Pregenerated sensors for KCTD21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044952Ensembl transcript IDs: ENSMUST00000054107.6
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCGCCTCGGGCCACTGGCGAGACACTCTCCTCAGAGCCTTCGCTaGCATGAGCTGCTTGGGAACGCCTTCCCCAGTGTGACCAGGATC | + |
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Preference number: 1 (lower is better) Translates to: PRLGPLARHSPQSLR*HELLGNAFPSVTRI Trigger: GATCCTGGTCACACTGGGGAAGGCGTTCCCAAGCAGCTCATGTCAGCGAAGGCTCTGAGGAGAGTGTCTCGCCAGTGGCCCGAGGCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 90 bp | GGGCACCCCTCCTGCCTCAGCCTGGACACTCATGCCCCTAGGCCATaGCATGGCTCAACTTTCTCCCTGAGTGGAGCCACAAAGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GHPSCLSLDTHAPRP*HGSTFSLSGATKGS Trigger: AGAACCCTTTGTGGCTCCACTCAGGGAGAAAGTTGAGCCATGGCATGGCCTAGGGGCATGAGTGTCCAGGCTGAGGCAGGAGGGGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 90 bp | CCAAGAATCCTTCTATACCAGCCTCTTCAGGAAGGGCACCCCTCCTaGCTCAGCCTGGACACTCATGCCCCTAGGCCATGCCATGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PRILLYQPLQEGHPS*LSLDTHAPRPCHGS Trigger: TGAGCCATGGCATGGCCTAGGGGCATGAGTGTCCAGGCTGAGGCAGGAGGGGTGCCCTTCCTGAAGAGGCTGGTATAGAAGGATTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 90 bp | AACTTTGTAACCTCTCACTCACAGAGTGTAACTCTGGAAGCCCTTTaGTCTGTCCACCTGTGGATGCGGGCTCCAGGCTTCCCTAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: NFVTSHSQSVTLEAL*SVHLWMRAPGFPSC Trigger: ACAGCTAGGGAAGCCTGGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGTGAGTGAGAGGTTACAAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR TCA 90 bp | AGGTGTCCTGGTGCCTGGGCGCATCCTCAAGGCAAAGAACAGGAGTaGCTGGATTTGCTGCACATGTTGTTGCCTAGGAAACTAAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: RCPGAWAHPQGKEQE*LDLLHMLLPRKLKG Trigger: TCCTTTTAGTTTCCTAGGCAACAACATGTGCAGCAAATCCAGTCACTCCTGTTCTTTGCCTTGAGGATGCGCCCAGGCACCAGGACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CCA 90 bp | CATTCTAAAACACCCAAATACTGTTGCCTTTGGGCAAAGGTGTCCTaGTGCCTGGGCGCATCCTCAAGGCAAAGAACAGGAGTGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: HSKTPKYCCLWAKVS*CLGASSRQRTGVTG Trigger: TCCAGTCACTCCTGTTCTTTGCCTTGAGGATGCGCCCAGGCACCAGGACACCTTTGCCCAAAGGCAACAGTATTTGGGTGTTTTAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR TCA 90 bp | TGGCTTCGATACCATCACATCTTTGCAGGGGAAACAAACACTCTCTaGAGCCAAGAATCCTTCTATACCAGCCTCTTCAGGAAGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: WLRYHHIFAGETNTL*SQESFYTSLFRKGT Trigger: GGTGCCCTTCCTGAAGAGGCTGGTATAGAAGGATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CCA 90 bp | CAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTaGCTTCGATACCATCACATCTTTGCAGGGGAAACAAACACTCTC | + |
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Preference number: 1 (lower is better) Translates to: QKSGNSWITKCLPSS*LRYHHIFAGETNTL Trigger: GAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CCA 90 bp | TTCTTTGACTTACTTGAATATGACCACAGATCTGCTTGTCCTGATTaGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGGTGCAGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: FFDLLEYDHRSACPD*VLCRTFQSTPGAAA Trigger: AGCCGCTGCACCAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGTGGTCATATTCAAGTAAGTCAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 90 bp | CACGAAGTGTCTTCCATCTTCTTGGCTTCGATACCATCACATCTTTaGAGGGGAAACAAACACTCTCTGAAGCCAAGAATCCTTCTATAC | + |
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Preference number: 1 (lower is better) Translates to: HEVSSIFLASIPSHL*RGNKHSLKPRILLY Trigger: GTATAGAAGGATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGACACTTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CCA 90 bp | ACTTTGAACTTGTCATCACAAAGCTATCCATCGCCACTTCAAAAATaGCAAGAAAGGTGGTTCTGTTCAGAGGACATGTTGATTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: TLNLSSQSYPSPLQK*QERWFCSEDMLIPE Trigger: TTCTGGAATCAACATGTCCTCTGAACAGAACCACCTTTCTTGCCATTTTTGAAGTGGCGATGGATAGCTTTGTGATGACAAGTTCAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTCAGCCTGGACACTCATGCCCCTAGGCCATGCCATGGCTCAACTTTCTCCTCAGAGCCTTCGCTaGCATGAGCTGCTTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PASAWTLMPLGHAMAQLSPQSLR*HELLGN Trigger: GTTCCCAAGCAGCTCATGTCAGCGAAGGCTCTGAGG...AGAAAGTTGAGCCATGGCATGGCCTAGGGGCATGAGTGTCCAGGCTGAGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCTTAAGAGAAGTGTTGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTCCTCCTGCCTCAGCCTaGACACTCATGCCCCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: CSLKRSVGAGQLLRGPGIPPASA*TLMPLG Trigger: GCCTAGGGGCATGAGTGTCCAGGCTGAGGCAGGAGG...AATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGTGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCAGGTGTCCTGGTGCCTaGGCGCATCCTCAAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: TECNSGSPLLCPPVDAGSRCPGA*AHPQGK Trigger: TTTGCCTTGAGGATGCGCCCAGGCACCAGGACACCT...GGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCTATAAGACTCTCACTGCTGTAGTCACTCCACAGGGCCCCTTGCCTGCCCTGACTAGGGGCAGGTaGTTCCACCGTAAGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: GGYKTLTAVVTPQGPLPALTRGR*FHRKKT Trigger: AGTTTTCTTACGGTGGAATCACCTGCCCCTAGTCAG...GGCAGGCAAGGGGCCCTGTGGAGTGACTACAGCAGTGAGAGTCTTATAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 90 bp | GAGCTTTCTATGAGCCAGCACTGCTCAACCATAGCAGAAACTGCCTaGGGGATAGTGACCATTGTGTCACCAGGGGGTGTGCAAGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: ELSMSQHCSTIAETA*GIVTIVSPGGVQAG Trigger: GCCGGCTTGCACACCCCCTGGTGACACAATGGTCACTATCCCCAAGGCAGTTTCTGCTATGGTTGAGCAGTGCTGGCTCATAGAAAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCTATAAGACTCTCACTGCTGTAGTCACTCCACAGGGCCCCTTGCCTGCCCACGTATCCATGTACTaGGGAAGGTCTAACAACAAG | + |
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Preference number: 2 (lower is better) Translates to: GGYKTLTAVVTPQGPLPAHVSMY*GRSNNK Trigger: CTTGTTGTTAGACCTTCCTCAGTACATGGATACGTG...GGCAGGCAAGGGGCCCTGTGGAGTGACTACAGCAGTGAGAGTCTTATAGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTGGCTTCGGCAAAGGTGTCCTGGTaGCTGGGCGCATCCTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TEVRQQLDHEVSSIFLASAKVSW*LGASSR Trigger: CCTTGAGGATGCGCCCAGGCACCAGGACACCTTTGC...CGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGGAGCCTTCGCTGACATaGGCTGCTTGGGAACGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TDLLVLIGFSAELSRVPLEPSLT*AAWERL Trigger: AAGGCGTTCCCAAGCAGCTCATGTCAGCGAAGGCTC...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCACACCCAAATACTGTTaGCTTTGGGCAAAGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: TECNSGSPLLCPPVDAGSTPKYC*LWAKVS Trigger: GGACACCTTTGCCCAAAGGCAACAGTATTTGGGTGT...GGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR GCA 90 bp | TGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCAGGCTTTGTCTGGAGTTTCCGTaGTTACTGTGTCCCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CNSGSPLLCPPVDAGSRLCLEFP*LLCPRK Trigger: TTTCCTGGGACACAGTAAGCACGGAAACTCCAGACA...AAGCCTGGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAGAGCTTTCTATGAGCCAGCACTGCTCAACCATAGCAGAAACTGCCTTGTGGGCAAAGGTGTCCTaGTGCCTGGGCGCATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LKELSMSQHCSTIAETALWAKVS*CLGASS Trigger: TGAGGATGCGCCCAGGCACCAGGACACCTTTGCCCA...CAAGGCAGTTTCTGCTATGGTTGAGCAGTGCTGGCTCATAGAAAGCTCTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGACATCTTCAGTGTCTAGTCAAAGCAGGGACACGTATCCATGTACTGAGGGGTTAGCAGGGCACTaGCTAGGGGCAGGTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: VVTSSVSSQSRDTYPCTEGLAGH*LGAGDS Trigger: GGAATCACCTGCCCCTAGTCAGTGCCCTGCTAACCC...CTCAGTACATGGATACGTGTCCCTGCTTTGACTAGACACTGAAGATGTCACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTGGCTTCGGGCTCTCTCTGGAGATaGGTTAGCAGGGCACTGACT | + |
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Preference number: 2 (lower is better) Translates to: TEVRQQLDHEVSSIFLASGSLWR*VSRALT Trigger: AGTCAGTGCCCTGCTAACCCATCTCCAGAGAGAGCC...CGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | TGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCAGGCTTTCGCCACTTCAAAAATaGCAAGAAAGGTGGTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CNSGSPLLCPPVDAGSRLSPLQK*QERWFC Trigger: ACAGAACCACCTTTCTTGCCATTTTTGAAGTGGCGA...AAGCCTGGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCATCCTCAAGGCAAAGAACAGGAGTGACTGGATTTGCTGCACATGTTGTCAGAGAGACCTCCTGTaGGCTCTTCTTGTACGTTTC | + |
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Preference number: 2 (lower is better) Translates to: GRILKAKNRSDWICCTCCQRDLL*ALLVRF Trigger: GAAACGTACAAGAAGAGCCCACAGGAGGTCTCTCTG...ACAACATGTGCAGCAAATCCAGTCACTCCTGTTCTTTGCCTTGAGGATGCGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTCTTAAGAGAAGTGTTGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTATTATTGGTTTAAACTaGCTGGTGTCAGTGATGCCT | + |
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Preference number: 2 (lower is better) Translates to: CSLKRSVGAGQLLRGPGIIIGLN*LVSVMP Trigger: AGGCATCACTGACACCAGTCAGTTTAAACCAATAAT...AATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 90 bp | CTGCTGCTCTTTGTCATAGCCAGAGAGACCTCCTGTGGGCTCTTCTaGTACGTTTCAGCTGACTTTGAACTTGTCATCACAAAGCTATCC | + |
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Preference number: 2 (lower is better) Translates to: LLLFVIARETSCGLF*YVSADFELVITKLS Trigger: GGATAGCTTTGTGATGACAAGTTCAAAGTCAGCTGAAACGTACAAGAAGAGCCCACAGGAGGTCTCTCTGGCTATGACAAAGAGCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGTCTATGAGCCAGCACTaGTCAACCATAGCAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: TDLLVLIGFSAELSRVPLSMSQH*STIAET Trigger: AGTTTCTGCTATGGTTGAGCAGTGCTGGCTCATAGA...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 90 bp | ACAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTaGGCTTCGATACCATCACATCTTTGCAGGGGAAACAAACACTCT | + |
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Preference number: 2 (lower is better) Translates to: TEVRQQLDHEVSSIF*ASIPSHLCRGNKHS Trigger: AGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGAGAAAGGCCTTTAGTTGATTCCAGAAGGTaGACTTTGTTATGGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: KTATQRLLSPTIGRERPLVDSRR*TLLWGI Trigger: GATTCCCCATAACAAAGTTCACCTTCTGGAATCAAC...TAAAGGCCTTTCTCTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGAGAAAGGCCTTTAGTTCAGAGGACATGTTaGTTCCAGAAGGTGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: KTATQRLLSPTIGRERPLVQRTC*FQKVNF Trigger: AAAGTTCACCTTCTGGAATCAACATGTCCTCTGAAC...TAAAGGCCTTTCTCTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGCTGATAAAGCCAAGTTaGAAAGGGGAATCAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TDLLVLIGFSAELSRVPLLIKPS*KGESVL Trigger: CAGAACTGATTCCCCTTTGCAACTTGGCTTTATCAG...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGTGTCTTCCATCTTCTTaGCTTCGATACCATCACATC | + |
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Preference number: 2 (lower is better) Translates to: TDLLVLIGFSAELSRVPLCLPSS*LRYHHI Trigger: GATGTGATGGTATCGAAGCCAAGAAGATGGAAGACA...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTATTGCCTCAGGACCAAGTTTTGCCTCTAACTTTGTAACCTCTCACTCATGCAATCCACAGGGCTaGGATTACAGAAGTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: AFIASGPSFASNFVTSHSCNPQG*DYRSQA Trigger: TGCCTGACTTCTGTAATCCCAGCCCTGTGGATTGCA...TGAGTGAGAGGTTACAAAGTTAGAGGCAAAACTTGGTCCTGAGGCAATAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 90 bp | TCAACTTTCTCCCTGAGTGGAGCCACAAAGGGTTCTGGGAACATATaGCATTCTAAAACACCCAAATACTGTTGCCTTTGGGCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: STFSLSGATKGSGNI*HSKTPKYCCLWAKV Trigger: CACCTTTGCCCAAAGGCAACAGTATTTGGGTGTTTTAGAATGCAATATGTTCCCAGAACCCTTTGTGGCTCCACTCAGGGAGAAAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGGAGCTGATTCTGATAAAGCCAAGTTGCAAAGGGGAATCAGTTCTGAGAAATACTGTTGCCTTTaGGCAAAGGTGTCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: WKGADSDKAKLQRGISSEKYCCL*AKVSWC Trigger: GCACCAGGACACCTTTGCCCAAAGGCAACAGTATTT...CTCAGAACTGATTCCCCTTTGCAACTTGGCTTTATCAGAATCAGCTCCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 90 bp | AGACCTCCTGTGGGCTCTTCTTGTACGTTTCAGCTGACTTTGAACTaGTCATCACAAAGCTATCCATCGCCACTTCAAAAATGGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RPPVGSSCTFQLTLN*SSQSYPSPLQKWQE Trigger: TTCTTGCCATTTTTGAAGTGGCGATGGATAGCTTTGTGATGACAAGTTCAAAGTCAGCTGAAACGTACAAGAAGAGCCCACAGGAGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 90 bp | TCACGAAGTGTCTTCCATCTTCTTGGCTTCGATACCATCACATCTTaGCAGGGGAAACAAACACTCTCTGAAGCCAAGAATCCTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: SRSVFHLLGFDTITS*QGKQTLSEAKNPSI Trigger: TATAGAAGGATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGACACTTCGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CCA 90 bp | ACCATCACATCTTTGCAGGGGAAACAAACACTCTCTGAAGCCAAGAATCCTTCTAAGAACAGGAGTGACTaGATTTGCTGCACATGTTGT | + |
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Preference number: 2 (lower is better) Translates to: TITSLQGKQTLSEAKNPSKNRSD*ICCTCC Trigger: ACAACATGTGCAGCAAATCCAGTCACTCCTGTTCTT...AGAAGGATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR TCA 90 bp | GAAAGACGTCTGGCTTACAAAGATGGAAAGGAGCTGATTCTGATAAAGCCAAGTGAAACAAACACTCTCTaGAGCCAAGAATCCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: ERRLAYKDGKELILIKPSETNTL*SQESFY Trigger: ATAGAAGGATTCTTGGCTTCAGAGAGTGTTTGTTTC...ACTTGGCTTTATCAGAATCAGCTCCTTTCCATCTTTGTAAGCCAGACGTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGTGACATCTTCAGTGTCTAGTCAAAGCAGGGACACGTATCCATGTACTGAGGTTCTGGGAACATATTaGATTCTAAAACACCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: VVTSSVSSQSRDTYPCTEVLGTY*ILKHPN Trigger: ATTTGGGTGTTTTAGAATGCAATATGTTCCCAGAAC...CTCAGTACATGGATACGTGTCCCTGCTTTGACTAGACACTGAAGATGTCACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CCA 72 bp | CTGTGGATGCGGGCTCCAGGCTTCCCTAGCTGTGTGTaGAGCGCTTCTCGGGTGGGGGCTATAAGACTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LWMRAPGFPSCV*SASRVGAIRLS Trigger: TGAGAGTCTTATAGCCCCCACCCGAGAAGCGCTCCACACACAGCTAGGGAAGCCTGGAGCCCGCATCCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 72 bp | TCCTGCCTCAGCCTGGACACTCATGCCCCTAGGCCATaGCATGGCTCAACTTTCTCCCTGAGTGGAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: SCLSLDTHAPRP*HGSTFSLSGAT Trigger: TGTGGCTCCACTCAGGGAGAAAGTTGAGCCATGGCATGGCCTAGGGGCATGAGTGTCCAGGCTGAGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 72 bp | TCTCACTGCTGTAGTCACTCCACAGGGCCCCTTGCCTaGCGGGGAGTAGTGTCTGGAGTTTCCGTGCTTACT | + |
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Preference number: 3 (lower is better) Translates to: SHCCSHSTGPLA*RGVVSGVSVLT Trigger: AGTAAGCACGGAAACTCCAGACACTACTCCCCGGCAGGCAAGGGGCCCTGTGGAGTGACTACAGCAGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR GCA 72 bp | ACCTCTCACTCACAGAGTGTAACTCTGGAAGCCCTTTaGTCTGTCCACCTGTGGATGCGGGCTCCAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: TSHSQSVTLEAL*SVHLWMRAPGF Trigger: GAAGCCTGGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGTGAGTGAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGCCTCAGCCTGGACACTCATGCCCCTAGGCCATGCCATGGCTCAACTTTCTCAAATACTGTTGCCTTaGGGCAAAGGTGTCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PASAWTLMPLGHAMAQLSQILLP*GKGVLV Trigger: CACCAGGACACCTTTGCCCAAAGGCAACAGTATTTG...AGAAAGTTGAGCCATGGCATGGCCTAGGGGCATGAGTGTCCAGGCTGAGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR TCA 72 bp | GCCAAGGCTCTCTCTGGAGATGGGTTAGCAGGGCACTaGCTAGGGGCAGGTGATTCCACCGTAAGAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: AKALSGDGLAGH*LGAGDSTVRKL Trigger: CAGTTTTCTTACGGTGGAATCACCTGCCCCTAGTCAGTGCCCTGCTAACCCATCTCCAGAGAGAGCCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR GCA 72 bp | CCCAAATACTGTTGCCTTTGGGCAAAGGTGTCCTGGTaGCTGGGCGCATCCTCAAGGCAAAGAACAGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PKYCCLWAKVSW*LGASSRQRTGV Trigger: CACTCCTGTTCTTTGCCTTGAGGATGCGCCCAGGCACCAGGACACCTTTGCCCAAAGGCAACAGTATTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR TCA 72 bp | ATGCCCCTAGGCCATGCCATGGCTCAACTTTCTCCCTaGGTGGAGCCACAAAGGGTTCTGGGAACATATTGC | + |
|
Preference number: 3 (lower is better) Translates to: MPLGHAMAQLSP*VEPQRVLGTYC Trigger: GCAATATGTTCCCAGAACCCTTTGTGGCTCCACTCAGGGAGAAAGTTGAGCCATGGCATGGCCTAGGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CCA 72 bp | ACACCCAAATACTGTTGCCTTTGGGCAAAGGTGTCCTaGTGCCTGGGCGCATCCTCAAGGCAAAGAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TPKYCCLWAKVS*CLGASSRQRTG Trigger: TCCTGTTCTTTGCCTTGAGGATGCGCCCAGGCACCAGGACACCTTTGCCCAAAGGCAACAGTATTTGGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR TCA 72 bp | GGTGCCTGGGCGCATCCTCAAGGCAAAGAACAGGAGTaGCTGGATTTGCTGCACATGTTGTTGCCTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GAWAHPQGKEQE*LDLLHMLLPRK Trigger: TTTCCTAGGCAACAACATGTGCAGCAAATCCAGTCACTCCTGTTCTTTGCCTTGAGGATGCGCCCAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR GCA 72 bp | TATGACCACAGATCTGCTTGTCCTGATTGGGTTCTCTaGAGAACTTTCCAGAGTACCCCTGGTGCAGCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YDHRSACPDWVL*RTFQSTPGAAA Trigger: AGCCGCTGCACCAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGTGGTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCTATAAGACTCTCACTGCTGTAGTCACTCCACAGGGCCCCTTGCCTGCCGGTTCTGGGAACATATaGCATTCTAAAACACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGYKTLTAVVTPQGPLPAGSGNI*HSKTPK Trigger: TTTGGGTGTTTTAGAATGCAATATGTTCCCAGAACC...GGCAGGCAAGGGGCCCTGTGGAGTGACTACAGCAGTGAGAGTCTTATAGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTCTTAAGAGAAGTGTTGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTATAGCAGAAACTGCCTaGGGGATAGTGACCATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CSLKRSVGAGQLLRGPGIIAETA*GIVTIV Trigger: CACAATGGTCACTATCCCCAAGGCAGTTTCTGCTAT...AATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGGGACCCCTGGACTGCTaGCTGAACACCATTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TDLLVLIGFSAELSRVPLGPLDC*LNTISQ Trigger: TTGGGAAATGGTGTTCAGCAAGCAGTCCAGGGGTCC...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CCA 72 bp | TCCACAGGGCTGGGATTACAGAAGTCAGGCAACAGCTaGATCACGAAGTGTCTTCCATCTTCTTGGCTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: STGLGLQKSGNS*ITKCLPSSWLR Trigger: TCGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGTAATCCCAGCCCTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR GCA 72 bp | GGGTCAATACTGAAAGAGCTTTCTATGAGCCAGCACTaGTCAACCATAGCAGAAACTGCCTTGGGGATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSILKELSMSQH*STIAETALGIV Trigger: CACTATCCCCAAGGCAGTTTCTGCTATGGTTGAGCAGTGCTGGCTCATAGAAAGCTCTTTCAGTATTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CCA 72 bp | GGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTaGCTTCGATACCATCACATCTTTGCAGGGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GNSWITKCLPSS*LRYHHIFAGET Trigger: TGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGAGAAAGGCCTTTAACGTTTCAGCTGACTTaGAACTTGTCATCACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KTATQRLLSPTIGRERPLTFQLT*NLSSQS Trigger: GCTTTGTGATGACAAGTTCAAAGTCAGCTGAAACGT...TAAAGGCCTTTCTCTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAAGAGCTTTCTATGAGCCAGCACTGCTCAACCATAGCAGAAACTGCCTTGACTAAAAGGAGACTCTaGTTCCCTACCCTTCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LKELSMSQHCSTIAETALTKRRL*FPTLQQ Trigger: CTGTTGAAGGGTAGGGAACAAGAGTCTCCTTTTAGT...CAAGGCAGTTTCTGCTATGGTTGAGCAGTGCTGGCTCATAGAAAGCTCTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGGAGCTGATTCTGATAAAGCCAAGTTGCAAAGGGGAATCAGTTCTGAGTCCTGTGGGCTCTTCTaGTACGTTTCAGCTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: WKGADSDKAKLQRGISSESCGLF*YVSADF Trigger: AAAGTCAGCTGAAACGTACAAGAAGAGCCCACAGGA...CTCAGAACTGATTCCCCTTTGCAACTTGGCTTTATCAGAATCAGCTCCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAAGAGCTTTCTATGAGCCAGCACTGCTCAACCATAGCAGAAACTGCCTTGTTGCTGCACATGTTGTaGCCTAGGAAACTAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKELSMSQHCSTIAETALLLHML*PRKLKG Trigger: TCCTTTTAGTTTCCTAGGCAACAACATGTGCAGCAA...CAAGGCAGTTTCTGCTATGGTTGAGCAGTGCTGGCTCATAGAAAGCTCTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGAGAAAGGCCTTTAGATTTGCTGCACATGTaGTTGCCTAGGAAACTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTATQRLLSPTIGRERPLDLLHM*LPRKLK Trigger: TTTTAGTTTCCTAGGCAACAACATGTGCAGCAAATC...TAAAGGCCTTTCTCTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR GCA 72 bp | TATTATTGGTTTAAACTGACTGGTGTCAGTGATGCCTaGAATCCACAGGGCTGGGATTACAGAAGTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YYWFKLTGVSDA*NPQGWDYRSQA Trigger: TGCCTGACTTCTGTAATCCCAGCCCTGTGGATTGCAGGCATCACTGACACCAGTCAGTTTAAACCAATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CCA 72 bp | TTACTTGAATATGACCACAGATCTGCTTGTCCTGATTaGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLEYDHRSACPD*VLCRTFQSTPG Trigger: ACCAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGTGGTCATATTCAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR GCA 72 bp | TCTTCCATCTTCTTGGCTTCGATACCATCACATCTTTaGAGGGGAAACAAACACTCTCTGAAGCCAAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: SSIFLASIPSHL*RGNKHSLKPRI Trigger: GATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR GCA 72 bp | AAAGATGGAAAGGAGCTGATTCTGATAAAGCCAAGTTaGAAAGGGGAATCAGTTCTGAGTAGTGACATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KDGKELILIKPS*KGESVLSSDIF Trigger: GAAGATGTCACTACTCAGAACTGATTCCCCTTTGCAACTTGGCTTTATCAGAATCAGCTCCTTTCCATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CAA 72 bp | TCACCAGGGGGTGTGCAAGCCGGCATAAGGGATCCCTaGGAGATACTCAAGAAGAGGGGCTCCCTGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGGVQAGIRDP*EILKKRGSLPR Trigger: CCGTGGCAGGGAGCCCCTCTTCTTGAGTATCTCCAAGGGATCCCTTATGCCGGCTTGCACACCCCCTGGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR TCA 90 bp | GGGACTGGACAGTACGACAAGGAAGACTGCTCTCTTAAGAGAAGTGTTGGGGCTGTGCCTCCCGCACGGTaGAGTGGACCGTCTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGQYDKEDCSLKRSVGAVPPAR*SGPSAR Trigger: GCGTGCAGACGGTCCACTTCACCGTGCGGGAGGCAC...AGCCCCAACACTTCTCTTAAGAGAGCAGTCTTCCTTGTCGTACTGTCCAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | GGGGGCTATAAGACTCTCACTGCTGTAGTCACTCCACAGGGCCCCTTGCCTGCCAGCAGACCCATCTCCTaGAAGTCCTCTGGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GGYKTLTAVVTPQGPLPASRPIS*KSSGRS Trigger: GGATCTGCCAGAGGACTTCCAGGAGATGGGTCTGCT...GGCAGGCAAGGGGCCCTGTGGAGTGACTACAGCAGTGAGAGTCTTATAGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAGTGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCTCTGGCAGATCCAGGTaGGAGGTCCGCAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TECNSGSPLLCPPVDAGSSGRSR*EVRRKL Trigger: CAACTTCCTGCGGACCTCTCACCTGGATCTGCCAGA...GGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | ACAGAGTGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCCAGGCTGTAGATCTGTaGTGCCTCCCGCACGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TECNSGSPLLCPPVDAGSQAVDL*CLPHGE Trigger: TTCACCGTGCGGGAGGCACCACAGATCTACAGCCTG...GGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR GCA 90 bp | TGCTCTCTTAAGAGAAGTGTTGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTGCTGTAGATCTGTGGTaGCTCCCGCACGGTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLKRSVGAGQLLRGPGIAVDLW*LPHGEV Trigger: CACTTCACCGTGCGGGAGGCACCACAGATCTACAGC...AATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR GCA 90 bp | GGTGCAGCGGCTCAAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGAGATGGTTAGGGTCCTaGAAGTGGCTGGTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAAAQDSHTETPESHYRERWLGS*KWLVME Trigger: CTCCATCACCAGCCACTTGCAGGACCCTAACCATCT...CTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTTGAGCCGCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR GCA 90 bp | GGTGCAGCGGCTCAAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGTGGAAGCTGTTGATCTaGTTGTTGGCAGGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GAAAQDSHTETPESHYREWKLLI*LLAGTT Trigger: GGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCA...CTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTTGAGCCGCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CAA 72 bp | AACCTCTCACTCACAGAGTGTAACTCTGGAAGCCCTTaGCTCTGTCCACCTGTGGATGCGGGCTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLSLTECNSGSP*LCPPVDAGSRL Trigger: AAGCCTGGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACACTCTGTGAGTGAGAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR TCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGTGGGCATCTTCCCACTaGACATGGCCCCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLLVLIGFSAELSRVPLWASSH*TWPPAW Trigger: CCATGCTGGGGGCCATGTTCAGTGGGAAGATGCCCA...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTGGCTTCGTGGAGTCGGGGAAGCTaGTCAGGGTTGCCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVRQQLDHEVSSIFLASWSRGS*SGLPVR Trigger: CCTCACTGGCAACCCTGACCAGCTTCCCCGACTCCA...CGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | TTGCATTCTAAAACACCCAAATACTGTTGCCTTTGGGCAAAGGTGTCCTGGTGCTCCCGCACGGTGAAGTaGACCGTCTGCACGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSKTPKYCCLWAKVSWCSRTVK*TVCTRC Trigger: GCAGCGCGTGCAGACGGTCCACTTCACCGTGCGGGA...GCACCAGGACACCTTTGCCCAAAGGCAACAGTATTTGGGTGTTTTAGAATGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CAA 72 bp | ATGAGCCAGCACTGCTCAACCATAGCAGAAACTGCCTaGGGGATAGTGACCATTGTGTCACCAGGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSQHCSTIAETA*GIVTIVSPGGV Trigger: CACACCCCCTGGTGACACAATGGTCACTATCCCCAAGGCAGTTTCTGCTATGGTTGAGCAGTGCTGGCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CAA 72 bp | AGTACGACAAGGAAGACTGCTCTCTTAAGAGAAGTGTaGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: STTRKTALLREV*GLASYSGALGL Trigger: TAATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCAGTCTTCCTTGTCGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTGGCTTCGACCGTCTGCACGCGCTaGTTCAGGGTGATGTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVRQQLDHEVSSIFLASTVCTR*FRVMLS Trigger: GCTTAACATCACCCTGAAGCAGCGCGTGCAGACGGT...CGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR GCA 90 bp | ACGTTTCAGCTGACTTTGAACTTGTCATCACAAAGCTATCCATCGCCACTTCAAGTGAAGTGGACCGTCTaGACGCGCTGCTTCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFQLTLNLSSQSYPSPLQVKWTV*TRCFRV Trigger: CACCCTGAAGCAGCGCGTGCAGACGGTCCACTTCAC...TTGAAGTGGCGATGGATAGCTTTGTGATGACAAGTTCAAAGTCAGCTGAAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTTAAGAGAAGTGTTGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTCATTCTTCTCCGCCTTaGAGAGTTCTACCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLKRSVGAGQLLRGPGIHSSPP*RVLPLF Trigger: AAAAAGAGGTAGAACTCTCCAAGGCGGAGAAGAATG...AATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGCAGTCAAGAGTCAGATaGTTAGGGTCCTGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLLVLIGFSAELSRVPLQSRVR*LGSCKW Trigger: CCACTTGCAGGACCCTAACCATCTGACTCTTGACTG...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR TCA 90 bp | GTAGTGACATCTTCAGTGTCTAGTCAAAGCAGGGACACGTATCCATGTACTGAGTGCCATCACGGTCAATaGAGCAGTTACCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVTSSVSSQSRDTYPCTECHHGQ*SSYPGC Trigger: ACAGCCAGGGTAACTGCTTCATTGACCGTGATGGCA...CTCAGTACATGGATACGTGTCCCTGCTTTGACTAGACACTGAAGATGTCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | GAAGCCGTAAGAAAGACGTCTGGCTTACAAAGATGGAAAGGAGCTGATTCTGATATGAAGCAGTTACCCTaGCTGTCCCTCTTGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAVRKTSGLQRWKGADSDMKQLP*LSLLVG Trigger: GCCCACCAAGAGGGACAGCCAGGGTAACTGCTTCAT...ATCAGAATCAGCTCCTTTCCATCTTTGTAAGCCAGACGTCTTTCTTACGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTGACATCTTCAGTGTCTAGTCAAAGCAGGGACACGTATCCATGTACTGAGTCCAGAGCGTGTGGGTaGGAAGAGTCAATGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVTSSVSSQSRDTYPCTESRACG*EESMQN Trigger: GTTCTGCATTGACTCTTCCCACCCACACGCTCTGGA...CTCAGTACATGGATACGTGTCCCTGCTTTGACTAGACACTGAAGATGTCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| 3UTR CAA 72 bp | AGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTaGGCTTCGATACCATCACATCTTTGCAGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQQLDHEVSSIF*ASIPSHLCRGN Trigger: GTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR GCA 90 bp | ACAGATCTGCTTGTCCTGATTGGGTTCTCTGCAGAACTTTCCAGAGTACCCCTGAGCCTTTTCAGGTTCTaGTTGGTGTACTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDLLVLIGFSAELSRVPLSLFRF*LVYSSS Trigger: AGAGGAAGAGTACACCAAGCAGAACCTGAAAAGGCT...CAGGGGTACTCTGGAAAGTTCTGCAGAGAACCCAATCAGGACAAGCAGATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | GGGACTGGACAGTACGACAAGGAAGACTGCTCTCTTAAGAGAAGTGTTGGGGCTTTTTCAGGTTCTGCTTaGTGTACTCTTCCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTGQYDKEDCSLKRSVGAFSGSA*CTLPLE Trigger: TTCCAGAGGAAGAGTACACCAAGCAGAACCTGAAAA...AGCCCCAACACTTCTCTTAAGAGAGCAGTCTTCCTTGTCGTACTGTCCAGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | ACCATCACATCTTTGCAGGGGAAACAAACACTCTCTGAAGCCAAGAATCCTTCTGAAGTCCAGAGCGTGTaGGTGGGAAGAGTCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TITSLQGKQTLSEAKNPSEVQSV*VGRVNA Trigger: TGCATTGACTCTTCCCACCCACACGCTCTGGACTTC...AGAAGGATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGTCTGGCTTACAAAGATGGAAAGGAGCTGATTCTGATAAAGCCAAGTGGTGTACTCTTCCTCTaGAAGGCCTTCCACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERRLAYKDGKELILIKPSGVLFL*KAFHIG Trigger: GCCAATGTGGAAGGCCTTCCAGAGGAAGAGTACACC...ACTTGGCTTTATCAGAATCAGCTCCTTTCCATCTTTGTAAGCCAGACGTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR TCA 90 bp | GAAAGACGTCTGGCTTACAAAGATGGAAAGGAGCTGATTCTGATAAAGCCAAGTAGGTCCGCAGGAAGTTaGGGATATAGCGGAACACTT | + |
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Preference number: 4 (lower is better) Translates to: ERRLAYKDGKELILIKPSRSAGS*GYSGTL Trigger: AAGTGTTCCGCTATATCCTCAACTTCCTGCGGACCT...ACTTGGCTTTATCAGAATCAGCTCCTTTCCATCTTTGTAAGCCAGACGTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 72 bp | TTTGTCATAGCCAGAGAGACCTCCTGTGGGCTCTTCTaGTACGTTTCAGCTGACTTTGAACTTGTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: FVIARETSCGLF*YVSADFELVIT Trigger: TGTGATGACAAGTTCAAAGTCAGCTGAAACGTACAAGAAGAGCCCACAGGAGGTCTCTCTGGCTATGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 72 bp | GTCTTCCATCTTCTTGGCTTCGATACCATCACATCTTaGCAGGGGAAACAAACACTCTCTGAAGCCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: VFHLLGFDTITS*QGKQTLSEAKN Trigger: ATTCTTGGCTTCAGAGAGTGTTTGTTTCCCCTGCAAAGATGTGATGGTATCGAAGCCAAGAAGATGGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| 3UTR CAA 72 bp | GTGGGCTCTTCTTGTACGTTTCAGCTGACTTTGAACTaGTCATCACAAAGCTATCCATCGCCACTTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: VGSSCTFQLTLN*SSQSYPSPLQK Trigger: TTTTTGAAGTGGCGATGGATAGCTTTGTGATGACAAGTTCAAAGTCAGCTGAAACGTACAAGAAGAGCCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 90 bp | GCAGGGCCTCGATCAGGGGCTGTACCTGGTAGAAGTCGGCTTCCCTaGGCAGCAGACCCATCTCCTGGAAGTCCTCTGGCAGATCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AGPRSGAVPGRSRLP*AADPSPGSPLADPG Trigger: ACCTGGATCTGCCAGAGGACTTCCAGGAGATGGGTCTGCTGCGCAGGGAAGCCGACTTCTACCAGGTACAGCCCCTGATCGAGGCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 90 bp | GGCGTTGAACACCTCCATGCTGGAAGACGACAGGCTGTAGATCTGTaGTGCCTCCCGCACGGTGAAGTGGACCGTCTGCACGCGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GVEHLHAGRRQAVDL*CLPHGEVDRLHALL Trigger: AAGCAGCGCGTGCAGACGGTCCACTTCACCGTGCGGGAGGCACCACAGATCTACAGCCTGTCGTCTTCCAGCATGGAGGTGTTCAACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 90 bp | GTTGAACACCTCCATGCTGGAAGACGACAGGCTGTAGATCTGTGGTaGCTCCCGCACGGTGAAGTGGACCGTCTGCACGCGCTGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: VEHLHAGRRQAVDLW*LPHGEVDRLHALLQ Trigger: CTGAAGCAGCGCGTGCAGACGGTCCACTTCACCGTGCGGGAGGCACCACAGATCTACAGCCTGTCGTCTTCCAGCATGGAGGTGTTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 90 bp | ATCTGTGGTGCCTCCCGCACGGTGAAGTGGACCGTCTGCACGCGCTaGTTCAGGGTGATGTTAAGCATGGCATTCTTCTCCGCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: ICGASRTVKWTVCTR*FRVMLSMAFFSALE Trigger: CTCCAAGGCGGAGAAGAATGCCATGCTTAACATCACCCTGAAGCAGCGCGTGCAGACGGTCCACTTCACCGTGCGGGAGGCACCACAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR CAA 90 bp | TGCTCTCTTAAGAGAAGTGTTGGGGCTGGCCAGTTACTCAGGGGCCCTGGGATTGGAAGGCCTTCCACATaGGCTACCCAGTCAAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: CSLKRSVGAGQLLRGPGIGRPST*ATQSRV Trigger: GACTCTTGACTGGGTAGCCAATGTGGAAGGCCTTCC...AATCCCAGGGCCCCTGAGTAACTGGCCAGCCCCAACACTTCTCTTAAGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 90 bp | GCGATCTTCAGCACCTCCTCCACAAAGACCTGGAAGCTGTTGATCTaGTTGTTGGCAGGGACCACCCACAGCCTTTTCAGGTTCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: AIFSTSSTKTWKLLI*LLAGTTHSLFRFCL Trigger: CAAGCAGAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTGAAGATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 90 bp | TCCTCTGGAAGGCCTTCCACATTGGCTACCCAGTCAAGAGTCAGATaGTTAGGGTCCTGCAAGTGGCTGGTGATGGAGGAGAGATTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SSGRPSTLATQSRVR*LGSCKWLVMEERLP Trigger: TGGCAATCTCTCCTCCATCACCAGCCACTTGCAGGACCCTAACCATCTGACTCTTGACTGGGTAGCCAATGTGGAAGGCCTTCCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 90 bp | AACCCATCACTCAGAGCGATCTTCAGCACCTCCTCCACAAAGACCTaGAAGCTGTTGATCTGCTTGTTGGCAGGGACCACCCACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: NPSLRAIFSTSSTKT*KLLICLLAGTTHSL Trigger: AAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTGAAGATCGCTCTGAGTGATGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR CAA 90 bp | GGGACTGGACAGTACGACAAGGAAGACTGCTCTCTTAAGAGAAGTGTTGGGGCTCTGTTGATCTGCTTGTaGGCAGGGACCACCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: GTGQYDKEDCSLKRSVGALLICL*AGTTHS Trigger: GCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAG...AGCCCCAACACTTCTCTTAAGAGAGCAGTCTTCCTTGTCGTACTGTCCAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS TCA 90 bp | TCAGAGCGATCTTCAGCACCTCCTCCACAAAGACCTGGAAGCTGTTaGTCTGCTTGTTGGCAGGGACCACCCACAGCCTTTTCAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SERSSAPPPQRPGSC*SACWQGPPTAFSGS Trigger: AGAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTGAAGATCGCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 90 bp | TTGATCTGCTTGTTGGCAGGGACCACCCACAGCCTTTTCAGGTTCTaGTTGGTGTACTCTTCCTCTGGAAGGCCTTCCACATTGGCTACC | + |
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Preference number: 5 (lower is better) Translates to: LICLLAGTTHSLFRF*LVYSSSGRPSTLAT Trigger: GGTAGCCAATGTGGAAGGCCTTCCAGAGGAAGAGTACACCAAGCAGAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR CAA 90 bp | TGTAACTCTGGAAGCCCTTTGCTCTGTCCACCTGTGGATGCGGGCTCCAGGCTTGCATTCTTCTCCGCCTaGGAGAGTTCTACCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: CNSGSPLLCPPVDAGSRLAFFSA*ESSTSF Trigger: AAAAGAGGTAGAACTCTCCAAGGCGGAGAAGAATGC...AAGCCTGGAGCCCGCATCCACAGGTGGACAGAGCAAAGGGCTTCCAGAGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 90 bp | GACCACCCACAGCCTTTTCAGGTTCTGCTTGGTGTACTCTTCCTCTaGAAGGCCTTCCACATTGGCTACCCAGTCAAGAGTCAGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: DHPQPFQVLLGVLFL*KAFHIGYPVKSQMV Trigger: AACCATCTGACTCTTGACTGGGTAGCCAATGTGGAAGGCCTTCCAGAGGAAGAGTACACCAAGCAGAACCTGAAAAGGCTGTGGGTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTCAGGCAACAGCTGGATCACGAAGTGTCTTCCATCTTCTTGGCTTCGGGAAGCTGGTCAGGGTaGCCAGTGAGGTTGTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TEVRQQLDHEVSSIFLASGSWSG*PVRLCR Trigger: TCTACACAACCTCACTGGCAACCCTGACCAGCTTCC...CGAAGCCAAGAAGATGGAAGACACTTCGTGATCCAGCTGTTGCCTGACTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR CAA 90 bp | AAGACAGCCACACAGAGACTCCTGAGTCCCACTATAGGGAGAGAAAGGCCTTTACTGAAGATGTTGGCGTaGAACACCTCCATGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: KTATQRLLSPTIGRERPLLKMLA*NTSMLE Trigger: TTCCAGCATGGAGGTGTTCAACGCCAACATCTTCAG...TAAAGGCCTTTCTCTCCCTATAGTGGGACTCAGGAGTCTCTGTGTGGCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS-3UTR CAA 90 bp | GAAAGACGTCTGGCTTACAAAGATGGAAAGGAGCTGATTCTGATAAAGCCAAGTAAGCTGTTGATCTGCTaGTTGGCAGGGACCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: ERRLAYKDGKELILIKPSKLLIC*LAGTTH Trigger: GTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTT...ACTTGGCTTTATCAGAATCAGCTCCTTTCCATCTTTGTAAGCCAGACGTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 90 bp | ATTAACCGAATGATCTTATTGTTCATGAAGTCCAGAGCGTGTGGGTaGGAAGAGTCAATGCAGAACCCATCACTCAGAGCGATCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: INRMILLFMKSRACG*EESMQNPSLRAIFS Trigger: GCTGAAGATCGCTCTGAGTGATGGGTTCTGCATTGACTCTTCCCACCCACACGCTCTGGACTTCATGAACAATAAGATCATTCGGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 72 bp | CTCCATGCTGGAAGACGACAGGCTGTAGATCTGTGGTaGCTCCCGCACGGTGAAGTGGACCGTCTGCACGCG | + |
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Preference number: 6 (lower is better) Translates to: LHAGRRQAVDLW*LPHGEVDRLHA Trigger: CGCGTGCAGACGGTCCACTTCACCGTGCGGGAGGCACCACAGATCTACAGCCTGTCGTCTTCCAGCATGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 72 bp | CGATCAGGGGCTGTACCTGGTAGAAGTCGGCTTCCCTaGGCAGCAGACCCATCTCCTGGAAGTCCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RSGAVPGRSRLP*AADPSPGSPLA Trigger: TGCCAGAGGACTTCCAGGAGATGGGTCTGCTGCGCAGGGAAGCCGACTTCTACCAGGTACAGCCCCTGATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 72 bp | CACCTCCATGCTGGAAGACGACAGGCTGTAGATCTGTaGTGCCTCCCGCACGGTGAAGTGGACCGTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: HLHAGRRQAVDL*CLPHGEVDRLH Trigger: GTGCAGACGGTCCACTTCACCGTGCGGGAGGCACCACAGATCTACAGCCTGTCGTCTTCCAGCATGGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 72 bp | GCCTCCCGCACGGTGAAGTGGACCGTCTGCACGCGCTaGTTCAGGGTGATGTTAAGCATGGCATTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASRTVKWTVCTR*FRVMLSMAFFS Trigger: GGAGAAGAATGCCATGCTTAACATCACCCTGAAGCAGCGCGTGCAGACGGTCCACTTCACCGTGCGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 72 bp | ATCTGTGGTGCCTCCCGCACGGTGAAGTGGACCGTCTaGACGCGCTGCTTCAGGGTGATGTTAAGCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: ICGASRTVKWTV*TRCFRVMLSMA Trigger: TGCCATGCTTAACATCACCCTGAAGCAGCGCGTGCAGACGGTCCACTTCACCGTGCGGGAGGCACCACAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS GCA 72 bp | AGCACCTCCTCCACAAAGACCTGGAAGCTGTTGATCTaGTTGTTGGCAGGGACCACCCACAGCCTTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: STSSTKTWKLLI*LLAGTTHSLFR Trigger: CCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 72 bp | AGGCCTTCCACATTGGCTACCCAGTCAAGAGTCAGATaGTTAGGGTCCTGCAAGTGGCTGGTGATGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RPSTLATQSRVR*LGSCKWLVMEE Trigger: CTCCTCCATCACCAGCCACTTGCAGGACCCTAACCATCTGACTCTTGACTGGGTAGCCAATGTGGAAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 72 bp | CTCAGAGCGATCTTCAGCACCTCCTCCACAAAGACCTaGAAGCTGTTGATCTGCTTGTTGGCAGGGACCACC | + |
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Preference number: 6 (lower is better) Translates to: LRAIFSTSSTKT*KLLICLLAGTT Trigger: GGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTGAAGATCGCTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CAA 90 bp | CTCAGAGCGATCTTCAGCACCTCCTCCACAAAGACCTGGAAGCTGTaGATCTGCTTGTTGGCAGGGACCACCCACAGCCTTTTCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LRAIFSTSSTKTWKL*ICLLAGTTHSLFRF Trigger: GAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTGAAGATCGCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CAA 72 bp | TCCTCCACAAAGACCTGGAAGCTGTTGATCTGCTTGTaGGCAGGGACCACCCACAGCCTTTTCAGGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSTKTWKLLICL*AGTTHSLFRFC Trigger: GCAGAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CAA 72 bp | ACCTCCTCCACAAAGACCTGGAAGCTGTTGATCTGCTaGTTGGCAGGGACCACCCACAGCCTTTTCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: TSSTKTWKLLIC*LAGTTHSLFRF Trigger: GAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CAA 90 bp | TTCAGCACCTCCTCCACAAAGACCTGGAAGCTGTTGATCTGCTTGTaGGCAGGGACCACCCACAGCCTTTTCAGGTTCTGCTTGGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FSTSSTKTWKLLICL*AGTTHSLFRFCLVY Trigger: GTACACCAAGCAGAACCTGAAAAGGCTGTGGGTGGTCCCTGCCAACAAGCAGATCAACAGCTTCCAGGTCTTTGTGGAGGAGGTGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CAA 90 bp | TTCAGGTTCTGCTTGGTGTACTCTTCCTCTGGAAGGCCTTCCACATaGGCTACCCAGTCAAGAGTCAGATGGTTAGGGTCCTGCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FRFCLVYSSSGRPST*ATQSRVRWLGSCKW Trigger: CCACTTGCAGGACCCTAACCATCTGACTCTTGACTGGGTAGCCAATGTGGAAGGCCTTCCAGAGGAAGAGTACACCAAGCAGAACCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 72 bp | ATGATCTTATTGTTCATGAAGTCCAGAGCGTGTGGGTaGGAAGAGTCAATGCAGAACCCATCACTCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: MILLFMKSRACG*EESMQNPSLRA Trigger: CGCTCTGAGTGATGGGTTCTGCATTGACTCTTCCCACCCACACGCTCTGGACTTCATGAACAATAAGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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| CDS CCA 72 bp | CCGAATGATCTTATTGTTCATGAAGTCCAGAGCGTGTaGGTGGGAAGAGTCAATGCAGAACCCATCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: PNDLIVHEVQSV*VGRVNAEPITQ Trigger: CTGAGTGATGGGTTCTGCATTGACTCTTCCCACCCACACGCTCTGGACTTCATGAACAATAAGATCATTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054107.6 |
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