Pregenerated sensors for KCTD20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005936Ensembl transcript IDs: ENSMUST00000057174.16, ENSMUST00000117672.9, ENSMUST00000118762.9, ENSMUST00000122163.9, ENSMUST00000150858.2, ENSMUST00000153462.8, ENSMUST00000153831.9, ENSMUST00000168507.2, ENSMUST00000232729.2, ENSMUST00000232772.2, ENSMUST00000232874.2, ENSMUST00000233064.2, ENSMUST00000233145.2, ENSMUST00000233197.2, ENSMUST00000233334.2, ENSMUST00000233847.2
Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTaGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EASPNGEKPQEGREA*LGVPTQRRAPTTGQ Trigger: CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
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| 3UTR CCA 90 bp | TCAGTTCCTCGAGGTAGTGGTCAAACTGCTTGTGGGCACCATCGTTaGAGAGCTCGTGCAGTAGAGCACCAGGACTGTGCGGAACACGGT | + |
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Preference number: 1 (lower is better) Translates to: SVPRGSGQTACGHHR*RARAVEHQDCAEHG Trigger: ACCGTGTTCCGCACAGTCCTGGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGACCACTACCTCGAGGAACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233847.2 |
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| 3UTR CCA 90 bp | TACCATGTTCCAGTAGCTAATGGCCTATTTAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGGTCCAGCTGGCCCAATCTGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: YHVPVANGLFNGQAL*LPTRGGSSWPNLEP Trigger: TGGCTCCAGATTGGGCCAGCTGGACCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATTAAATAGGCCATTAGCTACTGGAACATGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR GCA 90 bp | TCCTTTAGTTGCCACCACCCAGTGTCACTGGAGTGGCCTTTAGATTaGCTCCCAGTCAAACTCCATGGGCTGGAGTGTTGGGGTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: SFSCHHPVSLEWPLD*LPVKLHGLECWGED Trigger: GTCTTCACCCCAACACTCCAGCCCATGGAGTTTGACTGGGAGGCAATCTAAAGGCCACTCCAGTGACACTGGGTGGTGGCAACTAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR TCA 90 bp | CGACAATGTGACACTCTCGCTCGCCTTTCTTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCTCGAGGTAGTGGTCAAACTGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: RQCDTLARLSWHSPP*WAESVPRGSGQTAC Trigger: ACAAGCAGTTTGACCACTACCTCGAGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGAGTGTCACATTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| 3UTR GCA 90 bp | GGAGGGTCCAGCTGGCCCAATCTGGAGCCATTCTGCCACCTCATTTaGAAGTTTCACTTCCAAATGAAGCATCAGGCTGCCCTTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GGSSWPNLEPFCHLI*KFHFQMKHQAALLR Trigger: CCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAATGGCTCCAGATTGGGCCAGCTGGACCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR TCA 90 bp | GCCGAATGTGAGGCAACAGTTCACTTCCTCTCCTGCACCAGGAGGTaGATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTCGTT | + |
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Preference number: 1 (lower is better) Translates to: AECEATVHFLSCTRR*MQRFNQEHQTQKLV Trigger: AACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAGAGGAAGTGAACTGTTGCCTCACATTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
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| 3UTR TCA 90 bp | CCTGGCCTCAAACACAAGCCAAGCAACTTCACAGAAGTAACCTCTTaGTACAGACAACCTCAGCCCATATTCTGGATGCTGCCTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: PGLKHKPSNFTEVTS*YRQPQPIFWMLPHR Trigger: TCTGTGAGGCAGCATCCAGAATATGGGCTGAGGTTGTCTGTATCAAGAGGTTACTTCTGTGAAGTTGCTTGGCTTGTGTTTGAGGCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR TCA 90 bp | AGAGCACACTTGTTCTTCAATACTGGAGAGAGGGCTTCCAAAACCTaGTTTTATTGCCATCAAGTAGTTATGCTATACATGGTCTTATGG | + |
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Preference number: 1 (lower is better) Translates to: RAHLFFNTGERASKT*FYCHQVVMLYMVLW Trigger: CCATAAGACCATGTATAGCATAACTACTTGATGGCAATAAAATCAGGTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAGTGTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCAGGTGTCCTGCACCAGGAGGTaGATGCAAAGATTCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: AELELQGIPFACPAPPQVSCTRR*MQRFNQ Trigger: TTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGA...CACCTGGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCAGCTGGCCCAATCTaGAGCCATTCTGCCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: KSRAELELQGIPFACPAPPAGPI*SHSATS Trigger: TGAGGTGGCAGAATGGCTCCAGATTGGGCCAGCTGG...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTAAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KSTRPKSSFARAGKAGRLNGQAL*LPTRGG Trigger: CCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATT...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTACAGCCATGGAAATGTaGGAGGAAGGAGCTAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: KSRAELELQGIPFACPAPTAMEM*EEGARE Trigger: TTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGT...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGGGCGCTGCACATAATTGTAGATGACTTCAGACCGCCCGCCAGGTCTCCTCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: KRALHIIVDDFRPPARSPLFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...AGGAGACCTGGCGGGCGGTCTGAAGTCATCTACAATTATGTGCAGCGCCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTTCCTGCACCAGGAGGTaGATGCAAAGATTCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: KSRAELELQGIPFACPAPSCTRR*MQRFNQ Trigger: TTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGA...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCAGTAAAAAGCAGAGCTaGGCTGGAGCTCCAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: TKSTRPKSSFARAGKAGRSKKQS*AGAPGN Trigger: ATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTTTACT...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTACAGAAGTAACCTCTTaGTACAGACAACCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KSRAELELQGIPFACPAPTEVTS*YRQPQP Trigger: GGGCTGAGGTTGTCTGTATCAAGAGGTTACTTCTGT...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | CTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGGAGTACCCTGGGCCTGGGCTaGACAGCTGCAGGTAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LCLHTVFPLVATTQCHWSTLGLG*TAAGRQ Trigger: TTGCCTACCTGCAGCTGTCCAGCCCAGGCCCAGGGT...ACTCCAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LHQEVNAKIQPRAPDPKANGQAL*LPTRGG Trigger: CCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATT...AGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KPMSAHSLSFSCHHPVSLNGQAL*LPTRGG Trigger: CCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATT...CAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | CTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGGAGTAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LCLHTVFPLVATTQCHWSNGQAL*LPTRGG Trigger: CCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATT...ACTCCAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTATCCTGCACCAGGAGGTaGATGCAAAGATTCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: KSTRPKSSFARAGKAGRLSCTRR*MQRFNQ Trigger: TTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGA...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTAGCACCAGGAGGTGAATaGAAAGATTCAACCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KSTRPKSSFARAGKAGRLAPGGE*KDSTKS Trigger: GCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGC...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TKSTRPKSSFARAGKAGRNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233847.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGGAAATGTGAGAGGAAGGAGCTAGGGAATGATCTGGGCTGCCGTCTACCAAAAGCAGAGCTGAGCTaGAGCTCCAGGGAATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PWKCERKELGNDLGCRLPKAELS*SSREFP Trigger: AGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTT...TGGTAGACGGCAGCCCAGATCATTCCCTAGCTCCTTCCTCTCACATTTCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR CAA 90 bp | GGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTaGTCCCTAATCTTGAAAGTCATTCGGAGCCATCTGAGAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GYPHKEELQQLGRGR*SLILKVIRSHLREW Trigger: CCACTCTCTCAGATGGCTCCGAATGACTTTCAAGATTAGGGACAAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTGCACCAGGAGGTGAATaGAAAGATTCAACCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LVRGTHTKKSSNNWAEAVAPGGE*KDSTKS Trigger: GCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGC...AACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCTTAGGGGGTTGGTTTaGTCCTATGTTAGTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: KSRAELELQGIPFACPAPLRGLV*SYVSKK Trigger: CTTTTTACTAACATAGGAGCAAACCAACCCCCTAAG...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTATTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: KSTRPKSSFARAGKAGRLFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233847.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCATGGAAATGTGAGAGGAAGGAGCTAGGGAATGATCTGGGCTGCCGTCTATCCTGCACCAGGAGGTaGATGCAAAGATTCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: QPWKCERKELGNDLGCRLSCTRR*MQRFNQ Trigger: TTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGA...TAGACGGCAGCCCAGATCATTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTTGGCTCTGCAAACAGCCATGGAAATGTGAGAGGAAGGAGCTAGGGAATAGTAAAAAGCAGAGCTaGGCTGGAGCTCCAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: GSWLCKQPWKCERKELGNSKKQS*AGAPGN Trigger: ATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTTTACT...ATTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGTTTGCAGAGCCAAGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCCTCCCCACAAGAAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCACAGCCATGGAAATGTaGGAGGAAGGAGCTAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SFPPHKKPMSAHSLSFSCTAMEM*EEGARE Trigger: TTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGT...GCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTTCTTGTGGGGAGGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCGCCAGGTCTCCTCTTGATCTTCTCTTTACAGGTAGGGTAACCTTCAATGCACCAGGAGGTGAATaGAAAGATTCAACCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPARSPLDLLFTGRVTFNAPGGE*KDSTKS Trigger: GCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGC...ATTGAAGGTTACCCTACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGGGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233847.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCCCTCCCCACAAGAAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCAGCCCATATTCTGGATaGTGCCTCACAGACACACCA | + |
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Preference number: 2 (lower is better) Translates to: SFPPHKKPMSAHSLSFSCSPYSG*CLTDTP Trigger: TGGTGTGTCTGTGAGGCAGCATCCAGAATATGGGCT...GCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTTCTTGTGGGGAGGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: AGGRPGKGHSNNSEGKETRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| 3UTR CAA 90 bp | ACCTGGCCTCAAACACAAGCCAAGCAACTTCACAGAAGTAACCTCTaGATACAGACAACCTCAGCCCATATTCTGGATGCTGCCTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: TWPQTQAKQLHRSNL*IQTTSAHILDAASQ Trigger: CTGTGAGGCAGCATCCAGAATATGGGCTGAGGTTGTCTGTATCAAGAGGTTACTTCTGTGAAGTTGCTTGGCTTGTGTTTGAGGCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAATCCTGCACCAGGAGGTaGATGCAAAGATTCAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKSCTRR*MQRFNQ Trigger: TTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGA...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGGAAATGCCGGCCCAAACATCCTaGAAGACACCAGCAACAACA | + |
|
Preference number: 2 (lower is better) Translates to: IIADIAVRLLALQTAMEMPAQTS*KTPATT Trigger: TGTTGTTGCTGGTGTCTTTCAGGATGTTTGGGCCGG...CATTTCCATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122163.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCGGTCAAGTTCATCTACTTGTGGTGGGTGATGCATTATTATCTCCTGGTCTTTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SGQVHLLVVGDALLSPGLWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...AAGACCAGGAGATAATAATGCATCACCCACCACAAGTAGATGAACTTGACCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCACTTCCAAATGAAGCATCAGGCTGCCCTTCTTAGGGGGTTGGTTTGCTCCGCACCAGGAGGTGAATaGAAAGATTCAACCAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FHFQMKHQAALLRGLVCSAPGGE*KDSTKS Trigger: GCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGC...GGAGCAAACCAACCCCCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCTTCTGCCACCTCATTTaGAAGTTTCACTTCCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: KGRRQEEASPNGEKPQEGFCHLI*KFHFQM Trigger: CATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAA...GCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCAGGTAGGCAACCATGTAGCACCAACAAAATCAAAGCCAGACCTGGCCTCCTATACATGGTCTTATaGGAGCAGCCTTCAAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: AAGRQPCSTNKIKARPGLLYMVL*EQPSRN Trigger: GTTTCTTGAAGGCTGCTCCCATAAGACCATGTATAG...GAGGCCAGGTCTGGCTTTGATTTTGTTGGTGCTACATGGTTGCCTACCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTACACAGGACAGACACATAATCATTCCTGTGGCCATGGAGAAACAGGAAGCCCTCAGCCCATATTCTaGATGCTGCCTCACAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: HYTGQTHNHSCGHGETGSPQPIF*MLPHRH Trigger: GTGTCTGTGAGGCAGCATCCAGAATATGGGCTGAGG...GCTTCCTGTTTCTCCATGGCCACAGGAATGATTATGTGTCTGTCCTGTGTAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: LHQEVNAKIQPRAPDPKAFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...AGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122163.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233847.2 |
||
| 3UTR CAA 90 bp | ACACCCAACCCCAGCACAGACTGTTTCTCTGACGTTTTGGTCCTTTaGCTAATAAGCAATTTGTCTGATTGTGAAACCACTCACCCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TPNPSTDCFSDVLVL*LISNLSDCETTHPV Trigger: CACCGGGTGAGTGGTTTCACAATCAGACAAATTGCTTATTAGCAAAAGGACCAAAACGTCAGAGAAACAGTCTGTGCTGGGGTTGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CAA 90 bp | CAGGTGGGCACACCCAACCCCAGCACAGACTGTTTCTCTGACGTTTaGGTCCTTTTGCTAATAAGCAATTTGTCTGATTGTGAAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: QVGTPNPSTDCFSDV*VLLLISNLSDCETT Trigger: AGTGGTTTCACAATCAGACAAATTGCTTATTAGCAAAAGGACCAAAACGTCAGAGAAACAGTCTGTGCTGGGGTTGGGTGTGCCCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGAGGTGTAAAGTCACCTTTCTCATCAGACTTTCTATGCACATAGCCCAGAGTAAAAAGCAGAGCTaGGCTGGAGCTCCAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TLRCKVTFLIRLSMHIAQSKKQS*AGAPGN Trigger: ATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTTTACT...CTGGGCTATGTGCATAGAAAGTCTGATGAGAAAGGTGACTTTACACCTCAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGAGGTGTAAAGTCACCTTTCTCATCAGACTTTCTATGCACATAGCCCAGACAGCCATGGAAATGTaGGAGGAAGGAGCTAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TLRCKVTFLIRLSMHIAQTAMEM*EEGARE Trigger: TTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGT...CTGGGCTATGTGCATAGAAAGTCTGATGAGAAAGGTGACTTTACACCTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR GCA 90 bp | CTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGGAGTAATAATTGCAGACATTaGTGTCAGGCTCTTGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LCLHTVFPLVATTQCHWSNNCRH*CQALGS Trigger: AGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATT...ACTCCAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTTAAGAGCACACTTGTTCTTCAATACTGGAGAGAGGGCTTCCAAAACCTGTTGCTGTCAGGCTCTTaGCTCTGCAAACAGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: CFKSTLVLQYWREGFQNLLLSGS*LCKQPW Trigger: CCATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAA...CAGGTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAGTGTGCTCTTAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTCCCTCCCCACAAGAAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCCTTGTTCTTCAATACTaGAGAGAGGGCTTCCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFPPHKKPMSAHSLSFSCLVLQY*REGFQN Trigger: GTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAG...GCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTTCTTGTGGGGAGGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTTTCTGCCACCTCATTTaGAAGTTTCACTTCCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: LHQEVNAKIQPRAPDPKAFCHLI*KFHFQM Trigger: CATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAA...AGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR GCA 90 bp | TACACAGGACAGACACATAATCATTCCTGTGGCCATGGAGAAACAGGAAGCACCAATAATTGCAGACATTaGTGTCAGGCTCTTGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YTGQTHNHSCGHGETGSTNNCRH*CQALGS Trigger: AGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATT...GGTGCTTCCTGTTTCTCCATGGCCACAGGAATGATTATGTGTCTGTCCTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | CATCAGACTTTCTATGCACATAGCCCAGCTTACTTATTCAGGCACTTACAAAAGAAAGCAGAGCTGAGCTaGAGCTCCAGGGAATTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HQTFYAHSPAYLFRHLQKKAELS*SSREFP Trigger: AGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTT...CTTTTGTAAGTGCCTGAATAAGTAAGCTGGGCTATGTGCATAGAAAGTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DDHILLSYHVPVANGLFNNGQAL*LPTRGG Trigger: CCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATT...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACAAGCACAGAAAACACTGTTTTAAGAGCACACTTGTTCTTCAATACTGGATTGCTGTCAGGCTCTTaGCTCTGCAAACAGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: ATSTENTVLRAHLFFNTGLLSGS*LCKQPW Trigger: CCATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAA...TCCAGTATTGAAGAACAAGTGTGCTCTTAAAACAGTGTTTTCTGTGCTTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR GCA 90 bp | TACACAGGACAGACACATAATCATTCCTGTGGCCATGGAGAAACAGGAAGCACCTTCTGCCACCTCATTTaGAAGTTTCACTTCCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: YTGQTHNHSCGHGETGSTFCHLI*KFHFQM Trigger: CATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAA...GGTGCTTCCTGTTTCTCCATGGCCACAGGAATGATTATGTGTCTGTCCTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACATTTTGCCCTTAGGAGAAAACCTAATTCTCCAGAATGATTCATTCCCTAAAGCAGAGCTGAGCTaGAGCTCCAGGGAATTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: THILPLGENLILQNDSFPKAELS*SSREFP Trigger: AGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTT...AGGGAATGAATCATTCTGGAGAATTAGGTTTTCTCCTAAGGGCAAAATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118762.9 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATCCAGCTGGCCCAATCTaGAGCCATTCTGCCACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DDHILLSYHVPVANGLFNPAGPI*SHSATS Trigger: TGAGGTGGCAGAATGGCTCCAGATTGGGCCAGCTGG...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACATTTTGCCCTTAGGAGAAAACCTAATTCTCCAGAATGATTCATTCCCTCCAGTGTCACTGGAGTaGCCTTTAGATTGCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: THILPLGENLILQNDSFPPVSLE*PLDCLP Trigger: TGGGAGGCAATCTAAAGGCCACTCCAGTGACACTGG...AGGGAATGAATCATTCTGGAGAATTAGGTTTTCTCCTAAGGGCAAAATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118762.9 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR TCA 90 bp | ACACACATTTTGCCCTTAGGAGAAAACCTAATTCTCCAGAATGATTCATTCCCTAGTAAAAAGCAGAGCTaGGCTGGAGCTCCAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: THILPLGENLILQNDSFPSKKQS*AGAPGN Trigger: ATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTTTACT...AGGGAATGAATCATTCTGGAGAATTAGGTTTTCTCCTAAGGGCAAAATGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118762.9 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR CAA 90 bp | CTTGTTCTTCAATACTGGAGAGAGGGCTTCCAAAACCTGATTTTATaGCCATCAAGTAGTTATGCTATACATGGTCTTATGGGAGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LVLQYWREGFQNLIL*PSSSYAIHGLMGAA Trigger: GGCTGCTCCCATAAGACCATGTATAGCATAACTACTTGATGGCAATAAAATCAGGTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCTTGCACCCATTGTGATGCCACAAGCACAGAAAACACTGTTTTAAGAGCACTATACATGGTCTTATaGGAGCAGCCTTCAAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RSCTHCDATSTENTVLRALYMVL*EQPSRN Trigger: GTTTCTTGAAGGCTGCTCCCATAAGACCATGTATAG...TGCTCTTAAAACAGTGTTTTCTGTGCTTGTGGCATCACAATGGGTGCAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| 3UTR-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATCGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DDHILLSYHVPVANGLFNRVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122163.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTAATCTTGAAAGTCATTCGGAGCCATCTGAGAGAGTGGAGCATTTAAGCTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: VPNLESHSEPSERVEHLSCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...GCTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGACTTTCAAGATTAGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTAATCTTGAAAGTCATTCGGAGCCATCTGAGAGAGTGGAGCATTTAAGCTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: VPNLESHSEPSERVEHLSFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...GCTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGACTTTCAAGATTAGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| 3UTR-3UTR GCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATAATAATTGCAGACATTaGTGTCAGGCTCTTGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DDHILLSYHVPVANGLFNNNCRH*CQALGS Trigger: AGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATT...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATCTTGTTCTTCAATACTaGAGAGAGGGCTTCCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DDHILLSYHVPVANGLFNLVLQY*REGFQN Trigger: GTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAG...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR CCA 72 bp | CAGGCGCTGTGGCTTCCCACCAGAGGAGGGTCCAGCTaGCCCAATCTGGAGCCATTCTGCCACCTCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QALWLPTRGGSS*PNLEPFCHLIC Trigger: GCAAATGAGGTGGCAGAATGGCTCCAGATTGGGCCAGCTGGACCCTCCTCTGGTGGGAAGCCACAGCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CCA 72 bp | GAGAAACAGGAAGCACCACTGACCCTGGGCCTGGGCTaGACAGCTGCAGGTAGGCAACCATGTAGCACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: EKQEAPLTLGLG*TAAGRQPCSTN Trigger: GTTGGTGCTACATGGTTGCCTACCTGCAGCTGTCCAGCCCAGGCCCAGGGTCAGTGGTGCTTCCTGTTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTATCTCGCTCGCCTTTCTaGGCACAGCCCACCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: KSTRPKSSFARAGKAGRLSRSPF*AQPTMM Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGA...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233847.2 |
||
| 3UTR TCA 72 bp | CAGTCCACAGAGTCCTCGTCTGTCAGCACGACAATGTaGCACTCTCGCTCGCCTTTCTTGGCACAGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QSTESSSVSTTM*HSRSPFLAQPT Trigger: GGTGGGCTGTGCCAAGAAAGGCGAGCGAGAGTGTCACATTGTCGTGCTGACAGACGAGGACTCTGTGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| 3UTR GCA 72 bp | TCAAACTGCTTGTGGGCACCATCGTTGGAGAGCTCGTaGAGTAGAGCACCAGGACTGTGCGGAACACGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SNCLWAPSLESS*SRAPGLCGTRW Trigger: CCACCGTGTTCCGCACAGTCCTGGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233847.2 |
||
| 3UTR CCA 72 bp | CGAGGTAGTGGTCAAACTGCTTGTGGGCACCATCGTTaGAGAGCTCGTGCAGTAGAGCACCAGGACTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RGSGQTACGHHR*RARAVEHQDCA Trigger: CGCACAGTCCTGGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGACCACTACCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233847.2 |
||
| 3UTR GCA 72 bp | TGCCACCACCCAGTGTCACTGGAGTGGCCTTTAGATTaGCTCCCAGTCAAACTCCATGGGCTGGAGTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CHHPVSLEWPLD*LPVKLHGLECW Trigger: CCAACACTCCAGCCCATGGAGTTTGACTGGGAGGCAATCTAAAGGCCACTCCAGTGACACTGGGTGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR CCA 72 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTaGTTAGGGGTACCCACACAAAGAAGAGCTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PNGEKPQEGREA*LGVPTQRRAPT Trigger: TGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
||
| 3UTR CCA 72 bp | CCAGTAGCTAATGGCCTATTTAATGGACAGGCGCTGTaGCTTCCCACCAGAGGAGGGTCCAGCTGGCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PVANGLFNGQAL*LPTRGGSSWPN Trigger: ATTGGGCCAGCTGGACCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATTAAATAGGCCATTAGCTACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCGCCCTTCTTAGGGGGTaGGTTTGCTCCTATGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TKSTRPKSSFARAGKAGRALLRG*VCSYVS Trigger: ACTAACATAGGAGCAAACCAACCCCCTAAGAAGGGC...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR TCA 72 bp | GACACTCTCGCTCGCCTTTCTTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCTCGAGGTAGTGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: DTLARLSWHSPP*WAESVPRGSGQ Trigger: TTGACCACTACCTCGAGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| 3UTR CCA 72 bp | CGAGGTAGTGGTCAAACTGCTTGTGGGCACCATCGTTaGAGAGCTCGTGCAGTAGAGCACTCAGATCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RGSGQTACGHHR*RARAVEHSDPD Trigger: GTCAGGATCTGAGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGACCACTACCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 |
||
| 3UTR TCA 72 bp | GGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTaGGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLVCSYVSKKQS*AGAPGNSLRLP Trigger: GGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGAGCCCTTCTTAGGGGGTaGGTTTGCTCCTATGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GGRPGKGHSNNSEGKETGALLRG*VCSYVS Trigger: ACTAACATAGGAGCAAACCAACCCCCTAAGAAGGGC...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CCA 72 bp | GATTGCCTCCCAGTCAAACTCCATGGGCTGGAGTGTTaGGGTGAAGACCTAGTTCATAAAAGGCCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DCLPVKLHGLEC*GEDLVHKRPEP Trigger: TGGCTCTGGCCTTTTATGAACTAGGTCTTCACCCCAACACTCCAGCCCATGGAGTTTGACTGGGAGGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR CCA 72 bp | CTTTCCTTTAGTTGCCACCACCCAGTGTCACTGGAGTaGCCTTTAGATTGCCTCCCAGTCAAACTCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSFSCHHPVSLE*PLDCLPVKLHG Trigger: CCCATGGAGTTTGACTGGGAGGCAATCTAAAGGCCACTCCAGTGACACTGGGTGGTGGCAACTAAAGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTATTCTGCCACCTCATTaGCAAGTTTCACTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KSRAELELQGIPFACPAPILPPH*QVSLPN Trigger: ATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAAT...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTATTGCTGTCAGGCTCTaGGCTCTGCAAACAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: DSTKSTRPKSSFARAGKAIAVRL*ALQTAM Trigger: CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAAT...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGCCCTTCTTAGGGGGTaGGTTTGCTCCTATGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: DSTKSTRPKSSFARAGKAALLRG*VCSYVS Trigger: ACTAACATAGGAGCAAACCAACCCCCTAAGAAGGGC...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTCCCTCCCCACAAGAAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCATTGCTGTCAGGCTCTaGGCTCTGCAAACAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SFPPHKKPMSAHSLSFSCIAVRL*ALQTAM Trigger: CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAAT...GCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTTCTTGTGGGGAGGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR TCA 72 bp | TGCAATCCAGCCCTTGATTCTGCAAGGCCCCATCACTaGATAATTGGGACCAGACAGTGGCATGGAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: CNPALDSARPHH*IIGTRQWHGTP Trigger: AGGTGTTCCATGCCACTGTCTGGTCCCAATTATTCAGTGATGGGGCCTTGCAGAATCAAGGGCTGGATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR GCA 72 bp | AGAGGAGGGTCCAGCTGGCCCAATCTGGAGCCATTCTaGCACCTCATTTGCAAGTTTCACTTCCAAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGGSSWPNLEPF*HLICKFHFQMK Trigger: CTTCATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAATGGCTCCAGATTGGGCCAGCTGGACCCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTAATTCTGCCACCTCATTaGCAAGTTTCACTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KSTRPKSSFARAGKAGRLILPPH*QVSLPN Trigger: ATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAAT...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTAGGCCTGGACCTGATTaGGGGGATGACCACATATTA | + |
|
Preference number: 3 (lower is better) Translates to: LHQEVNAKIQPRAPDPKARPGPD*GDDHIL Trigger: TAATATGTGGTCATCCCCCAAATCAGGTCCAGGCCT...AGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR GCA 72 bp | CAACAGTTCACTTCCTCTCCTGCACCAGGAGGTGAATaGAAAGATTCAACCAAGAGCACCAGACCCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QQFTSSPAPGGE*KDSTKSTRPKS Trigger: GCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAGAGGAAGTGAACTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
||
| 3UTR GCA 72 bp | CCAGTGAACCAACTCCGAAGGACAAAGAAAGGACCGTaGTCACACCTGAGCATTACACAGGACAGACACATA | + |
|
Preference number: 3 (lower is better) Translates to: PVNQLRRTKKGP*SHLSITQDRHI Trigger: TATGTGTCTGTCCTGTGTAATGCTCAGGTGTGAGCACGGTCCTTTCTTTGTCCTTCGGAGTTGGTTCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGACGTTTTGGTCCTTTaGCTAATAAGCAATTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AGGRPGKGHSNNSEGKETDVLVL*LISNLS Trigger: AGACAAATTGCTTATTAGCAAAAGGACCAAAACGTC...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 ENSMUST00000233847.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGAATTCTGCCACCTCATTaGCAAGTTTCACTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GGRPGKGHSNNSEGKETGILPPH*QVSLPN Trigger: ATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAAT...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTACACAGGACAGACACATAATCATTCCTGTGGCCATGGAGAAACAGGAAGCATTGCTGTCAGGCTCTaGGCTCTGCAAACAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: HYTGQTHNHSCGHGETGSIAVRL*ALQTAM Trigger: CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAAT...GCTTCCTGTTTCTCCATGGCCACAGGAATGATTATGTGTCTGTCCTGTGTAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR TCA 72 bp | TCGTTGGAGAGCTCGTGCAGTAGAGCACTCAGATCCTaGCATCGGATAGTGTTGAAGTCGAAGTTAATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLESSCSRALRS*HRIVLKSKLMQ Trigger: CTGCATTAACTTCGACTTCAACACTATCCGATGTCAGGATCTGAGTGCTCTACTGCACGAGCTCTCCAACGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233847.2 |
||
| 3UTR TCA 72 bp | CATTCTGCCACCTCATTTGCAAGTTTCACTTCCAAATaGAGCATCAGGCTGCCCTTCTTAGGGGGTTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HSATSFASFTSK*SIRLPFLGGWF Trigger: AAACCAACCCCCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAATATTCTGTAAAGAGCTaGAAGGAAACAGCTTACACA | + |
|
Preference number: 3 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKYSVKS*KETAYT Trigger: TGTGTAAGCTGTTTCCTTCAAGCTCTTTACAGAATA...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR TCA 72 bp | AAACACAAGCCAAGCAACTTCACAGAAGTAACCTCTTaGTACAGACAACCTCAGCCCATATTCTGGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KHKPSNFTEVTS*YRQPQPIFWML Trigger: CAGCATCCAGAATATGGGCTGAGGTTGTCTGTATCAAGAGGTTACTTCTGTGAAGTTGCTTGGCTTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR TCA 72 bp | CTGTTGATGGCCACCACAGAAACTTTCCACTTGAGTTaGAGCCTGTGCTCTGAACATTTATTTTCCCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLMATTETFHLS*SLCSEHLFSLA Trigger: TGCTAGGGAAAATAAATGTTCAGAGCACAGGCTTCAACTCAAGTGGAAAGTTTCTGTGGTGGCCATCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR GCA 72 bp | GTTACCCTTCGGTTCTTTTCTAAGCAAGGAAGATCTTaGACCCATTGTGATGCCACAAGCACAGAAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: VTLRFFSKQGRS*THCDATSTENT Trigger: AGTGTTTTCTGTGCTTGTGGCATCACAATGGGTGCAAGATCTTCCTTGCTTAGAAAAGAACCGAAGGGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR CCA 72 bp | GAGCAGATAACACAACAACAAGGCCTGGACCTGATTTaGGGGATGACCACATATTACTTTCTTACCATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: EQITQQQGLDLI*GMTTYYFLTMF Trigger: GAACATGGTAAGAAAGTAATATGTGGTCATCCCCCAAATCAGGTCCAGGCCTTGTTGTTGTGTTATCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CCA 72 bp | ACATTTATTTTCCCTAGCACACATATTCTGAGAAGATaGCCCTTCCTGGATTTCCTGCAGAGCATTCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TFIFPSTHILRR*PFLDFLQSILR Trigger: CCTGAGAATGCTCTGCAGGAAATCCAGGAAGGGCCATCTTCTCAGAATATGTGTGCTAGGGAAAATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGGACGTTTTGGTCCTTTaGCTAATAAGCAATTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLGGWFAPMLVKSRAELEDVLVL*LISNLS Trigger: AGACAAATTGCTTATTAGCAAAAGGACCAAAACGTC...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTTAAGAGCACACTTGTTCTTCAATACTGGAGAGAGGGCTTCCAAAACCTGATTCTGCCACCTCATTaGCAAGTTTCACTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CFKSTLVLQYWREGFQNLILPPH*QVSLPN Trigger: ATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAAT...CAGGTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAGTGTGCTCTTAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACAAGCACAGAAAACACTGTTTTAAGAGCACACTTGTTCTTCAATACTGGAATTCTGCCACCTCATTaGCAAGTTTCACTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ATSTENTVLRAHLFFNTGILPPH*QVSLPN Trigger: ATTTGGAAGTGAAACTTGCAAATGAGGTGGCAGAAT...TCCAGTATTGAAGAACAAGTGTGCTCTTAAAACAGTGTTTTCTGTGCTTGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR TCA 72 bp | CACAGAAACTTTCCACTTGAGTTGAAGCCTGTGCTCTaGACATTTATTTTCCCTAGCACACATATTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HRNFPLELKPVL*TFIFPSTHILR Trigger: TCTCAGAATATGTGTGCTAGGGAAAATAAATGTTCAGAGCACAGGCTTCAACTCAAGTGGAAAGTTTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR TCA 72 bp | TTGTTCTTCAATACTGGAGAGAGGGCTTCCAAAACCTaGTTTTATTGCCATCAAGTAGTTATGCTATACATG | + |
|
Preference number: 3 (lower is better) Translates to: LFFNTGERASKT*FYCHQVVMLYM Trigger: CATGTATAGCATAACTACTTGATGGCAATAAAATCAGGTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCAAGTGTCACCTTCTCTaGGGCTTGAGAGTGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AELSWSSREFPSPAPHLPKCHLL*GLRVSA Trigger: GGCGCTCACTCTCAAGCCCCAGAGAAGGTGACACTT...GGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCATGCGGAAGGCTTGCTaGCTGAGAGGCATAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AELSWSSREFPSPAPHLPMRKAC*LRGIVK Trigger: CTTGACTATGCCTCTCAGCCAGCAAGCCTTCCGCAT...GGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCCGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AELSWSSREFPSPAPHLPRLLPL*KHEPLL Trigger: CAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACG...GGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PNGEKPQEGREAWLGVPTLFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...TGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACATCTCCTAGGCAGCTaGGCTCTGGCTGCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PNGEKPQEGREAWLGVPTHLLGS*ALAAMT Trigger: GGTCATTGCAGCCAGAGCTCAGCTGCCTAGGAGATG...TGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCGTTTCCAAATCTCTCTaGCACAATGAAGGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AELSWSSREFPSPAPHLPVSKSL*HNEGLV Trigger: CACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAAC...GGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQEEASPNGEKPQEGREALFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...GGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGLFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | AGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGCATCTCCTAGGCAGCTaGGCTCTGGCTGCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RRQEEASPNGEKPQEGREHLLGS*ALAAMT Trigger: GGTCATTGCAGCCAGAGCTCAGCTGCCTAGGAGATG...CTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSTRPKSSFARAGKAGRPTLEA*ALVVFR Trigger: CCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGG...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | GGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACCCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGLVRGTHTKKSSNNPTLEA*ALVVFR Trigger: CCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGG...GTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | GACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRKRHLLTVRNHRRAGRPWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...AGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGGLVRGTHTKKSSNNWWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...CCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGATGCGGAAGGCTTGCTaGCTGAGAGGCATAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EASPNGEKPQEGREAWLGMRKAC*LRGIVK Trigger: CTTGACTATGCCTCTCAGCCAGCAAGCCTTCCGCAT...CCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | CCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCCGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAPDPKARLPGLVKLAARLLPL*KHEPLL Trigger: CAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACG...GGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTAAGTGTCACCTTCTCTaGGGCTTGAGAGTGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGKCHLL*GLRVSA Trigger: GGCGCTCACTCTCAAGCCCCAGAGAAGGTGACACTT...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | CTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVRGTHTKKSSNNWAEAVLFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...AACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | AAGGGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGRRQEEASPNGEKPQEGLFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...GCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRKRHLLTVRNHRRAGRPLPSFS*VAAKAS Trigger: TGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAG...AGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLGVPTQRRAPTTGQRPLPSFS*VAAKAS Trigger: TGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAG...CGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTACCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEASPNGEKPQEGREAWLPTLEA*ALVVFR Trigger: CCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGG...TAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAACGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGEKPQEGREAWLGVPTQRLLPL*KHEPLL Trigger: CAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACG...TTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTCGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGRVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RQEEASPNGEKPQEGREALLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...GGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCTTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GLVRGTHTKKSSNNWAEALLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...GGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCTTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSTRPKSSFARAGKAGRLLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACATCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNGEKPQEGREAWLGVPTSFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...TGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | CCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRAPDPKARLPGLVKLAASFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...GGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGAGAGCACTCAGATCCTaGCATCGGATAGTGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EASPNGEKPQEGREAWLGRALRS*HRIVLK Trigger: CTTCAACACTATCCGATGTCAGGATCTGAGTGCTCT...CCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | TCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STKSTRPKSSFARAGKAGWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...GCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR GCA 90 bp | GGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACCAGAGGACACCAAGCTaGTGCCTTCTTTCTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGLVRGTHTKKSSNNQRTPS*CLLSLE Trigger: CTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTG...GTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR CCA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAATGCGGAAGGCTTGCTaGCTGAGAGGCATAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRPGKGHSNNSEGKETMRKAC*LRGIVK Trigger: CTTGACTATGCCTCTCAGCCAGCAAGCCTTCCGCAT...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTACACACCGCCCAGGGTGGAGGACGGACTCAAAGGTGGACTTCTACCGGGTTTCCAAATCTCTCTaGCACAATGAAGGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLTHRPGWRTDSKVDFYRVSKSL*HNEGLV Trigger: CACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAAC...CCGGTAGAAGTCCACCTTTGAGTCCGTCCTCCACCCTGGGCGGTGTGTAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGAAAGTGTCACCTTCTCTaGGGCTTGAGAGTGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGKCHLL*GLRVSA Trigger: GGCGCTCACTCTCAAGCCCCAGAGAAGGTGACACTT...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGCGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLVRGTHTKKSSNNWAERVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...CTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACACGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRPGKGHSNNSEGKETRVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGTTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: REAWLGVPTQRRAPTTGQLLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AELSWSSREFPSPAPHLPCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...GGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCAGGTGTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
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Preference number: 4 (lower is better) Translates to: AELELQGIPFACPAPPQVFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...CACCTGGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: DSTKSTRPKSSFARAGKALFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR CAA 72 bp | TTGCCACCACCCAGTGTCACTGGAGTGGCCTTTAGATaGCCTCCCAGTCAAACTCCATGGGCTGGAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LPPPSVTGVAFR*PPSQTPWAGVL Trigger: CAACACTCCAGCCCATGGAGTTTGACTGGGAGGCAATCTAAAGGCCACTCCAGTGACACTGGGTGGTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTTGGCTCTGCAAACAGCCATGGAAATGTGAGAGGAAGGAGCTAGGGAATCATCTCCTAGGCAGCTaGGCTCTGGCTGCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: GSWLCKQPWKCERKELGNHLLGS*ALAAMT Trigger: GGTCATTGCAGCCAGAGCTCAGCTGCCTAGGAGATG...ATTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGTTTGCAGAGCCAAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | TGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTCCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLGVPTQRRAPTTGQRPFPTLEA*ALVVFR Trigger: CCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGG...AAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | CCATGGAAATGTGAGAGGAAGGAGCTAGGGAATGATCTGGGCTGCCGTCTACCACCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWKCERKELGNDLGCRLPPTLEA*ALVVFR Trigger: CCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGG...TGGTAGACGGCAGCCCAGATCATTCCCTAGCTCCTTCCTCTCACATTTCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACATTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PNGEKPQEGREAWLGVPTFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...TGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | GCTGCAGGTAGGCAACCATGTAGCACCAACAAAATCAAAGCCAGACCTGGCCTCTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AAGRQPCSTNKIKARPGLWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...GAGGCCAGGTCTGGCTTTGATTTTGTTGGTGCTACATGGTTGCCTACCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR GCA 90 bp | GAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTACAGAGGACACCAAGCTaGTGCCTTCTTTCTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: EEASPNGEKPQEGREAWLQRTPS*CLLSLE Trigger: CTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTG...TAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR GCA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACACAGAGGACACCAAGCTaGTGCCTTCTTTCTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRPGKGHSNNSEGKETQRTPS*CLLSLE Trigger: CTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTG...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR GCA 90 bp | CCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PRAPDPKARLPGLVKLAANLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...GGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR GCA 90 bp | TCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPNGEKPQEGREAWLGVPNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...GGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCCTTCTTTCTCTTGAGTaGCAGCTAAGGCCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVRGTHTKKSSNNWAEALLSLE*QLRPHL Trigger: GAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAG...GGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR CCA 90 bp | AACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAACTTCTTTCTCTTGAGTaGCAGCTAAGGCCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: NGEKPQEGREAWLGVPTQLLSLE*QLRPHL Trigger: GAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAG...TTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR CCA 90 bp | AAGGGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCCGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: KGRRQEEASPNGEKPQEGRLLPL*KHEPLL Trigger: CAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACG...GCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | CCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: PRAPDPKARLPGLVKLAAFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...GGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | AAAAGCAGAGCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: KSRAELELQGIPFACPAPFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...AGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGCTCTGCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: EASPNGEKPQEGREAWLGFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...CCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGTCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: GRRQEEASPNGEKPQEGRSFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...CCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGTCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: REAWLGVPTQRRAPTTGQSFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAAGAGCACTCAGATCCTaGCATCGGATAGTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: EEASPNGEKPQEGREAWLRALRS*HRIVLK Trigger: CTTCAACACTATCCGATGTCAGGATCTGAGTGCTCT...TAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGCTTCTTTCTCTTGAGTaGCAGCTAAGGCCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGLLSLE*QLRPHL Trigger: GAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAG...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR CCA 90 bp | AGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGTTTCCAAATCTCTCTaGCACAATGAAGGGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: RRQEEASPNGEKPQEGREVSKSL*HNEGLV Trigger: CACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAAC...CTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GGCTCTTGGCTCTGCAAACAGCCATGGAAATGTGAGAGGAAGGAGCTAGGGAATAAGTGTCACCTTCTCTaGGGCTTGAGAGTGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSWLCKQPWKCERKELGNKCHLL*GLRVSA Trigger: GGCGCTCACTCTCAAGCCCCAGAGAAGGTGACACTT...ATTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGTTTGCAGAGCCAAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | CCATGGAAATGTGAGAGGAAGGAGCTAGGGAATGATCTGGGCTGCCGTCTACCATTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PWKCERKELGNDLGCRLPLLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...TGGTAGACGGCAGCCCAGATCATTCCCTAGCTCCTTCCTCTCACATTTCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGCTCTTCCCCCATGGGTaGGGGGTGGTCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELLFPHG*GVVFIP Trigger: TGGGATGAAGACCACCCCCCACCCATGGGGGAAGAG...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| 3UTR CAA 72 bp | CTCCAACAACTGGGCAGAGGCCGTTTGTCCCTAATCTaGAAAGTCATTCGGAGCCATCTGAGAGAGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQQLGRGRLSLI*KVIRSHLREWS Trigger: GCTCCACTCTCTCAGATGGCTCCGAATGACTTTCAAGATTAGGGACAAACGGCCTCTGCCCAGTTGTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | TTTCACTTCCAAATGAAGCATCAGGCTGCCCTTCTTAGGGGGTTGGTTTGCTCCCCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHFQMKHQAALLRGLVCSPTLEA*ALVVFR Trigger: CCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGG...GGAGCAAACCAACCCCCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | CCAGCAACAACATCACCTTCTCCAGCGGGGCTCAGCAGAGGCAGCTCTCCTCTTTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PATTSPSPAGLSRGSSPLYPDEQ*KSEDLP Trigger: TGGTAAATCCTCAGATTTTCACTGCTCATCCGGATA...AAGAGGAGAGCTGCCTCTGCTGAGCCCCGCTGGAGAAGGTGATGTTGTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122163.9 |
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| CDS-3UTR TCA 90 bp | CCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PEADPEKGTVTTQKGRRQFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...CTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: REAWLGVPTQRRAPTTGQFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACATTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRPGKGHSNNSEGKETFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGTTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRRQEEASPNGEKPQEGRFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...CCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTATTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EEASPNGEKPQEGREAWLFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...TAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | AAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCCTATTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KSTRPKSSFARAGKAGRLFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...TAGGCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGATCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGSFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGAATCAGTTCCTCGAGGTAGTGGTCAAACTGCTTGTGGGCACCATCGTTCAGAGGACACCAAGCTaGTGCCTTCTTTCTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQNQFLEVVVKLLVGTIVQRTPS*CLLSLE Trigger: CTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTG...AACGATGGTGCCCACAAGCAGTTTGACCACTACCTCGAGGAACTGATTCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| CDS-3UTR GCA 90 bp | TGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTAGAGGCATAGTCAAGTaGAAGGTCTTCACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLGVPTQRRAPTTGQRPFRGIVK*KVFTPG Trigger: GCCAGGAGTGAAGACCTTGCACTTGACTATGCCTCT...AAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR GCA 90 bp | GCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTACCACAAAACGAGTaGCATCCACAAGAAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLGVPTQRRAPTTGQRPLPQNE*HPQEVS Trigger: TGACACTTCTTGTGGATGGCACTCGTTTTGTGGTAA...CGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGTTACCACAAAACGAGTaGCATCCACAAGAAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQGGLVRGTHTKKSSNNWLPQNE*HPQEVS Trigger: TGACACTTCTTGTGGATGGCACTCGTTTTGTGGTAA...CCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR GCA 90 bp | GCCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRPGKGHSNNSEGKETNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...TGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR GCA 90 bp | AGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRQEEASPNGEKPQEGRENLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...CTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GGCTCTTGGCTCTGCAAACAGCCATGGAAATGTGAGAGGAAGGAGCTAGGGAATCGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSWLCKQPWKCERKELGNRLLPL*KHEPLL Trigger: CAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACG...ATTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGTTTGCAGAGCCAAGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | TTTCACTTCCAAATGAAGCATCAGGCTGCCCTTCTTAGGGGGTTGGTTTGCTCCAAGTGTCACCTTCTCTaGGGCTTGAGAGTGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FHFQMKHQAALLRGLVCSKCHLL*GLRVSA Trigger: GGCGCTCACTCTCAAGCCCCAGAGAAGGTGACACTT...GGAGCAAACCAACCCCCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGCATCTCCTAGGCAGCTaGGCTCTGGCTGCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELEHLLGS*ALAAMT Trigger: GGTCATTGCAGCCAGAGCTCAGCTGCCTAGGAGATG...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | TGGACAGTTGATGATGCCAGTTTTGTAATAATCCAGGACTGTGCGGAACACGGTCATCTCCTAGGCAGCTaGGCTCTGGCTGCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: WTVDDASFVIIQDCAEHGHLLGS*ALAAMT Trigger: GGTCATTGCAGCCAGAGCTCAGCTGCCTAGGAGATG...ACCGTGTTCCGCACAGTCCTGGATTATTACAAAACTGGCATCATCAACTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 |
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| CDS-3UTR TCA 90 bp | CACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTCGTCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQEVNAKIQPRAPDPKARLPSFS*VAAKAS Trigger: TGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAG...ACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRQEEASPNGEKPQEGRYPDEQ*KSEDLP Trigger: TGGTAAATCCTCAGATTTTCACTGCTCATCCGGATA...CCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR TCA 90 bp | TCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: STKSTRPKSSFARAGKAGFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...GCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS-3UTR TCA 90 bp | AAGGGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCTTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KGRRQEEASPNGEKPQEGFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...GCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | TGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTTCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLGVPTQRRAPTTGQRPFSFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...AAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | GCTGCAGGTAGGCAACCATGTAGCACCAACAAAATCAAAGCCAGACCTGGCCTCAGAGCACTCAGATCCTaGCATCGGATAGTGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGRQPCSTNKIKARPGLRALRS*HRIVLK Trigger: CTTCAACACTATCCGATGTCAGGATCTGAGTGCTCT...GAGGCCAGGTCTGGCTTTGATTTTGTTGGTGCTACATGGTTGCCTACCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118762.9 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR GCA 90 bp | CAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCATTACCACAAAACGAGTaGCATCCACAAGAAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGGLVRGTHTKKSSNNWALPQNE*HPQEVS Trigger: TGACACTTCTTGTGGATGGCACTCGTTTTGTGGTAA...TGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | TTTCACTTCCAAATGAAGCATCAGGCTGCCCTTCTTAGGGGGTTGGTTTGCTCCCGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHFQMKHQAALLRGLVCSRVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...GGAGCAAACCAACCCCCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AAGGGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KGRRQEEASPNGEKPQEGFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...GCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | TTTCACTTCCAAATGAAGCATCAGGCTGCCCTTCTTAGGGGGTTGGTTTGCTCCTTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: FHFQMKHQAALLRGLVCSLLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...GGAGCAAACCAACCCCCTAAGAAGGGCAGCCTGATGCTTCATTTGGAAGTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACATGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNGEKPQEGREAWLGVPTCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...TGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EASPNGEKPQEGREAWLGFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...CCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTACACACCGCCCAGGGTGGAGGACGGACTCAAAGGTGGACTTCTACCGGTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLTHRPGWRTDSKVDFYRFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...CCGGTAGAAGTCCACCTTTGAGTCCGTCCTCCACCCTGGGCGGTGTGTAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CCA 90 bp | AACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGEKPQEGREAWLGVPTQRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...TTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGGLVRGTHTKKSSNNWRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...CCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSTRPKSSFARAGKAGRRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CCA 90 bp | GCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AWLGVPTQRRAPTTGQRPRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...CGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR TCA 90 bp | AAGGGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGRRQEEASPNGEKPQEGYPDEQ*KSEDLP Trigger: TGGTAAATCCTCAGATTTTCACTGCTCATCCGGATA...GCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGATATCCGGATGAGCAGTaGAAATCTGAGGATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGYPDEQ*KSEDLP Trigger: TGGTAAATCCTCAGATTTTCACTGCTCATCCGGATA...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTTCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKSTRPKSSFARAGKASFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR TCA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTAGAGCACTCAGATCCTaGCATCGGATAGTGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKSTRPKSSFARAGKARALRS*HRIVLK Trigger: CTTCAACACTATCCGATGTCAGGATCTGAGTGCTCT...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGATTACCACAAAACGAGTaGCATCCACAAGAAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGLPQNE*HPQEVS Trigger: TGACACTTCTTGTGGATGGCACTCGTTTTGTGGTAA...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTGTCAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVPTQRRAPTTGQRPFVNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...GACAAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGATGCGGAAGGCTTGCTaGCTGAGAGGCATAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELMRKAC*LRGIVK Trigger: CTTGACTATGCCTCTCAGCCAGCAAGCCTTCCGCAT...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLGGWFAPMLVKSRAERVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...CTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTAGAATCTGTAGAGCTTaGAGCTGTAAAGAATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DRKRHLLTVRNHRRAGRPRICRA*SCKESD Trigger: ATCTGATTCTTTACAGCTCCAAGCTCTACAGATTCT...AGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057174.16 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTACACACCGCCCAGGGTGGAGGACGGACTCAAAGGTGGACTTCTACCGGAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QLTHRPGWRTDSKVDFYRKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...CCGGTAGAAGTCCACCTTTGAGTCCGTCCTCCACCCTGGGCGGTGTGTAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: REAWLGVPTQRRAPTTGQRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CAA 72 bp | CACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTaGTCCCTAATCTTGAAAGTCATTCGGAGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKEELQQLGRGR*SLILKVIRSHL Trigger: CAGATGGCTCCGAATGACTTTCAAGATTAGGGACAAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELELPSFS*VAAKAS Trigger: TGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAG...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | AAATTAGTGAGGGATTTGCTGCGAACGCACTGGAAATCCACATGGCGACTCTTTCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLVRDLLRTHWKSTWRLFLPSFS*VAAKAS Trigger: TGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAG...AAAGAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAAATCCCTCACTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122163.9 ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTGTCTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVPTQRRAPTTGQRPFVYPDEQ*KSEDLP Trigger: TGGTAAATCCTCAGATTTTCACTGCTCATCCGGATA...GACAAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKSTRPKSSFARAGKAFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR TCA 90 bp | CCGCCCGCCAGGTCTCCTCTTGATCTTCTCTTTACAGGTAGGGTAACCTTCAATTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPARSPLDLLFTGRVTFNFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...ATTGAAGGTTACCCTACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGGGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGTCATTCGGAGCCATCTaGGAGAGTGGAGCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPMSAHSLSFSCHHPVSLSFGAI*ESGAFK Trigger: CTTAAATGCTCCACTCTCTCAGATGGCTCCGAATGA...CAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAAGAGCACTCAGATCCTaGCATCGGATAGTGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKRALRS*HRIVLK Trigger: CTTCAACACTATCCGATGTCAGGATCTGAGTGCTCT...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | AGTAAAATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKIIADIAVRLLALQTAMWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGCAGAGGACACCAAGCTaGTGCCTTCTTTCTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELQRTPS*CLLSLE Trigger: CTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTG...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGAGAGGCATAGTCAAGTaGAAGGTCTTCACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFLGGWFAPMLVKSRAERGIVK*KVFTPG Trigger: GCCAGGAGTGAAGACCTTGCACTTGACTATGCCTCT...CTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTCGTCTTCTTTCTCTTGAGTaGCAGCTAAGGCCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQEVNAKIQPRAPDPKARLLSLE*QLRPHL Trigger: GAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAG...ACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGCGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELERLLPL*KHEPLL Trigger: CAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACG...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTGTTTCCAAATCTCTCTaGCACAATGAAGGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQEVNAKIQPRAPDPKAVSKSL*HNEGLV Trigger: CACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAAC...AGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | ATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGGAAATGTTGCTGCGAACGCACTaGAAATCCACATGGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: IIADIAVRLLALQTAMEMLLRTH*KSTWRL Trigger: GAGTCGCCATGTGGATTTCCAGTGCGTTCGCAGCAA...CATTTCCATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCATGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGLVRGTHTKKSSNNWACIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...TGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRQEEASPNGEKPQEGRCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...CCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGLVRGTHTKKSSNNKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...GTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GQGGLVRGTHTKKSSNNWKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...CCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR TCA 90 bp | AGTAAAATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKIIADIAVRLLALQTAMLPSFS*VAAKAS Trigger: TGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAG...CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAATTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAATTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR GCA 90 bp | TGGACAGTTGATGATGCCAGTTTTGTAATAATCCAGGACTGTGCGGAACACGGTAGAGGCATAGTCAAGTaGAAGGTCTTCACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WTVDDASFVIIQDCAEHGRGIVK*KVFTPG Trigger: GCCAGGAGTGAAGACCTTGCACTTGACTATGCCTCT...ACCGTGTTCCGCACAGTCCTGGATTATTACAAAACTGGCATCATCAACTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122163.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGTTTCCAAATCTCTCTaGCACAATGAAGGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELVSKSL*HNEGLV Trigger: CACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAAC...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAATTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGATGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | TCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: STKSTRPKSSFARAGKAGFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...GCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGATTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTGTCAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVPTQRRAPTTGQRPFVRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...GACAAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGTTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR GCA 90 bp | CTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGGAGTTTACCACAAAACGAGTaGCATCCACAAGAAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLHTVFPLVATTQCHWSLPQNE*HPQEVS Trigger: TGACACTTCTTGTGGATGGCACTCGTTTTGTGGTAA...ACTCCAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118762.9 ENSMUST00000233197.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGGTTTCCAAATCTCTCTaGCACAATGAAGGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELEVSKSL*HNEGLV Trigger: CACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAAC...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGTAGGCAACCATGTAGCACCAACAAAATCAAAGCCAGACCTGGCCTCTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGRQPCSTNKIKARPGLCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...GAGGCCAGGTCTGGCTTTGATTTTGTTGGTGCTACATGGTTGCCTACCTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGAAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGRPGKGHSNNSEGKETGKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | TCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: STKSTRPKSSFARAGKAGKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...GCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGTTTCATTGGGCCTTGTaGAGTTGTATTCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELEFHWAL*SCILFP Trigger: CGGGAAGAGAATACAACTTCACAAGGCCCAATGAAA...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | ATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGGAAATGTTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IIADIAVRLLALQTAMEMFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...CATTTCCATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR TCA 90 bp | ACACACATTTTGCCCTTAGGAGAAAACCTAATTCTCCAGAATGATTCATTCCCTTGGCACAGCCCACCATaGTGGGCAGAATCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: THILPLGENLILQNDSFPWHSPP*WAESVP Trigger: AGGAACTGATTCTGCCCATCATGGTGGGCTGTGCCA...AGGGAATGAATCATTCTGGAGAATTAGGTTTTCTCCTAAGGGCAAAATGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118762.9 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTAAGAGCACACTTGTTCTTCAATACTGGAGAGAGGGCTTCCAAAACCTGAGAGGCATAGTCAAGTaGAAGGTCTTCACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFKSTLVLQYWREGFQNLRGIVK*KVFTPG Trigger: GCCAGGAGTGAAGACCTTGCACTTGACTATGCCTCT...CAGGTTTTGGAAGCCCTCTCTCCAGTATTGAAGAACAAGTGTGCTCTTAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233197.2 |
||
| 3UTR CAA 72 bp | TACACAGTACCTCCTGAGATGCTGGTTAAAATAGCTTaGCCTGTTGTACCCAGTCCCCATCTTCCTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: YTVPPEMLVKIA*PVVPSPHLPPI Trigger: AATTGGAGGAAGATGGGGACTGGGTACAACAGGCAAAGCTATTTTAACCAGCATCTCAGGAGGTACTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELEYPDEQ*KSEDLP Trigger: TGGTAAATCCTCAGATTTTCACTGCTCATCCGGATA...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | CTATACATGGTCTTATGGGAGCAGCCTTCAAGAAACAACATATTCTGTAAAGAGCGTGTCTCTGAGGTCTaGGATAGAGATGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYMVLWEQPSRNNIFCKERVSEV*DRDAIW Trigger: CCAGATGGCATCTCTATCCCAGACCTCAGAGACACG...CTCTTTACAGAATATGTTGTTTCTTGAAGGCTGCTCCCATAAGACCATGTATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGTTTTCCCATGACATCTaGATAAAAGGGCGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKIIADIAVRLLALQTAMFSHDI*IKGRCT Trigger: TGTGCAGCGCCCTTTTATCCAGATGTCATGGGAAAA...CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCAGACCTGGCCTCAAACACAAGCCAAGCAACTTCACAGAAGTAACCTCTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSQTWPQTQAKQLHRSNLCIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...GAGGTTACTTCTGTGAAGTTGCTTGGCTTGTGTTTGAGGCCAGGTCTGGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAATTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHQEVNAKIQPRAPDPKFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...TTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTGCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLGGWFAPMLVKSRAELRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CAA 72 bp | CAAACACAAGCCAAGCAACTTCACAGAAGTAACCTCTaGATACAGACAACCTCAGCCCATATTCTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTQAKQLHRSNL*IQTTSAHILDA Trigger: AGCATCCAGAATATGGGCTGAGGTTGTCTGTATCAAGAGGTTACTTCTGTGAAGTTGCTTGGCTTGTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCTATGTCTGCACACAGTCTTTCCTTTAGTTGCCACCACCCAGTGTCACTGAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: KPMSAHSLSFSCHHPVSLKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...CAGTGACACTGGGTGGTGGCAACTAAAGGAAAGACTGTGTGCAGACATAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| 3UTR CAA 72 bp | ACACCCAACCCCAGCACAGACTGTTTCTCTGACGTTTaGGTCCTTTTGCTAATAAGCAATTTGTCTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPNPSTDCFSDV*VLLLISNLSDC Trigger: ACAATCAGACAAATTGCTTATTAGCAAAAGGACCAAAACGTCAGAGAAACAGTCTGTGCTGGGGTTGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR GCA 90 bp | GCCACAAGCACAGAAAACACTGTTTTAAGAGCACACTTGTTCTTCAATACTGGAAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATSTENTVLRAHLFFNTGNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...TCCAGTATTGAAGAACAAGTGTGCTCTTAAAACAGTGTTTTCTGTGCTTGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGAGTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLGGWFAPMLVKSRAELEFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...CTCCAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| 3UTR CAA 72 bp | CCCAGCACAGACTGTTTCTCTGACGTTTTGGTCCTTTaGCTAATAAGCAATTTGTCTGATTGTGAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSTDCFSDVLVL*LISNLSDCETT Trigger: AGTGGTTTCACAATCAGACAAATTGCTTATTAGCAAAAGGACCAAAACGTCAGAGAAACAGTCTGTGCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR GCA 90 bp | ACACACATTTTGCCCTTAGGAGAAAACCTAATTCTCCAGAATGATTCATTCCCTAACCTTCAATTCCAATaGGGATGTTCTTCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: THILPLGENLILQNDSFPNLQFQ*GCSSGL Trigger: GAGGCCTGAAGAACATCCGCATTGGAATTGAAGGTT...AGGGAATGAATCATTCTGGAGAATTAGGTTTTCTCCTAAGGGCAAAATGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118762.9 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | ATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGGAAATGAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: IIADIAVRLLALQTAMEMKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...CATTTCCATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATCTTCTTTCTCTTGAGTaGCAGCTAAGGCCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDHILLSYHVPVANGLFNLLSLE*QLRPHL Trigger: GAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAG...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | AGTAAAATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGAAGTTCATCTACTTGTaGTGGGTGATGCATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SKIIADIAVRLLALQTAMKFIYL*WVMHYY Trigger: ATAATAATGCATCACCCACCACAAGTAGATGAACTT...CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR TCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATTTCCTCTTTTTCCCATaGCATCTGGATAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DDHILLSYHVPVANGLFNFLFFP*HLDKRA Trigger: CGCCCTTTTATCCAGATGTCATGGGAAAAAGAGGAA...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | CTATACATGGTCTTATGGGAGCAGCCTTCAAGAAACAACATATTCTGTAAAGAGTGCATTATTATCTCCTaGTCTTCTAAGACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYMVLWEQPSRNNIFCKECIIIS*SSKTSS Trigger: AGAGGATGTCTTAGAAGACCAGGAGATAATAATGCA...CTCTTTACAGAATATGTTGTTTCTTGAAGGCTGCTCCCATAAGACCATGTATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATAGAATCTGTAGAGCTTaGAGCTGTAAAGAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DDHILLSYHVPVANGLFNRICRA*SCKEFG Trigger: CCCAAATTCTTTACAGCTCCAAGCTCTACAGATTCT...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CCA 90 bp | GATGACCACATATTACTTTCTTACCATGTTCCAGTAGCTAATGGCCTATTTAATTTCATCTACTTGTGGTaGGTGATGCATTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDHILLSYHVPVANGLFNFIYLW*VMHYYL Trigger: GAGATAATAATGCATCACCCACCACAAGTAGATGAA...ATTAAATAGGCCATTAGCTACTGGAACATGGTAAGAAAGTAATATGTGGTCATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCCACCTTCTCTGGGGCTaGAGAGTGAGCGCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQEEASPNGEKPQEGREAHLLWG*RVSATS Trigger: GGAGGTGGCGCTCACTCTCAAGCCCCAGAGAAGGTG...GGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | GCTGAGCTGGAGCTCCAGGGAATTCCCTTCGCCTGCCCCGCACCTCCCCAGGTGCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AELELQGIPFACPAPPQVPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...CACCTGGGGAGGTGCGGGGCAGGCGAAGGGAATTCCCTGGAGCTCCAGCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | CCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACATCTCGCTCGCCTTTCTaGGCACAGCCCACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PNGEKPQEGREAWLGVPTSRSPF*AQPTMM Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGA...TGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGTCTCGCTCGCCTTTCTaGGCACAGCCCACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: EASPNGEKPQEGREAWLGSRSPF*AQPTMM Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGA...CCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACGAGGATGCGGAAGGCTaGCTGGCTGAGAGGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGQGGLVRGTHTKKSSNNEDAEG*LAERHS Trigger: ACTATGCCTCTCAGCCAGCAAGCCTTCCGCATCCTC...GTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGAGGATGCGGAAGGCTaGCTGGCTGAGAGGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRQEEASPNGEKPQEGREEDAEG*LAERHS Trigger: ACTATGCCTCTCAGCCAGCAAGCCTTCCGCATCCTC...CTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | CCGGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGTCTCGCTCGCCTTTCTaGGCACAGCCCACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PEADPEKGTVTTQKGRRQSRSPF*AQPTMM Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGA...CTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGTCTCGCTCGCCTTTCTaGGCACAGCCCACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGSRSPF*AQPTMM Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGA...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS CCA 90 bp | TCAGTTCCTCGAGGTAGTGGTCAAACTGCTTGTGGGCACCATCGTTaGAGAGCTCGTGCAGTAGAGCACCTTCACTCCTGGCAGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVPRGSGQTACGHHR*RARAVEHLHSWQLG Trigger: CCCTAGCTGCCAGGAGTGAAGGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGACCACTACCTCGAGGAACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232772.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTCTCGCTCGCCTTTCTaGGCACAGCCCACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVRGTHTKKSSNNWAEAVSRSPF*AQPTMM Trigger: CATCATGGTGGGCTGTGCCAAGAAAGGCGAGCGAGA...AACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
||
| CDS TCA 90 bp | ACACTATGCAGACCAGAGGACACCAAGCTGCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCATCTCCTAGGCAGCTGAGCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLCRPEDTKLLPSFS*VAAKASSPRQLSSG Trigger: GCCAGAGCTCAGCTGCCTAGGAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233064.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTTGAGGATGCGGAAGGCTaGCTGGCTGAGAGGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: WLGVPTQRRAPTTGQRPFEDAEG*LAERHS Trigger: ACTATGCCTCTCAGCCAGCAAGCCTTCCGCATCCTC...AAACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RQEEASPNGEKPQEGREAPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...GGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS TCA 90 bp | CACAATGAAGGGCTCGTGGCTCCGTTTGCTCCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGGAAGTGGCATTATGTGAGGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HNEGLVAPFAPTLEA*ALVVFRKWHYVRMR Trigger: CCGCATCCTCACATAATGCCACTTCCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACGGAGCCACGAGCCCTTCATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS TCA 90 bp | CACCTCCAAAACCTAAGCCGCTGTTTCCAAATCTCTCTGGCACAATaGAGGGCTCGTGGCTCCGTTTGCTCCCACTCTGGAAGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLQNLSRCFQISLAQ*RARGSVCSHSGSMS Trigger: GCTCATGCTTCCAGAGTGGGAGCAAACGGAGCCACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAACAGCGGCTTAGGTTTTGGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000153462.8 ENSMUST00000153831.9 ENSMUST00000168507.2 ENSMUST00000232729.2 ENSMUST00000233197.2 |
||
| CDS TCA 90 bp | CTTCCCGGCCCAAACATCCTTCACTCCTGGCAGCTAGGGGATAAGTaGCACTATGCAGACCAGAGGACACCAAGCTGCTGCCTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGPNILHSWQLGDK*HYADQRTPSCCLLS Trigger: AGAAAGAAGGCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGCTGCCAGGAGTGAAGGATGTTTGGGCCGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233145.2 ENSMUST00000233847.2 |
||
| CDS TCA 90 bp | GCTCGTGCAGTAGAGCACCTTCACTCCTGGCAGCTAGGGGATAAGTaGCACTATGCAGACCAGAGGACACCAAGCTGCTGCCTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARAVEHLHSWQLGDK*HYADQRTPSCCLLS Trigger: AGAAAGAAGGCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGCTGCCAGGAGTGAAGGTGCTCTACTGCACGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232772.2 |
||
| CDS CCA 90 bp | CCTAAGCCGCTGTTTCCAAATCTCTCTGGCACAATGAAGGGCTCGTaGCTCCGTTTGCTCCCACTCTGGAAGCATGAGCCCTTGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKPLFPNLSGTMKGS*LRLLPLWKHEPLLS Trigger: AGACAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACGGAGCCACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAACAGCGGCTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000153462.8 ENSMUST00000153831.9 ENSMUST00000168507.2 ENSMUST00000232729.2 ENSMUST00000233197.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: REAWLGVPTQRRAPTTGQPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPNGEKPQEGREAWLGVPGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...GGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGGAGGTGAATGCAAAGATTCAACCAAGAGCACCAGACCCAAAAGCTCGTGAGGATGCGGAAGGCTaGCTGGCTGAGAGGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: HQEVNAKIQPRAPDPKAREDAEG*LAERHS Trigger: ACTATGCCTCTCAGCCAGCAAGCCTTCCGCATCCTC...ACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATCTTTGCATTCACCTCCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RKRHLLTVRNHRRAGRPGYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...ACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGQGGLVRGTHTKKSSNNYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...GTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGGCCGTTCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVRGTHTKKSSNNWAEAVPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...AACGGCCTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGACCCGGAAAAGGGCACAGTAACAACTCAGAAGGGAAGGAGACAGGACCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGRPGKGHSNNSEGKETGPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...TCCTGTCTCCTTCCCTTCTGAGTTGTTACTGTGCCCTTTTCCGGGTCTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | AACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NGEKPQEGREAWLGVPTQGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...TTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGCCGCGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TKSTRPKSSFARAGKAGRGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...GCGGCCAGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS GCA 90 bp | CTTGTTGTCTTCAGGAAGTGGCATTATGTGAGGATGCGGAAGGCTTaGTGGCTGAGAGGCATAGTCAAGTGCAAGGTCTTCACTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVFRKWHYVRMRKA*WLRGIVKCKVFTPG Trigger: GCCAGGAGTGAAGACCTTGCACTTGACTATGCCTCTCAGCCAGCAAGCCTTCCGCATCCTCACATAATGCCACTTCCTGAAGACAACAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233064.2 ENSMUST00000233197.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: REAWLGVPTQRRAPTTGQYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...CTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRRQEEASPNGEKPQEGRYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...CCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGAGTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGLVRGTHTKKSSNNWAEYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...CTCTGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGQGGLVRGTHTKKSSNNVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...GTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: DRKRHLLTVRNHRRAGRPVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...AGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
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Preference number: 5 (lower is better) Translates to: GQGGLVRGTHTKKSSNNWVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...CCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | CAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: QGGLVRGTHTKKSSNNWAGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...TGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: EEASPNGEKPQEGREAWLGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...TAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS TCA 90 bp | CATAGTCAAGTGCAAGGTCTTCACTCCTGGCAGCTAGGGGATAAGTaGCACTATGCAGACCAGAGGACACCAAGCTGCTGCCTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: HSQVQGLHSWQLGDK*HYADQRTPSCCLLS Trigger: AGAAAGAAGGCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGCTGCCAGGAGTGAAGACCTTGCACTTGACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233064.2 ENSMUST00000233197.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTTGGCTCTGCAAACAGCCATGGAAATGTGAGAGGAAGGAGCTAGGGAATCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: GSWLCKQPWKCERKELGNPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...ATTCCCTAGCTCCTTCCTCTCACATTTCCATGGCTGTTTGCAGAGCCAAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGACAGGAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
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Preference number: 5 (lower is better) Translates to: EGDRKRHLLTVRNHRRAGVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...CCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTCCTGTCTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGGCATCTCCTAACGGTGAGAAACCACAGGAGGGCAGGGAGGCCTGGTTAGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
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Preference number: 5 (lower is better) Translates to: EEASPNGEKPQEGREAWLVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...TAACCAGGCCTCCCTGCCCTCCTGTGGTTTCTCACCGTTAGGAGATGCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | CAGGGAGGCCTGGTTAGGGGTACCCACACAAAGAAGAGCTCCAACAACTGGGCAGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
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Preference number: 5 (lower is better) Translates to: QGGLVRGTHTKKSSNNWAVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...TGCCCAGTTGTTGGAGCTCTTCTTTGTGTGGGTACCCCTAACCAGGCCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000150858.2 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS GCA 90 bp | TGTGAAGTTGTATTCTCTTCCCGGCCCAAACATCCACAAAACGAGTaGCATCCACAAGAAGTGTCACCTTCTCTGGGGCTTGAGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: CEVVFSSRPKHPQNE*HPQEVSPSLGLESE Trigger: CTCACTCTCAAGCCCCAGAGAAGGTGACACTTCTTGTGGATGGCACTCGTTTTGTGGATGTTTGGGCCGGGAAGAGAATACAACTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232729.2 |
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| CDS-3UTR CAA 90 bp | ATGACTTCAGACCGCCCGCCAGGTCTCCTCTTGATCTTCTCTTTACAGGTAGGGTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: MTSDRPPGLLLIFSLQVGYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...CCCTACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGGGCGGTCTGAAGTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| CDS-3UTR CAA 90 bp | CCGCCCGCCAGGTCTCCTCTTGATCTTCTCTTTACAGGTAGGGTAACCTTCAATTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: PPARSPLDLLFTGRVTFNYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...ATTGAAGGTTACCCTACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGGGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| CDS-3UTR CAA 90 bp | GATTCAACCAAGAGCACCAGACCCAAAAGCTCGTTTGCCAGGGCTGGTAAAGCTGGAGCTGTAAAGAATTaGGGAATACTCTTCCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: DSTKSTRPKSSFARAGKAGAVKN*GILFPH Trigger: ATGGGGGAAGAGTATTCCCAAATTCTTTACAGCTCC...AGCTTTACCAGCCCTGGCAAACGAGCTTTTGGGTCTGGTGCTCTTGGTTGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS TCA 90 bp | TTCCCGGCCCAAACATCCTTCCCAACATGGTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCACAAAACGAGTGCCATCCACAAGAA | + |
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Preference number: 5 (lower is better) Translates to: FPAQTSFPTWYPDEQ*KSEDLPQNECHPQE Trigger: TTCTTGTGGATGGCACTCGTTTTGTGGTAAATCCTCAGATTTTCACTGCTCATCCGGATACCATGTTGGGAAGGATGTTTGGGCCGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000153462.8 ENSMUST00000153831.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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| CDS-3UTR CAA 90 bp | CCCTTCTTAGGGGGTTGGTTTGCTCCTATGTTAGTAAAAAGCAGAGCTGAGCTGGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
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Preference number: 5 (lower is better) Translates to: PFLGGWFAPMLVKSRAELVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...CAGCTCAGCTCTGCTTTTTACTAACATAGGAGCAAACCAACCCCCTAAGAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS-3UTR CAA 90 bp | AGTAAAATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGTACTCCCCCTTTTCATaGGGCCTTGTGAAGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SKIIADIAVRLLALQTAMYSPFS*GLVKLY Trigger: ATACAACTTCACAAGGCCCAATGAAAAGGGGGAGTA...CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CAA 90 bp | CATCAGACTTTCTATGCACATAGCCCAGCTTACTTATTCAGGCACTTACAAAAGCCGCCAGGTCTCCTCTaGATCTTCTCTTTACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: HQTFYAHSPAYLFRHLQKPPGLL*IFSLQV Trigger: TACCTGTAAAGAGAAGATCAAGAGGAGACCTGGCGG...CTTTTGTAAGTGCCTGAATAAGTAAGCTGGGCTATGTGCATAGAAAGTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118762.9 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 |
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| CDS-3UTR CAA 90 bp | AGTAAAATAATTGCAGACATTGCTGTCAGGCTCTTGGCTCTGCAAACAGCCATGGTCAAGTTCATCTACTaGTGGTGGGTGATGCATTAT | + |
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Preference number: 5 (lower is better) Translates to: SKIIADIAVRLLALQTAMVKFIY*WWVMHY Trigger: ATAATGCATCACCCACCACAAGTAGATGAACTTGAC...CATGGCTGTTTGCAGAGCCAAGAGCCTGACAGCAATGTCTGCAATTATTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000232874.2 ENSMUST00000233197.2 ENSMUST00000233334.2 |
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| CDS TCA 72 bp | CTTGAGTGGCAGCTAAGGCCTCATCTCCTAGGCAGCTaGGCTCTGGCTGCAATGACCAGTCGCCATCACTGC | + |
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Preference number: 6 (lower is better) Translates to: LEWQLRPHLLGS*ALAAMTSRHHC Trigger: GCAGTGATGGCGACTGGTCATTGCAGCCAGAGCTCAGCTGCCTAGGAGATGAGGCCTTAGCTGCCACTCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233064.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS GCA 72 bp | TCAAACTGCTTGTGGGCACCATCGTTGGAGAGCTCGTaGAGTAGAGCACCTTCACTCCTGGCAGCTAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SNCLWAPSLESS*SRAPSLLAARG Trigger: TCCCCTAGCTGCCAGGAGTGAAGGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232772.2 |
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| CDS CCA 72 bp | CGAGGTAGTGGTCAAACTGCTTGTGGGCACCATCGTTaGAGAGCTCGTGCAGTAGAGCACCTTCACTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RGSGQTACGHHR*RARAVEHLHSW Trigger: CCAGGAGTGAAGGTGCTCTACTGCACGAGCTCTCCAACGATGGTGCCCACAAGCAGTTTGACCACTACCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232772.2 |
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| CDS TCA 72 bp | AGACCAGAGGACACCAAGCTGCTGCCTTCTTTCTCTTaGGTGGCAGCTAAGGCCTCATCTCCTAGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPEDTKLLPSFS*VAAKASSPRQL Trigger: CAGCTGCCTAGGAGATGAGGCCTTAGCTGCCACTCAAGAGAAAGAAGGCAGCAGCTTGGTGTCCTCTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000232772.2 ENSMUST00000233064.2 ENSMUST00000233145.2 ENSMUST00000233197.2 ENSMUST00000233847.2 |
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| CDS TCA 72 bp | GTGCAAGGTCTTCACTCCTGGCAGCTAGGGGATAAGTaGCACTATGCAGACCAGAGGACACCAAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VQGLHSWQLGDK*HYADQRTPSCC Trigger: GCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGCTGCCAGGAGTGAAGACCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233064.2 ENSMUST00000233197.2 |
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| CDS TCA 72 bp | GGGCTCGTGGCTCCGTTTGCTCCCACTCTGGAAGCATaGGCCCTTGTTGTCTTCAGGAAGTGGCATTATGTG | + |
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Preference number: 6 (lower is better) Translates to: GLVAPFAPTLEA*ALVVFRKWHYV Trigger: CACATAATGCCACTTCCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACGGAGCCACGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057174.16 ENSMUST00000122163.9 ENSMUST00000168507.2 ENSMUST00000233064.2 ENSMUST00000233197.2 |
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| CDS TCA 72 bp | GTAGAGCACCTTCACTCCTGGCAGCTAGGGGATAAGTaGCACTATGCAGACCAGAGGACACCAAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VEHLHSWQLGDK*HYADQRTPSCC Trigger: GCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGCTGCCAGGAGTGAAGGTGCTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232772.2 |
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| CDS CCA 72 bp | ACAATGAAGGGCTCGTGGCTCCGTTTGCTCCCACTCTaGAAGCATGAGCCCTTGTTGTCTTCAGGAAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TMKGSWLRLLPL*KHEPLLSSGSG Trigger: GCCACTTCCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACGGAGCCACGAGCCCTTCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000153462.8 ENSMUST00000153831.9 ENSMUST00000168507.2 ENSMUST00000232729.2 ENSMUST00000233197.2 |
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| CDS TCA 72 bp | CCAAACATCCTTCACTCCTGGCAGCTAGGGGATAAGTaGCACTATGCAGACCAGAGGACACCAAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PNILHSWQLGDK*HYADQRTPSCC Trigger: GCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGCTGCCAGGAGTGAAGGATGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233145.2 ENSMUST00000233847.2 |
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| CDS CAA 90 bp | CTGTTTCCAAATCTCTCTGGCACAATGAAGGGCTCGTGGCTCCGTTaGCTCCCACTCTGGAAGCATGAGCCCTTGTTGTCTTCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LFPNLSGTMKGSWLR*LPLWKHEPLLSSGS Trigger: ACTTCCTGAAGACAACAAGGGCTCATGCTTCCAGAGTGGGAGCAAACGGAGCCACGAGCCCTTCATTGTGCCAGAGAGATTTGGAAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000122163.9 ENSMUST00000153462.8 ENSMUST00000153831.9 ENSMUST00000168507.2 ENSMUST00000232729.2 ENSMUST00000233197.2 |
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| CDS GCA 72 bp | GTATTCTCTTCCCGGCCCAAACATCCACAAAACGAGTaGCATCCACAAGAAGTGTCACCTTCTCTGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VFSSRPKHPQNE*HPQEVSPSLGL Trigger: AAGCCCCAGAGAAGGTGACACTTCTTGTGGATGGCACTCGTTTTGTGGATGTTTGGGCCGGGAAGAGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232729.2 |
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| CDS TCA 72 bp | CAAACATCCTTCCCAACATGGTATCCGGATGAGCAGTaGAAATCTGAGGATTTACCACAAAACGAGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QTSFPTWYPDEQ*KSEDLPQNECH Trigger: ATGGCACTCGTTTTGTGGTAAATCCTCAGATTTTCACTGCTCATCCGGATACCATGTTGGGAAGGATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057174.16 ENSMUST00000117672.9 ENSMUST00000118762.9 ENSMUST00000153462.8 ENSMUST00000153831.9 ENSMUST00000168507.2 ENSMUST00000233197.2 |
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