Pregenerated sensors for KCTD17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033287Ensembl transcript IDs: ENSMUST00000089414.11, ENSMUST00000089414.12, ENSMUST00000159771.8, ENSMUST00000162321.8, ENSMUST00000162517.9, ENSMUST00000162808.2, ENSMUST00000166142.10, ENSMUST00000166142.11, ENSMUST00000229290.2, ENSMUST00000229622.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTaGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGCTCCAGCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: IWGLTSGCLWLVIAW*PAPAVPGGSCSSRE Trigger: CTCCCTGCTGGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR CCA 90 bp | GTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTaGTGGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGCTCCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VIWGLTSGCLWLVIA*WPAPAVPGGSCSSR Trigger: CCTGCTGGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR CCA 90 bp | CCCAAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTaGCTTGTAATAGCCTGGTGGCCCGCCCCCGCAGTTCCCGGCGGC | + |
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Preference number: 1 (lower is better) Translates to: PKSLEVIWGLTSGCL*LVIAWWPAPAVPGG Trigger: GCCGCCGGGAACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR CCA 90 bp | CATGGCGGGTGGGACACAACTGACAGACATGTGCCCATCCCGGGGTaGTCAAGACACGGGCGGGACAGCTCAACCCGTTACACCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: HGGWDTTDRHVPIPG*SRHGRDSSTRYTCP Trigger: GGGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATGTCTGTCAGTTGTGTCCCACCCGCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR GCA 90 bp | ACCTGTCCCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCTGCTaGCAAACACACGGTGGCACAGAGAAGTGGTGGCCAAGGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TCPLPHPKSLDTVLC*QTHGGTEKWWPRCC Trigger: ACAGCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR GCA 90 bp | TACACCTGTCCCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCTaGTGCCAAACACACGGTGGCACAGAGAAGTGGTGGCCAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: YTCPLPHPKSLDTVL*CQTHGGTEKWWPRC Trigger: GCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAGGTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR CCA 90 bp | ACAGCTCAACCCGTTACACCTGTCCCCTTCCCCATCCCAAGTCCCTaGACACTGTACTCTGCTGCCAAACACACGGTGGCACAGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: TAQPVTPVPFPIPSP*TLYSAAKHTVAQRS Trigger: ACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAGGTGTAACGGGTTGAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR CCA 90 bp | GGCAGCCAGGCCAAGCCTGTTTGTTCAGCTTTATTTCATGGCGGGTaGGACACAACTGACAGACATGTGCCCATCCCGGGGTGGTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GSQAKPVCSALFHGG*DTTDRHVPIPGWSR Trigger: TCTTGACCACCCCGGGATGGGCACATGTCTGTCAGTTGTGTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGCCTGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGTGGCCTTGGCGTCTCTaGCTGGAGACCCCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: PGDPRTHVRPSKVPEGPRWPWRL*LETPGP Trigger: GGGTCCTGGGGTCTCCAGGCAGAGACGCCAAGGCCA...CCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCACTGACAAGGTAGAGGGCTTGTCTTCCTCCTCGGGCCAGGGGCCCACCGCCCCAAGGCAGGAGTaGGTCTCAGCCCGGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: GSTDKVEGLSSSSGQGPTAPRQE*VSARQM Trigger: CATCTGCCGGGCTGAGACTCACTCCTGCCTTGGGGC...GGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR-3UTR TCA 90 bp | GAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGCCTGCCAAGTCCCTGGAGGTaGTCTGGGGGCTCACATCCG | + |
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Preference number: 2 (lower is better) Translates to: ETPGPMSGLPRSQRAPGLPSPWR*SGGSHP Trigger: CGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGG...CAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGTGGCCTTGGCGTCTCTaGCTGGAGACCCCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: GVYPPCSKGAQVRGQKGLWPWRL*LETPGP Trigger: GGGTCCTGGGGTCTCCAGGCAGAGACGCCAAGGCCA...CAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR-3UTR GCA 90 bp | TCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGGAAGATATTGGCCTTGGCGTCTCTaGCTGGAGACCCCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SAMQQGRPGEGTKGPGRYWPWRL*LETPGP Trigger: GGGTCCTGGGGTCTCCAGGCAGAGACGCCAAGGCCA...ATATCTTCCAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGCCTGGGCCCAGGGCCTGGAAGATATaGGTAGGTAGTGCCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: PRTHVRPSKVPEGPRPGPRAWKI*VGSATV Trigger: AACTGTGGCACTACCTACCCATATCTTCCAGGCCCT...GGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR-3UTR CCA 90 bp | GAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGCCTGGGGGACAAAAGGGCCTaGAAGATATGGGTAGGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ETPGPMSGLPRSQRAPGLGDKRA*KIWVGS Trigger: ACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCC...CAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCTGCTGCCAAACACACGGTGCTTGGCGTCTCTGCCTaGAGACCCCAGGACCCATGT | + |
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Preference number: 2 (lower is better) Translates to: PFPIPSPWTLYSAAKHTVLGVSA*RPQDPC Trigger: ACATGGGTCCTGGGGTCTCCAGGCAGAGACGCCAAG...CACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCACATCCGGGTGCCTCTaGCTTGTAATAGCAGGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: VPGGDLGAHIRVPLACNSTSGCL*LVIAGA Trigger: CGCCCCTGCTATTACAAGCCAGAGGCACCCGGATGT...GCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166142.10 ENSMUST00000229622.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGAGGCTCTAAGAGGTGCTATGATGGGACTGGGAGGGAGTGTATCCGCCGGTAGTGCCACAGTTTaGCCTTGGCGTCTCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ETEALRGAMMGLGGSVSAGSATV*PWRLCL Trigger: CAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACC...GGCGGATACACTCCCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089414.11 ENSMUST00000166142.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTCAAGACACGGGCGGGACAGCTCAACCCGTTACACCTGTCCCCTTCCCCAACTTCCTTCCTGCCTaGCAAAGTCCTCACATTGTC | + |
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Preference number: 2 (lower is better) Translates to: GGQDTGGTAQPVTPVPFPNFLPA*QSPHIV Trigger: GACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTT...GGGGAAGGGGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCTGCTGCCAAACACACGGTGCCCCATGATCCTCCCTaGTTCTCACAACAACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PFPIPSPWTLYSAAKHTVPHDPP*FSQQPC Trigger: ACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGGG...CACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCTGCTGCCAAACACACTCCCAGGAACCCCATaGTCCTCCCTGATTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: LSPSPSQVPGHCTLLPNTLPGTP*SSLILT Trigger: TGTGAGAATCAGGGAGGATCATGGGGTTCCTGGGAG...TGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGGAAGATATAGGGCCTGGAAGATATaGGTAGGTAGTGCCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SAMQQGRPGEGTKGPGRYRAWKI*VGSATV Trigger: AACTGTGGCACTACCTACCCATATCTTCCAGGCCCT...ATATCTTCCAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR CCA 72 bp | GGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTaGTGGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLTSGCLWLVIA*WPAPAVPGGSC Trigger: GCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR CCA 72 bp | CTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTaGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LTSGCLWLVIAW*PAPAVPGGSCS Trigger: GGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR GCA 72 bp | AAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTaGCTCTGGCTTGTAATAGCCTGGTGGCCCGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: KSLEVIWGLTSG*LWLVIAWWPAP Trigger: GGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR CCA 72 bp | CTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTaGCTTGTAATAGCCTGGTGGCCCGCCCCCGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: LEVIWGLTSGCL*LVIAWWPAPAV Trigger: AACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGGACAAGGTAGAGGGCTaGTCTTCCTCCTCGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GVYPPCSKGAQVRGQKGLDKVEG*SSSSGQ Trigger: CTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTC...CAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR GCA 72 bp | AAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTaGCTCTGGCTTGTAATAGCAGGGGCGGCAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: KSLEVIWGLTSG*LWLVIAGAAAL Trigger: CAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166142.10 ENSMUST00000229622.2 |
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| 3UTR GCA 72 bp | TGGGTAGGTAGTGCCACAGTTTGGCCTTGGCGTCTCTaGCTGGAGACCCCAGGACCCATGTCAGGCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: WVGSATVWPWRL*LETPGPMSGLP Trigger: TGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACCTACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR CCA 72 bp | AGGGCCTGGAAGATATGGGTAGGTAGTGCCACAGTTTaGCCTTGGCGTCTCTGCCTGGAGACCCCAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: RAWKIWVGSATV*PWRLCLETPGP Trigger: GGGTCCTGGGGTCTCCAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACCTACCCATATCTTCCAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089414.11 ENSMUST00000159771.8 ENSMUST00000166142.10 |
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| 3UTR GCA 72 bp | CCCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCTaGTGCCAAACACACGGTGGCACAGAGAAGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: PLPHPKSLDTVL*CQTHGGTEKWW Trigger: CCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR CCA 72 bp | CCCGTTACACCTGTCCCCTTCCCCATCCCAAGTCCCTaGACACTGTACTCTGCTGCCAAACACACGGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: PVTPVPFPIPSP*TLYSAAKHTVA Trigger: TGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAGGTGTAACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR-3UTR CAA 90 bp | TCAACCCGTTACACCTGTCCCCTTCCCCATCCCAAGTCCCTGGACACTGTACTCGACAAGGTAGAGGGCTaGTCTTCCTCCTCGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: STRYTCPLPHPKSLDTVLDKVEG*SSSSGQ Trigger: CTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTC...GAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAGGTGTAACGGGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR TCA 72 bp | AAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTaGTCTGGGGGCTCACATCCGGGTGCCTCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: KGFQIGTPSPWR*SGGSHPGASGL Trigger: CAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162321.8 ENSMUST00000166142.10 ENSMUST00000229622.2 |
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| 3UTR GCA 72 bp | CTTCCCCATCCCAAGTCCCTGGACACTGTACTCTGCTaGCAAACACACGGTGGCACAGAGAAGTGGTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LPHPKSLDTVLC*QTHGGTEKWWP Trigger: TGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR CCA 72 bp | GTCCCTGGACACTGTACTCTGCTGCCAAACACACGGTaGCACAGAGAAGTGGTGGCCAAGGTGCTGTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: VPGHCTLLPNTR*HREVVAKVLLS Trigger: GCTTAACAGCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR TCA 72 bp | TGGGAGGAGAGGATGACCCTATGGTGCCATAGAGACTaGGGCTCTAAGAGGTGCTATGATGGGACTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: WEERMTLWCHRD*GSKRCYDGTGR Trigger: CCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTCTATGGCACCATAGGGTCATCCTCTCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089414.11 ENSMUST00000166142.10 |
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| 3UTR CCA 72 bp | GCCAAGCCTGTTTGTTCAGCTTTATTTCATGGCGGGTaGGACACAACTGACAGACATGTGCCCATCCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: AKPVCSALFHGG*DTTDRHVPIPG Trigger: CCCCGGGATGGGCACATGTCTGTCAGTTGTGTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| 3UTR TCA 72 bp | TCACAACAACCCTGTGAGGTAGGTGGGAGGAGAGGATaGCCCTATGGTGCCATAGAGACTGAGGCTCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: SQQPCEVGGRRG*PYGAIETEALR Trigger: TCTTAGAGCCTCAGTCTCTATGGCACCATAGGGTCATCCTCTCCTCCCACCTACCTCACAGGGTTGTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166142.10 |
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| CDS-3UTR TCA 90 bp | TGGTGGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGCTCCAGCAGGGAGAGGGCGCCTGACACAGGCGGCTaGGGAAGGACTTCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WWPAPAVPGGSCSSRERAPDTGG*GRTSAP Trigger: GGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGG...CGCCCTCTCCCTGCTGGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCACCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGCTCCAGCAGGGAGAGGGCGGCTCGTCCGTGCTCTTaGCCTTGCGAGTGGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: WWPAPAVPGGSCSSRERAARPCS*PCEWTR Trigger: CCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGC...CGCCCTCTCCCTGCTGGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCACCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| CDS-3UTR TCA 90 bp | TGGCCCGCCCCCGCAGTTCCCGGCGGCAGCTGCTCCAGCAGGGAGAGGGCGGGATGGGGTCACGGTCAATaGGGTAGGCCCCGGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: WPAPAVPGGSCSSRERAGWGHGQ*GRPRSH Trigger: ATGAGACCGGGGCCTACCTCATTGACCGTGACCCCA...TCCCGCCCTCTCCCTGCTGGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGCCTGGGCCCGGAGCTCAGGCCGTGTaGGGAGCTGTGGAGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PRTHVRPSKVPEGPRPGPGAQAV*GAVELL Trigger: AAGGAGCTCCACAGCTCCCCACACGGCCTGAGCTCC...GGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
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| 3UTR CAA 72 bp | CCGGCAGATGCAGGCAGCACTGACAAGGTAGAGGGCTaGTCTTCCTCCTCGGGCCAGGGGCCCACCCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: PADAGSTDKVEG*SSSSGQGPTPW Trigger: CCACGGGGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159771.8 ENSMUST00000162321.8 ENSMUST00000166142.10 |
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| CDS-3UTR CCA 90 bp | GGCAGCACTGACAAGGTAGAGGGCTTGTCTTCCTCCTCGGGCCAGGGGCCCACCACAGCGTCTGGCGGGTaGTCAGGAACACCGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GSTDKVEGLSSSSGQGPTTASGG*SGTPCP Trigger: GGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGT...GGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
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| CDS-3UTR CCA 90 bp | CCTGGAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGTCCCGACACAGCGTCTaGCGGGTGGTCAGGAACACC | + |
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Preference number: 4 (lower is better) Translates to: PGDPRTHVRPSKVPEGPRSRHSV*RVVRNT Trigger: GGTGTTCCTGACCACCCGCCAGACGCTGTGTCGGGA...CCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
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| CDS-3UTR CCA 90 bp | GGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTGGCCCGCCCCCGCAGGAGCTCAGGCCGTGTaGGGAGCTGTGGAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLTSGCLWLVIAWWPAPAGAQAV*GAVELL Trigger: AAGGAGCTCCACAGCTCCCCACACGGCCTGAGCTCC...TGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGTGGGGTCACGGTCAATaGGGTAGGCCCCGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDPRTHVRPSKVPEGPRWGHGQ*GRPRSH Trigger: ATGAGACCGGGGCCTACCTCATTGACCGTGACCCCA...CCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACATCCGGGTGCCTCTGGCTTGTAATAGCAGGGGCGGCAGCTCTGGGGGCGCTCGTCCGTGCTCTTaGCCTTGCGAGTGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AHIRVPLACNSRGGSSGGARPCS*PCEWTR Trigger: CCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGC...GCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGGCACCCGGATGTGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229622.2 |
||
| CDS-3UTR CCA 90 bp | GCTCACATCCGGGTGCCTCTGGCTTGTAATAGCAGGGGCGGCAGCTCTGGGGGCCTGCAAGCTCAGGCTTaGGTCTGGGAGGGTGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHIRVPLACNSRGGSSGGLQAQA*VWEGAD Trigger: GTCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAG...GCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGGCACCCGGATGTGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229622.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGCCTGACACAGGCGGCTaGGGAAGGACTTCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVYPPCSKGAQVRGQKGLPDTGG*GRTSAP Trigger: GGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGG...CAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTGGAGCTCAGGCCGTGTaGGGAGCTGTGGAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQVPGGDLGAHIRVPLACGAQAV*GAVELL Trigger: AAGGAGCTCCACAGCTCCCCACACGGCCTGAGCTCC...ACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162321.8 ENSMUST00000229622.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGGATGGTCAGGAACACCGTaGCCCCCACGTTCAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSAMQQGRPGEGTKGPGWSGTP*PPRSAA Trigger: TGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCA...TCCAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTGGCCCGCCCCCGCTCCTCCTCTTGGCACTaGAGCACTCGGTATACATGC | + |
|
Preference number: 4 (lower is better) Translates to: GAHIRVPLACNSLVARPRSSSWH*STRYTC Trigger: GCATGTATACCGAGTGCTGCAGTGCCAAGAGGAGGA...GCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTACTCTTGGGGGCGGGCTaGACCTTTCTCCTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PKSLEVIWGLTSGCLWLVLLGAG*TFLLGI Trigger: GATGCCCAGGAGAAAGGTGCAGCCCGCCCCCAAGAG...TACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCTGAGGAAGGACTTCTaGTCCCGACACAGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSVSAMQQGRPGEGTKGLRKDF*SRHSVW Trigger: CCAGACGCTGTGTCGGGAGCAGAAGTCCTTCCTCAG...CCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGGCCTGGGAATGTTGTAGAACTCTaGTTCCTCCAGGACCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPRTHVRPSKVPEGPRPGNVVEL*FLQDPL Trigger: GAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATT...CCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCAGACATCCGGGTGCCTCTaGCTTGTAATAGCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWRPQDPCQAFQGPRGPQTSGCL*LVIAWP Trigger: AGGCCAAGCTATTACAAGCCAGAGGCACCCGGATGT...CTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGGAGACCCCAGGACCCATGTCAGGCCTTCCAAGGTCCCAGAGGGCCCCATCCTCCTCTTGGCACTaGAGCACTCGGTATACATGC | + |
|
Preference number: 4 (lower is better) Translates to: CLETPGPMSGLPRSQRAPSSSWH*STRYTC Trigger: GCATGTATACCGAGTGCTGCAGTGCCAAGAGGAGGA...TGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCTCAGGCTTGGGTCTaGGAGGGTGCGGACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSLEVIWGLTSGCLWLVIAQAWV*EGADRD Trigger: GTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAGC...TATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229622.2 |
||
| CDS-3UTR GCA 90 bp | CTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTGGCCCGCCCCCGCAGTTAATGTTGTAGAACTCTaGTTCCTCCAGGACCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSGCLWLVIAWWPAPAVNVVEL*FLQDPL Trigger: GAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATT...AACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTGTATACATGCTTAGGTaGCACCTGGGCCACTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAMQQGRPGEGTKGPVYMLR*HLGHCV Trigger: TACACAGTGGCCCAGGTGCCACCTAAGCATGTATAC...AGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAAATGTTGTAGAACTCTaGTTCCTCCAGGACCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKSLEVIWGLTSGCLWLVNVVEL*FLQDPL Trigger: GAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATT...TACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000162321.8 ENSMUST00000229622.2 |
||
| CDS-3UTR GCA 90 bp | ACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTGGCCCGCCCCCGCAGTTCCCAGCACCAATTTTCCATaGCTGAGGAAATTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TSGCLWLVIAWWPAPAVPSTNFP*LRKFRM Trigger: CATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCT...GGGAACTGCGGGGGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCGTATACATGCTTAGGTaGCACCTGGGCCACTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLEVIWGLTSGCLWLVIAVYMLR*HLGHCV Trigger: TACACAGTGGCCCAGGTGCCACCTAAGCATGTATAC...GGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGTATCCGCCATGCAGCAAGGGCGCCCAGGTGAGGGGACAAAAGGGCCTAGCACCAATTTTCCATaGCTGAGGAAATTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAMQQGRPGEGTKGPSTNFP*LRKFRM Trigger: CATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCT...AGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159771.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAGCACCAATTTTCCATaGCTGAGGAAATTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQVPGGDLGAHIRVPLACSTNFP*LRKFRM Trigger: CATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCT...ACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000162321.8 ENSMUST00000229622.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAAAAATAAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTGATCTGGGAGCTCAGGCCGTGTaGGGAGCTGTGGAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTKIKDFRSEPQVPGGDLGAQAV*GAVELL Trigger: AAGGAGCTCCACAGCTCCCCACACGGCCTGAGCTCC...CAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000159771.8 ENSMUST00000162321.8 ENSMUST00000229290.2 ENSMUST00000229622.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGTACAAAAATAAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTGATTCCTCCTCTTGGCACTaGAGCACTCGGTATACATGC | + |
|
Preference number: 4 (lower is better) Translates to: RGTKIKDFRSEPQVPGGDSSSWH*STRYTC Trigger: GCATGTATACCGAGTGCTGCAGTGCCAAGAGGAGGA...ATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000159771.8 ENSMUST00000162321.8 ENSMUST00000229290.2 ENSMUST00000229622.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAAAAATAAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTGATCTGACATCCGGGTGCCTCTaGCTTGTAATAGCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTKIKDFRSEPQVPGGDLTSGCL*LVIAWP Trigger: AGGCCAAGCTATTACAAGCCAGAGGCACCCGGATGT...CAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159771.8 ENSMUST00000229290.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGTACAAAAATAAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTGATAATGTTGTAGAACTCTaGTTCCTCCAGGACCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGTKIKDFRSEPQVPGGDNVVEL*FLQDPL Trigger: GAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATT...ATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000159771.8 ENSMUST00000162321.8 ENSMUST00000229290.2 ENSMUST00000229622.2 |
||
| CDS-3UTR CCA 90 bp | CGTGGTACAAAAATAAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTGATGTATACATGCTTAGGTaGCACCTGGGCCACTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGTKIKDFRSEPQVPGGDVYMLR*HLGHCV Trigger: TACACAGTGGCCCAGGTGCCACCTAAGCATGTATAC...ATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000159771.8 ENSMUST00000162321.8 ENSMUST00000229290.2 ENSMUST00000229622.2 |
||
| CDS CCA 90 bp | TGCGGACAGGGACCTTTCTCCTGGGCATCCGCCTCCACCTGCACCTaGGCCACCTCCACCTCCTCCACCTCCTGCCGCCGCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CGQGPFSWASASTCT*ATSTSSTSCRRCSS Trigger: GGAGGAGCAGCGGCGGCAGGAGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGGTCCCTGTCCGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162808.2 |
||
| CDS CCA 90 bp | TGGCTTGTAATAGCTTTCTCCTGGGCATCCGCCTCCACCTGCACCTaGGCCACCTCCACCTCCTCCACCTCCTGCCGCCGCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLVIAFSWASASTCT*ATSTSSTSCRRCSS Trigger: GGAGGAGCAGCGGCGGCAGGAGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGCTATTACAAGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089414.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTAATAGCCTGGTGGCCCGCCTTAGCAATCGTCCTCTaGGGGGCGGGCTGCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IWGLTSGCLWLVIAWWPALAIVL*GAGCTF Trigger: AAAGGTGCAGCCCGCCCCCAAGAGGACGATTGCTAA...GGCGGGCCACCAGGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162321.8 |
||
| CDS TCA 90 bp | TCTCATCCCTGTCCGATTGAAGCTCTTCGCCCTGACACAGGCGGCTaGGGAAGGACTTCTGCTCCCGACACAGCGTCTGGCGGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHPCPIEALRPDTGG*GRTSAPDTASGGWS Trigger: TGACCACCCGCCAGACGCTGTGTCGGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000159771.8 ENSMUST00000162517.9 ENSMUST00000166142.11 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTGGCTTGTTCCTCGGCCATGTCCTaGTCCAGCACCAATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQVPGGDLGAHIRVPLACSSAMS*SSTNFP Trigger: TGGAAAATTGGTGCTGGACAAGGACATGGCCGAGGA...ACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000162321.8 ENSMUST00000229622.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGGGCTTGTCTTCCTCCTCGGGCCAGGGGCCCACCCCGTGGTACAAAAATCCTCGGCCATGTCCTaGTCCAGCACCAATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGLVFLLGPGAHPVVQKSSAMS*SSTNFP Trigger: TGGAAAATTGGTGCTGGACAAGGACATGGCCGAGGA...TTTTTGTACCACGGGGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000159771.8 ENSMUST00000162321.8 ENSMUST00000229622.2 |
||
| CDS-3UTR CAA 90 bp | GGTACAAAAATAAAGGATTTCAGATCGGAACCCCAAGTCCCTGGAGGTGATCTGACTGCAAGCTCAGGCTaGGGTCTGGGAGGGTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTKIKDFRSEPQVPGGDLTASSG*GLGGCG Trigger: TCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAGT...CAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229622.2 |
||
| CDS GCA 72 bp | GCTCTGGGGGCGGGCGCGGGGCCGAGGAGCTCTCACTaGAAGCTCAGGCTTGGGTCTGGGAGGGTGCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALGAGAGPRSSH*KLRLGSGRVRT Trigger: TGTCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAGTGAGAGCTCCTCGGCCCCGCGCCCGCCCCCAGAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162808.2 |
||
| CDS CAA 90 bp | TCCTGCCGCCGCTGCTCCTCCAGCTGCTCGTCCGTGCTCTTGGCCTaGCGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAGCTGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCRRCSSSCSSVLLA*RVDSELRPCGELWS Trigger: GCTCCACAGCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGGCAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000162321.8 ENSMUST00000162808.2 ENSMUST00000229622.2 |
||
| CDS CCA 72 bp | GCCGCCGCTGCTCCTCCAGCTGCTCGTCCGTGCTCTTaGCCTTGCGAGTGGACTCGGAGCTCAGGCCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAPPAARPCS*PCEWTRSSGRV Trigger: CACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGGC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000162321.8 ENSMUST00000162808.2 ENSMUST00000229622.2 |
||
| CDS GCA 72 bp | GCTGCTCCTCCAGCTGCTCGTCCGTGCTCTTGGCCTTaGGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAPPAARPCSWP*EWTRSSGRVGS Trigger: GCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000162321.8 ENSMUST00000162808.2 ENSMUST00000229622.2 |
||
| CDS GCA 72 bp | TTGGGTCTGGGAGGGTGCGGACAGGGACCTTGGCCTTaGGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGLGGCGQGPWP*EWTRSSGRVGS Trigger: GCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGGTCCCTGTCCGCACCCTCCCAGACCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.11 |
||
| CDS CCA 72 bp | CTGGGAGGGTGCGGACAGGGACCTTGGCCTTGCGAGTaGACTCGGAGCTCAGGCCGTGTGGGGAGCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGGCGQGPWPCE*TRSSGRVGSCG Trigger: TCCACAGCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGGTCCCTGTCCGCACCCTCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.11 |
||
| CDS CAA 72 bp | CGCTGCTCCTCCAGCTGCTCGTCCGTGCTCTTGGCCTaGCGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCSSSCSSVLLA*RVDSELRPCGE Trigger: CTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000162321.8 ENSMUST00000162808.2 ENSMUST00000229622.2 |
||
| CDS CAA 72 bp | TGCCGCCGCTGCTCCTCCAGCTGCTCGTCCGTGCTCTaGGCCTTGCGAGTGGACTCGGAGCTCAGGCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CRRCSSSCSSVL*ALRVDSELRPC Trigger: ACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGGCA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000162321.8 ENSMUST00000162808.2 ENSMUST00000229622.2 |
||
| CDS CAA 72 bp | CTTGGGTCTGGGAGGGTGCGGACAGGGACCTTGGCCTaGCGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGSGRVRTGTLA*RVDSELRPCGE Trigger: CTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGGTCCCTGTCCGCACCCTCCCAGACCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.11 |
||
| CDS CAA 90 bp | AAGCTCAGGCTTGGGTCTGGGAGGGTGCGGACAGGGACCTTGGCCTaGCGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAGCTGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLRLGSGRVRTGTLA*RVDSELRPCGELWS Trigger: GCTCCACAGCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.11 |
||
| CDS CAA 90 bp | CACTGCAAGCTCAGGCTTGGGTCTGGGAGGGTGCGGACAGGGACCTaGGCCTTGCGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HCKLRLGSGRVRTGT*ALRVDSELRPCGEL Trigger: CAGCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166142.11 |
||
| CDS CAA 72 bp | CTCAGGCTTGGGTCTGGGAGGGTGCGGACAGGGACCTaGGCCTTGCGAGTGGACTCGGAGCTCAGGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: LRLGSGRVRTGT*ALRVDSELRPC Trigger: ACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166142.11 |
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| CDS TCA 72 bp | GGCGGTGGTGGGAGGGAGAAAAGGTTAGCGGGATCCTaGGATGACAGGGCTTGGCCTTGCGAGTGGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: GGGGREKRLAGS*DDRAWPCEWTR Trigger: CCGAGTCCACTCGCAAGGCCAAGCCCTGTCATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCACCACCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162517.9 |
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| CDS GCA 72 bp | ACATCCGGGTGCCTCTGGCTTGTAATAGCTTGGCCTTaGGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TSGCLWLVIAWP*EWTRSSGRVGS Trigger: GCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGCTATTACAAGCCAGAGGCACCCGGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159771.8 ENSMUST00000229290.2 |
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| CDS CCA 72 bp | GGGTGCCTCTGGCTTGTAATAGCTTGGCCTTGCGAGTaGACTCGGAGCTCAGGCCGTGTGGGGAGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GCLWLVIAWPCE*TRSSGRVGSCG Trigger: TCCACAGCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGCTATTACAAGCCAGAGGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159771.8 ENSMUST00000229290.2 |
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| CDS CAA 72 bp | CACATCCGGGTGCCTCTGGCTTGTAATAGCTTGGCCTaGCGAGTGGACTCGGAGCTCAGGCCGTGTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: HIRVPLACNSLA*RVDSELRPCGE Trigger: CTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGCTATTACAAGCCAGAGGCACCCGGATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159771.8 ENSMUST00000229290.2 |
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| CDS TCA 72 bp | TGTCCGATTGAAGCTCTTCGCCCTGACACAGGCGGCTaGGGAAGGACTTCTGCTCCCGACACAGCGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CPIEALRPDTGG*GRTSAPDTASG Trigger: GCCAGACGCTGTGTCGGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089414.12 ENSMUST00000159771.8 ENSMUST00000162517.9 ENSMUST00000166142.11 |
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| CDS CCA 72 bp | CTGGAGGTGATCTGGGGGCTCACATCCGGGTGCCTCTaGCTTGTAATAGCTTTCTCCTGGGCATCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LEVIWGLTSGCL*LVIAFSWASAS Trigger: GGAGGCGGATGCCCAGGAGAAAGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089414.12 |
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| CDS TCA 72 bp | TGGTGGGAGGGAGAAAAGGTTAGCGGGATCCTGAGATaGCAGGGCTTGGCCTTGCGAGTGGACTCGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: WWEGEKVSGILR*QGLALRVDSEL Trigger: GAGCTCCGAGTCCACTCGCAAGGCCAAGCCCTGTCATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162517.9 |
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| CDS GCA 72 bp | AAGTCCCTGGAGGTGATCTGGGGGCTCACATCCGGGTaGCTCTGGCTTGTAATAGCTTTCTCCTGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: KSLEVIWGLTSG*LWLVIAFSWAS Trigger: GGATGCCCAGGAGAAAGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089414.12 |
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