCATTTCAGACTTGGCCTTaGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ATTFNSAFQTWP*LLVREPKQAMN Trigger: ATTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTGAAATGCACTGTTGAATGTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | ATAGAGAACAAGAGGTTCCACCATGGCTGGCTTTCATaGTTGGGTATACAACAGCCAGGTGAACACACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IENKRFHHGWLS*LGIQQPGEHTE Trigger: CTCTGTGTGTTCACCTGGCTGTTGTATACCCAACCATGAAAGCCAGCCATGGTGGAACCTCTTGTTCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CAA 90 bp | TTATTCAGAAGTCACCCCCAGCCACCACATTCAACAGTGCATTTCAGACTTGGCGGACATACTTGGTTTTaGGTGGTGCTGAAGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LFRSHPQPPHSTVHFRLGGHTWF*VVLKRE Trigger: TTCCCTCTTCAGCACCACCAAAAACCAAGTATGTCC...GCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCAAAATCTTTTCCCTCAGGGCCTGGGCAATaGCAACCGGAAAAAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: CVLLWLMLHHVLLSKSFPSGPGQ*QPEKGS Trigger: TGATCCTTTTTCCGGTTGCAATTGCCCAGGCCCTGA...GGGAAAAGATTTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCAAAATCTTTTCCCGCCAGACAAGAGGTGTaGATTGACAGGACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: CVLLWLMLHHVLLSKSFPARQEV*IDRTHT Trigger: TGTGTGTGTCCTGTCAATCAACACCTCTTGTCTGGC...GGGAAAAGATTTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | CGGCTTTGGCAGCTATGGTTAATCTCCAAGAGAAGGTaGCAGGCATGTTCTGGGAACATGGGACATATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLWQLWLISKRR*QACSGNMGHIF Trigger: AAAGATATGTCCCATGTTCCCAGAACATGCCTGTCACCTTCTCTTGGAGATTAACCATAGCTGCCAAAGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | AAAGGATCAAACAGGCCAAACTACTTCCCACAGATATaGCCCTTTTATTCAGAAGTCACCCCCAGCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: KGSNRPNYFPQI*PFYSEVTPSHH Trigger: GTGGTGGCTGGGGGTGACTTCTGAATAAAAGGGTCATATCTGTGGGAAGTAGTTTGGCCTGTTTGATCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | TCTTTCTACATCGTAAGACAAGGTACTGCAAGTCACTaGAAGACCAAGGAGCACACTGGGAAGAGATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFYIVRQGTASH*KTKEHTGKRYR Trigger: CCTGTATCTCTTCCCAGTGTGCTCCTTGGTCTTCCAGTGACTTGCAGTACCTTGTCTTACGATGTAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | TTAATTGTCTGCTTTCTACCCACGTGGGCATCATCCTaGACAGTGTACTTCACTAGCTCTCCAGACAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LIVCFLPTWASS*TVYFTSSPDSE Trigger: TTCACTGTCTGGAGAGCTAGTGAAGTACACTGTTCAGGATGATGCCCACGTGGGTAGAAAGCAGACAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR GCA 72 bp | TTTCCTCACAAGTCTTTTGATCAGGGCCTGGGCAATTaGAACCGGAAAAAGGATCAAACAGGCCAAACTACT | + |
|
Preference number: 3 (lower is better) Translates to: FPHKSFDQGLGN*NRKKDQTGQTT Trigger: AGTAGTTTGGCCTGTTTGATCCTTTTTCCGGTTGCAATTGCCCAGGCCCTGATCAAAAGACTTGTGAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | CTTTCAACCTTCAGCAAGCAGTCTGGGCCCGGTTTTTaGGCTGATACAATTTTCTGTCTTATATTTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSTFSKQSGPGF*ADTIFCLIFVG Trigger: GCCCACAAATATAAGACAGAAAATTGTATCAGCTCAAAAACCGGGCCCAGACTGCTTGCTGAAGGTTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | TCTCCAAGAGAAGGTGACAGGCATGTTCTGGGAACATaGGACATATCTTTCTACATCGTAAGACAAGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: SPREGDRHVLGT*DISFYIVRQGT Trigger: AGTACCTTGTCTTACGATGTAGAAAGATATGTCCCATGTTCCCAGAACATGCCTGTCACCTTCTCTTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR TCA 72 bp | CAAGAGGTGTTGATTGACAGGACACACACATACTTGTaGGAAGGTATTTCCTGTGAGTCAAGAAGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QEVLIDRTHTYL*EGISCESRSFS Trigger: GGAAAAGCTTCTTGACTCACAGGAAATACCTTCTCACAAGTATGTGTGTGTCCTGTCAATCAACACCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CCA 72 bp | TCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTGTaGCTAATGTTACACCATGTGCTGCTATCAAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: STLCFTLHCVLL*LMLHHVLLSKS Trigger: AGATTTTGATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCAATGCAAAGTAAAACATAGAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTACCGGCCCTCGGAGTCTGTAGGGATGTAATGCCGCCCGCTGAACATGGCAGCAGGGGCAGCCCGTaGCCCGCTTGCGTGGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVPALGVCRDVMPPAEHGSRGSP*PACVAV Trigger: TACGGCCACGCAAGCGGGGCACGGGCTGCCCCTGCT...GCCATGTTCAGCGGGCGGCATTACATCCCTACAGACTCCGAGGGCCGGTACTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTAACTGCCCCGGGCTTAATTGTCTGCTTTCTACCCACGTGGGCATCATCCATGGCACCGTCCGAGTaGCGGCTGTCTGGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLTAPGLIVCFLPTWASSMAPSE*RLSGSR Trigger: GCGGGAGCCAGACAGCCGTCACTCGGACGGTGCCAT...GGATGATGCCCACGTGGGTAGAAAGCAGACAATTAAGCCCGGGGCAGTTAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGTGTGTGCCATCTCGATCGATGAAGTACCGGCCCTCGGAGTCTGTAGGATGGCACCGTCCGAGTaGCGGCTGTCTGGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVCAISIDEVPALGVCRMAPSE*RLSGSR Trigger: GCGGGAGCCAGACAGCCGTCACTCGGACGGTGCCAT...CCTACAGACTCCGAGGGCCGGTACTTCATCGATCGAGATGGCACACACTTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
||
| CDS-3UTR TCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTACGTGAGGCCCTGGGCTaGGAGGTCAGTGACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YPTPACSSSLELSLATMVREALG*EVSDQA Trigger: TGCCTGGTCACTGACCTCTCAGCCCAGGGCCTCACG...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR GCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTATGCATGTTCTCCAGCTaGTCCAGGAGGGGCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: YPTPACSSSLELSLATMVCMFSS*SRRGPM Trigger: CATCGGGCCCCTCCTGGAGCAGCTGGAGAACATGCA...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | GGGACGACTTCAGGAAACTGGAAAGGAACCACCACAGCGTTCAGACTGGCACAGCTTCGGAGCTGGACATaGCACCGTCCGAGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTTSGNWKGTTTAFRLAQLRSWT*HRPSDG Trigger: GCCGTCACTCGGACGGTGCCATGTCCAGCTCCGAAG...CTGTGCCAGTCTGAACGCTGTGGTGGTTCCTTTCCAGTTTCCTGAAGTCGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
||
| CDS-3UTR CCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTACTTCGGCTTCGGAGCTaGACATGGCACCGTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YPTPACSSSLELSLATMVLRLRS*TWHRPS Trigger: ACTCGGACGGTGCCATGTCCAGCTCCGAAGCCGAAG...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGAACAGAGAGAGCAGGTGTCCTGGATAATGACTGCCCCTCATCCCTGCCAACTTCAGGAAACTCCTaGGGCAGCAGGGGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRTERAGVLDNDCPSSLPTSGNS*GSRGSP Trigger: CGGGCTGCCCCTGCTGCCCCAGGAGTTTCCTGAAGT...TGGCAGGGATGAGGGGCAGTCATTATCCAGGACACCTGCTCTCTCTGTTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | TATCCCACCCCTGCCTGCTCCAGCAGCCTAGAGCTCTCTCTTGCCACAATGGTACAAAGCGAAGGGAGTTaGGGAGCGGACACTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPTPACSSSLELSLATMVQSEGS*GADTHR Trigger: CCTATGAGTGTCCGCTCCTCAACTCCCTTCGCTTTG...TACCATTGTGGCAAGAGAGAGCTCTAGGCTGCTGGAGCAGGCAGGGGTGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAAGTCACCCCCAGCCACCACATTCAACAGTGCATTTCAGACTTGGCCTACTGGTGGTCCACCGTaGGGCCCTGGGCTGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQKSPPATTFNSAFQTWPTGGPP*GPGLRG Trigger: ACCTCTCAGCCCAGGGCCTCACGGTGGACCACCAGT...AGGCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCAAAGTGTGTGCCATCTCGATCGATGAAGTACCGGCCCTCGGAGTCTGTACTTCGGCTTCGGAGCTaGACATGGCACCGTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPKCVPSRSMKYRPSESVLRLRS*TWHRPS Trigger: ACTCGGACGGTGCCATGTCCAGCTCCGAAGCCGAAG...TACAGACTCCGAGGGCCGGTACTTCATCGATCGAGATGGCACACACTTTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144878.3 |
||
| CDS-3UTR CCA 90 bp | AGGTACTGCAAGTCACTGGAAGACCAAGGAGCACACTGGGAAGAGATACAGGCTCCAGGAGGGGCCCGATaGCATAGTACTGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RYCKSLEDQGAHWEEIQAPGGAR*HSTGPP Trigger: AGGAGGCCCAGTACTATGCCATCGGGCCCCTCCTGG...AGCCTGTATCTCTTCCCAGTGTGCTCCTTGGTCTTCCAGTGACTTGCAGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCCCCAGGCCTTCTATCCCTCAGACTGCACCACTCTGATCCTACAGGACTGCTTCTCGCCCTTCAGTaGCTGCATGTTCTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAPGLLSLRLHHSDPTGLLLALQ*LHVLQL Trigger: CAGCTGGAGAACATGCAGCCACTGAAGGGCGAGAAG...CAGTCCTGTAGGATCAGAGTGGTGCAGTCTGAGGGATAGAAGGCCTGGGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | CATTTCAGTCTGGGATCACACACCAATAAACTCCCCATACCCCATCTCCTGCGCTCCACCGTGAGGCCCTaGGCTGAGAGGTCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLGSHTNKLPIPHLLRSTVRP*AERSVT Trigger: GGTCACTGACCTCTCAGCCCAGGGCCTCACGGTGGA...GCGCAGGAGATGGGGTATGGGGAGTTTATTGGTGTGTGATCCCAGACTGAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGCTCTCTGGACTCCCAGCGACATCCTTGCTAGATCTTGTGGCTTCCAGCACACCCCGATACACTaGTGGTCCACCGTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKALWTPSDILARSCGFQHTPIH*WSTVRP Trigger: GGGCCTCACGGTGGACCACCAGTGTATCGGGGTGTG...CTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAGTCCAGAGAGCTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTAGCAGGGGCAGCCCGTaGCCCGCTTGCGTGGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPLSSCFHSMFYFALRSASRGSP*PACVAV Trigger: TACGGCCACGCAAGCGGGGCACGGGCTGCCCCTGCT...AGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | GGCTTTCTTCTTTGGCCAGGGATACAGGGCAGATGTTaGGGCGAAACCCCTAGCTCACTCTTTATCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFLLWPGIQGRC*GETPSSLFIPP Trigger: CGGCGGGATAAAGAGTGAGCTAGGGGTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGCTCTCTGGACTCCCAGCGACATCCTTGCTAGATCTTGTGGCTTCCAGTGCCATCTCGATCGATaGAGTACCGGCCCTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKALWTPSDILARSCGFQCHLDR*STGPRS Trigger: ACTCCGAGGGCCGGTACTTCATCGATCGAGATGGCA...CTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAGTCCAGAGAGCTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGCTGAAACAAGGCCAGAGCCACAGTGCTGGACTAAGCTTCAAGCAGGGTCGCCCTTCAGTGGCTaGATGTTCTCCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFAETRPEPQCWTKLQAGSPFSG*MFSSCS Trigger: GGAGCAGCTGGAGAACATGCAGCCACTGAAGGGCGA...CCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTCTTCGGAGCTGGACATaGCACCGTCCGAGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLSSCFHSMFYFALRSALRSWT*HRPSDG Trigger: GCCGTCACTCGGACGGTGCCATGTCCAGCTCCGAAG...AGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | AGGTATCAAAAGCTCTCTGGACTCCCAGCGACATCCTaGCTAGATCTTGTGGCTTCCAGTGAAGACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYQKLSGLPATS*LDLVASSEDCQ Trigger: CTGGCAGTCTTCACTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAGTCCAGAGAGCTTTTGATACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | AAGGAGCACACTGGGAAGAGATACAGGCTTTCTTCTTaGGCCAGGGATACAGGGCAGATGTTTGGGCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEHTGKRYRLSS*ARDTGQMFGRN Trigger: GTTTCGCCCAAACATCTGCCCTGTATCCCTGGCCAAAGAAGAAAGCCTGTATCTCTTCCCAGTGTGCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | AACAGTATCTCCAGCAAGTCACAAAGATGGCATCTTTACCCAGCATCTTTCAACGGGCTGAGAGGTCAGTaGCCAGGCAGTGCAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSISSKSQRWHLYPASFNGLRGQ*PGSARG Trigger: ACCTCTTGCACTGCCTGGTCACTGACCTCTCAGCCC...GTTGAAAGATGCTGGGTAAAGATGCCATCTTTGTGACTTGCTGGAGATACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATTGCGTTCTGCTTACTGGGCCTCCTTGTaGACAGCTCGCACATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPLSSCFHSMFYFALRSAYWASL*TARTCS Trigger: GGAGCATGTGCGAGCTGTGCACAAGGAGGCCCAGTA...AGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | TCCCCCTGGGATGTGCTGTCTTCCAGGATAGCTCTCTaGCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPWDVLSSRIAL*PSVFLFPLYVL Trigger: TAAAACATAGAGTGGAAACAGGAAGACAGAGGGCAAGAGAGCTATCCTGGAAGACAGCACATCCCAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | GAGAACAAGAGGTTCCACCATGGCTGGCTTTCATGGTaGGGTATACAACAGCCAGGTGAACACACAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ENKRFHHGWLSW*GIQQPGEHTEV Trigger: TACCTCTGTGTGTTCACCTGGCTGTTGTATACCCAACCATGAAAGCCAGCCATGGTGGAACCTCTTGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGCTCTCTGGACTCCCAGCGACATCCTTGCTAGATCTTGTGGCTTCCAGTGCAGTAGTAATGGTTaGCAAGGTGCTTGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: SKALWTPSDILARSCGFQCSSNG*QGACHT Trigger: TGTGTGACAAGCACCTTGTCAACCATTACTACTGCA...CTGGAAGCCACAAGATCTAGCAAGGATGTCGCTGGGAGTCCAGAGAGCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CCA 90 bp | TTATTCAGAAGTCACCCCCAGCCACCACATTCAACAGTGCATTTCAGACTTGGCACGTCCACTTCACAGTaGTGCTCAAAGAGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRSHPQPPHSTVHFRLGTSTSQ*CSKSCP Trigger: TGGACAGCTCTTTGAGCACCACTGTGAAGTGGACGT...GCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCTGGGGGTGACTTCTGAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | AGCCACCACATTCAACAGTGCATTTCAGACTTGGCCTaGGCTTCTCGTGAGAGAGCCAAAACAGGCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHHIQQCISDLA*ASRERAKTGYE Trigger: TTCATAGCCTGTTTTGGCTCTCTCACGAGAAGCCAAGGCCAAGTCTGAAATGCACTGTTGAATGTGGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR TCA 90 bp | TTTTACTTTGCATTGCGTTCTGCTGTGGCTAATGTTACACCATGTGCTGCTATCCTTTGTAATAGGGCATaGGTCCCAGGAAGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYFALRSAVANVTPCAAILCNRA*VPGRPG Trigger: GCCAGGCCTTCCTGGGACTCATGCCCTATTACAAAG...GATAGCAGCACATGGTGTAACATTAGCCACAGCAGAACGCAATGCAAAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | GCCCTCTGTCTTCCTGTTTCCACTCTATGTTTTACTTaGCATTGCGTTCTGCTGTGGCTAATGTTACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALCLPVSTLCFT*HCVLLWLMLHH Trigger: ATGGTGTAACATTAGCCACAGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAGAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTTATTCCATTTAAGAGAAGTTCCAAGAGGGAAGAGAAGGCTAGTGAGGAGTCAGTGACCAGGCAGTaGAAGAGGTCGTATACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFIPFKRSSKREEKASEESVTRQ*KRSYTS Trigger: TGATGTATACGACCTCTTGCACTGCCTGGTCACTGA...CTCCTCACTAGCCTTCTCTTCCCTCTTGGAACTTCTCTTAAATGGAATAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| 3UTR CAA 72 bp | CTGTCTTCCTGTTTCCACTCTATGTTTTACTTTGCATaGCGTTCTGCTGTGGCTAATGTTACACCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSCFHSMFYFA*RSAVANVTPCA Trigger: AGCACATGGTGTAACATTAGCCACAGCAGAACGCAATGCAAAGTAAAACATAGAGTGGAAACAGGAAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS GCA 90 bp | TGGTCCACCGTGAGGCCCTGGGCTGAGAGGTCAGTGACCAGGCAGTaGAAGAGGTCGTATACATCAGCCACGGCCTCCCAGGGCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WSTVRPWAERSVTRQ*KRSYTSATASQGPK Trigger: TTTTGGGCCCTGGGAGGCCGTGGCTGATGTATACGACCTCTTGCACTGCCTGGTCACTGACCTCTCAGCCCAGGGCCTCACGGTGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS CCA 90 bp | TGGCATAGTACTGGGCCTCCTTGTGCACAGCTCGCACATGCTCCCTaGGGGGCAGGTCCCCTGAACGCAGGAAGTTCAGCACATCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WHSTGPPCAQLAHAP*GAGPLNAGSSAHLQ Trigger: TTGGAGATGTGCTGAACTTCCTGCGTTCAGGGGACCTGCCCCCCAGGGAGCATGTGCGAGCTGTGCACAAGGAGGCCCAGTACTATGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040616.9 ENSMUST00000144467.2 |
||
| CDS CCA 90 bp | TGCTTGTCACACACCCCGATACACTGGTGGTCCACCGTGAGGCCCTaGGCTGAGAGGTCAGTGACCAGGCAGTGCAAGAGGTCGTATACA | + |
|
Preference number: 5 (lower is better) Translates to: CLSHTPIHWWSTVRP*AERSVTRQCKRSYT Trigger: TGTATACGACCTCTTGCACTGCCTGGTCACTGACCTCTCAGCCCAGGGCCTCACGGTGGACCACCAGTGTATCGGGGTGTGTGACAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS GCA 90 bp | GAAGACACAGACTTTGAGCTTGGCAAAGCGGGCCTTCCGCTGTACTaGGCGAAGCCGGGCAATCTCCACAATCCGCTCCAAGTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EDTDFELGKAGLPLY*AKPGNLHNPLQVVF Trigger: GAAGACCACTTGGAGCGGATTGTGGAGATTGCCCGGCTTCGCGCAGTACAGCGGAAGGCCCGCTTTGCCAAGCTCAAAGTCTGTGTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144467.2 |
||
| CDS CCA 90 bp | TCAGCCACGGCCTCCCAGGGCCCAAAAGACACGTCCACTTCACAGTaGTGCTCAAAGAGCTGTCCATCACTCTCACTCCGCTCAAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SATASQGPKDTSTSQ*CSKSCPSLSLRSKR Trigger: TCGCTTTGAGCGGAGTGAGAGTGATGGACAGCTCTTTGAGCACCACTGTGAAGTGGACGTGTCTTTTGGGCCCTGGGAGGCCGTGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040616.9 ENSMUST00000144467.2 |
||
| CDS GCA 90 bp | GAAGACACAGACTTTGAGCTTGGCAAAGCGGGCCTTCCGCTGTACTaGGCGAAGCCGGGCAATCTCCACAATCCGCTCCAAGTGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EDTDFELGKAGLPLY*AKPGNLHNPLQVVF Trigger: AAAGACCACTTGGAGCGGATTGTGGAGATTGCCCGGCTTCGCGCAGTACAGCGGAAGGCCCGCTTTGCCAAGCTCAAAGTCTGTGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTAACTGCCCCGGGCTTAATTGTCTGCTTTCTACCCACGTGGGCATCATCCACACAGACTTTGAGCTaGGCAAAGCGGGCCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLTAPGLIVCFLPTWASSTQTLS*AKRAFR Trigger: GCGGAAGGCCCGCTTTGCCAAGCTCAAAGTCTGTGT...GGATGATGCCCACGTGGGTAGAAAGCAGACAATTAAGCCCGGGGCAGTTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCCCCAGGCCTTCTATCCCTCAGACTGCACCACTCTGATCCTACAGGACTGATGGGCATCTCTTCCTaGAAGACACAGACTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAPGLLSLRLHHSDPTGLMGISS*KTQTLS Trigger: GCTCAAAGTCTGTGTCTTCAAGGAAGAGATGCCCAT...CAGTCCTGTAGGATCAGAGTGGTGCAGTCTGAGGGATAGAAGGCCTGGGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTTGCTGAAACAAGGCCAGAGCCACAGTGCTGGACTAAGCTTCAAGCAGGGTGGTTGACAAGGTGCTaGTCACACACCCCGATACAC | + |
|
Preference number: 5 (lower is better) Translates to: IFAETRPEPQCWTKLQAGWLTRC*SHTPIH Trigger: GTGTATCGGGGTGTGTGACAAGCACCTTGTCAACCA...CCCTGCTTGAAGCTTAGTCCAGCACTGTGGCTCTGGCCTTGTTTCAGCAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||
| CDS TCA 72 bp | TCTTCGGCTTCGGAGCTGGACATGGCACCGTCCGAGTaGCGGCTGTCTGGCTCCCGCCCGGTGACTACCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSASELDMAPSE*RLSGSRPVTTT Trigger: GGTGGTAGTCACCGGGCGGGAGCCAGACAGCCGTCACTCGGACGGTGCCATGTCCAGCTCCGAAGCCGAAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040616.9 ENSMUST00000144878.3 |
||
| CDS CCA 72 bp | GCTCCAGGAAGTCGTCTTCGGCTTCGGAGCTGGACATaGCACCGTCCGAGTGACGGCTGTCTGGCTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: APGSRLRLRSWT*HRPSDGCLAPA Trigger: GGCGGGAGCCAGACAGCCGTCACTCGGACGGTGCCATGTCCAGCTCCGAAGCCGAAGACGACTTCCTGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040616.9 ENSMUST00000144878.3 |
||
| CDS CCA 72 bp | TGGCCGGCTCCAGGAAGTCGTCTTCGGCTTCGGAGCTaGACATGGCACCGTCCGAGTGACGGCTGTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WPAPGSRLRLRS*TWHRPSDGCLA Trigger: AGCCAGACAGCCGTCACTCGGACGGTGCCATGTCCAGCTCCGAAGCCGAAGACGACTTCCTGGAGCCGGCCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040616.9 ENSMUST00000144467.2 ENSMUST00000144878.3 |
||
| CDS CCA 72 bp | ACTGGGCCTCCTTGTGCACAGCTCGCACATGCTCCCTaGGGGGCAGGTCCCCTGAACGCAGGAAGTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGPPCAQLAHAP*GAGPLNAGSSA Trigger: TGCTGAACTTCCTGCGTTCAGGGGACCTGCCCCCCAGGGAGCATGTGCGAGCTGTGCACAAGGAGGCCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040616.9 ENSMUST00000144467.2 |
||
| CDS GCA 72 bp | GACTTTGAGCTTGGCAAAGCGGGCCTTCCGCTGTACTaGGCGAAGCCGGGCAATCTCCACAATCCGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: DFELGKAGLPLY*AKPGNLHNPLQ Trigger: TTGGAGCGGATTGTGGAGATTGCCCGGCTTCGCGCAGTACAGCGGAAGGCCCGCTTTGCCAAGCTCAAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040616.9 ENSMUST00000144467.2 |
||
| CDS TCA 72 bp | CCACAATCCGCTCCAAGTGGTCTTTGTAATAGGGCATaGGTCCCAGGAAGGCCTGGCGCACCTTCTCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PQSAPSGLCNRA*VPGRPGAPSRP Trigger: AGGGCGAGAAGGTGCGCCAGGCCTTCCTGGGACTCATGCCCTATTACAAAGACCACTTGGAGCGGATTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040616.9 |
||