Pregenerated sensors for KCTD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046523Ensembl transcript IDs: ENSMUST00000050120.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGTTAGCTCACAGTACTTGCTTAGCAGCCGGGCTCTGGACTAGCTaGCTGGGCACGTTGTTTGGGATGCCTTTGATTCTGTGGCTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: PLAHSTCLAAGLWTS*LGTLFGMPLILWLL Trigger: CAGAAGCCACAGAATCAAAGGCATCCCAAACAACGTGCCCAGCCAGCTAGTCCAGAGCCCGGCTGCTAAGCAAGTACTGTGAGCTAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 90 bp | TGGACTAGCTGGCTGGGCACGTTGTTTGGGATGCCTTTGATTCTGTaGCTTCTGAAGCTTGCTGGCTGCATGCTTGTTGCCTTTGTTCAT | + |
|
Preference number: 1 (lower is better) Translates to: WTSWLGTLFGMPLIL*LLKLAGCMLVAFVH Trigger: ATGAACAAAGGCAACAAGCATGCAGCCAGCAAGCTTCAGAAGCCACAGAATCAAAGGCATCCCAAACAACGTGCCCAGCCAGCTAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 90 bp | ATTTACATACCGTTAGCTCACAGTACTTGCTTAGCAGCCGGGCTCTaGACTAGCTGGCTGGGCACGTTGTTTGGGATGCCTTTGATTCTG | + |
|
Preference number: 1 (lower is better) Translates to: IYIPLAHSTCLAAGL*TSWLGTLFGMPLIL Trigger: CAGAATCAAAGGCATCCCAAACAACGTGCCCAGCCAGCTAGTCCAGAGCCCGGCTGCTAAGCAAGTACTGTGAGCTAACGGTATGTAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 90 bp | CAAGAGTCATTGCATGGGCTAGGTCCAAATACAGGCAAATGTATGTaGAGGTCCTGGAAGTGTAGTAACAACCTTTGCCACCTTCCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: QESLHGLGPNTGKCM*RSWKCSNNLCHLPL Trigger: TAAAGGAAGGTGGCAAAGGTTGTTACTACACTTCCAGGACCTGCACATACATTTGCCTGTATTTGGACCTAGCCCATGCAATGACTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 90 bp | TTGCATGGGCTAGGTCCAAATACAGGCAAATGTATGTGCAGGTCCTaGAAGTGTAGTAACAACCTTTGCCACCTTCCTTTAAGAGGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LHGLGPNTGKCMCRS*KCSNNLCHLPLRGE Trigger: TTCACCTCTTAAAGGAAGGTGGCAAAGGTTGTTACTACACTTCCAGGACCTGCACATACATTTGCCTGTATTTGGACCTAGCCCATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 90 bp | ACAGGCAAATGTATGTGCAGGTCCTGGAAGTGTAGTAACAACCTTTaGCACCTTCCTTTAAGAGGTGAAGAGACACTGATGAGTTCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: TGKCMCRSWKCSNNL*HLPLRGEETLMSSL Trigger: TAAAGAACTCATCAGTGTCTCTTCACCTCTTAAAGGAAGGTGGCAAAGGTTGTTACTACACTTCCAGGACCTGCACATACATTTGCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 90 bp | ATATTTGTTTTTCATATTTTAAAGTTGGGTGCAAGAGTCATTGCATaGGCTAGGTCCAAATACAGGCAAATGTATGTGCAGGTCCTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: IFVFHILKLGARVIA*ARSKYRQMYVQVLE Trigger: TTCCAGGACCTGCACATACATTTGCCTGTATTTGGACCTAGCCCATGCAATGACTCTTGCACCCAACTTTAAAATATGAAAAACAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 90 bp | AGAGAAACACTGGAACAAGCTTATTCGGTATTTTCATCTGTAGGCTaGGATAGAGTCATCTGCTTTTTATTATTTGAGGGCTTATGTTTC | + |
|
Preference number: 1 (lower is better) Translates to: RETLEQAYSVFSSVG*DRVICFLLFEGLCF Trigger: GAAACATAAGCCCTCAAATAATAAAAAGCAGATGACTCTATCCCAGCCTACAGATGAAAATACCGAATAAGCTTGTTCCAGTGTTTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 90 bp | CAAGCTTATTCGGTATTTTCATCTGTAGGCTGGGATAGAGTCATCTaGTTTTTATTATTTGAGGGCTTATGTTTCATTCATTCTTCATGC | + |
|
Preference number: 1 (lower is better) Translates to: QAYSVFSSVGWDRVI*FLLFEGLCFIHSSC Trigger: GCATGAAGAATGAATGAAACATAAGCCCTCAAATAATAAAAAGCAGATGACTCTATCCCAGCCTACAGATGAAAATACCGAATAAGCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CAA 90 bp | GCCGGGCTCTGGACTAGCTGGCTGGGCACGTTGTTTGGGATGCCTTaGATTCTGTGGCTTCTGAAGCTTGCTGGCTGCATGCTTGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AGLWTSWLGTLFGMP*ILWLLKLAGCMLVA Trigger: GGCAACAAGCATGCAGCCAGCAAGCTTCAGAAGCCACAGAATCAAAGGCATCCCAAACAACGTGCCCAGCCAGCTAGTCCAGAGCCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCAGCTGGGACCAGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTTTAGCTCACAGTACTTaGTTAGCAGCCGGGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ALSWDQATHAVLYWKVVALAHST*LAAGLW Trigger: CCAGAGCCCGGCTGCTAAGCAAGTACTGTGAGCTAA...AGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCTGGTCCCAGCTGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCAGGGCTCTGGACTAGCTaGCTGGGCACGTTGTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TIRNDVGEATGVVQVLFAGLWTS*LGTLFG Trigger: CCCAAACAACGTGCCCAGCCAGCTAGTCCAGAGCCC...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCAGCTTGCTGGCTGCATaGTTGTTGCCTTTGTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: RPPMLCCTGKWWLISVPCSLLAA*LLPLFM Trigger: CATGAACAAAGGCAACAAGCATGCAGCCAGCAAGCT...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR GCA 90 bp | GACCACAGCTTCACTGTCGGTGGAAATGTGATGGCAGAACACCCCAGAGAAGGACTGAAGCTTGCTGGCTaGATGCTTGTTGCCTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DHSFTVGGNVMAEHPREGLKLAG*MLVAFV Trigger: AACAAAGGCAACAAGCATGCAGCCAGCAAGCTTCAG...TCCTTCTCTGGGGTGTTCTGCCATCACATTTCCACCGACAGTGAAGCTGTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR GCA 90 bp | CATCAGAACAGATATTTTAGTGTAGCAGAACGGAAATTGAGTAGTTGGTGGTGGGTGGCTTCTGAAGCTTaGTGGCTGCATGCTTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: HQNRYFSVAERKLSSWWWVASEA*WLHACC Trigger: GCAACAAGCATGCAGCCAGCAAGCTTCAGAAGCCAC...CCACCACCAACTACTCAATTTCCGTTCTGCTACACTAAAATATCTGTTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR TCA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGCCTTTCTTGCAGATCTaGGACTGGCTCAGCTGCGTC | + |
|
Preference number: 2 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLPFLQI*DWLSCV Trigger: GACGCAGCTGAGCCAGTCTCAGATCTGCAAGAAAGG...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CAA 90 bp | CTTCCTTTAAGAGGTGAAGAGACACTGATGAGTTCTTTATACCATTaGCTTATGAGAGAAACTACACAGTCATTGAAACAGAACGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPLRGEETLMSSLYH*LMRETTQSLKQNGQ Trigger: CTGACCGTTCTGTTTCAATGACTGTGTAGTTTCTCTCATAAGCAAATGGTATAAAGAACTCATCAGTGTCTCTTCACCTCTTAAAGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR TCA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGGGAAGGATTCAAACATaGATCACCACTTCCAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLGRIQT*ITTSSL Trigger: CAAGCTGGAAGTGGTGATTCATGTTTGAATCCTTCC...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGTCCCTTGTGAAATCATaGGAAGCCTTTCTTGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLSLVKS*EAFLAD Trigger: ATCTGCAAGAAAGGCTTCCCATGATTTCACAAGGGA...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 72 bp | CCGTTAGCTCACAGTACTTGCTTAGCAGCCGGGCTCTaGACTAGCTGGCTGGGCACGTTGTTTGGGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLAHSTCLAAGL*TSWLGTLFGMP Trigger: AGGCATCCCAAACAACGTGCCCAGCCAGCTAGTCCAGAGCCCGGCTGCTAAGCAAGTACTGTGAGCTAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | ACCCTGCACTCAGCTGGGACCAGGCCACCCATGCTGTaGTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLHSAGTRPPML*CTGKWWLISVP Trigger: AGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCTGGTCCCAGCTGAGTGCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCCTGGCTGCATGCTTGTaGCCTTTGTTCATGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RPPMLCCTGKWWLISVPCLAACL*PLFMRQ Trigger: CTGTCTCATGAACAAAGGCAACAAGCATGCAGCCAG...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCTTGCTGGCTGCATGCTaGTTGCCTTTGTTCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RPPMLCCTGKWWLISVPCLLAAC*LPLFMR Trigger: TCTCATGAACAAAGGCAACAAGCATGCAGCCAGCAA...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCAGTTAGCTCACAGTACTaGCTTAGCAGCCGGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TIRNDVGEATGVVQVLFAVSSQY*LSSRAL Trigger: CAGAGCCCGGCTGCTAAGCAAGTACTGTGAGCTAAC...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CAA 90 bp | GACCACAGCTTCACTGTCGGTGGAAATGTGATGGCAGAACACCCCAGAGAAGGATTGTTTGGGATGCCTTaGATTCTGTGGCTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DHSFTVGGNVMAEHPREGLFGMP*ILWLLK Trigger: CTTCAGAAGCCACAGAATCAAAGGCATCCCAAACAA...TCCTTCTCTGGGGTGTTCTGCCATCACATTTCCACCGACAGTGAAGCTGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | TGGCTCAGCTGCGTCTCCAGTGACACATTATGTCAGTaGGTCTTTATTATCTGCACTGAAATCTTGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WLSCVSSDTLCQ*VFIICTEILGE Trigger: CTCTCCCAAGATTTCAGTGCAGATAATAAAGACGCACTGACATAATGTGTCACTGGAGACGCAGCTGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | TTGCATGGGCTAGGTCCAAATACAGGCAAATGTATGTaGAGGTCCTGGAAGTGTAGTAACAACCTTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LHGLGPNTGKCM*RSWKCSNNLCH Trigger: GTGGCAAAGGTTGTTACTACACTTCCAGGACCTGCACATACATTTGCCTGTATTTGGACCTAGCCCATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | TGTATGTGCAGGTCCTGGAAGTGTAGTAACAACCTTTaGCACCTTCCTTTAAGAGGTGAAGAGACACTGATG | + |
|
Preference number: 3 (lower is better) Translates to: CMCRSWKCSNNL*HLPLRGEETLM Trigger: CATCAGTGTCTCTTCACCTCTTAAAGGAAGGTGGCAAAGGTTGTTACTACACTTCCAGGACCTGCACATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCATTTTACAGTCACATTTaGATTCACTGTTACCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TIRNDVGEATGVVQVLFAFYSHI*IHCYPC Trigger: GCAGGGGTAACAGTGAATCAAAATGTGACTGTAAAA...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 72 bp | CTAGGTCCAAATACAGGCAAATGTATGTGCAGGTCCTaGAAGTGTAGTAACAACCTTTGCCACCTTCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGPNTGKCMCRS*KCSNNLCHLPL Trigger: TAAAGGAAGGTGGCAAAGGTTGTTACTACACTTCCAGGACCTGCACATACATTTGCCTGTATTTGGACCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 72 bp | CTTGGTTATGAGAAACTAAATTCCCTTGTGAAATCATaGGAAGCCTTTCTTGCAGATCTGAGACTGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGYEKLNSLVKS*EAFLADLRLAQ Trigger: CTGAGCCAGTCTCAGATCTGCAAGAAAGGCTTCCCATGATTTCACAAGGGAATTTAGTTTCTCATAACCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | TACACAGTCATTGAAACAGAACGGTCAGGGAAGCTTTaGTCTTGGCCTGTTAGAACAGATCAAGATATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YTVIETERSGKL*SWPVRTDQDIL Trigger: TAAGATATCTTGATCTGTTCTAACAGGCCAAGAGCAAAGCTTCCCTGACCGTTCTGTTTCAATGACTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CCA 72 bp | TTTCATATTTTAAAGTTGGGTGCAAGAGTCATTGCATaGGCTAGGTCCAAATACAGGCAAATGTATGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FHILKLGARVIA*ARSKYRQMYVQ Trigger: CTGCACATACATTTGCCTGTATTTGGACCTAGCCCATGCAATGACTCTTGCACCCAACTTTAAAATATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGGGGGTATATAAACAGTaGAATAGCAGCCACTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLGVYKQ*NSSHWQ Trigger: TTGCCAGTGGCTGCTATTCAACTGTTTATATACCCC...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR TCA 72 bp | GTTAATCCTCCTGCCTCAACTGGAAGGATTCAAACATaGATCACCACTTCCAGCTTGTTTATTTTAAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: VNPPASTGRIQT*ITTSSLFILNL Trigger: TAAGTTTAAAATAAACAAGCTGGAAGTGGTGATTCATGTTTGAATCCTTCCAGTTGAGGCAGGAGGATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | TCGGTATTTTCATCTGTAGGCTGGGATAGAGTCATCTaGTTTTTATTATTTGAGGGCTTATGTTTCATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SVFSSVGWDRVI*FLLFEGLCFIH Trigger: ATGAATGAAACATAAGCCCTCAAATAATAAAAAGCAGATGACTCTATCCCAGCCTACAGATGAAAATACCGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR GCA 72 bp | TTATTATTTGAGGGCTTATGTTTCATTCATTCTTCATaGTACACAGACACATTTTACAGTACAGCAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFEGLCFIHSS*YTDTFYSTAES Trigger: GCTTTCTGCTGTACTGTAAAATGTGTCTGTGTAGCATGAAGAATGAATGAAACATAAGCCCTCAAATAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR TCA 90 bp | GCACTCAGCTGGGACCAGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATATCCACCAACGTTaGGGGTCATCAGCGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALSWDQATHAVLYWKVVANIHQR*GSSAWI Trigger: AATCCACGCTGATGACCCTCAACGTTGGTGGATATT...AGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCTGGTCCCAGCTGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR TCA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCCCTCTGCCAGCCCCTTaGGCTGGAAGAATTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPPMLCCTGKWWLISVPCPLPAP*AGRILL Trigger: AAGCAGAATTCTTCCAGCTCAAGGGGCTGGCAGAGG...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CCA 90 bp | GCACTCAGCTGGGACCAGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTGCCATCAGCATCGAATaGACAGAGGATTTTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALSWDQATHAVLYWKVVAAISIE*TEDFPI Trigger: AATGGGAAAATCCTCTGTCCATTCGATGCTGATGGC...AGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCTGGTCCCAGCTGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CAA 72 bp | TGGACTAGCTGGCTGGGCACGTTGTTTGGGATGCCTTaGATTCTGTGGCTTCTGAAGCTTGCTGGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WTSWLGTLFGMP*ILWLLKLAGCM Trigger: CATGCAGCCAGCAAGCTTCAGAAGCCACAGAATCAAAGGCATCCCAAACAACGTGCCCAGCCAGCTAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCCACAGAGAACTCCTCTaGAAACCCATCCAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPPMLCCTGKWWLISVPCHRELL*KPIQPA Trigger: AGCAGGCTGGATGGGTTTCCAGAGGAGTTCTCTGTG...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR GCA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCTGGATTTGCAGTTCTTaGCTTGCTCGGCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPMLCCTGKWWLISVPCWICSS*LARHLP Trigger: TGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCA...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR TCA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCAAGTTTAGGACATGCCTaGAGAGAAGCCCGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TIRNDVGEATGVVQVLFASLGHA*REARPC Trigger: ACAGGGACGGGCTTCTCTTCAGGCATGTCCTAAACT...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR GCA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCATTGCAGTTCTTGCCTTaGTCGGCATCTTCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TIRNDVGEATGVVQVLFALQFLP*SASSTL Trigger: CAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAA...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCTTCAAGGAAAGTGTCTaGGTACTTGGTCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPPMLCCTGKWWLISVPCFKESV*VLGQCL Trigger: CAGACACTGACCAAGTACCCAGACACTTTCCTTGAA...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR TCA 90 bp | GACCACAGCTTCACTGTCGGTGGAAATGTGATGGCAGAACACCCCAGAGAAGGACCTTGTGAGCGATCGTaGTTATCTGTTATTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DHSFTVGGNVMAEHPREGPCERS*LSVISK Trigger: CTTGGAAATAACAGATAATCACGATCGCTCACAAGG...TCCTTCTCTGGGGTGTTCTGCCATCACATTTCCACCGACAGTGAAGCTGTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR TCA 90 bp | CATCAGAACAGATATTTTAGTGTAGCAGAACGGAAATTGAGTAGTTGGTGGTGGGCCCGTCCCTGTCTATaGAGTAATGGCCATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HQNRYFSVAERKLSSWWWARPCL*SNGHQH Trigger: ATGCTGATGGCCATTACTTCATAGACAGGGACGGGC...CCACCACCAACTACTCAATTTCCGTTCTGCTACACTAAAATATCTGTTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CCA 90 bp | CATCAGAACAGATATTTTAGTGTAGCAGAACGGAAATTGAGTAGTTGGTGGTGGCATCCAGCCTGCTTTTaGATACCAGAACAATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQNRYFSVAERKLSSWWWHPACF*IPEQCE Trigger: CTCGCATTGTTCTGGTATCCAAAAGCAGGCTGGATG...CCACCACCAACTACTCAATTTCCGTTCTGCTACACTAAAATATCTGTTCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CAA 72 bp | TTATACCATTTGCTTATGAGAGAAACTACACAGTCATaGAAACAGAACGGTCAGGGAAGCTTTGCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYHLLMRETTQS*KQNGQGSFALG Trigger: GCCAAGAGCAAAGCTTCCCTGACCGTTCTGTTTCAATGACTGTGTAGTTTCTCTCATAAGCAAATGGTATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR GCA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGAGGAAGTTTAGGACATaGCTGAAGAGAAGCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLRKFRT*LKRSPS Trigger: GGACGGGCTTCTCTTCAGGCATGTCCTAAACTTCCT...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| 3UTR CAA 72 bp | AGAGGTGAAGAGACACTGATGAGTTCTTTATACCATTaGCTTATGAGAGAAACTACACAGTCATTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGEETLMSSLYH*LMRETTQSLKQ Trigger: CTGTTTCAATGACTGTGTAGTTTCTCTCATAAGCAAATGGTATAAAGAACTCATCAGTGTCTCTTCACCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR TCA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGAAATTGAATGATATTTaGCGACACAGAGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLKLNDI*RHRELL Trigger: GAGGAGTTCTCTGTGTCGTCAAATATCATTCAATTT...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS GCA 90 bp | CCACCAACGTTGAGGGTCATCAGCGTGGATTTGCAGTTCTTGCCTTaGTCGGCATCTTCCACGCTGTTGTGCCTCCCTTCGTACTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPTLRVISVDLQFLP*SASSTLLCLPSYSL Trigger: AAGGGAGTACGAAGGGAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | GCACTCAGCTGGGACCAGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAAATATCCACCAACGTaGAGGGTCATCAGCGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ALSWDQATHAVLYWKVVAKYPPT*RVISVD Trigger: ATCCACGCTGATGACCCTCAACGTTGGTGGATATTT...AGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCTGGTCCCAGCTGAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCACCCATGCTGTGCTGTACTGGAAAGTGGTGGCTAATTTCTGTCCCTTGCGTGGATTTGCAGTTCTaGCCTTGCTCGGCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPMLCCTGKWWLISVPCVDLQF*PCSASS Trigger: GGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCAC...GCAAGGGACAGAAATTAGCCACCACTTTCCAGTACAGCACAGCATGGGTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCATTTGCAGTTCTTGCCTaGCTCGGCATCTTCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: TIRNDVGEATGVVQVLFAFAVLA*LGIFHA Trigger: AGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAA...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | ACTATTAGGAATGATGTAGGTGAAGCCACAGGAGTGGTGCAGGTGCTCTTTGCACATCGCTGTGAACAATaGACCCTTTGGAGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TIRNDVGEATGVVQVLFAHRCEQ*TLWSSP Trigger: TGGACTGCTCCAAAGGGTCAATTGTTCACAGCGATG...TGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTACATCATTCCTAATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CCA 90 bp | GAGAAGCCCGTCCCTGTCTATGAAGTAATGGCCATCAGCATCGAATaGACAGAGGATTTTCCCATTTACGATACCTTCAAGGAAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKPVPVYEVMAISIE*TEDFPIYDTFKESV Trigger: GACACTTTCCTTGAAGGTATCGTAAATGGGAAAATCCTCTGTCCATTCGATGCTGATGGCCATTACTTCATAGACAGGGACGGGCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | GACCACAGCTTCACTGTCGGTGGAAATGTGATGGCAGAACACCCCAGAGAAGGATTCTTGAGCAAGAAGTaGATTTTCTCGAAATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DHSFTVGGNVMAEHPREGFLSKK*IFSKSF Trigger: GAAGGATTTCGAGAAAATCAACTTCTTGCTCAAGAA...TCCTTCTCTGGGGTGTTCTGCCATCACATTTCCACCGACAGTGAAGCTGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS TCA 90 bp | ATACCTTCAAGGAAAGTGTCTGGGTACTTGGTCAGTGTCTGCTTTTaGGTAATATATAAATATCCACCAACGTTGAGGGTCATCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPSRKVSGYLVSVCF*VIYKYPPTLRVISV Trigger: CACGCTGATGACCCTCAACGTTGGTGGATATTTATATATTACTCAAAAGCAGACACTGACCAAGTACCCAGACACTTTCCTTGAAGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGCCATCCAGCCTGCTTTaGGATACCAGAACAATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLPSSLL*DTRTMR Trigger: TCGCATTGTTCTGGTATCCAAAAGCAGGCTGGATGG...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS-3UTR CAA 90 bp | AAAACTAGACATTTTCTGCATACCTACAACACAACATTTAGGTGCTTGAATCTGGAAGAATTCTGCTTCTaGAGCAAGAAGTTGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTRHFLHTYNTTFRCLNLEEFCF*SKKLIF Trigger: GAAAATCAACTTCTTGCTCAAGAAGCAGAATTCTTC...CAGATTCAAGCACCTAAATGTTGTGTTGTAGGTATGCAGAAAATGTCTAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 90 bp | TCCACCAACGTTGAGGGTCATCAGCGTGGATTTGCAGTTCTTGCCTaGCTCGGCATCTTCCACGCTGTTGTGCCTCCCTTCGTACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: STNVEGHQRGFAVLA*LGIFHAVVPPFVLP Trigger: AGGGAGTACGAAGGGAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS GCA 72 bp | TTGAGGGTCATCAGCGTGGATTTGCAGTTCTTGCCTTaGTCGGCATCTTCCACGCTGTTGTGCCTCCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRVISVDLQFLP*SASSTLLCLPS Trigger: CGAAGGGAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 72 bp | GTTGAGGGTCATCAGCGTGGATTTGCAGTTCTTGCCTaGCTCGGCATCTTCCACGCTGTTGTGCCTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VEGHQRGFAVLA*LGIFHAVVPPF Trigger: GAAGGGAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 72 bp | CCAACGTTGAGGGTCATCAGCGTGGATTTGCAGTTCTaGCCTTGCTCGGCATCTTCCACGCTGTTGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PTLRVISVDLQF*PCSASSTLLCL Trigger: GAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 90 bp | AAATATCCACCAACGTTGAGGGTCATCAGCGTGGATTTGCAGTTCTaGCCTTGCTCGGCATCTTCCACGCTGTTGTGCCTCCCTTCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KYPPTLRVISVDLQF*PCSASSTLLCLPSY Trigger: GTACGAAGGGAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGGTGGATATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 72 bp | AAATATCCACCAACGTTGAGGGTCATCAGCGTGGATTaGCAGTTCTTGCCTTGCTCGGCATCTTCCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KYPPTLRVISVD*QFLPCSASSTL Trigger: CAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGGTGGATATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 90 bp | AGCGTGGATTTGCAGTTCTTGCCTTGCTCGGCATCTTCCACGCTGTaGTGCCTCCCTTCGTACTCCCTTTCCTTTTCTCTTCTGATTATT | + |
|
Preference number: 6 (lower is better) Translates to: SVDLQFLPCSASSTL*CLPSYSLSFSLLII Trigger: AATAATCAGAAGAGAAAAGGAAAGGGAGTACGAAGGGAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 90 bp | GTAATATATAAATATCCACCAACGTTGAGGGTCATCAGCGTGGATTaGCAGTTCTTGCCTTGCTCGGCATCTTCCACGCTGTTGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VIYKYPPTLRVISVD*QFLPCSASSTLLCL Trigger: GAGGCACAACAGCGTGGAAGATGCCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGGTGGATATTTATATATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CCA 72 bp | GTCCCTGTCTATGAAGTAATGGCCATCAGCATCGAATaGACAGAGGATTTTCCCATTTACGATACCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPVYEVMAISIE*TEDFPIYDTFK Trigger: CTTGAAGGTATCGTAAATGGGAAAATCCTCTGTCCATTCGATGCTGATGGCCATTACTTCATAGACAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 90 bp | ATTATGGCCTCAAACTTAAGAGTTTCCAAGGTGCAGACAAAGGTGTaGTCTTCCTTTAGTACAAGTCGAGTGCCGTTCTCAGACTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: IMASNLRVSKVQTKV*SSFSTSRVPFSDLM Trigger: CATCAAGTCTGAGAACGGCACTCGACTTGTACTAAAGGAAGACAACACCTTTGTCTGCACCTTGGAAACTCTTAAGTTTGAGGCCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS TCA 72 bp | GCATTACAGAAGATTCTCAGTCCTTGTGAGCGATCGTaGTTATCTGTTATTTCCAAGAAAGTAGTCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALQKILSPCERS*LSVISKKVVSR Trigger: CCGAGAGACTACTTTCTTGGAAATAACAGATAATCACGATCGCTCACAAGGACTGAGAATCTTCTGTAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CAA 72 bp | ACAGAGAACTCCTCTGGAAACCCATCCAGCCTGCTTTaGGATACCAGAACAATGCGAGATTTTATTTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TENSSGNPSSLL*DTRTMRDFIFD Trigger: ATCAAAAATAAAATCTCGCATTGTTCTGGTATCCAAAAGCAGGCTGGATGGGTTTCCAGAGGAGTTCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||
| CDS CCA 72 bp | GATTTTCCCATTTACGATACCTTCAAGGAAAGTGTCTaGGTACTTGGTCAGTGTCTGCTTTTGAGTAATATA | + |
|
Preference number: 6 (lower is better) Translates to: DFPIYDTFKESV*VLGQCLLLSNI Trigger: TATATTACTCAAAAGCAGACACTGACCAAGTACCCAGACACTTTCCTTGAAGGTATCGTAAATGGGAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050120.4 |
||