Pregenerated sensors for KCTD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016940Ensembl transcript IDs: ENSMUST00000103035.10, ENSMUST00000106533.8, ENSMUST00000123345.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGCCAGAGGCGCACTGTCTTCATCCAGGCGGTGGGGCTCCTCTaGCTTGGCCGGCCGGACACCACTTCTCGGGACCAGGCGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: CSQRRTVFIQAVGLL*LGRPDTTSRDQAQL Trigger: AAGCTGCGCCTGGTCCCGAGAAGTGGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGACAGTGCGCCTCTGGCTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | CTGGGTGAGGATGGGCTACGAGGGGCCTGGCTGAGAGACACCAGGTaGTCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACC | + |
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Preference number: 1 (lower is better) Translates to: LGEDGLRGAWLRDTR*STRGTRNSNSHAPT Trigger: GGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTGGTGTCTCTCAGCCAGGCCCCTCGTAGCCCATCCTCACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | GCAGCCTCAAACCTCTGGGTGAGGATGGGCTACGAGGGGCCTGGCTaGGAGACACCAGGTGATCCACTCGTGGGACCAGGAACAGCAACT | + |
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Preference number: 1 (lower is better) Translates to: AASNLWVRMGYEGPG*ETPGDPLVGPGTAT Trigger: AGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTGGTGTCTCTCAGCCAGGCCCCTCGTAGCCCATCCTCACCCAGAGGTTTGAGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR CCA 90 bp | CCCTGCCCAGGGAAGAATGGTCCAAGCAGCTGCTCATGTCCATCATaGCGCACGCAGGCTGAGACCAGGCACAGCTCAGGACAAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: PCPGKNGPSSCSCPS*RTQAETRHSSGQAF Trigger: GAAGGCTTGTCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTCTTCCCTGGGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | GAATGGTCCAAGCAGCTGCTCATGTCCATCATGGCGCACGCAGGCTaGGACCAGGCACAGCTCAGGACAAGCCTTCTTCCTCGGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: EWSKQLLMSIMAHAG*DQAQLRTSLLPRLR Trigger: CCTGAGCCGAGGAAGAAGGCTTGTCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR GCA 90 bp | GACCAGGCGCAGCTTTGCTTTGCAGTAGCTCGGTTACTGTACAGGTaGAGGATCTCCGTCGCAGCTGCTGGGCCGATTGCTCTCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: DQAQLCFAVARLLYR*RISVAAAGPIALLP Trigger: AGGCAAGAGAGCAATCGGCCCAGCAGCTGCGACGGAGATCCTGCACCTGTACAGTAACCGAGCTACTGCAAAGCAAAGCTGCGCCTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR GCA 90 bp | CCATCAGCTTTTCGAGTGTGGCATAAGTGTGCACATGTGTGGGTGTaGATGCAGGGTGGCGGCCAGAGTGGAAACGGCTCCTCTTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PSAFRVWHKCAHVWV*MQGGGQSGNGSSCS Trigger: AGAGCAAGAGGAGCCGTTTCCACTCTGGCCGCCACCCTGCATGCACACCCACACATGTGCACACTTATGCCACACTCGAAAAGCTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | GCCTATCTAGCAAGGCAGGCTCAGAGCCTCTGCTCACTGGGTACCTaGGTGCAATGGGTTCTCTTGCCAGGTACAGATGACCAGAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: AYLARQAQSLCSLGT*VQWVLLPGTDDQKV Trigger: AACCTTCTGGTCATCTGTACCTGGCAAGAGAACCCATTGCACTCAGGTACCCAGTGAGCAGAGGCTCTGAGCCTGCCTTGCTAGATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | TCCCACGCTCCAACCACACTACAGGACACCTTATCCTCCTGCCTCTaGGGCTCTGTTCATAGGATTGTGGGTCCTTCAGCAACTTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SHAPTTLQDTLSSCL*GSVHRIVGPSATLF Trigger: GAACAAAGTTGCTGAAGGACCCACAATCCTATGAACAGAGCCTCAGAGGCAGGAGGATAAGGTGTCCTGTAGTGTGGTTGGAGCGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | CAGACACTACTTGAGTCTAGACACAAACAAGAGCCTTCACCATCCTaGCAGGATACAAACCTGCCCTGGTCCAGGCTCAGCTCCCATCAG | + |
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Preference number: 1 (lower is better) Translates to: QTLLESRHKQEPSPS*QDTNLPWSRLSSHQ Trigger: CTGATGGGAGCTGAGCCTGGACCAGGGCAGGTTTGTATCCTGTCAGGATGGTGAAGGCTCTTGTTTGTGTCTAGACTCAAGTAGTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR GCA 90 bp | CTCAGAGCCTCTGCTCACTGGGTACCTGAGTGCAATGGGTTCTCTTaGCAGGTACAGATGACCAGAAGGTTCTGTGCTGTTAGACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LRASAHWVPECNGFS*QVQMTRRFCAVRPK Trigger: CTTTGGTCTAACAGCACAGAACCTTCTGGTCATCTGTACCTGGCAAGAGAACCCATTGCACTCAGGTACCCAGTGAGCAGAGGCTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR GCA 90 bp | CTCACAGTCAGCACACAGGTTCTTCACAAGTGTGTAGTGTGTGTCTaGAGGGCACTGTGTGGAAGAGAAGGGAGGAATGGATTGTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: LTVSTQVLHKCVVCV*RALCGREGRNGLSR Trigger: CCTTGACAATCCATTCCTCCCTTCTCTTCCACACAGTGCCCTGCAGACACACACTACACACTTGTGAAGAACCTGTGTGCTGACTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR GCA 90 bp | GCTGTACACAACCTGGGCAAGGCTGGGTCTCCAGCACCAGATGGCTaGAGGGATTTAAGTCACAGGAAAGCTGATGACAGTGAACAATTT | + |
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Preference number: 1 (lower is better) Translates to: AVHNLGKAGSPAPDG*RDLSHRKADDSEQF Trigger: AAATTGTTCACTGTCATCAGCTTTCCTGTGACTTAAATCCCTGCAGCCATCTGGTGCTGGAGACCCAGCCTTGCCCAGGTTGTGTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR CCA 90 bp | ATAGGATTGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTaGGTCCACCACACTAACACGGAATGCCCTGCCCAGGGAAGAATG | + |
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Preference number: 1 (lower is better) Translates to: IGLWVLQQLCSVPRT*VHHTNTECPAQGRM Trigger: CATTCTTCCCTGGGCAGGGCATTCCGTGTTAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACAATCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR TCA 90 bp | CAAGAGACAACCACAAACACACCACCACTTTTAGCTATGACAATATaGCACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: QETTTNTPPLLAMTI*HIWQRPQNSLPHPK Trigger: CTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGTGGTGGTGTGTTTGTGGTTGTCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | AGAATGGTCCAAGCAGCTGCTCATGTCCATCATGGCGCACGCAGGCTGAGACCAGCGGTGGGGCTCCTCTaGCTTGGCCGGCCGGACACC | + |
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Preference number: 2 (lower is better) Translates to: RMVQAAAHVHHGARRLRPAVGLL*LGRPDT Trigger: GGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGC...TGGTCTCAGCCTGCGTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCGCACTGTCTTCATCCAGGCGGTGGGGCTCCTCTGGCTTGGCCGGCCGGCACACTAACACGGAATaGCCTGCCCAGGGAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: RGALSSSRRWGSSGLAGRHTNTE*PAQGRM Trigger: CATTCTTCCCTGGGCAGGGCATTCCGTGTTAGTGTG...CCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGACAGTGCGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTGGTGTGCATGCAGGGTaGCGGCCAGAGTGGAAACGG | + |
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Preference number: 2 (lower is better) Translates to: QVIHSWDQEQQLPRSNHTGVHAG*RPEWKR Trigger: CCGTTTCCACTCTGGCCGCCACCCTGCATGCACACC...AGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCATCCAGGCGGTGGGGCTCCTCTGGCTTGGCCGGCCGGACACCACTTCTCGGCCGATTGCTCTCTTaGCTTCAGGGTTCTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: SSSRRWGSSGLAGRTPLLGRLLS*LQGSET Trigger: AGTTTCAGAACCCTGAAGGCAAGAGAGCAATCGGCC...GAGAAGTGGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTCATCCAGGCGGTGGGGCTCCTCTGGCTTGGCCGGCCGGACACCACTTCTGTGTAGTGTGTGTCTaGAGGGCACTGTGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: CLHPGGGAPLAWPAGHHFCVVCV*RALCGR Trigger: TCTTCCACACAGTGCCCTGCAGACACACACTACACA...GAAGTGGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTACAGAGGCCCACAAAGTCCTTTCTCTTTGGTCCAGTTCAAGAAGCTGGGGCGGTGGGGCTCCTCTaGCTTGGCCGGCCGGACACC | + |
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Preference number: 2 (lower is better) Translates to: PLQRPTKSFLFGPVQEAGAVGLL*LGRPDT Trigger: GGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGC...CCCAGCTTCTTGAACTGGACCAAAGAGAAAGGACTTTGTGGGCCTCTGTAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATCCAGGCGGTGGGGCTCCTCTGGCTTGGCCGGCCGGACACCACTTCTCTCAGCTTTTCGAGTGTaGCATAAGTGTGCACATGTG | + |
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Preference number: 2 (lower is better) Translates to: SSSRRWGSSGLAGRTPLLSAFRV*HKCAHV Trigger: CACATGTGCACACTTATGCCACACTCGAAAAGCTGA...GAGAAGTGGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | GATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACAGGGATACAAACCTGCCCTaGTCCAGGCTCAGCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: DPLVGPGTATPTLQPHYRDTNLP*SRLSSH Trigger: ATGGGAGCTGAGCCTGGACCAGGGCAGGTTTGTATC...CCTGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCCACAAGCTCCAGCCAGGGACCCATCCCAGATGCTGTTGTGAAGGTCTGGACCAGGCGCAGCTTTaGTTTGCAGTAGCTCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: TPHKLQPGTHPRCCCEGLDQAQL*FAVARL Trigger: TAACCGAGCTACTGCAAAGCAAAGCTGCGCCTGGTC...CAGACCTTCACAACAGCATCTGGGATGGGTCCCTGGCTGGAGCTTGTGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACAGGCCAGCACCAGATGGCTaGAGGGATTTAAGTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: DPLVGPGTATPTLQPHYRPAPDG*RDLSHR Trigger: CCTGTGACTTAAATCCCTGCAGCCATCTGGTGCTGG...CCTGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACAGGGACCCATCCCAGATaGTGTTGTGAAGGTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VIHSWDQEQQLPRSNHTTGTHPR*CCEGLF Trigger: GAACAGACCTTCACAACAGCATCTGGGATGGGTCCC...TGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACAAGAGAAGGGAGGAATaGATTGTCAAGGAGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PGDPLVGPGTATPTLQPHKRREE*IVKEQG Trigger: GCCTTGCTCCTTGACAATCCATTCCTCCCTTCTCTT...GTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTGCAGAAGCAGTTACAGCAACTGCTCAGTCCCGATGTCCATCTAGCACGGAGCTGTACACAACCTaGGCAAGGCTGGGTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KAAEAVTATAQSRCPSSTELYTT*ARLGLQ Trigger: CTGGAGACCCAGCCTTGCCCAGGTTGTGTACAGCTC...CGTGCTAGATGGACATCGGGACTGAGCAGTTGCTGTAACTGCTTCTGCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCACCCCAAGCCATTACAGAGGCCCACAAAGTCCTTTCTCTTTGGTCCAGTGGTGCAGCTCAGGGGTaGAGCTGTACACAACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SSPQAITEAHKVLSLWSSGAAQG*SCTQPG Trigger: CCCAGGTTGTGTACAGCTCCACCCCTGAGCTGCACC...ACTGGACCAAAGAGAAAGGACTTTGTGGGCCTCTGTAATGGCTTGGGGTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACAACAAAAGCAGGTTTCTaGAAAGGGACCGTGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VIHSWDQEQQLPRSNHTTTKAGF*KGTVQP Trigger: TGGCTGCACGGTCCCTTTTCAGAAACCTGCTTTTGT...TGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | AGAATGGTCCAAGCAGCTGCTCATGTCCATCATGGCGCACGCAGGCTGAGACCAGGCCGATTGCTCTCTTaGCTTCAGGGTTCTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: RMVQAAAHVHHGARRLRPGRLLS*LQGSET Trigger: AGTTTCAGAACCCTGAAGGCAAGAGAGCAATCGGCC...TGGTCTCAGCCTGCGTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | GACGGGGTCAACCAGGTAGGAAAAGGCTGCAGAAGCAGTTACAGCAACTGCTCAGACAGGATACAAACCTaGCCTGGTCCAGGCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: DGVNQVGKGCRSSYSNCSDRIQT*PGPGSA Trigger: AGCTGAGCCTGGACCAGGGCAGGTTTGTATCCTGTC...TGAGCAGTTGCTGTAACTGCTTCTGCAGCCTTTTCCTACCTGGTTGACCCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | GACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCTCCAGTTCAAGAAGCTaGGGGAGGAAGACGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: DNMTHLAASTEQPSSPQASSSRS*GRKTGS Trigger: TGACCCCGTCTTCCTCCCCCAGCTTCTTGAACTGGA...GGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACATTATCCTCCTGCCTCTaGGGCTCTGTTCATAGGATT | + |
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Preference number: 2 (lower is better) Translates to: VIHSWDQEQQLPRSNHTTLSSCL*GSVHRI Trigger: AATCCTATGAACAGAGCCTCAGAGGCAGGAGGATAA...TGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | GACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCGGGACCCATCCCAGATaGTGTTGTGAAGGTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: DNMTHLAASTEQPSSPQAGTHPR*CCEGLF Trigger: GAACAGACCTTCACAACAGCATCTGGGATGGGTCCC...GGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCACCCCAAGCCATTACAGAGGCCCACAAAGTCCTTTCTCTTTGGTCCAGTCTGCCCAGGGAAGAATaGTCCAAGCAGCTGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SSPQAITEAHKVLSLWSSLPREE*SKQLLM Trigger: CATGAGCAGCTGCTTGGACCATTCTTCCCTGGGCAG...ACTGGACCAAAGAGAAAGGACTTTGTGGGCCTCTGTAATGGCTTGGGGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCACGCTCCAACCACACTACAGGACACCTTATCCTCCTGCCTCTGAGGCTCCTGAAGAATCTAAGTaGATGGGGGAAGACAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TPTLQPHYRTPYPPASEAPEESK*MGEDRV Trigger: GACTCTGTCTTCCCCCATCCACTTAGATTCTTCAGG...AGCCTCAGAGGCAGGAGGATAAGGTGTCCTGTAGTGTGGTTGGAGCGTGGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR TCA 90 bp | GACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCACAAAAGCAGGTTTCTaGAAAGGGACCGTGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DNMTHLAASTEQPSSPQATKAGF*KGTVQP Trigger: TGGCTGCACGGTCCCTTTTCAGAAACCTGCTTTTGT...GGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR TCA 90 bp | GACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCTTGCCTTCAGGGTTCTaGAACTTCAGACTGTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: DNMTHLAASTEQPSSPQALPSGF*NFRLSA Trigger: AGCGGACAGTCTGAAGTTTCAGAACCCTGAAGGCAA...GGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | GACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCGGCGCAGCTTTGCTTTaGAGTAGCTCGGTTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: DNMTHLAASTEQPSSPQAGAALL*SSSVTV Trigger: TACAGTAACCGAGCTACTGCAAAGCAAAGCTGCGCC...GGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATAGGATTGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCATGTGTGGGTGTGCATaGAGGGTGGCGGCCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: FIGLWVLQQLCSVPRTWVMCGCA*RVAARV Trigger: CACTCTGGCCGCCACCCTGCATGCACACCCACACAT...GACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACAATCCTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCCACCACACTACTGCCCAGGGAAGAATaGTCCAAGCAGCTGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: CGSFSNFVLYPELGSTTLLPREE*SKQLLM Trigger: CATGAGCAGCTGCTTGGACCATTCTTCCCTGGGCAG...TAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAACCAGGTAGGAAAAGGCTGCAGAAGCAGTTACAGCAACTGCTCAGTCCCGTCTGTACCCAGAACTTaGGTCCACCACACTAACACG | + |
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Preference number: 2 (lower is better) Translates to: VNQVGKGCRSSYSNCSVPSVPRT*VHHTNT Trigger: CGTGTTAGTGTGGTGGACCCAAGTTCTGGGTACAGA...CGGGACTGAGCAGTTGCTGTAACTGCTTCTGCAGCCTTTTCCTACCTGGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTGAAAAGGGACCGTGCAGCCAGAGGCGCACTGTCTTCATCCAGGCGGTGAAAGTCCTTTCTCTTTaGTCCAGTTCAAGAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VSEKGPCSQRRTVFIQAVKVLSL*SSSRSW Trigger: CCAGCTTCTTGAACTGGACCAAAGAGAAAGGACTTT...CACCGCCTGGATGAAGACAGTGCGCCTCTGGCTGCACGGTCCCTTTTCAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR-3UTR TCA 90 bp | GACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCTTATCCTCCTGCCTCTaGGGCTCTGTTCATAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: DNMTHLAASTEQPSSPQALSSCL*GSVHRI Trigger: AATCCTATGAACAGAGCCTCAGAGGCAGGAGGATAA...GGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTTAGCTATGACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCTACGAGGGGCCTGGCTaGGAGACACCAGGTGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: TFSYDNMTHLAASTEQPSYEGPG*ETPGDP Trigger: TGGATCACCTGGTGTCTCTCAGCCAGGCCCCTCGTA...GGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCTGAGGCTCTGTTCATAGGATTGTGGGTCCTTCAGCAACTTTGTTCTGTAGACCAGGCGCAGCTTTaGTTTGCAGTAGCTCGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: ASEALFIGLWVLQQLCSVDQAQL*FAVARL Trigger: TAACCGAGCTACTGCAAAGCAAAGCTGCGCCTGGTC...TACAGAACAAAGTTGCTGAAGGACCCACAATCCTATGAACAGAGCCTCAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTCAGACTGTCCGCTTACATTCGAGAGCCTCTCTCCTGAAGAATCTAAGTCACACTAACACGGAATaGCCTGCCCAGGGAAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: KLQTVRLHSRASLLKNLSHTNTE*PAQGRM Trigger: CATTCTTCCCTGGGCAGGGCATTCCGTGTTAGTGTG...ACTTAGATTCTTCAGGAGAGAGGCTCTCGAATGTAAGCGGACAGTCTGAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCCACCACACTAACACGGAATGCAATGGGTTCTCTTaGCAGGTACAGATGACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LQQLCSVPRTWVHHTNTECNGFS*QVQMTR Trigger: TCTGGTCATCTGTACCTGGCAAGAGAACCCATTGCA...TTCCGTGTTAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR CAA 90 bp | AACCACAAACACACCACCACTTTTAGCTATGACAATATGACACATTaGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAAGCCATTACA | + |
|
Preference number: 2 (lower is better) Translates to: NHKHTTTFSYDNMTH*AASTEQPSSPQAIT Trigger: TGTAATGGCTTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGTGGTGGTGTGTTTGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR CAA 90 bp | AAGAGAAGGGAGGAATGGATTGTCAAGGAGCAAGGCAGACACTACTaGAGTCTAGACACAAACAAGAGCCTTCACCATCCTGACAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: KRREEWIVKEQGRHY*SLDTNKSLHHPDRI Trigger: TATCCTGTCAGGATGGTGAAGGCTCTTGTTTGTGTCTAGACTCAAGTAGTGTCTGCCTTGCTCCTTGACAATCCATTCCTCCCTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTTAGCTATGACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCGAAGACAGAGTCACCTaGGTAACTGTTGGGAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TFSYDNMTHLAASTEQPSEDRVT*VTVGSQ Trigger: TTGGCTCCCAACAGTTACTCAGGTGACTCTGTCTTC...GGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | AGGCGCACTGTCTTCATCCAGGCGGTGGGGCTCCTCTaGCTTGGCCGGCCGGACACCACTTCTCGGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRTVFIQAVGLL*LGRPDTTSRDQ Trigger: CTGGTCCCGAGAAGTGGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGACAGTGCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGCACTGTCTTCATCCAGGCGGTGGGGCTCCTCTGGCTTGGCCGGCCGGACACAGCTGCTGGGCCGATaGCTCTCTTGCCTTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GALSSSRRWGSSGLAGRTQLLGR*LSCLQG Trigger: ACCCTGAAGGCAAGAGAGCAATCGGCCCAGCAGCTG...TGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGACAGTGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | GCACGGCTTAGGATGCCGCAGCCTCAAACCTCTGGGTaGGGATGGGCTACGAGGGGCCTGGCTGAGAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: ARLRMPQPQTSG*GWATRGLAERH Trigger: GTGTCTCTCAGCCAGGCCCCTCGTAGCCCATCCTCACCCAGAGGTTTGAGGCTGCGGCATCCTAAGCCGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | AGGGGCCTGGCTGAGAGACACCAGGTGATCCACTCGTaGGACCAGGAACAGCAACTCCCACGCTCCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGLAERHQVIHS*DQEQQLPRSNH Trigger: GTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTGGTGTCTCTCAGCCAGGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR GCA 72 bp | CGGCCGGACACCACTTCTCGGGACCAGGCGCAGCTTTaGTTTGCAGTAGCTCGGTTACTGTACAGGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPDTTSRDQAQL*FAVARLLYRCR Trigger: CCTGCACCTGTACAGTAACCGAGCTACTGCAAAGCAAAGCTGCGCCTGGTCCCGAGAAGTGGTGTCCGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | GGGAAGAATGGTCCAAGCAGCTGCTCATGTCCATCATaGCGCACGCAGGCTGAGACCAGGCACAGCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GKNGPSSCSCPS*RTQAETRHSSG Trigger: TCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTGAAGGGAGGAATGGATaGTCAAGGAGCAAGGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QVIHSWDQEQQLPRSNHTEGRNG*SRSKAD Trigger: GTCTGCCTTGCTCCTTGACAATCCATTCCTCCCTTC...AGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | GCAAGGCAGGCTCAGAGCCTCTGCTCACTGGGTACCTaGGTGCAATGGGTTCTCTTGCCAGGTACAGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: ARQAQSLCSLGT*VQWVLLPGTDD Trigger: GTCATCTGTACCTGGCAAGAGAACCCATTGCACTCAGGTACCCAGTGAGCAGAGGCTCTGAGCCTGCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR GCA 72 bp | CAGCTTTGCTTTGCAGTAGCTCGGTTACTGTACAGGTaGAGGATCTCCGTCGCAGCTGCTGGGCCGATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLCFAVARLLYR*RISVAAAGPIA Trigger: AGCAATCGGCCCAGCAGCTGCGACGGAGATCCTGCACCTGTACAGTAACCGAGCTACTGCAAAGCAAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR GCA 72 bp | GTACCCAGAACTTGGGTCCACCACACTAACACGGAATaGCCTGCCCAGGGAAGAATGGTCCAAGCAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPRTWVHHTNTE*PAQGRMVQAAA Trigger: AGCAGCTGCTTGGACCATTCTTCCCTGGGCAGGGCATTCCGTGTTAGTGTGGTGGACCCAAGTTCTGGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR GCA 72 bp | GGATCTCCGTCGCAGCTGCTGGGCCGATTGCTCTCTTaGCTTCAGGGTTCTGAAACTTCAGACTGTCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSPSQLLGRLLS*LQGSETSDCPL Trigger: AAGCGGACAGTCTGAAGTTTCAGAACCCTGAAGGCAAGAGAGCAATCGGCCCAGCAGCTGCGACGGAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | ACCACACTAACACGGAATGCCCTGCCCAGGGAAGAATaGTCCAAGCAGCTGCTCATGTCCATCATGGCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TTLTRNALPREE*SKQLLMSIMAH Trigger: GTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTCTTCCCTGGGCAGGGCATTCCGTGTTAGTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | GAAGAATCTAAGTGGATGGGGGAAGACAGAGTCACCTaGGTAACTGTTGGGAGCCAAGGCCCATGGGGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: EESKWMGEDRVT*VTVGSQGPWGR Trigger: CCGACCCCATGGGCCTTGGCTCCCAACAGTTACTCAGGTGACTCTGTCTTCCCCCATCCACTTAGATTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | GCTGCTGGGCCGATTGCTCTCTTGCCTTCAGGGTTCTaGAACTTCAGACTGTCCGCTTACATTCGAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAGPIALLPSGF*NFRLSAYIREP Trigger: AGGCTCTCGAATGTAAGCGGACAGTCTGAAGTTTCAGAACCCTGAAGGCAAGAGAGCAATCGGCCCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR GCA 72 bp | AACAAGAGCCTTCACCATCCTGACAGGATACAAACCTaGCCTGGTCCAGGCTCAGCTCCCATCAGCTTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: NKSLHHPDRIQT*PGPGSAPISFS Trigger: CGAAAAGCTGATGGGAGCTGAGCCTGGACCAGGGCAGGTTTGTATCCTGTCAGGATGGTGAAGGCTCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | TGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTaGGTCCACCACACTAACACGGAATGCCCTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WVLQQLCSVPRT*VHHTNTECPAQ Trigger: CTGGGCAGGGCATTCCGTGTTAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | CAAGCCATTACAGAGGCCCACAAAGTCCTTTCTCTTTaGTCCAGTTCAAGAAGCTGGGGGAGGAAGACGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QAITEAHKVLSL*SSSRSWGRKTG Trigger: CCCCGTCTTCCTCCCCCAGCTTCTTGAACTGGACCAAAGAGAAAGGACTTTGTGGGCCTCTGTAATGGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCCACGCTCCAACCACACTACAGGACACCTTATCCTCCTGCCTCTGAGGCTGGTCCTTCAGCAACTTaGTTCTGTACCCAGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPTLQPHYRTPYPPASEAGPSAT*FCTQNL Trigger: CAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACC...AGCCTCAGAGGCAGGAGGATAAGGTGTCCTGTAGTGTGGTTGGAGCGTGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | CCAACCACACTACAGGACACCTTATCCTCCTGCCTCTaGGGCTCTGTTCATAGGATTGTGGGTCCTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PTTLQDTLSSCL*GSVHRIVGPSA Trigger: TGCTGAAGGACCCACAATCCTATGAACAGAGCCTCAGAGGCAGGAGGATAAGGTGTCCTGTAGTGTGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | CTTGAGTCTAGACACAAACAAGAGCCTTCACCATCCTaGCAGGATACAAACCTGCCCTGGTCCAGGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LESRHKQEPSPS*QDTNLPWSRLS Trigger: GCTGAGCCTGGACCAGGGCAGGTTTGTATCCTGTCAGGATGGTGAAGGCTCTTGTTTGTGTCTAGACTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGAGTCTAGACACAAACAAGAGCCTTCACCATCCTGACAGGATACAAACCCAGCTGCTGGGCCGATaGCTCTCTTGCCTTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YLSLDTNKSLHHPDRIQTQLLGR*LSCLQG Trigger: ACCCTGAAGGCAAGAGAGCAATCGGCCCAGCAGCTG...GGTTTGTATCCTGTCAGGATGGTGAAGGCTCTTGTTTGTGTCTAGACTCAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | TATCCTCCTGCCTCTGAGGCTCTGTTCATAGGATTGTaGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: YPPASEALFIGL*VLQQLCSVPRT Trigger: AGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACAATCCTATGAACAGAGCCTCAGAGGCAGGAGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR CCA 72 bp | TTTAAAACCTCCGGTAGTTGCTTCCTCTGGGCCCTGTaGACAGCATACAATCTGTTGTCAGCCTATCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FKTSGSCFLWAL*TAYNLLSAYLA Trigger: TGCTAGATAGGCTGACAACAGATTGTATGCTGTCCACAGGGCCCAGAGGAAGCAACTACCGGAGGTTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | ACCACAAACACACCACCACTTTTAGCTATGACAATATaGCACATTTGGCAGCGTCCACAGAACAGCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TTNTPPLLAMTI*HIWQRPQNSLP Trigger: AGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGTGGTGGTGTGTTTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| 3UTR TCA 72 bp | TACCTGAGTGCAATGGGTTCTCTTGCCAGGTACAGATaGCCAGAAGGTTCTGTGCTGTTAGACCAAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YLSAMGSLARYR*PEGSVLLDQSF Trigger: AAAACTTTGGTCTAACAGCACAGAACCTTCTGGTCATCTGTACCTGGCAAGAGAACCCATTGCACTCAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCATCATGGCGCACGCAGGCTGAGACCAGGCACAGCTCAGGACAAGCCTTCAGGTACCGCCCACGTTaGGCCGGACCCAGCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSWRTQAETRHSSGQAFRYRPR*AGPSGR Trigger: CCGCCCGCTGGGTCCGGCTCAACGTGGGCGGTACCT...GAAGGCTTGTCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR TCA 90 bp | GTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACAAGGTACCGCCCACGTTaGGCCGGACCCAGCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VIHSWDQEQQLPRSNHTTRYRPR*AGPSGR Trigger: CCGCCCGCTGGGTCCGGCTCAACGTGGGCGGTACCT...TGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGGCGCAGCTTTGCTTTGCAGTAGCTCGGTTACTGTACAGGTGCAGGATCCGCCCATCGCACTGCTaGCACCCCCTCCCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DQAQLCFAVARLLYRCRIRPSHC*HPLPAP Trigger: CGGGGCTGGGAGGGGGTGGCAGCAGTGCGATGGGCG...GATCCTGCACCTGTACAGTAACCGAGCTACTGCAAAGCAAAGCTGCGCCTGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTCTTTGGTCCAGTTCAAGAAGCTGGGGGAGGAAGACGGGGTCAACCAGCGCCCATCGCACTGCTaGCACCCCCTCCCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFSLVQFKKLGEEDGVNQRPSHC*HPLPAP Trigger: CGGGGCTGGGAGGGGGTGGCAGCAGTGCGATGGGCG...CTGGTTGACCCCGTCTTCCTCCCCCAGCTTCTTGAACTGGACCAAAGAGAAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCATCATGGCGCACGCAGGCTGAGACCAGGCACAGCTCAGGACAAGCCTTCGCAACCTGGCAAAGCTaGAGAGAGCTGGGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSWRTQAETRHSSGQAFATWQS*RELGTG Trigger: CCCTGTGCCCAGCTCTCTCCAGCTTTGCCAGGTTGC...GAAGGCTTGTCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCATCCAGGCGGTGGGGCTCCTCTGGCTTGGCCGGCCGGACACCACTTCTCCTTCACGGGGCCTTGTaGAGTTCTGTTCTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSRRWGSSGLAGRTPLLLHGAL*SSVLIV Trigger: GACAATGAGAACAGAACTTCACAAGGCCCCGTGAAG...GAGAAGTGGTGTCCGGCCGGCCAAGCCAGAGGAGCCCCACCGCCTGGATGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR CCA 90 bp | TCTCGGGACCAGGCGCAGCTTTGCTTTGCAGTAGCTCGGTTACTGTACAGGTGCTGGGGCTCACCAGTCTaGCTATGCTTGCCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRDQAQLCFAVARLLYRCWGSPV*LCLPPP Trigger: GGGAGGTGGCAAGCATAGCCAGACTGGTGAGCCCCA...GCACCTGTACAGTAACCGAGCTACTGCAAAGCAAAGCTGCGCCTGGTCCCGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCATCATGGCGCACGCAGGCTGAGACCAGGCACAGCTCAGGACAAGCCTTCCGAGAGCCTCTCTCCTaGAGAATCTTGGCCTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CPSWRTQAETRHSSGQAFREPLS*RILAFS Trigger: CGAAAAGGCCAAGATTCTTCAGGAGAGAGGCTCTCG...GAAGGCTTGTCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103035.10 |
||
| CDS-3UTR GCA 90 bp | CACAACCTGGGCAAGGCTGGGTCTCCAGCACCAGATGGCTGCAGGGATTTAAGTTCACCAGTCTGGCTATaGTTGCCACCTCCCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HNLGKAGSPAPDGCRDLSSPVWL*LPPPQT Trigger: GGTCTGGGGAGGTGGCAAGCATAGCCAGACTGGTGA...ACTTAAATCCCTGCAGCCATCTGGTGCTGGAGACCCAGCCTTGCCCAGGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| CDS-3UTR CCA 90 bp | CACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACAGGACACAAGCCAGCAGCAACCTaGCAAAGCTGGAGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSWDQEQQLPRSNHTTGHKPAAT*QSWREL Trigger: CAGCTCTCTCCAGCTTTGCCAGGTTGCTGCTGGCTT...GTGTCCTGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACTGTACAGGTGCAGGATCTCCGTCGCAGCTGCTGGGCCGATTGCTCTCTCCTTTTGTTTTCCCTTaGGGACGAGGGCTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GYCTGAGSPSQLLGRLLSPFVFP*GRGLSL Trigger: CAGTGAGAGCCCTCGTCCCCAAGGGAAAACAAAAGG...AGAGAGCAATCGGCCCAGCAGCTGCGACGGAGATCCTGCACCTGTACAGTAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
||
| CDS-3UTR TCA 90 bp | GGTTACTGTACAGGTGCAGGATCTCCGTCGCAGCTGCTGGGCCGATTGCTCTCTCTTCACGGGGCCTTGTaGAGTTCTGTTCTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYCTGAGSPSQLLGRLLSLHGAL*SSVLIV Trigger: GACAATGAGAACAGAACTTCACAAGGCCCCGTGAAG...AGAGAGCAATCGGCCCAGCAGCTGCGACGGAGATCCTGCACCTGTACAGTAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACCAGCCGCACGAGAGATaGGATATTGTAAAACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGDPLVGPGTATPTLQPHQPHER*DIVKLC Trigger: GCAGAGTTTTACAATATCGCATCTCTCGTGCGGCTG...GTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTCTTTGGTCCAGTTCAAGAAGCTGGGGGAGGAAGACGGGGTCAACCAGCTAGGGTCTGTCTGGTaGTCACGAAGTAGGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSLVQFKKLGEEDGVNQLGSVW*SRSRYR Trigger: GCGGTACCTACTTCGTGACCACCAGACAGACCCTAG...CTGGTTGACCCCGTCTTCCTCCCCCAGCTTCTTGAACTGGACCAAAGAGAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR CAA 72 bp | TGCTTCCTCTGGGCCCTGTGGACAGCATACAATCTGTaGTCAGCCTATCTAGCAAGGCAGGCTCAGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CFLWALWTAYNL*SAYLARQAQSL Trigger: GAGGCTCTGAGCCTGCCTTGCTAGATAGGCTGACAACAGATTGTATGCTGTCCACAGGGCCCAGAGGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS-3UTR GCA 90 bp | AGAATGGTCCAAGCAGCTGCTCATGTCCATCATGGCGCACGCAGGCTGAGACCAGAGGAAGCTCGTAGCTaGAGAAGGAGTGGAAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RMVQAAAHVHHGARRLRPEEARS*RRSGRK Trigger: CTTTCTTCCACTCCTTCTGCAGCTACGAGCTTCCTC...TGGTCTCAGCCTGCGTGCGCCATGATGGACATGAGCAGCTGCTTGGACCATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS-3UTR CCA 90 bp | CAGGTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTTCTCCTGAAGAATCTTaGCCTTTTCGCTCGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: QVIHSWDQEQQLPRSNHTSPEES*PFRSAL Trigger: TAGAGCCGAGCGAAAAGGCCAAGATTCTTCAGGAGA...AGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103035.10 |
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| 3UTR CAA 72 bp | CCAAGCCATTACAGAGGCCCACAAAGTCCTTTCTCTTaGGTCCAGTTCAAGAAGCTGGGGGAGGAAGACGGG | + |
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Preference number: 4 (lower is better) Translates to: PSHYRGPQSPFS*VQFKKLGEEDG Trigger: CCCGTCTTCCTCCCCCAGCTTCTTGAACTGGACCAAAGAGAAAGGACTTTGTGGGCCTCTGTAATGGCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR GCA 90 bp | GTGATCCACTCGTGGGACCAGGAACAGCAACTCCCACGCTCCAACCACACTACACAGCCGCACGAGAGATaGGATATTGTAAAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VIHSWDQEQQLPRSNHTTQPHER*DIVKLC Trigger: GCAGAGTTTTACAATATCGCATCTCTCGTGCGGCTG...TGTAGTGTGGTTGGAGCGTGGGAGTTGCTGTTCCTGGTCCCACGAGTGGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CCA 90 bp | CCATTACAGAGGCCCACAAAGTCCTTTCTCTTTGGTCCAGTTCAAGAAGCTGGGCTAGGGTCTGTCTGGTaGTCACGAAGTAGGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: PLQRPTKSFLFGPVQEAGLGSVW*SRSRYR Trigger: GCGGTACCTACTTCGTGACCACCAGACAGACCCTAG...CCCAGCTTCTTGAACTGGACCAAAGAGAAAGGACTTTGTGGGCCTCTGTAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR GCA 90 bp | GCCTCTGAGGCTCTGTTCATAGGATTGTGGGTCCTTCAGCAACTTTGTTCTGTAAGGACCCTGTACACGTaGTTCACGGGGCCTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ASEALFIGLWVLQQLCSVRTLYT*FTGPCE Trigger: TTCACAAGGCCCCGTGAAGCACGTGTACAGGGTCCT...TACAGAACAAAGTTGCTGAAGGACCCACAATCCTATGAACAGAGCCTCAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CCA 90 bp | CATAGGATTGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCCAGGCCTAGGGTCTGTCTaGTGGTCACGAAGTAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: HRIVGPSATLFCTQNLGPGLGSV*WSRSRY Trigger: GTACCTACTTCGTGACCACCAGACAGACCCTAGGCC...TGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACAATCCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCCACCACACTAAGCAGTGTCCTACCTTaGCCTTTTCGCTCGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: CGSFSNFVLYPELGSTTLSSVLP*PFRSAL Trigger: TAGAGCCGAGCGAAAAGGCCAAGGTAGGACACTGCT...TAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS-3UTR TCA 90 bp | TCTTGCCAGGTACAGATGACCAGAAGGTTCTGTGCTGTTAGACCAAAGTTTTCCTCTAGCAGAGTGTGGTaGGAGGAAGCTCGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SCQVQMTRRFCAVRPKFSSSRVW*EEARSC Trigger: GCAGCTACGAGCTTCCTCTCACCACACTCTGCTAGA...GGAAAACTTTGGTCTAACAGCACAGAACCTTCTGGTCATCTGTACCTGGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS-3UTR GCA 90 bp | CCTATCAGCGCATGTTCAAGAGACAACCACAAACACACCACCACTTTTAGCTATCAGTCTGGCTATGCTTaGCACCTCCCCAGACCCAAC | + |
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Preference number: 4 (lower is better) Translates to: PISACSRDNHKHTTTFSYQSGYA*HLPRPN Trigger: GTTGGGTCTGGGGAGGTGGCAAGCATAGCCAGACTG...ATAGCTAAAAGTGGTGGTGTGTTTGTGGTTGTCTCTTGAACATGCGCTGATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| 3UTR CAA 72 bp | CCTTATCCTCCTGCCTCTGAGGCTCTGTTCATAGGATaGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PYPPASEALFIG*WVLQQLCSVPR Trigger: TCTGGGTACAGAACAAAGTTGCTGAAGGACCCACAATCCTATGAACAGAGCCTCAGAGGCAGGAGGATAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTAGCTATGACAATATGACACATTTGGCAGCGTCCACAGAACAGCCTTCCGGCCTAGGGTCTGTCTaGTGGTCACGAAGTAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TFSYDNMTHLAASTEQPSGLGSV*WSRSRY Trigger: GTACCTACTTCGTGACCACCAGACAGACCCTAGGCC...GGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR CAA 72 bp | CACACCACCACTTTTAGCTATGACAATATGACACATTaGGCAGCGTCCACAGAACAGCCTTCCTCACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HTTTFSYDNMTH*AASTEQPSSPQ Trigger: TTGGGGTGAGGAAGGCTGTTCTGTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGTGGTGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| 3UTR CAA 72 bp | GAGGAATGGATTGTCAAGGAGCAAGGCAGACACTACTaGAGTCTAGACACAAACAAGAGCCTTCACCATCCT | + |
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Preference number: 4 (lower is better) Translates to: EEWIVKEQGRHY*SLDTNKSLHHP Trigger: AGGATGGTGAAGGCTCTTGTTTGTGTCTAGACTCAAGTAGTGTCTGCCTTGCTCCTTGACAATCCATTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCCACCACACTAAGGAAGAGCCAATGCTaGTTAACTGTTCAAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: CGSFSNFVLYPELGSTTLRKSQC*LTVQIS Trigger: GGAAATTTGAACAGTTAATCAGCATTGGCTCTTCCT...TAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CAA 90 bp | TGTCCATCATGGCGCACGCAGGCTGAGACCAGGCACAGCTCAGGACAAGCCTTCCGGCAGAGGAAGGACTaGGGCTCCCGGCCTAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: CPSWRTQAETRHSSGQAFRQRKD*GSRPRV Trigger: GACCCTAGGCCGGGAGCCCAAGTCCTTCCTCTGCCG...GAAGGCTTGTCCTGAGCTGTGCCTGGTCTCAGCCTGCGTGCGCCATGATGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CAA 90 bp | CCTTTCTCTTTGGTCCAGTTCAAGAAGCTGGGGGAGGAAGACGGGGTCAACCAGCGGCAGAGGAAGGACTaGGGCTCCCGGCCTAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: PFSLVQFKKLGEEDGVNQRQRKD*GSRPRV Trigger: GACCCTAGGCCGGGAGCCCAAGTCCTTCCTCTGCCG...CTGGTTGACCCCGTCTTCCTCCCCCAGCTTCTTGAACTGGACCAAAGAGAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CAA 90 bp | GTCAACCAGGTAGGAAAAGGCTGCAGAAGCAGTTACAGCAACTGCTCAGTCCCGCGTGAGCTCTTCCTCTaGACACTGCAGGACCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: VNQVGKGCRSSYSNCSVPRELFL*TLQDPV Trigger: TACAGGGTCCTGCAGTGTCAAGAGGAAGAGCTCACG...CGGGACTGAGCAGTTGCTGTAACTGCTTCTGCAGCCTTTTCCTACCTGGTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CAA 90 bp | CCTTTCTCTTTGGTCCAGTTCAAGAAGCTGGGGGAGGAAGACGGGGTCAACCAGACTCTCCACCTCCTTTaGTTTTCCCTTGGGGACGAG | + |
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Preference number: 5 (lower is better) Translates to: PFSLVQFKKLGEEDGVNQTLHLL*FSLGDE Trigger: CTCGTCCCCAAGGGAAAACAAAAGGAGGTGGAGAGT...CTGGTTGACCCCGTCTTCCTCCCCCAGCTTCTTGAACTGGACCAAAGAGAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS GCA 90 bp | CTCACAGTCAGCACACAGGTTCTTCACAAGTGTGTAGTGTGTGTCTaGAGGGCACTTGGCCTTTTCGCTCGGCTCTATGACGATGCCATT | + |
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Preference number: 5 (lower is better) Translates to: LTVSTQVLHKCVVCV*RALGLFARLYDDAI Trigger: AATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGTGCCCTGCAGACACACACTACACACTTGTGAAGAACCTGTGTGCTGACTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123345.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGTCCTTCAGCAACTTTGTTCTGTACCCAGAACTTGGGTCCACCACACTAAAGCAGTGTCCTACCTaGGCCTTTTCGCTCGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: CGSFSNFVLYPELGSTTLKQCPT*AFSLGS Trigger: AGAGCCGAGCGAAAAGGCCAAGGTAGGACACTGCTT...TAGTGTGGTGGACCCAAGTTCTGGGTACAGAACAAAGTTGCTGAAGGACCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS TCA 90 bp | GACCCAACAAATCCTGATTTAAATCCAGCCTCTAGCAGAGTGTGGTaGGAGGAAGCTCGTAGCTGCAGAAGGAGTGGAAGAAAGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: DPTNPDLNPASSRVW*EEARSCRRSGRKPA Trigger: TGCTGGCTTTCTTCCACTCCTTCTGCAGCTACGAGCTTCCTCTCACCACACTCTGCTAGAGGCTGGATTTAAATCAGGATTTGTTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGACGGGGTCAACCAGGTAGGAAAAGGCTGCAGAAGCAGTTACAGCAACGAAGTTCTGTTCTCATaGTCTCGTATCCTTTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: EEDGVNQVGKGCRSSYSNEVLFS*SRILSL Trigger: TAAGGAAAGGATACGAGACAATGAGAACAGAACTTC...GTTGCTGTAACTGCTTCTGCAGCCTTTTCCTACCTGGTTGACCCCGTCTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS-3UTR CAA 90 bp | AAGGCTGCAGAAGCAGTTACAGCAACTGCTCAGTCCCGATGTCCATCTAGCACGGAAGTTCTGTTCTCATaGTCTCGTATCCTTTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: KAAEAVTATAQSRCPSSTEVLFS*SRILSL Trigger: TAAGGAAAGGATACGAGACAATGAGAACAGAACTTC...CGTGCTAGATGGACATCGGGACTGAGCAGTTGCTGTAACTGCTTCTGCAGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103035.10 ENSMUST00000106533.8 |
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| CDS CAA 72 bp | CAGAGGACAGCTGGGGGAAAGAAGCAGTGTCCTACCTaGGCCTTTTCGCTCGGCTCTATGACGATGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: QRTAGGKKQCPT*AFSLGSMTMPL Trigger: CAATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGGTAGGACACTGCTTCTTTCCCCCAGCTGTCCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS CAA 90 bp | ACAGGGAGGCAGAGGACAGCTGGGGGAAAGAAGCAGTGTCCTACCTaGGCCTTTTCGCTCGGCTCTATGACGATGCCATTGGTAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: TGRQRTAGGKKQCPT*AFSLGSMTMPLVEL Trigger: TAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGGTAGGACACTGCTTCTTTCCCCCAGCTGTCCTCTGCCTCCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS GCA 72 bp | AGCACACAGGTTCTTCACAAGTGTGTAGTGTGTGTCTaGAGGGCACTTGGCCTTTTCGCTCGGCTCTATGAC | + |
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Preference number: 6 (lower is better) Translates to: STQVLHKCVVCV*RALGLFARLYD Trigger: GTCATAGAGCCGAGCGAAAAGGCCAAGTGCCCTGCAGACACACACTACACACTTGTGAAGAACCTGTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123345.2 |
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| CDS TCA 72 bp | AATCCTGATTTAAATCCAGCCTCTAGCAGAGTGTGGTaGGAGGAAGCTCGTAGCTGCAGAAGGAGTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NPDLNPASSRVW*EEARSCRRSGR Trigger: TCTTCCACTCCTTCTGCAGCTACGAGCTTCCTCTCACCACACTCTGCTAGAGGCTGGATTTAAATCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS CAA 72 bp | ACCTTGGCCTTTTCGCTCGGCTCTATGACGATGCCATaGGTAGAATTATTTAGTTCTCTGGAGACAACACAG | + |
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Preference number: 6 (lower is better) Translates to: TLAFSLGSMTMP*VELFSSLETTQ Trigger: CTGTGTTGTCTCCAGAGAACTAAATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106533.8 |
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| CDS CAA 72 bp | CACTTGGCCTTTTCGCTCGGCTCTATGACGATGCCATaGGTAGAATTATTTAGTTCTCTGGAGACAACACAG | + |
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Preference number: 6 (lower is better) Translates to: HLAFSLGSMTMP*VELFSSLETTQ Trigger: CTGTGTTGTCTCCAGAGAACTAAATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123345.2 |
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| CDS CAA 72 bp | ATCTTGGCCTTTTCGCTCGGCTCTATGACGATGCCATaGGTAGAATTATTTAGTTCTCTGGAGACAACACAG | + |
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Preference number: 6 (lower is better) Translates to: ILAFSLGSMTMP*VELFSSLETTQ Trigger: CTGTGTTGTCTCCAGAGAACTAAATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103035.10 |
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