Pregenerated sensors for KCTD16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051401Ensembl transcript IDs: ENSMUST00000091927.5, ENSMUST00000096572.2, ENSMUST00000235241.2, ENSMUST00000236889.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTGGATGTTGCTCTaGCGCGTTACAGGCCCACAGATCACCGTCTCCTGCGGAGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TGPFLMGRSRVWMLL*RVTGPQITVSCGEL Trigger: CAGCTCTCCGCAGGAGACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CCA 90 bp | TGGATCAGCTGCACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTaGATGTTGCTCTGGCGCGTTACAGGCCCACAGATCACCGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: WISCTGPFLMGRSRV*MLLWRVTGPQITVS Trigger: GGAGACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 90 bp | CTCTCTCCTTTGTCTCCCTTGCCATTCTTGCAGCAGCAGTCACAATaGGAGGAGGACCACCGGGAAGGCTCACCTCCCATCCCAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: LSPLSPLPFLQQQSQ*EEDHREGSPPIPAT Trigger: TGTGGCTGGGATGGGAGGTGAGCCTTCCCGGTGGTCCTCCTCTCATTGTGACTGCTGCTGCAAGAATGGCAAGGGAGACAAAGGAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR GCA 90 bp | TGGACAGGTCATTGCAGGAGGTGCCGCTCTCTCCTTTGTCTCCCTTaGCATTCTTGCAGCAGCAGTCACAATGAGAGGAGGACCACCGGG | + |
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Preference number: 1 (lower is better) Translates to: WTGHCRRCRSLLCLP*HSCSSSHNERRTTG Trigger: CCCGGTGGTCCTCCTCTCATTGTGACTGCTGCTGCAAGAATGGCAAGGGAGACAAAGGAGAGAGCGGCACCTCCTGCAATGACCTGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 90 bp | TCCGCCTCATCTCTGACTGTTGGATCAGCTGCACCGGACCTTTCTTaGTGGGCCGATCCAGAGTCTGGATGTTGCTCTGGCGCGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: SASSLTVGSAAPDLS*WADPESGCCSGALQ Trigger: CTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CCA 90 bp | GTCAGAGTCCGGAGCAGGTCACTTTTCCGCCTCATCTCTGACTGTTaGATCAGCTGCACCGGACCTTTCTTGATGGGCCGATCCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: VRVRSRSLFRLISDC*ISCTGPFLMGRSRV Trigger: GACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAAAGTGACCTGCTCCGGACTCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR GCA 90 bp | CGGAGCAGGTCACTTTTCCGCCTCATCTCTGACTGTTGGATCAGCTaGACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTGGATGTTG | + |
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Preference number: 1 (lower is better) Translates to: RSRSLFRLISDCWIS*TGPFLMGRSRVWML Trigger: CAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAAAGTGACCTGCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR GCA 90 bp | GCTCTTCCTCGATGGAGAGCTTTTCCTTCGCAGCTTTCTTTTTGCTaGTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: ALPRWRAFPSQLSFC*LCSTPWSLTSESGA Trigger: TGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGAAGGAAAAGCTCTCCATCGAGGAAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 90 bp | AGCAGGACAGAGAAAGCAGTGAGTCTCTGCGCTTACCTTAGCGAGTaGGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SRTEKAVSLCAYLSE*VLETQFLRRNNLFQ Trigger: CTGGAAAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAGCGCAGAGACTCACTGCTTTCTCTGTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR GCA 90 bp | GTCTCTGCGCTTACCTTAGCGAGTGAGTGCTGGAGACTCAGTTCTTaGGAAGAAATAACCTTTTCCAGAGCAATCAGAAACCACAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: VSALTLASECWRLSS*EEITFSRAIRNHSH Trigger: GTGGCTGTGGTTTCTGATTGCTCTGGAAAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAGCGCAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR CCA 90 bp | TTGGGATCAATGATTCCCAAAGCCTGTGAGCTACTCACACGTAGCTaGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LGSMIPKACELLTRS*FLLYLKILSTWDQV Trigger: TACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTAGCTCACAGGCTTTGGGAATCATTGATCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| 3UTR TCA 90 bp | GGACGTCTTGTCAAATCCCAAACAGGTAAAGGACAGAGGTATCGATaGAAAGTGTCAAGAGATTGGTGCTCTCGGAAAACAATGATTCCA | + |
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Preference number: 1 (lower is better) Translates to: GRLVKSQTGKGQRYR*KVSRDWCSRKTMIP Trigger: TGGAATCATTGTTTTCCGAGAGCACCAATCTCTTGACACTTTTCATCGATACCTCTGTCCTTTACCTGTTTGGGATTTGACAAGACGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR CCA 90 bp | CTCACACGTAGCTGGTTCTTGTTGTATCTTAAGATTCTCAGCACATaGGACCAAGTAAATAAAAGACAAAGGACAACTAAGAGCTCGTTT | + |
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Preference number: 1 (lower is better) Translates to: LTRSWFLLYLKILST*DQVNKRQRTTKSSF Trigger: AAACGAGCTCTTAGTTGTCCTTTGTCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| 3UTR CAA 90 bp | AGCTGCACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTGGATGTaGCTCTGGCGCGTTACAGGCCCACAGATCACCGTCTCCTGCGGA | + |
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Preference number: 2 (lower is better) Translates to: SCTGPFLMGRSRVWM*LWRVTGPQITVSCG Trigger: TCCGCAGGAGACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTTTCCGCCTCATCTCTGACTCTCCTGCGGAGAGCTaGCCTCTGACTGGCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LEPDVRVRSRSLFRLISDSPAES*PLTGCH Trigger: GTGACAGCCAGTCAGAGGCCAGCTCTCCGCAGGAGA...GTCAGAGATGAGGCGGAAAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTTTCCGCTGTCACAGCTGGAAGTaGACAGGTCATTGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: MFDSLEPDVRVRSRSLFRCHSWK*TGHCRR Trigger: CCTCCTGCAATGACCTGTCCACTTCCAGCTGTGACA...GCGGAAAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CAA 90 bp | TTCCGCCTCATCTCTGACTGTTGGATCAGCTGCACCGGACCTTTCTaGATGGGCCGATCCAGAGTCTGGATGTTGCTCTGGCGCGTTACA | + |
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Preference number: 2 (lower is better) Translates to: FRLISDCWISCTGPF*MGRSRVWMLLWRVT Trigger: TGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCTGGATGTTGCTCTGGCGCGTTACAGGCCCACAGATCACCGTCTCCTGCCTCCTTTGTCTCCCTTaGCATTCTTGCAGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RVWMLLWRVTGPQITVSCLLCLP*HSCSSS Trigger: ACTGCTGCTGCAAGAATGGCAAGGGAGACAAAGGAG...GCAGGAGACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTGGATGTTGCTCTGGACTGGCTGTCACAGCTaGAAGTGGACAGGTCATTGC | + |
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Preference number: 2 (lower is better) Translates to: SCTGPFLMGRSRVWMLLWTGCHS*KWTGHC Trigger: GCAATGACCTGTCCACTTCCAGCTGTGACAGCCAGT...CCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CAA 90 bp | TCCAGCTCTTCCTCGATGGAGAGCTTTTCCTTCGCAGCTTTCTTTTaGCTGCTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SSSSSMESFSFAAFF*LLMFDSLEPDVRVR Trigger: CCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGAAGGAAAAGCTCTCCATCGAGGAAGAGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTTCTCCCTTGCCATTCTTaGAGCAGCAGTCACAATGAG | + |
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Preference number: 2 (lower is better) Translates to: CLCSTPWSLTSESGAGHFLPCHS*SSSHNE Trigger: CTCATTGTGACTGCTGCTGCAAGAATGGCAAGGGAG...AAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CAA 90 bp | TCCAGAGCAATCAGAAACCACAGCCACACACTGAGCCTGGACGTCTaGTCAAATCCCAAACAGGTAAAGGACAGAGGTATCGATGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SRAIRNHSHTLSLDV*SNPKQVKDRGIDEK Trigger: CTTTTCATCGATACCTCTGTCCTTTACCTGTTTGGGATTTGACAAGACGTCCAGGCTCAGTGTGTGGCTGTGGTTTCTGATTGCTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR-3UTR TCA 90 bp | GCGAGTGAGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTTCCAGAGCAGGACAGAGGTATCGATaGAAAGTGTCAAGAGATTGG | + |
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Preference number: 2 (lower is better) Translates to: ASECWRLSSCEEITFSRAGQRYR*KVSRDW Trigger: CCAATCTCTTGACACTTTTCATCGATACCTCTGTCC...TGCTCTGGAAAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCACACGTAGCTGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCCATCAATGGACATTGTaGTCTAACAAATGTGGACCG | + |
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Preference number: 2 (lower is better) Translates to: YSHVAGSCCILRFSAHGTHQWTL*SNKCGP Trigger: CGGTCCACATTTGTTAGATCACAATGTCCATTGATG...GGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTTCCAGAGCAATCGTGTCAAGAGATTGGTaGTCTCGGAAAACAATGATT | + |
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Preference number: 2 (lower is better) Translates to: SECWRLSSCEEITFSRAIVSRDW*SRKTMI Trigger: AATCATTGTTTTCCGAGAGCACCAATCTCTTGACAC...GATTGCTCTGGAAAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR CAA 90 bp | ATGATTCCCAAAGCCTGTGAGCTACTCACACGTAGCTGGTTCTTGTaGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: MIPKACELLTRSWFL*YLKILSTWDQVNKR Trigger: TCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTAGCTCACAGGCTTTGGGAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| 3UTR CAA 90 bp | TCAATGATTCCCAAAGCCTGTGAGCTACTCACACGTAGCTGGTTCTaGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: SMIPKACELLTRSWF*LYLKILSTWDQVNK Trigger: TTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTAGCTCACAGGCTTTGGGAATCATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTTTCCGCCTCATCTCTGACTGAAGTGGACAGGTCATaGCAGGAGGTGCCGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: WSLTSESGAGHFSASSLTEVDRS*QEVPLS Trigger: AGAGAGCGGCACCTCCTGCAATGACCTGTCCACTTC...AGTCAGAGATGAGGCGGAAAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CCA 72 bp | TTCTTGATGGGCCGATCCAGAGTCTGGATGTTGCTCTaGCGCGTTACAGGCCCACAGATCACCGTCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: FLMGRSRVWMLL*RVTGPQITVSC Trigger: GCAGGAGACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CCA 72 bp | TGCACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTaGATGTTGCTCTGGCGCGTTACAGGCCCACAGATC | + |
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Preference number: 3 (lower is better) Translates to: CTGPFLMGRSRV*MLLWRVTGPQI Trigger: GATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 72 bp | TTGTCTCCCTTGCCATTCTTGCAGCAGCAGTCACAATaGGAGGAGGACCACCGGGAAGGCTCACCTCCCATC | + |
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Preference number: 3 (lower is better) Translates to: LSPLPFLQQQSQ*EEDHREGSPPI Trigger: GATGGGAGGTGAGCCTTCCCGGTGGTCCTCCTCTCATTGTGACTGCTGCTGCAAGAATGGCAAGGGAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CCA 72 bp | CGGAGCAGGTCACTTTTCCGCCTCATCTCTGACTGTTaGATCAGCTGCACCGGACCTTTCTTGATGGGCCGA | + |
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Preference number: 3 (lower is better) Translates to: RSRSLFRLISDC*ISCTGPFLMGR Trigger: TCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAAAGTGACCTGCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 72 bp | TCTCTGACTGTTGGATCAGCTGCACCGGACCTTTCTTaGTGGGCCGATCCAGAGTCTGGATGTTGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SLTVGSAAPDLS*WADPESGCCSG Trigger: GCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 72 bp | CAGAGTCCGGAGCAGGTCACTTTTCCGCCTCATCTCTaGCTGTTGGATCAGCTGCACCGGACCTTTCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: QSPEQVTFPPHL*LLDQLHRTFLD Trigger: ATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAAAGTGACCTGCTCCGGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR GCA 72 bp | TCACTTTTCCGCCTCATCTCTGACTGTTGGATCAGCTaGACCGGACCTTTCTTGATGGGCCGATCCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: SLFRLISDCWIS*TGPFLMGRSRV Trigger: GACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR CCA 72 bp | TCGCAGCTTTCTTTTTGCTGCTTATGTTCGACTCCCTaGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: SQLSFCCLCSTP*SLTSESGAGHF Trigger: AAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR GCA 72 bp | CGATGGAGAGCTTTTCCTTCGCAGCTTTCTTTTTGCTaGTTATGTTCGACTCCCTGGAGCCTGACGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RWRAFPSQLSFC*LCSTPWSLTSE Trigger: CTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGAAGGAAAAGCTCTCCATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| 3UTR TCA 72 bp | GAGAAAGCAGTGAGTCTCTGCGCTTACCTTAGCGAGTaGGTGCTGGAGACTCAGTTCTTGCGAAGAAATAAC | + |
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Preference number: 3 (lower is better) Translates to: EKAVSLCAYLSE*VLETQFLRRNN Trigger: GTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAGCGCAGAGACTCACTGCTTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR-3UTR CAA 90 bp | CTTACCTTAGCGAGTGAGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTCTGAGCCTGGACGTCTaGTCAAATCCCAAACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: LTLASECWRLSSCEEITFLSLDV*SNPKQV Trigger: TACCTGTTTGGGATTTGACAAGACGTCCAGGCTCAG...AAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR TCA 72 bp | GTCAAATCCCAAACAGGTAAAGGACAGAGGTATCGATaGAAAGTGTCAAGAGATTGGTGCTCTCGGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: VKSQTGKGQRYR*KVSRDWCSRKT Trigger: TGTTTTCCGAGAGCACCAATCTCTTGACACTTTTCATCGATACCTCTGTCCTTTACCTGTTTGGGATTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| 3UTR CCA 72 bp | AGCTGGTTCTTGTTGTATCTTAAGATTCTCAGCACATaGGACCAAGTAAATAAAAGACAAAGGACAACTAAG | + |
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Preference number: 3 (lower is better) Translates to: SWFLLYLKILST*DQVNKRQRTTK Trigger: CTTAGTTGTCCTTTGTCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS-3UTR GCA 90 bp | GTCACAATGAGAGGAGGACCACCGGGAAGGCTCACCTCCCATCCCAGCCACATGCCGGAACTTGGCATCTaGTTGCCCCTCTCTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: VTMRGGPPGRLTSHPSHMPELGI*LPLSAQ Trigger: TTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTCCGG...CATGTGGCTGGGATGGGAGGTGAGCCTTCCCGGTGGTCCTCCTCTCATTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| CDS-3UTR GCA 90 bp | GATCCAGAGTCTGGATGTTGCTCTGGCGCGTTACAGGCCCACAGATCACCGTCTCTGCTTGCCCCTCTCTaGCCAAGGTACAGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: DPESGCCSGALQAHRSPSLLAPL*PRYRIP Trigger: GGGGATCCTGTACCTTGGGCAGAGAGGGGCAAGCAG...AGACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| CDS-3UTR TCA 90 bp | ATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCGACTCCCTGGAGCCTaGCGTCAGAGTCCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: MSSFGEVYFKVATTHSPPRLPGA*RQSPEQ Trigger: CTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCG...GGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| 3UTR CAA 72 bp | GGACCTTTCTTGATGGGCCGATCCAGAGTCTGGATGTaGCTCTGGCGCGTTACAGGCCCACAGATCACCGTC | + |
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Preference number: 4 (lower is better) Translates to: GPFLMGRSRVWM*LWRVTGPQITV Trigger: GACGGTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| CDS-3UTR TCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCGACTCCCTGGAGCCTaGCGTCAGAGTCCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSRLPGA*RQSPEQ Trigger: CTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCG...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR GCA 90 bp | AGCCACCGGGTTATATCTCCTTCAACTGTCCATTCTTGGTCAAGGGGAGGAGGCCTGCTTGCCCCTCTCTaGCCAAGGTACAGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SHRVISPSTVHSWSRGGGLLAPL*PRYRIP Trigger: GGGGATCCTGTACCTTGGGCAGAGAGGGGCAAGCAG...GCCTCCTCCCCTTGACCAAGAATGGACAGTTGAAGGAGATATAACCCGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS-3UTR CCA 90 bp | TGCTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTTGGACTCTCCGGAACTTaGCATCTGCTTGCCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLCSTPWSLTSESGAGHFGLSGT*HLLAPL Trigger: GAGAGGGGCAAGCAGATGCCAAGTTCCGGAGAGTCC...AAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCAGGAGGTGTATCTTTCTaGAGCTCGGTCGGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLMFDSLEPDVRVRSRSGGVSF*SSVGVS Trigger: AGAGACCCCGACCGAGCTCCAGAAAGATACACCTCC...TGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACCACAGCCACACACTGAGCCTGGACGTCTTGTCAAATCCCAAACAGGTAAAGGCGAGAGATGCCTaGGGGGCTTGGGCTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNHSHTLSLDVLSNPKQVKARDA*GAWAPK Trigger: CTTCGGAGCCCAAGCCCCGCAGGCATCTCTCGCCTT...TACCTGTTTGGGATTTGACAAGACGTCCAGGCTCAGTGTGTGGCTGTGGTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCGATCCAGAGTCTGGATGTTGCTCTGGCGCGTTACAGGCCCACAGATCACTTACAGGCCACCATGTaGAATCCACACTCTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPIQSLDVALARYRPTDHLQATM*NPHSDN Trigger: GTTGTCAGAGTGTGGATTCCACATGGTGGCCTGTAA...GTGATCTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCGTCTGGATGTTGCTCTaGCGCGTTACAGGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPLGRFISKWRLPTALPVWMLL*RVTGPQ Trigger: CTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGAC...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| 3UTR CAA 72 bp | GTGGACAGGTCATTGCAGGAGGTGCCGCTCTCTCCTTaGTCTCCCTTGCCATTCTTGCAGCAGCAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VDRSLQEVPLSP*SPLPFLQQQSQ Trigger: TTGTGACTGCTGCTGCAAGAATGGCAAGGGAGACAAAGGAGAGAGCGGCACCTCCTGCAATGACCTGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR TCA 90 bp | AGCCACCGGGTTATATCTCCTTCAACTGTCCATTCTTGGTCAAGGGGAGGAGGCCCTCTTTCTGGAAAGTaGTCAGGCAGGACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHRVISPSTVHSWSRGGGPLSGK*SGRTTC Trigger: GCAGGTGGTCCTGCCTGATCACTTTCCAGAAAGAGG...GCCTCCTCCCCTTGACCAAGAATGGACAGTTGAAGGAGATATAACCCGGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGCCTCATCTCTGACTGTTGGATCAGCTGCACCGGACCTTTCTTGATGGGCAACTTGGCATCTGCTTaGCCCTCTCTGCCCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FRLISDCWISCTGPFLMGNLASA*PSLPKV Trigger: TACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTT...GCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR GCA 90 bp | AGCCACCGGGTTATATCTCCTTCAACTGTCCATTCTTGGTCAAGGGGAGGAGGCAAGTGGACAGGTCATTaGAGGAGGTGCCGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHRVISPSTVHSWSRGGGKWTGH*RRCRSL Trigger: GAGAGAGCGGCACCTCCTGCAATGACCTGTCCACTT...GCCTCCTCCCCTTGACCAAGAATGGACAGTTGAAGGAGATATAACCCGGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCCAGAGTCTGGATGTTaGTCTGGCGCGTTACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSSFGEVYFKVATTHSPPPESGC*SGALQA Trigger: GGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGG...GGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCGGACTCTCCGGAACTTaGCATCTGCTTGCCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSFGEVYFKVATTHSPPGLSGT*HLLAPL Trigger: GAGAGGGGCAAGCAGATGCCAAGTTCCGGAGAGTCC...GGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCTCTCCTGCGGAGAGCTaGCCTCTGACTGGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSSPAES*PLTGCH Trigger: GTGACAGCCAGTCAGAGGCCAGCTCTCCGCAGGAGA...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| 3UTR CAA 72 bp | ATCTCTGACTGTTGGATCAGCTGCACCGGACCTTTCTaGATGGGCCGATCCAGAGTCTGGATGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISDCWISCTGPF*MGRSRVWMLLW Trigger: CCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTCAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCAACTTGGCATCTGCTTaGCCCTCTCTGCCCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLPLGRFISKWRLPTALPNLASA*PSLPKV Trigger: TACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTT...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCTGTCACAGCTGGAAGTaGACAGGTCATTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPLGRFISKWRLPTALPCHSWK*TGHCRR Trigger: CCTCCTGCAATGACCTGTCCACTTCCAGCTGTGACA...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | CTTACCTTAGCGAGTGAGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTAGCAGCCACCCCACCTaGAGGCAAGGGCAAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLASECWRLSSCEEITFSSHPT*RQGQRD Trigger: GTCCCTTTGCCCTTGCCTGCAGGTGGGGTGGCTGCT...AAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS-3UTR GCA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTAACTCATCCGGGCTTTaGTTGACATCCTCGGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMSSFGEVYFKVATTHSPNSSGL*LTSSGA Trigger: GGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTT...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTGCTTGCCCCTCTCTaGCCAAGGTACAGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTALLAPL*PRYRIP Trigger: GGGGATCCTGTACCTTGGGCAGAGAGGGGCAAGCAG...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCGGAACTTGGCATCTaGTTGCCCCTCTCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALPELGI*LPLSAQ Trigger: TTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTCCGG...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | AGCCACCGGGTTATATCTCCTTCAACTGTCCATTCTTGGTCAAGGGGAGGAGGCCTCCCTTGCCATTCTTaGAGCAGCAGTCACAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHRVISPSTVHSWSRGGGLPCHS*SSSHNE Trigger: CTCATTGTGACTGCTGCTGCAAGAATGGCAAGGGAG...GCCTCCTCCCCTTGACCAAGAATGGACAGTTGAAGGAGATATAACCCGGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCAAGTGGACAGGTCATTaGAGGAGGTGCCGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSKWTGH*RRCRSL Trigger: GAGAGAGCGGCACCTCCTGCAATGACCTGTCCACTT...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | CTTACCTTAGCGAGTGAGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTCATGTCCCCGCCAGGTaGGAAGGAAAAGCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLASECWRLSSCEEITFHVPAR*EGKAAG Trigger: CCCGGCTGCTTTTCCTTCCCACCTGGCGGGGACATG...AAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS-3UTR CCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCTTCAGGGAAGGAGTTaGGAACAGCAGCCCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPLQGRS*EQQPPG Trigger: ACCAGGGGGCTGCTGTTCCCAACTCCTTCCCTGAAG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCGTCTGGATGTTGCTCTaGCGCGTTACAGGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPVWMLL*RVTGPQ Trigger: CTGTGGGCCTGTAACGCGCCAGAGCAACATCCAGAC...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR TCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCCTCTTTCTGGAAAGTaGTCAGGCAGGACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPPLSGK*SGRTTC Trigger: GCAGGTGGTCCTGCCTGATCACTTTCCAGAAAGAGG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGATGGGCCGATCCAGAGTCTGGATGTTGCTCTGGCGCGTTACAGGCCCAGTGGAATCCACACTCTaGCAACATATCAAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLMGRSRVWMLLWRVTGPVESTL*QHIKSS Trigger: AGAGCTTTTGATATGTTGTCAGAGTGTGGATTCCAC...TGGGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR GCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCAACTCATCCGGGCTTTaGTTGACATCCTCGGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTANSSGL*LTSSGA Trigger: GGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTT...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR GCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCAACTTGGCATCTGCTTaGCCCTCTCTGCCCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSNLASA*PSLPKV Trigger: TACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTT...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCGGAACTTGGCATCTaGTTGCCCCTCTCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTAPELGI*LPLSAQ Trigger: TTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTCCGG...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCGACTGTTGGATCAGCTaGACCGGACCTTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSSFGEVYFKVATTHSPPDCWIS*TGPFLM Trigger: CATCAAGAAAGGTCCGGTGCAGCTGATCCAACAGTC...GGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCTCGTGTCGCTTCCTTaGGAGGCATCTTCGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSLVSLP*EASSKS Trigger: TGACTTCGAAGATGCCTCCCAAGGAAGCGACACGAG...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTGGAGGTGTATCTTTCTaGAGCTCGGTCGGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMSSFGEVYFKVATTHSPGGVSF*SSVGVS Trigger: AGAGACCCCGACCGAGCTCCAGAAAGATACACCTCC...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCTTACAGGCCACCATGTaGAATCCACACTCTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPLGRFISKWRLPTALPLQATM*NPHSDN Trigger: GTTGTCAGAGTGTGGATTCCACATGGTGGCCTGTAA...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| 3UTR CAA 72 bp | TCCTCGATGGAGAGCTTTTCCTTCGCAGCTTTCTTTTaGCTGCTTATGTTCGACTCCCTGGAGCCTGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSMESFSFAAFF*LLMFDSLEPDV Trigger: GACGTCAGGCTCCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGAAGGAAAAGCTCTCCATCGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR TCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCATGTGGAATGGCGAGTaGAGTAAACCTGGCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALMWNGE*SKPGRQ Trigger: TTGGCGGCCAGGTTTACTTCACTCGCCATTCCACAT...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTGGTTTGGGATCAATGATTCCCAAAGCCTGTGAGCTACTCACACGTAGCATGTGGAATGGCGAGTaGAGTAAACCTGGCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPGLGSMIPKACELLTRSMWNGE*SKPGRQ Trigger: TTGGCGGCCAGGTTTACTTCACTCGCCATTCCACAT...GCTACGTGTGAGTAGCTCACAGGCTTTGGGAATCATTGATCCCAAACCAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCACCTGCCTGTCCCTaGGATAGTCCAGAATATAAC | + |
|
Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSPPACP*DSPEYN Trigger: GTTATATTCTGGACTATCTCAGGGACAGGCAGGTGG...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTTTCCGCCTCATCTCTaGCTGTTGGATCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPFPPHL*LLDQLH Trigger: GTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAA...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCTCCCTTGCCATTCTTaGAGCAGCAGTCACAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSLPCHS*SSSHNE Trigger: CTCATTGTGACTGCTGCTGCAAGAATGGCAAGGGAG...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCTCGTGTCGCTTCCTTaGGAGGCATCTTCGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALLVSLP*EASSKS Trigger: TGACTTCGAAGATGCCTCCCAAGGAAGCGACACGAG...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCGGAGGTGTATCTTTCTaGAGCTCGGTCGGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTAGGVSF*SSVGVS Trigger: AGAGACCCCGACCGAGCTCCAGAAAGATACACCTCC...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTGTCACAGCTGGAAGTaGACAGGTCATTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPCHSWK*TGHCRR Trigger: CCTCCTGCAATGACCTGTCCACTTCCAGCTGTGACA...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTACTGGCTGTCACAGCTaGAAGTGGACAGGTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HMSSFGEVYFKVATTHSPTGCHS*KWTGHC Trigger: GCAATGACCTGTCCACTTCCAGCTGTGACAGCCAGT...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTGGTTTGGGATCAATGATTCCCAAAGCCTGTGAGCTACTCACACGTAGCACTGGCTGTCACAGCTaGAAGTGGACAGGTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGLGSMIPKACELLTRSTGCHS*KWTGHC Trigger: GCAATGACCTGTCCACTTCCAGCTGTGACAGCCAGT...GCTACGTGTGAGTAGCTCACAGGCTTTGGGAATCATTGATCCCAAACCAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTAAGAGCTCGTTTCTGGTTCCACATCTAGAAAGAAATCTACCCTGTGGATCTCCTGCGGAGAGCTaGCCTCTGACTGGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTKSSFLVPHLERNLPCGSPAES*PLTGCH Trigger: GTGACAGCCAGTCAGAGGCCAGCTCTCCGCAGGAGA...TCCACAGGGTAGATTTCTTTCTAGATGTGGAACCAGAAACGAGCTCTTAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCCAGCTCTTCCTCGATaGAGAGCTTTTCCTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPPALPR*RAFPSQ Trigger: CTGCGAAGGAAAAGCTCTCCATCGAGGAAGAGCTGG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCAGCTCTTCCTCGATaGAGAGCTTTTCCTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALPALPR*RAFPSQ Trigger: CTGCGAAGGAAAAGCTCTCCATCGAGGAAGAGCTGG...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | CGAAGAAATAACCTTTTCCAGAGCAATCAGAAACCACAGCCACACACTGAGCCTCAGGAGCAGTTCGGATaGTGTTGTGTGAGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRNNLFQSNQKPQPHTEPQEQFG*CCVSSA Trigger: TGCACTGCTCACACAACAGCATCCGAACTGCTCCTG...AGGCTCAGTGTGTGGCTGTGGTTTCTGATTGCTCTGGAAAAGGTTATTTCTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTTTCCAAAGACTTCTTTTaGCAAGGAAATTCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLCSTPWSLTSESGAGHFSKDFF*QGNSSA Trigger: TGCGGAAGAATTTCCTTGGCAAAAGAAGTCTTTGGA...AAAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCTCCTTTGTCTCCCTTaGCATTCTTGCAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALLLCLP*HSCSSS Trigger: ACTGCTGCTGCAAGAATGGCAAGGGAGACAAAGGAG...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATGATTCCACACTTAAGCTCTAGTAGGTGTACGTTTCTATGTGTGTATGAATGGGATGCCTGCGGGGCTTaGGCTCCGAAGCTGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MIPHLSSSRCTFLCVYEWDACGA*APKLRG Trigger: ACCTCTCAGCTTCGGAGCCCAAGCCCCGCAGGCATC...CCATTCATACACACATAGAAACGTACACCTACTAGAGCTTAAGTGTGGAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS-3UTR CCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCACGAGGTCAGGGAGCTaGAAGTACTCAGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPTRSGS*KYSASL Trigger: AAGAGAAGCTGAGTACTTCCAGCTCCCTGACCTCGT...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCATCTCTGACTGTTaGATCAGCTGCACCGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTALISDC*ISCTGP Trigger: AGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAG...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCAACATTCAGCTCTATaGCTTCAGGGAAGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPQHSAL*LQGRSW Trigger: CCAACTCCTTCCCTGAAGTCATAGAGCTGAATGTTG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCTTTGTCTCCCTTaGCATTCTTGCAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTALLCLP*HSCSSS Trigger: ACTGCTGCTGCAAGAATGGCAAGGGAGACAAAGGAG...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AGCACATGGGACCAAGTAAATAAAAGACAAAGGACAACTAAGAGCTCGTTTCTGCTTCAGGGAAGGAGTTaGGAACAGCAGCCCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STWDQVNKRQRTTKSSFLLQGRS*EQQPPG Trigger: ACCAGGGGGCTGCTGTTCCCAACTCCTTCCCTGAAG...CAGAAACGAGCTCTTAGTTGTCCTTTGTCTTTTATTTACTTGGTCCCATGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCTTACAGGCCACCATGTaGAATCCACACTCTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALLQATM*NPHSDN Trigger: GTTGTCAGAGTGTGGATTCCACATGGTGGCCTGTAA...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCGGAGAGAATGGGGGATaGTTATTAATGTGGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALGENGG*LLMWNG Trigger: GCCATTCCACATTAATAAGCATCCCCCATTCTCTCC...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCTCCAAAGACTTCTTTTaGCAAGGAAATTCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSFGEVYFKVATTHSPPSKDFF*QGNSSA Trigger: TGCGGAAGAATTTCCTTGGCAAAAGAAGTCTTTGGA...GGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCAGCTTTCTTTTTGCTaGTTATGTTCGACTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPQLSFC*LCSTPW Trigger: CCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | AAACCTGGTTTGGGATCAATGATTCCCAAAGCCTGTGAGCTACTCACACGTAGCCAGCTTTCTTTTTGCTaGTTATGTTCGACTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPGLGSMIPKACELLTRSQLSFC*LCSTPW Trigger: CCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTG...GCTACGTGTGAGTAGCTCACAGGCTTTGGGAATCATTGATCCCAAACCAGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTTCGCAGCTTTCTTTTTaGTGCTTATGTTCGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HMSSFGEVYFKVATTHSPSQLSF*CLCSTP Trigger: GGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGA...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCAGCAGTGTCTCTCTTTaGGGAGAACATTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALSSVSL*GEHFPQ Trigger: CTGTGGAAAATGTTCTCCCCAAAGAGAGACACTGCT...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| 3UTR CAA 72 bp | CCCAAAGCCTGTGAGCTACTCACACGTAGCTGGTTCTaGTTGTATCTTAAGATTCTCAGCACATGGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKACELLTRSWF*LYLKILSTWDQ Trigger: TTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTAGCTCACAGGCTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTGTGGAATCCACACTCTaGCAACATATCAAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMSSFGEVYFKVATTHSPVESTL*QHIKSS Trigger: AGAGCTTTTGATATGTTGTCAGAGTGTGGATTCCAC...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCTCCAAAGACTTCTTTTaGCAAGGAAATTCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALSKDFF*QGNSSA Trigger: TGCGGAAGAATTTCCTTGGCAAAAGAAGTCTTTGGA...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAAAGACCAGAGTCTGGATGTTaGTCTGGCGCGTTACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLYLKILSTWDQVNKRPESGC*SGALQA Trigger: GGCCTGTAACGCGCCAGAGCAACATCCAGACTCTGG...TCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AGCACATGGGACCAAGTAAATAAAAGACAAAGGACAACTAAGAGCTCGTTTCTGACGAGGTCAGGGAGCTaGAAGTACTCAGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STWDQVNKRQRTTKSSFLTRSGS*KYSASL Trigger: AAGAGAAGCTGAGTACTTCCAGCTCCCTGACCTCGT...CAGAAACGAGCTCTTAGTTGTCCTTTGTCTTTTATTTACTTGGTCCCATGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| 3UTR CAA 72 bp | AAAGCCTGTGAGCTACTCACACGTAGCTGGTTCTTGTaGTATCTTAAGATTCTCAGCACATGGGACCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KACELLTRSWFL*YLKILSTWDQV Trigger: TACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTAGCTCACAGGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | TACTCACACGTAGCTGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCGTGGAATCCACACTCTaGCAACATATCAAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSHVAGSCCILRFSAHGTVESTL*QHIKSS Trigger: AGAGCTTTTGATATGTTGTCAGAGTGTGGATTCCAC...GGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCATCTTCAAGAAATCCTaGATACATTTCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLGRFISKWRLPTALIFKKS*IHFSSS Trigger: AGAGCTGGAGAAATGTATCCAGGATTTCTTGAAGAT...GAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCTCAGGGAAGCGATCTaGAATTTTTATCTTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPLREAI*NFYLQE Trigger: TTCTTGAAGATAAAAATTCCAGATCGCTTCCCTGAG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAAAGATTTCCGCCTCATCTCTaGCTGTTGGATCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLYLKILSTWDQVNKRFPPHL*LLDQLH Trigger: GTGCAGCTGATCCAACAGTCAGAGATGAGGCGGAAA...TCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | TCAAATCCCAAACAGGTAAAGGACAGAGGTATCGATGAAAAGTGTCAAGAGATTTGCACCTGGAAGAGTTaGAAGAGGTACCTGGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SNPKQVKDRGIDEKCQEICTWKS*KRYLDL Trigger: TAAGTCCAGGTACCTCTTGCAACTCTTCCAGGTGCA...AATCTCTTGACACTTTTCATCGATACCTCTGTCCTTTACCTGTTTGGGATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAAAGACTCATCTCTGACTGTTaGATCAGCTGCACCGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: WFLLYLKILSTWDQVNKRLISDC*ISCTGP Trigger: AGGTCCGGTGCAGCTGATCCAACAGTCAGAGATGAG...TCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AACATAAGCCACCGGGTTATATCTCCTTCAACTGTCCATTCTTGGTCAAGGGGAATCTTCAAGAAATCCTaGATACATTTCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NISHRVISPSTVHSWSRGIFKKS*IHFSSS Trigger: AGAGCTGGAGAAATGTATCCAGGATTTCTTGAAGAT...TCCCCTTGACCAAGAATGGACAGTTGAAGGAGATATAACCCGGTGGCTTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CCA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCAGGGAAGCGATCTaGAATTTTTATCTTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NICLPLGRFISKWRLPTALREAI*NFYLQE Trigger: TTCTTGAAGATAAAAATTCCAGATCGCTTCCCTGAG...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAAAGACAACATTCAGCTCTATaGCTTCAGGGAAGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WFLLYLKILSTWDQVNKRQHSAL*LQGRSW Trigger: CCAACTCCTTCCCTGAAGTCATAGAGCTGAATGTTG...TCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCAAGTAAATAAAAGATCGCAGCTTTCTTTTTaGTGCTTATGTTCGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLYLKILSTWDQVNKRSQLSF*CLCSTP Trigger: GGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGA...TCTTTTATTTACTTGGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS TCA 90 bp | CAGCCGGGAAGGCGAGAGATGCCTGCGGGGCTTGGGCTCCGAAGCTaGGAGGTCCCACGGTGCCAGGAGCAGTTCGGATGCTGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPGRREMPAGLGLRS*EVPRCQEQFGCCCV Trigger: CACACAACAGCATCCGAACTGCTCCTGGCACCGTGGGACCTCTCAGCTTCGGAGCCCAAGCCCCGCAGGCATCTCTCGCCTTCCCGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS CCA 90 bp | TGGGAAGGAAAAGCAGCCGGGAAGGCGAGAGATGCCTGCGGGGCTTaGGCTCCGAAGCTGAGAGGTCCCACGGTGCCAGGAGCAGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WEGKAAGKARDACGA*APKLRGPTVPGAVR Trigger: CCGAACTGCTCCTGGCACCGTGGGACCTCTCAGCTTCGGAGCCCAAGCCCCGCAGGCATCTCTCGCCTTCCCGGCTGCTTTTCCTTCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
||
| CDS GCA 90 bp | TGGGAGGCATCTTCGAAGTCACTGTGGCAGAACTCATCCGGGCTTTaGTTGACATCCTCGGGGGCCAGGAGTTTGACGAGGTCAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WEASSKSLWQNSSGL*LTSSGARSLTRSGS Trigger: GCTCCCTGACCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGATGCCTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS CCA 90 bp | CAGATTCTCGTGTCGCTTCCTTGGGAGGCATCTTCGAAGTCACTGTaGCAGAACTCATCCGGGCTTTGCTTGACATCCTCGGGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QILVSLPWEASSKSL*QNSSGLCLTSSGAR Trigger: CCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGATGCCTCCCAAGGAAGCGACACGAGAATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCACCGGACCTTTCTTGATGGGCCGATCCAGAGTCTGGATGTTGCTCTGGAACTTGGCATCTGCTaGCCCCTCTCTGCCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLHRTFLDGPIQSLDVALELGIC*PLSAQG Trigger: ACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTC...CAGAGCAACATCCAGACTCTGGATCGGCCCATCAAGAAAGGTCCGGTGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACCGGGTTATATCTCCTTCAACTGTCCATTCTTGGTCAAGGGGAGGAGGCACTTCAGGGAAGGAGTaGGGAACAGCAGCCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHRVISPSTVHSWSRGGGTSGKE*GTAAPW Trigger: CCAGGGGGCTGCTGTTCCCAACTCCTTCCCTGAAGT...GCCTCCTCCCCTTGACCAAGAATGGACAGTTGAAGGAGATATAACCCGGTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
||
| CDS-3UTR CAA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTTCGGGGGCCAGGAGTTaGACGAGGTCAGGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HMSSFGEVYFKVATTHSPSGARS*TRSGSW Trigger: CCAGCTCCCTGACCTCGTCAAACTCCTGGCCCCCGA...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CAA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCGGGGGCCAGGAGTTaGACGAGGTCAGGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPSGARS*TRSGSW Trigger: CCAGCTCCCTGACCTCGTCAAACTCCTGGCCCCCGA...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCTCCAGAGTCTGGATGTaGCTCTGGCGCGTTACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLPLGRFISKWRLPTALPSRVWM*LWRVTG Trigger: GCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGA...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
||
| CDS-3UTR CAA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCGAAGTGGACAGGTCATaGCAGGAGGTGCCGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSEVDRS*QEVPLS Trigger: AGAGAGCGGCACCTCCTGCAATGACCTGTCCACTTC...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCACTTCAGGGAAGGAGTaGGGAACAGCAGCCCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: NICLPLGRFISKWRLPTATSGKE*GTAAPW Trigger: CCAGGGGGCTGCTGTTCCCAACTCCTTCCCTGAAGT...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | CATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTGAACTTGGCATCTGCTaGCCCCTCTCTGCCCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: HMSSFGEVYFKVATTHSPELGIC*PLSAQG Trigger: ACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTC...AGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTATGTTCGACTCCCTGGAGCCTGACGTCAGAGTCCGGAGCAGGTCACTTCTCCAAAGACTTCTTTaGCCAAGGAAATTCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LLMFDSLEPDVRVRSRSLLQRLL*PRKFFR Trigger: GCGGAAGAATTTCCTTGGCAAAAGAAGTCTTTGGAG...AAGTGACCTGCTCCGGACTCTGACGTCAGGCTCCAGGGAGTCGAACATAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCATGAAAAACCTTCCCTaGGAGTCCTTGGCTAGATCG | + |
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Preference number: 5 (lower is better) Translates to: CLPLGRFISKWRLPTALPMKNLP*ESLARS Trigger: CGATCTAGCCAAGGACTCCAAGGGAAGGTTTTTCAT...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | TCTTGCAGCAGCAGTCACAATGAGAGGAGGACCACCGGGAAGGCTCACCTCCCATCTTCTGTATACTGGTaGACAAAAGATGCTGTAACC | + |
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Preference number: 5 (lower is better) Translates to: SCSSSHNERRTTGKAHLPSSVYW*TKDAVT Trigger: GGTTACAGCATCTTTTGTCAACCAGTATACAGAAGA...TGGGAGGTGAGCCTTCCCGGTGGTCCTCCTCTCATTGTGACTGCTGCTGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235241.2 |
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| CDS-3UTR CAA 90 bp | AGAAACCACAGCCACACACTGAGCCTGGACGTCTTGTCAAATCCCAAACAGGTATTGCACCTGGAAGAGTaGCAAGAGGTACCTGGACTT | + |
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Preference number: 5 (lower is better) Translates to: RNHSHTLSLDVLSNPKQVLHLEE*QEVPGL Trigger: AAGTCCAGGTACCTCTTGCAACTCTTCCAGGTGCAA...TACCTGTTTGGGATTTGACAAGACGTCCAGGCTCAGTGTGTGGCTGTGGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| CDS-3UTR CAA 90 bp | ACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCCTTCCCTTGGAGTCCTaGGCTAGATCGTTAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TYVFLWGGLFQSGDYPQPLPLES*ARSLAV Trigger: CACTGCTAACGATCTAGCCAAGGACTCCAAGGGAAG...GGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCTCTCGTGTCGCTTCCTaGGGAGGCATCTTCGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: NICLPLGRFISKWRLPTASRVAS*GGIFEV Trigger: GACTTCGAAGATGCCTCCCAAGGAAGCGACACGAGA...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCCCTCCAAAGACTTCTTTaGCCAAGGAAATTCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: CLPLGRFISKWRLPTALPLQRLL*PRKFFR Trigger: GCGGAAGAATTTCCTTGGCAAAAGAAGTCTTTGGAG...GGGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | AACATATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTTCCCTTGGAGTCCTaGGCTAGATCGTTAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: NICLPLGRFISKWRLPTALPLES*ARSLAV Trigger: CACTGCTAACGATCTAGCCAAGGACTCCAAGGGAAG...GGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | TATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCATGAAAAACCTTCCCTaGGAGTCCTTGGCTAGATCG | + |
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Preference number: 5 (lower is better) Translates to: YVFLWGGLFQSGDYPQPSMKNLP*ESLARS Trigger: CGATCTAGCCAAGGACTCCAAGGGAAGGTTTTTCAT...GGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | ACAACTAAGAGCTCGTTTCTGGTTCCACATCTAGAAAGAAATCTACCCTGTGGAGAACTTGGCATCTGCTaGCCCCTCTCTGCCCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: TTKSSFLVPHLERNLPCGELGIC*PLSAQG Trigger: ACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTC...TCCACAGGGTAGATTTCTTTCTAGATGTGGAACCAGAAACGAGCTCTTAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS TCA 90 bp | TTCCTCTTTCTGGAAAGTGATCAGGCAGGACCACCTGCCTGTCCCTaGGATAGTCCAGAATATAACGGAACAGAAAGCCATCTCTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: FLFLESDQAGPPACP*DSPEYNGTESHLCQ Trigger: TTGACAGAGATGGCTTTCTGTTCCGTTATATTCTGGACTATCTCAGGGACAGGCAGGTGGTCCTGCCTGATCACTTTCCAGAAAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | AAAGCCTGTGAGCTACTCACACGTAGCTGGTTCTTGTTGTATCTTAAGATTCTCTCTCGTGTCGCTTCCTaGGGAGGCATCTTCGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: KACELLTRSWFLLYLKILSRVAS*GGIFEV Trigger: GACTTCGAAGATGCCTCCCAAGGAAGCGACACGAGA...GAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTAGCTCACAGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | AGCACATGGGACCAAGTAAATAAAAGACAAAGGACAACTAAGAGCTCGTTTCTGGAAGTGGACAGGTCATaGCAGGAGGTGCCGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: STWDQVNKRQRTTKSSFLEVDRS*QEVPLS Trigger: AGAGAGCGGCACCTCCTGCAATGACCTGTCCACTTC...CAGAAACGAGCTCTTAGTTGTCCTTTGTCTTTTATTTACTTGGTCCCATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | AGCACATGGGACCAAGTAAATAAAAGACAAAGGACAACTAAGAGCTCGTTTCTGTCCAGAGTCTGGATGTaGCTCTGGCGCGTTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: STWDQVNKRQRTTKSSFLSRVWM*LWRVTG Trigger: GCCTGTAACGCGCCAGAGCAACATCCAGACTCTGGA...CAGAAACGAGCTCTTAGTTGTCCTTTGTCTTTTATTTACTTGGTCCCATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | ATGTCTTCCTTTGGGGAGGTTTATTTCAAAGTGGCGACTACCCACAGCCCTCCCTCTTCTGTATACTGGTaGACAAAAGATGCTGTAACC | + |
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Preference number: 5 (lower is better) Translates to: MSSFGEVYFKVATTHSPPSSVYW*TKDAVT Trigger: GGTTACAGCATCTTTTGTCAACCAGTATACAGAAGA...GGGAGGGCTGTGGGTAGTCGCCACTTTGAAATAAACCTCCCCAAAGGAAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | ATGATTCCACACTTAAGCTCTAGTAGGTGTACGTTTCTATGTGTGTATGAATGGGCAGTTCGGATGCTGTaGTGTGAGCAGTGCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: MIPHLSSSRCTFLCVYEWAVRML*CEQCRQ Trigger: TTGCCTGCACTGCTCACACAACAGCATCCGAACTGC...CCATTCATACACACATAGAAACGTACACCTACTAGAGCTTAAGTGTGGAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| CDS CCA 90 bp | TTTCGCTCAGGGAAGCGATCTGGAATTTTTATCTTCAAGAAATCCTaGATACATTTCTCCAGCTCTTCCTCGATGGAGAGCTTTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FRSGKRSGIFIFKKS*IHFSSSSSMESFSF Trigger: GAAGGAAAAGCTCTCCATCGAGGAAGAGCTGGAGAAATGTATCCAGGATTTCTTGAAGATAAAAATTCCAGATCGCTTCCCTGAGCGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS-3UTR CAA 90 bp | CTTACCTTAGCGAGTGAGTGCTGGAGACTCAGTTCTTGCGAAGAAATAACCTTTGAACAGATAAATCCTTaGCACCTGGAAGAGTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: LTLASECWRLSSCEEITFEQINP*HLEELQ Trigger: TTGCAACTCTTCCAGGTGCAAAGGATTTATCTGTTC...AAAGGTTATTTCTTCGCAAGAACTGAGTCTCCAGCACTCACTCGCTAAGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| CDS-3UTR CAA 90 bp | TACTCACACGTAGCTGGTTCTTGTTGTATCTTAAGATTCTCAGCACATGGGACCTCTTCTGTATACTGGTaGACAAAAGATGCTGTAACC | + |
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Preference number: 5 (lower is better) Translates to: YSHVAGSCCILRFSAHGTSSVYW*TKDAVT Trigger: GGTTACAGCATCTTTTGTCAACCAGTATACAGAAGA...GGTCCCATGTGCTGAGAATCTTAAGATACAACAAGAACCAGCTACGTGTGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236889.2 |
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| CDS GCA 72 bp | TGGGAAGGAAAAGCAGCCGGGAAGGCGAGAGATGCCTaGGGGGCTTGGGCTCCGAAGCTGAGAGGTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: WEGKAAGKARDA*GAWAPKLRGPT Trigger: CGTGGGACCTCTCAGCTTCGGAGCCCAAGCCCCGCAGGCATCTCTCGCCTTCCCGGCTGCTTTTCCTTCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| CDS CAA 90 bp | GAGGCATCTTCGAAGTCACTGTGGCAGAACTCATCCGGGCTTTGCTaGACATCCTCGGGGGCCAGGAGTTTGACGAGGTCAGGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: EASSKSLWQNSSGLC*TSSGARSLTRSGSW Trigger: CCAGCTCCCTGACCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGATGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 90 bp | TTGGGAGGCATCTTCGAAGTCACTGTGGCAGAACTCATCCGGGCTTaGCTTGACATCCTCGGGGGCCAGGAGTTTGACGAGGTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGGIFEVTVAELIRA*LDILGGQEFDEVRE Trigger: CTCCCTGACCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGATGCCTCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 72 bp | TCCGGGCTTTGCTTGACATCCTCGGGGGCCAGGAGTTaGACGAGGTCAGGGAGCTGGAAGTACTCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGLCLTSSGARS*TRSGSWKYSAS Trigger: AGAAGCTGAGTACTTCCAGCTCCCTGACCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS GCA 72 bp | TCTTCGAAGTCACTGTGGCAGAACTCATCCGGGCTTTaGTTGACATCCTCGGGGGCCAGGAGTTTGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSKSLWQNSSGL*LTSSGARSLTR Trigger: CCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 72 bp | TCGAAGTCACTGTGGCAGAACTCATCCGGGCTTTGCTaGACATCCTCGGGGGCCAGGAGTTTGACGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SKSLWQNSSGLC*TSSGARSLTRS Trigger: TGACCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 90 bp | CAGAACTCATCCGGGCTTTGCTTGACATCCTCGGGGGCCAGGAGTTaGACGAGGTCAGGGAGCTGGAAGTACTCAGCTTCTCTTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QNSSGLCLTSSGARS*TRSGSWKYSASLFS Trigger: GCTGAAAAGAGAAGCTGAGTACTTCCAGCTCCCTGACCTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CCA 72 bp | TCCTCGGGGGCCAGGAGTTTGACGAGGTCAGGGAGCTaGAAGTACTCAGCTTCTCTTTTCAGCCTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSGARSLTRSGS*KYSASLFSLPL Trigger: AAGAGGAAGGCTGAAAAGAGAAGCTGAGTACTTCCAGCTCCCTGACCTCGTCAAACTCCTGGCCCCCGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CCA 72 bp | GTGTCGCTTCCTTGGGAGGCATCTTCGAAGTCACTGTaGCAGAACTCATCCGGGCTTTGCTTGACATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VSLPWEASSKSL*QNSSGLCLTSS Trigger: CGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGATGCCTCCCAAGGAAGCGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 72 bp | ATCTTCGAAGTCACTGTGGCAGAACTCATCCGGGCTTaGCTTGACATCCTCGGGGGCCAGGAGTTTGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: IFEVTVAELIRA*LDILGGQEFDE Trigger: CTCGTCAAACTCCTGGCCCCCGAGGATGTCAAGCAAAGCCCGGATGAGTTCTGCCACAGTGACTTCGAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS TCA 72 bp | CTGGAAAGTGATCAGGCAGGACCACCTGCCTGTCCCTaGGATAGTCCAGAATATAACGGAACAGAAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LESDQAGPPACP*DSPEYNGTESH Trigger: ATGGCTTTCTGTTCCGTTATATTCTGGACTATCTCAGGGACAGGCAGGTGGTCCTGCCTGATCACTTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 72 bp | CCATCTCTGTCAATGAAAAACCTTCCCTTGGAGTCCTaGGCTAGATCGTTAGCAGTGTCTCTCTTTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLSMKNLPLES*ARSLAVSLFGE Trigger: CTCCCCAAAGAGAGACACTGCTAACGATCTAGCCAAGGACTCCAAGGGAAGGTTTTTCATTGACAGAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 90 bp | AATCCAAACCTTATAGAACAGATAAATCCTTTGCACCTGGAAGAGTaGCAAGAGGTACCTGGACTTAGAGGCATTCAGAGAGCCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NPNLIEQINPLHLEE*QEVPGLRGIQRAQR Trigger: CCTCTGGGCTCTCTGAATGCCTCTAAGTCCAGGTACCTCTTGCAACTCTTCCAGGTGCAAAGGATTTATCTGTTCTATAAGGTTTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096572.2 |
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| CDS CCA 72 bp | AGAAATCCTGGATACATTTCTCCAGCTCTTCCTCGATaGAGAGCTTTTCCTTCGCAGCTTTCTTTTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RNPGYISPALPR*RAFPSQLSFCC Trigger: GCAGCAAAAAGAAAGCTGCGAAGGAAAAGCTCTCCATCGAGGAAGAGCTGGAGAAATGTATCCAGGATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CAA 72 bp | AACAGAAAGCCATCTCTGTCAATGAAAAACCTTCCCTaGGAGTCCTTGGCTAGATCGTTAGCAGTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: NRKPSLSMKNLP*ESLARSLAVSL Trigger: GAGAGACACTGCTAACGATCTAGCCAAGGACTCCAAGGGAAGGTTTTTCATTGACAGAGATGGCTTTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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| CDS CCA 72 bp | GGGAAGCGATCTGGAATTTTTATCTTCAAGAAATCCTaGATACATTTCTCCAGCTCTTCCTCGATGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GKRSGIFIFKKS*IHFSSSSSMES Trigger: GCTCTCCATCGAGGAAGAGCTGGAGAAATGTATCCAGGATTTCTTGAAGATAAAAATTCCAGATCGCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091927.5 ENSMUST00000236889.2 |
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