Pregenerated sensors for KCTD18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054770Ensembl transcript IDs: ENSMUST00000114410.10, ENSMUST00000161608.8, ENSMUST00000163061.8, ENSMUST00000164963.8
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCATCTGCACACCCAAACTGCTGGAAGCTTCTAGAGAGGGTGGCTaGGGGAAGCAGGCCTGGCCCCCTGCTGAGGCGGTGGGCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SICTPKLLEASREGG*GKQAWPPAEAVGRE Trigger: TTCCCTGCCCACCGCCTCAGCAGGGGGCCAGGCCTGCTTCCCCCAGCCACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR CCA 90 bp | CATCAGGCTGGTCTTTCCTGGTCTCCATCTGCACACCCAAACTGCTaGAAGCTTCTAGAGAGGGTGGCTGGGGGAAGCAGGCCTGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: HQAGLSWSPSAHPNC*KLLERVAGGSRPGP Trigger: GGGGCCAGGCCTGCTTCCCCCAGCCACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR GCA 90 bp | CTAGGAGCAGCTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTaGCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: LGAAGGVTLETSSAG*HTVASTGAPLHLTE Trigger: TTCTGTCAGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAGCTGCTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR GCA 90 bp | ACCCATCAGGCTGGTCTTTCCTGGTCTCCATCTGCACACCCAAACTaGTGGAAGCTTCTAGAGAGGGTGGCTGGGGGAAGCAGGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: THQAGLSWSPSAHPN*WKLLERVAGGSRPG Trigger: GCCAGGCCTGCTTCCCCCAGCCACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR GCA 90 bp | CCAAGCCCACTTTACCCATCAGGCTGGTCTTTCCTGGTCTCCATCTaGACACCCAAACTGCTGGAAGCTTCTAGAGAGGGTGGCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: PSPLYPSGWSFLVSI*TPKLLEASREGGWG Trigger: CCCCCAGCCACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATGGGTAAAGTGGGCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR CCA 90 bp | CTGTGGGACAAACAGGCCGTTCCAAGCCCACTTTACCCATCAGGCTaGTCTTTCCTGGTCTCCATCTGCACACCCAAACTGCTGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LWDKQAVPSPLYPSG*SFLVSICTPKLLEA Trigger: AGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATGGGTAAAGTGGGCTTGGAACGGCCTGTTTGTCCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR TCA 90 bp | TCTTCCCTGAGGGCTATCAGCCGCCTCTTTCGAATTGGGGCCATATaGCGCAGGCTTCCGTGTAAAGGCCGTTCTTCCAAAGTCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: SSLRAISRLFRIGAI*RRLPCKGRSSKVQH Trigger: GTGTTGGACTTTGGAAGAACGGCCTTTACACGGAAGCCTGCGTCATATGGCCCCAATTCGAAAGAGGCGGCTGATAGCCCTCAGGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR CCA 90 bp | AACAGGCCGTTCCAAGCCCACTTTACCCATCAGGCTGGTCTTTCCTaGTCTCCATCTGCACACCCAAACTGCTGGAAGCTTCTAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: NRPFQAHFTHQAGLS*SPSAHPNCWKLLER Trigger: CCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATGGGTAAAGTGGGCTTGGAACGGCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR TCA 90 bp | TTCCCAAGCATCAAAGGCATCCATCATTTTCTTCAACTCGGCTACTaGGTAATAGCTCCAAATGTACTGAACGTTGTTCCCCGCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: FPSIKGIHHFLQLGY*VIAPNVLNVVPRLS Trigger: AGAGAGGCGGGGAACAACGTTCAGTACATTTGGAGCTATTACTCAGTAGCCGAGTTGAAGAAAATGATGGATGCCTTTGATGCTTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR CCA 90 bp | CTTGACTTTAATTTGGGTACTTGTAGAAGGGCCCAAAAATCTGACTaGCTTAGGACCAGTCTTACAGTTCACACCTTCATCCTCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LDFNLGTCRRAQKSD*LRTSLTVHTFILFP Trigger: AGGGAAGAGGATGAAGGTGTGAACTGTAAGACTGGTCCTAAGCCAGTCAGATTTTTGGGCCCTTCTACAAGTACCCAAATTAAAGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR GCA 90 bp | AATAAAAACCAGAAATCAAACTGCACAGAGACCACCTCAGGAAAATaGAAAGTAAACAGTAACCCTAACCACAAAGTCTCCCTCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: NKNQKSNCTETTSGK*KVNSNPNHKVSLLS Trigger: GGAGAGGAGGGAGACTTTGTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTTTGATTTCTGGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 ENSMUST00000164963.8 |
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| 3UTR CCA 90 bp | CAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATaGCCCAATCACATGAGATCGCCATCTAAGCTTTCATTGTATTCC | + |
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Preference number: 1 (lower is better) Translates to: QLLTEQSKEPTWKIK*PNHMRSPSKLSLYS Trigger: GGAATACAATGAAAGCTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR GCA 90 bp | GTCAGTTTTTGTAGCATAGACACCAATAATTCTACTCTCACAGCTTaGACCAGATGTGTTAAGATAGTGGAGAACCCAAACTGTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: VSFCSIDTNNSTLTA*TRCVKIVENPNCWF Trigger: AAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTCTATGCTACAAAAACTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCATCGGGGGAAGCGGGAGCATGCCCAGAAGCCCCTGTGGCCACAGAGCACCGAATTGGGGCCATATaGCGCAGGCTTCCGTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: WASGEAGACPEAPVATEHRIGAI*RRLPCK Trigger: TTTACACGGAAGCCTGCGTCATATGGCCCCAATTCG...GTGCTCTGTGGCCACAGGGGCTTCTGGGCATGCTCCCGCTTCCCCCGATGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCTCTGGGCATCGGGGGAAGCGGGAGCATGCCCAGAAGCCCCTGTGGCCAATCCTTCCTCCCAGCTaGTTATCAATGGCATCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QSSGHRGKREHAQKPLWPILPPS*LSMASV Trigger: GACAGATGCCATTGATAAGCAGCTGGGAGGAAGGAT...TGGCCACAGGGGCTTCTGGGCATGCTCCCGCTTCCCCCGATGCCCAGAGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCAGCTTGATCACTCGAGGGGGTGGAGACTTCTTTTCAGAGAGGAGCACGCCCAGAAGCCCCTGTaGCCACAGAGCACTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PPQLDHSRGWRLLFREEHAQKPL*PQSTGL Trigger: CAGCCCAGTGCTCTGTGGCCACAGGGGCTTCTGGGC...GTGCTCCTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATCAAGCTGAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCATCGGGGGAAGCGGGAGCATGCCCAGAAGCCCCTGTGGCCACAGAGCACGCCCAAAAATCTGACTaGCTTAGGACCAGTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: WASGEAGACPEAPVATEHAQKSD*LRTSLT Trigger: TGTAAGACTGGTCCTAAGCCAGTCAGATTTTTGGGC...GTGCTCTGTGGCCACAGGGGCTTCTGGGCATGCTCCCGCTTCCCCCGATGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGGTCTCCATCTGCACACCCAAACTGCTGGAAGCTTCTAGAGAGGGTGGCCGGTTTGCTGTAGCCTaGGAGGAGATCTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLVSICTPKLLEASREGGRFAVA*EEIWAA Trigger: TGCTGCCCAGATCTCCTCTCAGGCTACAGCAAACCG...GCCACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTCTGGGCATCGGGGGAAGCGGGAGCATGCCCAGAAGCCCCTGTGGCCAACCTGGAAAATAAAATaGCCCAATCACATGAGATCG | + |
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Preference number: 2 (lower is better) Translates to: QSSGHRGKREHAQKPLWPTWKIK*PNHMRS Trigger: CGATCTCATGTGATTGGGCCATTTTATTTTCCAGGT...TGGCCACAGGGGCTTCTGGGCATGCTCCCGCTTCCCCCGATGCCCAGAGCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATTGGTGGGGTCACACTTaGGACCTCTTCTGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LKAMQCTAQPLSKERLLYWWGHT*DLFCWL Trigger: CAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCA...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTCATCATGAGTATGCCTaGCTCACTTTCTCAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: DLFCWLPHCGQHRCPSPSHHEYA*LTFSKQ Trigger: TTGCTTTGAGAAAGTGAGGCAGGCATACTCATGATG...AGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGTCTCCATCTGCACACCCAAACTGCTGGAAGCTTCTAGAGAGGGTGGCCTGGAGGTGGGTGTGTaGCTTGGTTTTCAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FLVSICTPKLLEASREGGLEVGV*LGFQSS Trigger: AGAGCTCTGAAAACCAAGCCACACACCCACCTCCAG...GCCACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGAAGTGCCCCTCTCCATCTaGCAGAAACCTAGGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KAMQCTAQPLSKERLLYEVPLSI*QKPRPR Trigger: TCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCAC...TTCATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACTTCAACTCGGCTACTaGGTAATAGCTCCAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: LVGSHLRPLLLAATLWPALQLGY*VIAPNV Trigger: TACATTTGGAGCTATTACTCAGTAGCCGAGTTGAAG...TGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGAACCTCCTCTCCTCCCATaGCACGGCATCCACTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: KAMQCTAQPLSKERLLYEPPLLP*HGIHFS Trigger: GGAAAAGTGGATGCCGTGGCATGGGAGGAGAGGAGG...TTCATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACTCTAGAGAGGGTGGCTaGGGGAAGCAGGCCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NCTETTSGKCKVNSNPNHSREGG*GKQAWP Trigger: GGGCCAGGCCTGCTTCCCCCAGCCACCCTCTCTAGA...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCAAGACTTCTTACTGCTTaGTTGCCTTGGTATCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LVGSHLRPLLLAATLWPARLLTA*LPWYQL Trigger: TAACTGATACCAAGGCAACCAAGCAGTAAGAAGTCT...TGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTAGTAAAGAGCCAACCTaGAAAATAAAATGGCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: DLFCWLPHCGQHRCPSPSSKEPT*KIKWPN Trigger: ATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACT...AGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTGATCACTCGAGGGGGTaGAGACTTCTTTTCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRDHSRG*RLLFRE Trigger: CTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATC...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTGGGGAGACTTCTTACTaGTTGGTTGCCTTGGTATCA | + |
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Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRGETSY*LVALVS Trigger: TGATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCC...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGTTCTTCCAAAGTCCAACACTCTATCAGCTCATGAGGCACACGCCAGTAGCATCCTTCCTCCCAGCTaGTTATCAATGGCATCTGTC | + |
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Preference number: 2 (lower is better) Translates to: AVLPKSNTLSAHEAHASSILPPS*LSMASV Trigger: GACAGATGCCATTGATAAGCAGCTGGGAGGAAGGAT...GCTACTGGCGTGTGCCTCATGAGCTGATAGAGTGTTGGACTTTGGAAGAACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR CCA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTCTGGCTGCCACACTGTaGCCAGCACAGGTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPLAATL*PAQVPL Trigger: GAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAG...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACGTGGCCACAGAGCACTaGGCTGCCTTTCCACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: NCTETTSGKCKVNSNPNHVATEH*AAFPQL Trigger: CAGCTGTGGAAAGGCAGCCCAGTGCTCTGTGGCCAC...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATGTTATCTTTGGAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTGCACTGCCCAGCCTCTaGGTAAGGAACGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FMLSLEKKQLGAAGGVTLALPSL*VRNACS Trigger: AGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGC...AAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTCCAAAGATAACATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTGACACCCTCACTGAAGCAGAGTTCTTGACTTTAATTTGGGTACTTGTACTTCATCCTCTTCCCTaGGGGCTATCAGCCGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGDTLTEAEFLTLIWVLVLHPLP*GLSAAS Trigger: AGAGGCGGCTGATAGCCCTCAGGGAAGAGGATGAAG...TACAAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGTGAGGGTGTCACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCTGGCTGCCACACTGTaGCCAGCACAGGTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWLAATL*PAQVPL Trigger: GAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAG...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGATCGCCATCTAAGGTGCCCCTCTCCATCTaGCAGAAACCTAGGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KEPTWKIKWPNHMRSPSKVPLSI*QKPRPR Trigger: TCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCAC...CTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTAAAATGCTTTTACTATaGATCCTTCCTCCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRKMLLL*ILPPSC Trigger: GCAGCTGGGAGGAAGGATTCATAGTAAAAGCATTTT...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTCTTCAACTCGGCTACTaGGTAATAGCTCCAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRLQLGY*VIAPNV Trigger: TACATTTGGAGCTATTACTCAGTAGCCGAGTTGAAG...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTCGGTTTGCTGTAGCCTaGGAGGAGATCTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EDSNTTVKRGDFLLLGCLRFAVA*EEIWAA Trigger: TGCTGCCCAGATCTCCTCTCAGGCTACAGCAAACCG...AAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGATCGCCATCTAAGCCTCCTCTCCTCCCATaGCACGGCATCCACTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: KEPTWKIKWPNHMRSPSKPPLLP*HGIHFS Trigger: GGAAAAGTGGATGCCGTGGCATGGGAGGAGAGGAGG...CTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCATCAAAGGCATCCATCATTTTCTTCAACTCGGCTACTGAGTAATAGCTCCCCTCCTCTCCTCCCATaGCACGGCATCCACTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: KHQRHPSFSSTRLLSNSSPPLLP*HGIHFS Trigger: GGAAAAGTGGATGCCGTGGCATGGGAGGAGAGGAGG...GGAGCTATTACTCAGTAGCCGAGTTGAAGAAAATGATGGATGCCTTTGATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATGTTATCTTTGGAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTACCTCTTCTGCTGGCTaGCACACTGTGGCCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: FMLSLEKKQLGAAGGVTLTSSAG*HTVAST Trigger: TGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGT...AAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTCCAAAGATAACATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTCAGAGAGGAGCACCTTaGCTGGAGGTGGGTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPQRGAP*LEVGVW Trigger: CCACACACCCACCTCCAGCCAAGGTGCTCCTCTCTG...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR-3UTR GCA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTACCTCTTCTGCTGGCTaGCACACTGTGGCCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPTSSAG*HTVAST Trigger: TGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGT...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACAGAGCTCCTACCACATaGATTCCCCCTTGTGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NCTETTSGKCKVNSNPNHRAPTT*IPPCGA Trigger: TGCACCACAAGGGGGAATGCATGTGGTAGGAGCTCT...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTTCTACTCTCACAGCTTaGACCAGATGTGTTAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRSTLTA*TRCVKI Trigger: TATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGA...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTAGACTTCTTACTGCTTaGTTGCCTTGGTATCAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRRLLTA*LPWYQL Trigger: TAACTGATACCAAGGCAACCAAGCAGTAAGAAGTCT...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTACCTGGAAAATAAAATaGCCCAATCACATGAGATCG | + |
|
Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRTWKIK*PNHMRS Trigger: CGATCTCATGTGATTGGGCCATTTTATTTTCCAGGT...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTATCAGAAGGACCCAATaGTCACTTCTAAACCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRIRRTQ*SLLNQL Trigger: TAGTTGGTTTAGAAGTGACCATTGGGTCCTTCTGAT...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTTGGTTTTCAGAGCTCTaGGCATCGGGGGAAGCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPWFSEL*ASGEAG Trigger: TCCCGCTTCCCCCGATGCCCAGAGCTCTGAAAACCA...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR CAA 90 bp | ATCTGGGCAGCATTGGCAGGTGACACCCTCACTGAAGCAGAGTTCTaGACTTTAATTTGGGTACTTGTAGAAGGGCCCAAAAATCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: IWAALAGDTLTEAEF*TLIWVLVEGPKNLT Trigger: AGTCAGATTTTTGGGCCCTTCTACAAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGTGAGGGTGTCACCTGCCAATGCTGCCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGGTGCCCCTCTCCATCTaGCAGAAACCTAGGCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWVPLSI*QKPRPR Trigger: TCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCAC...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGACCTCCTCTCCTCCCATaGCACGGCATCCACTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRPPLLP*HGIHFS Trigger: GGAAAAGTGGATGCCGTGGCATGGGAGGAGAGGAGG...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGACCTCTTCTGCTGGCTaGCACACTGTGGCCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWTSSAG*HTVAST Trigger: TGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGT...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACTCTATCAGCTCATGAGGCACACGCCAGTAGCTTACCCCTTTTCCTTCCCATCTACTCTCACAGCTTaGACCAGATGTGTTAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: TLYQLMRHTPVAYPFSFPSTLTA*TRCVKI Trigger: TATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGA...TGGGAAGGAAAAGGGGTAAGCTACTGGCGTGTGCCTCATGAGCTGATAGAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCAGTTAACTATTTAAATAAATGGTGGGGTCACACTTaGGACCTCTTCTGCTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GETSYCLVALVSVNYLNKWWGHT*DLFCWL Trigger: CAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCA...TTTATTTAAATAGTTAACTGATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTGAGACCTCTTCTGCTAGACTTCTTACTGCTTaGTTGCCTTGGTATCAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: EKKQLGAAGGVTLETSSARLLTA*LPWYQL Trigger: TAACTGATACCAAGGCAACCAAGCAGTAAGAAGTCT...AGCAGAAGAGGTCTCAAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGAAACCTGGAAAATAAAATaGCCCAATCACATGAGATCG | + |
|
Preference number: 2 (lower is better) Translates to: KAMQCTAQPLSKERLLYETWKIK*PNHMRS Trigger: CGATCTCATGTGATTGGGCCATTTTATTTTCCAGGT...TTCATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATAGTAAAGAGCCAACCTaGAAAATAAAATGGCCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LKAMQCTAQPLSKERLLYSKEPT*KIKWPN Trigger: ATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACT...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCACTTTCTCAAAGCAATaGAATGCACTGCCCAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SNTTVKRGDFLLLGCLGITFSKQ*NALPSL Trigger: GAGGCTGGGCAGTGCATTGCATTGCTTTGAGAAAGT...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGTGACACCCTCACTGAAGCAGAGTTCTTGACTTTAATTTGGGTACTTGTAGCCCAAAAATCTGACTaGCTTAGGACCAGTCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: AGDTLTEAEFLTLIWVLVAQKSD*LRTSLT Trigger: TGTAAGACTGGTCCTAAGCCAGTCAGATTTTTGGGC...TACAAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGTGAGGGTGTCACCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGTGACACCCTCACTGAAGCAGAGTTCTTGACTTTAATTTGGGTACTTGTAAAAATGCTTTTACTATaGATCCTTCCTCCCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AGDTLTEAEFLTLIWVLVKMLLL*ILPPSC Trigger: GCAGCTGGGAGGAAGGATTCATAGTAAAAGCATTTT...TACAAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGTGAGGGTGTCACCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGTTCCTGGTCTCCATCTaGACACCCAAACTGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWFLVSI*TPKLLE Trigger: TTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAA...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCATCAGAAGGACCCAATaGTCACTTCTAAACCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: SNTTVKRGDFLLLGCLGIIRRTQ*SLLNQL Trigger: TAGTTGGTTTAGAAGTGACCATTGGGTCCTTCTGAT...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTATCAGAAGGACCCAATaGTCACTTCTAAACCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPIRRTQ*SLLNQL Trigger: TAGTTGGTTTAGAAGTGACCATTGGGTCCTTCTGAT...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGAGTAAAGAGCCAACCTaGAAAATAAAATGGCCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWSKEPT*KIKWPN Trigger: ATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACT...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTCTGGGCATCGGGGGAAGCGGGAGCATGCCCAGAAGCCCCTGTGGCCAGAGATCTGGGCAGCATaGGCAGGTGACACCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: QSSGHRGKREHAQKPLWPEIWAA*AGDTLT Trigger: AGTGAGGGTGTCACCTGCCAATGCTGCCCAGATCTC...TGGCCACAGGGGCTTCTGGGCATGCTCCCGCTTCCCCCGATGCCCAGAGCTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR CCA 72 bp | GCTGGAGGTGGGTGTGTGGCTTGGTTTTCAGAGCTCTaGGCATCGGGGGAAGCGGGAGCATGCCCAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGGGCVAWFSEL*ASGEAGACPEA Trigger: GGCTTCTGGGCATGCTCCCGCTTCCCCCGATGCCCAGAGCTCTGAAAACCAAGCCACACACCCACCTCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTGGAGTCCTCCTCAGCTaGATCACTCGAGGGGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLFCWLPHCGQHRCPSPSGVLLS*ITRGGG Trigger: TCCACCCCCTCGAGTGATCAAGCTGAGGAGGACTCC...AGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR GCA 72 bp | GCTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTaGCACACTGTGGCCAGCACAGGTGCCCCTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: AGGVTLETSSAG*HTVASTGAPLH Trigger: ATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR GCA 72 bp | CTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTaGCCCTCTCCATCTGACAGAAACCTAGGCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFCWLPHCGQHR*PSPSDRNLGPD Trigger: GTCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR GCA 72 bp | GGCTGCCTTTCCACAGCTGCCTCTGTGAGAGCGGTTTaGTGTAGCCTGAGAGGAGATCTGGGCAGCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GCLSTAASVRAV*CSLRGDLGSIG Trigger: GCCAATGCTGCCCAGATCTCCTCTCAGGCTACAGCAAACCGCTCTCACAGAGGCAGCTGTGGAAAGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTCAGCTTGATCACTCGAGGGGGTGGAGACTTCTTTTCAGAGAGGAGCACAGGTGGGTGTGTGGCTaGGTTTTCAGAGCTCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPQLDHSRGWRLLFREEHRWVCG*VFRALG Trigger: GCCCAGAGCTCTGAAAACCAAGCCACACACCCACCT...GTGCTCCTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATCAAGCTGAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR CCA 72 bp | CAGTGGAGTCCTCCTCAGCTTGATCACTCGAGGGGGTaGAGACTTCTTTTCAGAGAGGAGCACCTTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QWSPPQLDHSRG*RLLFREEHLGW Trigger: CCAGCCAAGGTGCTCCTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATCAAGCTGAGGAGGACTCCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTGAGACTTCTTACTGCTaGGTTGCCTTGGTATCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DLFCWLPHCGQHRCPSPSETSYC*VALVSV Trigger: AACTGATACCAAGGCAACCAAGCAGTAAGAAGTCTC...AGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGAAGCCGCCTCTTTCGAATaGGGGCCATATGACGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KAMQCTAQPLSKERLLYEAASFE*GPYDAG Trigger: GCCTGCGTCATATGGCCCCAATTCGAAAGAGGCGGC...TTCATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR TCA 72 bp | AGGGCTATCAGCCGCCTCTTTCGAATTGGGGCCATATaGCGCAGGCTTCCGTGTAAAGGCCGTTCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RAISRLFRIGAI*RRLPCKGRSSK Trigger: TTTGGAAGAACGGCCTTTACACGGAAGCCTGCGTCATATGGCCCCAATTCGAAAGAGGCGGCTGATAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR TCA 72 bp | GACCAGTCTTACAGTTCACACCTTCATCCTCTTCCCTaGGGGCTATCAGCCGCCTCTTTCGAATTGGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DQSYSSHLHPLP*GLSAASFELGP Trigger: TGGCCCCAATTCGAAAGAGGCGGCTGATAGCCCTCAGGGAAGAGGATGAAGGTGTGAACTGTAAGACTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR CCA 72 bp | AGACTTCTTTTCAGAGAGGAGCACCTTGGCTGGAGGTaGGTGTGTGGCTTGGTTTTCAGAGCTCTGGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RLLFREEHLGWR*VCGLVFRALGI Trigger: GATGCCCAGAGCTCTGAAAACCAAGCCACACACCCACCTCCAGCCAAGGTGCTCCTCTCTGAAAAGAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR CCA 72 bp | AAACAGGCCGTTCCAAGCCCACTTTACCCATCAGGCTaGTCTTTCCTGGTCTCCATCTGCACACCCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KQAVPSPLYPSG*SFLVSICTPKL Trigger: CAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATGGGTAAAGTGGGCTTGGAACGGCCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR GCA 72 bp | CTTTACCCATCAGGCTGGTCTTTCCTGGTCTCCATCTaGACACCCAAACTGCTGGAAGCTTCTAGAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LYPSGWSFLVSI*TPKLLEASREG Trigger: ACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAAAGACCAGCCTGATGGGTAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTCAGCTTGATCACTCGAGGGGGTGGAGACTTCTTTTCAGAGAGGAGCACGAGACTTCTTACTGCTaGGTTGCCTTGGTATCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPQLDHSRGWRLLFREEHETSYC*VALVSV Trigger: AACTGATACCAAGGCAACCAAGCAGTAAGAAGTCTC...GTGCTCCTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATCAAGCTGAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGAGGAGATCTGGGCAGCATTGGCAGGTGACACCCTCACTGAAGCAGAGTGGAGAACCCAAACTGTaGGTTTATTGCAAACTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PERRSGQHWQVTPSLKQSGEPKL*VYCKLS Trigger: GCTTAGTTTGCAATAAACCAACAGTTTGGGTTCTCC...ACTCTGCTTCAGTGAGGGTGTCACCTGCCAATGCTGCCCAGATCTCCTCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCCTGGTGGGGTCACACTaGAGACCTCTTCTGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SNTTVKRGDFLLLGCLGILVGSH*RPLLLA Trigger: AGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTCTGGTGGGGTCACACTaGAGACCTCTTCTGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPLVGSH*RPLLLA Trigger: AGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCTGGTGGGGTCACACTaGAGACCTCTTCTGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWLVGSH*RPLLLA Trigger: AGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTTCATGGGAAGTAGAATaGCACAGTGTAATTACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRSWEVE*HSVITK Trigger: TTTGGTAATTACACTGTGCAATTCTACTTCCCATGA...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACTCTATCAGCTCATGAGGCACACGCCAGTAGCTTACCCCTTTTCCTTCCCATACTGCTTGGTTGCCTaGGTATCAGTTAACTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TLYQLMRHTPVAYPFSFPYCLVA*VSVNYL Trigger: TAAATAGTTAACTGATACCAAGGCAACCAAGCAGTA...TGGGAAGGAAAAGGGGTAAGCTACTGGCGTGTGCCTCATGAGCTGATAGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161608.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTCCATCTAAGCTTTCATaGTATTCCTCCCCTTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DSNTTVKRGDFLLLGCLGPSKLS*YSSPFP Trigger: GGGGAAAGGGGAGGAATACAATGAAAGCTTAGATGG...ACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTGAGACCTCTTCTGCTTACTGCTTGGTTGCCTaGGTATCAGTTAACTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: EKKQLGAAGGVTLETSSAYCLVA*VSVNYL Trigger: TAAATAGTTAACTGATACCAAGGCAACCAAGCAGTA...AGCAGAAGAGGTCTCAAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR CCA 72 bp | AATTTGGGTACTTGTAGAAGGGCCCAAAAATCTGACTaGCTTAGGACCAGTCTTACAGTTCACACCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: NLGTCRRAQKSD*LRTSLTVHTFI Trigger: GATGAAGGTGTGAACTGTAAGACTGGTCCTAAGCCAGTCAGATTTTTGGGCCCTTCTACAAGTACCCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGACACCCTCACTGAAGCAGAGTTCTTGACTTTAATTTGGGTACTTGTAGGAGAACCCAAACTGTaGGTTTATTGCAAACTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGDTLTEAEFLTLIWVLVGEPKL*VYCKLS Trigger: GCTTAGTTTGCAATAAACCAACAGTTTGGGTTCTCC...TACAAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGTGAGGGTGTCACCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR GCA 72 bp | CAGAAATCAAACTGCACAGAGACCACCTCAGGAAAATaGAAAGTAAACAGTAACCCTAACCACAAAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKSNCTETTSGK*KVNSNPNHKVS Trigger: GGAGACTTTGTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTTTGATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCTGGAAAATAAAATGGCCCAATCACATGAGATCGCCATCTAAGCTTTCACTTCTTACTGCTTGGTaGCCTTGGTATCAGTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: PTWKIKWPNHMRSPSKLSLLTAW*PWYQLT Trigger: AGTTAACTGATACCAAGGCAACCAAGCAGTAAGAAG...TGAAAGCTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR TCA 72 bp | ATCAAAGGCATCCATCATTTTCTTCAACTCGGCTACTaGGTAATAGCTCCAAATGTACTGAACGTTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IKGIHHFLQLGY*VIAPNVLNVVP Trigger: GGGAACAACGTTCAGTACATTTGGAGCTATTACTCAGTAGCCGAGTTGAAGAAAATGATGGATGCCTTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR GCA 72 bp | TGTAGCATAGACACCAATAATTCTACTCTCACAGCTTaGACCAGATGTGTTAAGATAGTGGAGAACCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSIDTNNSTLTA*TRCVKIVENPN Trigger: GTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTCTATGCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTCTTCTTACTGCTTGGTaGCCTTGGTATCAGTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPLLTAW*PWYQLT Trigger: AGTTAACTGATACCAAGGCAACCAAGCAGTAAGAAG...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGGAGACTTCTTACTGCTaGGTTGCCTTGGTATCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWETSYC*VALVSV Trigger: AACTGATACCAAGGCAACCAAGCAGTAAGAAGTCTC...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCTCATGGGAAGTAGAATaGCACAGTGTAATTACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SNTTVKRGDFLLLGCLGISWEVE*HSVITK Trigger: TTTGGTAATTACACTGTGCAATTCTACTTCCCATGA...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR CCA 72 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATaGCCCAATCACATGAGATCGCCATCTAAGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TEQSKEPTWKIK*PNHMRSPSKLS Trigger: TGAAAGCTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGATACTGCTTGGTTGCCTaGGTATCAGTTAACTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRYCLVA*VSVNYL Trigger: TAAATAGTTAACTGATACCAAGGCAACCAAGCAGTA...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTCGGTTTGCTGTAGCCTaGGAGGAGATCTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLFCWLPHCGQHRCPSPSRFAVA*EEIWAA Trigger: TGCTGCCCAGATCTCCTCTCAGGCTACAGCAAACCG...AGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCATGGTTTTCAGAGCTCTaGGCATCGGGGGAAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVGSHLRPLLLAATLWPAWFSEL*ASGEAG Trigger: TCCCGCTTCCCCCGATGCCCAGAGCTCTGAAAACCA...TGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCACAGGTGCCCCTCTCCATCTCGAATTGGGGCCATATaGCGCAGGCTTCCGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLFCWLPHCGQHRCPSPSRIGAI*RRLPCK Trigger: TTTACACGGAAGCCTGCGTCATATGGCCCCAATTCG...AGATGGAGAGGGGCACCTGTGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTTCTAGAGAGGGTGGCTaGGGGAAGCAGGCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRSREGG*GKQAWP Trigger: GGGCCAGGCCTGCTTCCCCCAGCCACCCTCTCTAGA...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACAGGTGCCCCTCTCCATCTGACAGAAACCTAGGCCCAGACCTCACTCCTACGTCTTCTGCTTCATaGCCTGCCATTGCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHRCPSPSDRNLGPDLTPTSSAS*PAIAPF Trigger: GAAGGGAGCAATGGCAGGCCATGAAGCAGAAGACGT...AGGAGTGAGGTCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCACCTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTGTGGCCACAGAGCACTaGGCTGCCTTTCCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRVATEH*AAFPQL Trigger: CAGCTGTGGAAAGGCAGCCCAGTGCTCTGTGGCCAC...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATCAGAGAGGAGCACCTTaGCTGGAGGTGGGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAMQCTAQPLSKERLLYQRGAP*LEVGVW Trigger: CCACACACCCACCTCCAGCCAAGGTGCTCCTCTCTG...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACAGGTGCCCCTCTCCATCTGACAGAAACCTAGGCCCAGACCTCACTCCTGATCACTCGAGGGGGTaGAGACTTCTTTTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHRCPSPSDRNLGPDLTPDHSRG*RLLFRE Trigger: CTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATC...AGGAGTGAGGTCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCACCTGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGGGCCTGGCCCCCTGCTaGGGCGGTGGGCAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWGLAPC*GGGQGR Trigger: CCTTCCCTGCCCACCGCCTCAGCAGGGGGCCAGGCC...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGAGGCCTGGCCCCCTGCTaGGGCGGTGGGCAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRGLAPC*GGGQGR Trigger: CCTTCCCTGCCCACCGCCTCAGCAGGGGGCCAGGCC...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACAGGTGCCCCTCTCCATCTGACAGAAACCTAGGCCCAGACCTCACTCCTATCCTTCCTCCCAGCTaGTTATCAATGGCATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHRCPSPSDRNLGPDLTPILPPS*LSMASV Trigger: GACAGATGCCATTGATAAGCAGCTGGGAGGAAGGAT...AGGAGTGAGGTCTGGGCCTAGGTTTCTGTCAGATGGAGAGGGGCACCTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114410.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTAAACAGTAACCCTAACCACAAAGTCTCCCTCCTCTCCTCCCATGCCACGGAGGAGCACCTTGGCTaGAGGTGGGTGTGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVNSNPNHKVSLLSSHATEEHLG*RWVCGL Trigger: CAAGCCACACACCCACCTCCAGCCAAGGTGCTCCTC...CGTGGCATGGGAGGAGAGGAGGGAGACTTTGTGGTTAGGGTTACTGTTTACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTCGAATTGGGGCCATATaGCGCAGGCTTCCGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRRIGAI*RRLPCK Trigger: TTTACACGGAAGCCTGCGTCATATGGCCCCAATTCG...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTAAACAGTAACCCTAACCACAAAGTCTCCCTCCTCTCCTCCCATGCCACGCTTCATCCTCTTCCCTaGGGGCTATCAGCCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVNSNPNHKVSLLSSHATLHPLP*GLSAAS Trigger: AGAGGCGGCTGATAGCCCTCAGGGAAGAGGATGAAG...CGTGGCATGGGAGGAGAGGAGGGAGACTTTGTGGTTAGGGTTACTGTTTACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTGAGACCTCTTCTGCTTGGTTTTCAGAGCTCTaGGCATCGGGGGAAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKKQLGAAGGVTLETSSAWFSEL*ASGEAG Trigger: TCCCGCTTCCCCCGATGCCCAGAGCTCTGAAAACCA...AGCAGAAGAGGTCTCAAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTCTGGAGGTGGGTGTGTaGCTTGGTTTTCAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRLEVGV*LGFQSS Trigger: AGAGCTCTGAAAACCAAGCCACACACCCACCTCCAG...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | ACACTCTATCAGCTCATGAGGCACACGCCAGTAGCTTACCCCTTTTCCTTCCCATTCTGCTTCATGGCCTaGCATTGCTCCCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLYQLMRHTPVAYPFSFPFCFMA*HCSLRC Trigger: GCATCGAAGGGAGCAATGGCAGGCCATGAAGCAGAA...TGGGAAGGAAAAGGGGTAAGCTACTGGCGTGTGCCTCATGAGCTGATAGAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGAACCGCCTCTTTCGAATTaGGGCCATATGACGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAMQCTAQPLSKERLLYEPPLSN*GHMTQA Trigger: AGCCTGCGTCATATGGCCCCAATTCGAAAGAGGCGG...TTCATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGAGTAACACTGAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCGCCCAGAAGCCCCTGTaGCCACAGAGCACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCRSNTEDSNTTVKRGDFAQKPL*PQSTGL Trigger: CAGCCCAGTGCTCTGTGGCCACAGGGGCTTCTGGGC...GAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTCAGTGTTACTCCTACAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGTTATCTTTGGAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTTCTAGAGAGGGTGGCTaGGGGAAGCAGGCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FMLSLEKKQLGAAGGVTLSREGG*GKQAWP Trigger: GGGCCAGGCCTGCTTCCCCCAGCCACCCTCTCTAGA...AAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTCCAAAGATAACATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGCACACCCAAACTGCTaGAAGCTTCTAGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKAMQCTAQPLSKERLLYAHPNC*KLLERV Trigger: CACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGC...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCAAGTCCAAAATGTATTTaGATAGATGTCCATCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVGSHLRPLLLAATLWPASPKCI*IDVHHG Trigger: ACCGTGATGGACATCTATTCAAATACATTTTGGACT...TGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATATCTCATTGGCCAAGTaGTCAGACAAGCTGTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAMQCTAQPLSKERLLYISLAK*SDKLYG Trigger: CCCGTACAGCTTGTCTGACCACTTGGCCAATGAGAT...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTGCCCAGAAGCCCCTGTaGCCACAGAGCACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPAQKPL*PQSTGL Trigger: CAGCCCAGTGCTCTGTGGCCACAGGGGCTTCTGGGC...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACGAGGAGCACCTTGGCTaGAGGTGGGTGTGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NCTETTSGKCKVNSNPNHEEHLG*RWVCGL Trigger: CAAGCCACACACCCACCTCCAGCCAAGGTGCTCCTC...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGATCACTCGAGGGGGTaGAGACTTCTTTTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKAMQCTAQPLSKERLLYDHSRG*RLLFRE Trigger: CTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATC...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTGAGACCTCTTCTGCTTTCCTGGTCTCCATCTaGACACCCAAACTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKKQLGAAGGVTLETSSAFLVSI*TPKLLE Trigger: TTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAA...AGCAGAAGAGGTCTCAAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTAAACAGTAACCCTAACCACAAAGTCTCCCTCCTCTCCTCCCATGCCACGATCTCATTGGCCAAGTaGTCAGACAAGCTGTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVNSNPNHKVSLLSSHATISLAK*SDKLYG Trigger: CCCGTACAGCTTGTCTGACCACTTGGCCAATGAGAT...CGTGGCATGGGAGGAGAGGAGGGAGACTTTGTGGTTAGGGTTACTGTTTACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGAGTAACACTGAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCGTGGCCACAGAGCACTaGGCTGCCTTTCCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCRSNTEDSNTTVKRGDFVATEH*AAFPQL Trigger: CAGCTGTGGAAAGGCAGCCCAGTGCTCTGTGGCCAC...GAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTCAGTGTTACTCCTACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGAGTAACACTGAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCCAGAGAGGAGCACCTTaGCTGGAGGTGGGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCRSNTEDSNTTVKRGDFQRGAP*LEVGVW Trigger: CCACACACCCACCTCCAGCCAAGGTGCTCCTCTCTG...GAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTCAGTGTTACTCCTACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCAATGCAATGCACTGCCCAGCCTCTGAGTAAGGAACGCCTGCTCTATGCCCAAAAATCTGACTaGCTTAGGACCAGTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LKAMQCTAQPLSKERLLYAQKSD*LRTSLT Trigger: TGTAAGACTGGTCCTAAGCCAGTCAGATTTTTGGGC...ATAGAGCAGGCGTTCCTTACTCAGAGGCTGGGCAGTGCATTGCATTGCTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCAGCTTGATCACTCGAGGGGGTGGAGACTTCTTTTCAGAGAGGAGCACAGTCCAAAATGTATTTaGATAGATGTCCATCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDHSRGWRLLFREEHSPKCI*IDVHHG Trigger: ACCGTGATGGACATCTATTCAAATACATTTTGGACT...GTGCTCCTCTCTGAAAAGAAGTCTCCACCCCCTCGAGTGATCAAGCTGAGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR GCA 90 bp | GACTCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTTTCTGCTTCATGGCCTaGCATTGCTCCCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DSNTTVKRGDFLLLGCLGFCFMA*HCSLRC Trigger: GCATCGAAGGGAGCAATGGCAGGCCATGAAGCAGAA...ACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGACACCCTCACTGAAGCAGAGTTCTTGACTTTAATTTGGGTACTTGTATTCTGCTTCATGGCCTaGCATTGCTCCCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AGDTLTEAEFLTLIWVLVFCFMA*HCSLRC Trigger: GCATCGAAGGGAGCAATGGCAGGCCATGAAGCAGAA...TACAAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGTGAGGGTGTCACCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGAGCCGGGCTGTGTAGATaGAGCCACCCACATTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRAGLCR*SHPHSA Trigger: GGCTGAATGTGGGTGGCTGCATCTACACAGCCCGGC...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCCCGCCTCTTTCGAATTaGGGCCATATGACGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNTTVKRGDFLLLGCLGIPPLSN*GHMTQA Trigger: AGCCTGCGTCATATGGCCCCAATTCGAAAGAGGCGG...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACCTGGAGGTGGGTGTGTaGCTTGGTTTTCAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NCTETTSGKCKVNSNPNHLEVGV*LGFQSS Trigger: AGAGCTCTGAAAACCAAGCCACACACCCACCTCCAG...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTAAACAGTAACCCTAACCACAAAGTCTCCCTCCTCTCCTCCCATGCCACGAAAATGCTTTTACTATaGATCCTTCCTCCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVNSNPNHKVSLLSSHATKMLLL*ILPPSC Trigger: GCAGCTGGGAGGAAGGATTCATAGTAAAAGCATTTT...CGTGGCATGGGAGGAGAGGAGGGAGACTTTGTGGTTAGGGTTACTGTTTACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114410.10 |
||
| CDS-3UTR TCA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCGGTTTGCTGTAGCCTaGGAGGAGATCTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWRFAVA*EEIWAA Trigger: TGCTGCCCAGATCTCCTCTCAGGCTACAGCAAACCG...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGGAGTAACACTGAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCTTCTGCTTCATGGCCTaGCATTGCTCCCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DCRSNTEDSNTTVKRGDFFCFMA*HCSLRC Trigger: GCATCGAAGGGAGCAATGGCAGGCCATGAAGCAGAA...GAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTCAGTGTTACTCCTACAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACTTCCTGGTCTCCATCTaGACACCCAAACTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NCTETTSGKCKVNSNPNHFLVSI*TPKLLE Trigger: TTCCAGCAGTTTGGGTGTGCAGATGGAGACCAGGAA...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | AAGCATCAAAGGCATCCATCATTTTCTTCAACTCGGCTACTGAGTAATAGCTCCACGTCTTCTGCTTCATaGCCTGCCATTGCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHQRHPSFSSTRLLSNSSTSSAS*PAIAPF Trigger: GAAGGGAGCAATGGCAGGCCATGAAGCAGAAGACGT...GGAGCTATTACTCAGTAGCCGAGTTGAAGAAAATGATGGATGCCTTTGATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCGCACACCCAAACTGCTaGAAGCTTCTAGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTTVKRGDFLLLGCLGIAHPNC*KLLERV Trigger: CACCCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGC...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCAGTTAACTATTTAAATAAACTTCATCCTCTTCCCTaGGGGCTATCAGCCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GETSYCLVALVSVNYLNKLHPLP*GLSAAS Trigger: AGAGGCGGCTGATAGCCCTCAGGGAAGAGGATGAAG...TTTATTTAAATAGTTAACTGATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTACCACTAAACATAGATaGCAGCATAGAATCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRTTKHR*QHRILK Trigger: TTTAAGGATTCTATGCTGGCATCTATGTTTAGTGGT...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCTCTGCACACCCAAACTaGTGGAAGCTTCTAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTTVKRGDFLLLGCLGISAHPN*WKLLER Trigger: CCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGA...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGTTATCTTTGGAAAAGAAACAACTAGGAGCAGCTGGTGGGGTCACACTTTCTGCACACCCAAACTaGTGGAAGCTTCTAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMLSLEKKQLGAAGGVTLSAHPN*WKLLER Trigger: CCTCTCTAGAAGCTTCCAGCAGTTTGGGTGTGCAGA...AAGTGTGACCCCACCAGCTGCTCCTAGTTGTTTCTTTTCCAAAGATAACATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTCGAATTGGGGCCATATGACGCAGGCTTCCGTGTAAAGGCCGTTCTTCCAACCACTAAACATAGATaGCAGCATAGAATCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFELGPYDAGFRVKAVLPTTKHR*QHRILK Trigger: TTTAAGGATTCTATGCTGGCATCTATGTTTAGTGGT...TGGAAGAACGGCCTTTACACGGAAGCCTGCGTCATATGGCCCCAATTCGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGAACGTCTTCTGCTTCATaGCCTGCCATTGCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRTSSAS*PAIAPF Trigger: GAAGGGAGCAATGGCAGGCCATGAAGCAGAAGACGT...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCTGGAAAATAAAATGGCCCAATCACATGAGATCGCCATCTAAGCTTTCAGCCCAAAAATCTGACTaGCTTAGGACCAGTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PTWKIKWPNHMRSPSKLSAQKSD*LRTSLT Trigger: TGTAAGACTGGTCCTAAGCCAGTCAGATTTTTGGGC...TGAAAGCTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGAGTAACACTGAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCCTTCAACTCGGCTACTaGGTAATAGCTCCAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: DCRSNTEDSNTTVKRGDFLQLGY*VIAPNV Trigger: TACATTTGGAGCTATTACTCAGTAGCCGAGTTGAAG...GAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTCAGTGTTACTCCTACAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114410.10 |
||
| CDS-3UTR TCA 90 bp | AACTGCACAGAGACCACCTCAGGAAAATGCAAAGTAAACAGTAACCCTAACCACAGTCCAAAATGTATTTaGATAGATGTCCATCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: NCTETTSGKCKVNSNPNHSPKCI*IDVHHG Trigger: ACCGTGATGGACATCTATTCAAATACATTTTGGACT...GTGGTTAGGGTTACTGTTTACTTTGCATTTTCCTGAGGTGGTCTCTGTGCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGATCTACTCTCACAGCTTaGACCAGATGTGTTAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRSTLTA*TRCVKI Trigger: TATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGA...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114410.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGAACCACTAAACATAGATaGCAGCATAGAATCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRTTKHR*QHRILK Trigger: TTTAAGGATTCTATGCTGGCATCTATGTTTAGTGGT...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGGGGTCACACTTGAGACCTCTTCTGCTGGCTGCCACACTGTGGCCAGCAGAGATCTGGGCAGCATaGGCAGGTGACACCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LVGSHLRPLLLAATLWPAEIWAA*AGDTLT Trigger: AGTGAGGGTGTCACCTGCCAATGCTGCCCAGATCTC...TGCTGGCCACAGTGTGGCAGCCAGCAGAAGAGGTCTCAAGTGTGACCCCACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS GCA 90 bp | CCATCTCATTGGCCAAGTGGTCAGACAAGCTGTACGGGTAAGGGATaGCAAAGTAGTCAGCCTCCTCCTGCAGGGCAGCTCGCGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSHWPSGQTSCTGKG*QSSQPPPAGQLASA Trigger: AGCAGACGCGAGCTGCCCTGCAGGAGGAGGCTGACTACTTTGGCATCCCTTACCCGTACAGCTTGTCTGACCACTTGGCCAATGAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTAAACAGTAACCCTAACCACAAAGTCTCCCTCCTCTCCTCCCATGCCACGGCCGCCTCTTTCGAATaGGGGCCATATGACGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KVNSNPNHKVSLLSSHATAASFE*GPYDAG Trigger: GCCTGCGTCATATGGCCCCAATTCGAAAGAGGCGGC...CGTGGCATGGGAGGAGAGGAGGGAGACTTTGTGGTTAGGGTTACTGTTTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTACCACATGCATTCCCCCTTGTGGAGTCCTCCTCAGCTaGATCACTCGAGGGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FNCSKNRPRAPTTCIPPCGVLLS*ITRGGG Trigger: TCCACCCCCTCGAGTGATCAAGCTGAGGAGGACTCC...ACAAGGGGGAATGCATGTGGTAGGAGCTCTAGGACGGTTTTTGGAACAGTTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCCATGCCACGGCATCCACTTTTCCTGTCGTAATCCTCAACATCCACGTTATGTCTCCATCTCATaGGCCAAGTGGTCAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPCHGIHFSCRNPQHPRYVSIS*AKWSDK Trigger: CTTGTCTGACCACTTGGCCAATGAGATGGAGACATA...ACGTGGATGTTGAGGATTACGACAGGAAAAGTGGATGCCGTGGCATGGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 ENSMUST00000163061.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGAGTCCTCCTCAGCTaGATCACTCGAGGGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EDSNTTVKRGDFLLLGCLGVLLS*ITRGGG Trigger: TCCACCCCCTCGAGTGATCAAGCTGAGGAGGACTCC...AAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGAGAGATCTGGGCAGCATaGGCAGGTGACACCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TEQSKEPTWKIKWPNHMREIWAA*AGDTLT Trigger: AGTGAGGGTGTCACCTGCCAATGCTGCCCAGATCTC...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGAAGGTGGGTGTGTGGCTaGGTTTTCAGAGCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TEQSKEPTWKIKWPNHMRRWVCG*VFRALG Trigger: GCCCAGAGCTCTGAAAACCAAGCCACACACCCACCT...TCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCAGTTAACTATTTAAATAAAAGGTGGGTGTGTGGCTaGGTTTTCAGAGCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GETSYCLVALVSVNYLNKRWVCG*VFRALG Trigger: GCCCAGAGCTCTGAAAACCAAGCCACACACCCACCT...TTTATTTAAATAGTTAACTGATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | TCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTGGTATCTATGTCTCCATCTCATaGGCCAAGTGGTCAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNTTVKRGDFLLLGCLGIYVSIS*AKWSDK Trigger: CTTGTCTGACCACTTGGCCAATGAGATGGAGACATA...GATACCAAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTACCACATGCATTCCCCCTTGTGTTCTTGACTTTAATTaGGGTACTTGTAGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FNCSKNRPRAPTTCIPPCVLDFN*GTCRRA Trigger: GGCCCTTCTACAAGTACCCAAATTAAAGTCAAGAAC...ACAAGGGGGAATGCATGTGGTAGGAGCTCTAGGACGGTTTTTGGAACAGTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | AAGACACAGCTGCTAACAGAACAAAGTAAAGAGCCAACCTGGAAAATAAAATGGTATGTCTCCATCTCATaGGCCAAGTGGTCAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTQLLTEQSKEPTWKIKWYVSIS*AKWSDK Trigger: CTTGTCTGACCACTTGGCCAATGAGATGGAGACATA...CCATTTTATTTTCCAGGTTGGCTCTTTACTTTGTTCTGTTAGCAGCTGTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000161608.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCCAACCTGGAAAATAAAATGGCCCAATCACATGAGATCGCCATCTAAGGGAGAACCCAAACTGTaGGTTTATTGCAAACTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEPTWKIKWPNHMRSPSKGEPKL*VYCKLS Trigger: GCTTAGTTTGCAATAAACCAACAGTTTGGGTTCTCC...CTTAGATGGCGATCTCATGTGATTGGGCCATTTTATTTTCCAGGTTGGCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114410.10 |
||
| CDS-3UTR CAA 90 bp | GACTGTAGGAGTAACACTGAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCGTTCTTGACTTTAATTaGGGTACTTGTAGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DCRSNTEDSNTTVKRGDFVLDFN*GTCRRA Trigger: GGCCCTTCTACAAGTACCCAAATTAAAGTCAAGAAC...GAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTCAGTGTTACTCCTACAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACTCTAACACTACTGTAAAAAGGGGAGACTTCTTACTGCTTGGTTGCCTTACTGAAGCAGAGTTCTaGACTTTAATTTGGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: EDSNTTVKRGDFLLLGCLTEAEF*TLIWVL Trigger: AAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGT...AAGGCAACCAAGCAGTAAGAAGTCTCCCCTTTTTACAGTAGTGTTAGAGTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAAGTAAACTCCCATATTTTAACTGTTCCAAAAACCGTCCTAGAGCTCCTACTGAAGCAGAGTTCTaGACTTTAATTTGGGTACTT | + |
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Preference number: 5 (lower is better) Translates to: HQSKLPYFNCSKNRPRAPTEAEF*TLIWVL Trigger: AAGTACCCAAATTAAAGTCAAGAACTCTGCTTCAGT...AGGAGCTCTAGGACGGTTTTTGGAACAGTTAAAATATGGGAGTTTACTTTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114410.10 ENSMUST00000164963.8 |
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| CDS CCA 72 bp | CTATATTTGACCTTAAAGAATATGTCTCCATCTCATTaGCCAAGTGGTCAGACAAGCTGTACGGGTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LYLTLKNMSPSH*PSGQTSCTGKG Trigger: TCCCTTACCCGTACAGCTTGTCTGACCACTTGGCCAATGAGATGGAGACATATTCTTTAAGGTCAAATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114410.10 |
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