Pregenerated sensors for KCTD15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030499Ensembl transcript IDs: ENSMUST00000032709.3, ENSMUST00000108069.8, ENSMUST00000108070.9, ENSMUST00000206501.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGCCACCTCACATCTGTCCCCACAGACCCAGCTCAGCAGGCACCTaGGCCCCGAATGCCGGCAGCCCATCCTTTGCAAGGCTTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: PPPHICPHRPSSAGT*APNAGSPSFARLAE Trigger: TTCAGCAAGCCTTGCAAAGGATGGGCTGCCGGCATTCGGGGCCCAGGTGCCTGCTGAGCTGGGTCTGTGGGGACAGATGTGAGGTGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CCA 90 bp | GCAGAGGACGCTATACCAGGCCGAGGAGCAGGAGGGCTGGGAGGCTaGCAGCACAGTTGCAGCAGGAGCAGCAGGTCACATCAACCAGGT | + |
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Preference number: 1 (lower is better) Translates to: AEDAIPGRGAGGLGG*QHSCSRSSRSHQPG Trigger: ACCTGGTTGATGTGACCTGCTGCTCCTGCTGCAACTGTGCTGCCAGCCTCCCAGCCCTCCTGCTCCTCGGCCTGGTATAGCGTCCTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CCA 90 bp | ATATGTCTGCCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTGACTaGCCCAGCAGAGGACGCTATACCAGGCCGAGGAGCAGGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: ICLPSVEEKQLLWSD*PSRGRYTRPRSRRA Trigger: AGCCCTCCTGCTCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR TCA 90 bp | CACCTGGGCCCCGAATGCCGGCAGCCCATCCTTTGCAAGGCTTGCTaGACAGTTGGACTGAGAACTGAGCACCAGGTAAAAGCAGCGATG | + |
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Preference number: 1 (lower is better) Translates to: HLGPECRQPILCKAC*TVGLRTEHQVKAAM Trigger: CATCGCTGCTTTTACCTGGTGCTCAGTTCTCAGTCCAACTGTTCAGCAAGCCTTGCAAAGGATGGGCTGCCGGCATTCGGGGCCCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR TCA 90 bp | CATGCTGACTGGGTGGGCGGAGACTTCTCCAAGAACCCCCAGATGTaGGCACAGTCAGTCGGGATTGGAAGCCCCTGGGCATTAACAGGT | + |
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Preference number: 1 (lower is better) Translates to: HADWVGGDFSKNPQM*AQSVGIGSPWALTG Trigger: ACCTGTTAATGCCCAGGGGCTTCCAATCCCGACTGACTGTGCTCACATCTGGGGGTTCTTGGAGAAGTCTCCGCCCACCCAGTCAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR TCA 90 bp | AAAAATATGTCTGCCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTaGCTGGCCCAGCAGAGGACGCTATACCAGGCCGAGGAGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KNMSAKCGGETAALE*LAQQRTLYQAEEQE Trigger: CTCCTGCTCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CCA 90 bp | AGACTTCTCCAAGAACCCCCAGATGTGAGCACAGTCAGTCGGGATTaGAAGCCCCTGGGCATTAACAGGTCAGGTGTGCACCAAGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: RLLQEPPDVSTVSRD*KPLGINRSGVHQVQ Trigger: CTGCACTTGGTGCACACCTGACCTGTTAATGCCCAGGGGCTTCCAATCCCGACTGACTGTGCTCACATCTGGGGGTTCTTGGAGAAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CCA 90 bp | TGTAGAAAAATATGTCTGCCAAGTGTGGAGGAGAAACAGCTGCTCTaGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGCCGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: CRKICLPSVEEKQLL*SDWPSRGRYTRPRS Trigger: GCTCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATATTTTTCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR GCA 90 bp | TTAAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTaGCGGCCAGGGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LKESYTSLQALYTRG*RPGHPICQFFAVPP Trigger: TGGAGGAACCGCAAAGAACTGACAGATGGGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR GCA 90 bp | AATACTGTAGAAAAATATGTCTGCCAAGTGTGGAGGAGAAACAGCTaGTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGCCGA | + |
|
Preference number: 1 (lower is better) Translates to: NTVEKYVCQVWRRNS*SGVTGPAEDAIPGR Trigger: TCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATATTTTTCTACAGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CCA 90 bp | GCATTAACAGGTCAGGTGTGCACCAAGTGCAGTCTGGGACACAGGTaGCAGCAGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: ALTGQVCTKCSLGHR*QQSISDKSHRVTKP Trigger: GGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCTGCTGCCACCTGTGTCCCAGACTGCACTTGGTGCACACCTGACCTGTTAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR GCA 90 bp | AGCGAGACAGTTAGTACTGTTTTAAATACTGTAGAAAAATATGTCTaGCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: SETVSTVLNTVEKYV*QVWRRNSCSGVTGP Trigger: TGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATATTTTTCTACAGTATTTAAAACAGTACTAACTGTCTCGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCAGCAGGCACCTGGGCCCCGAATGCCGGCAGCCCATCCTTTGCAAGGCGGAGGGCTGGGAGGCTaGCAGCACAGTTGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PAQQAPGPRMPAAHPLQGGGLGG*QHSCSR Trigger: CCTGCTGCAACTGTGCTGCCAGCCTCCCAGCCCTCC...GCCTTGCAAAGGATGGGCTGCCGGCATTCGGGGCCCAGGTGCCTGCTGAGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCAGCAGGCACCTGGGCCCCGAATGCCGGCAGCCCATCCTTTGCAAGGCCTGCTCTGGAGTGACTaGCCCAGCAGAGGACGCTAT | + |
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Preference number: 2 (lower is better) Translates to: PAQQAPGPRMPAAHPLQGLLWSD*PSRGRY Trigger: ATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAG...GCCTTGCAAAGGATGGGCTGCCGGCATTCGGGGCCCAGGTGCCTGCTGAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGGACACGCCTCCGCACCTGGCATTCCCAGGGGTGAGTGCAGACCCTCCGCTATTTCCATGTCCCTaGGGTTGCCCCAGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SVDTPPHLAFPGVSADPPLFPCP*GCPRTE Trigger: CTCAGTCCTGGGGCAACCCCAGGGACATGGAAATAG...CGGAGGGTCTGCACTCACCCCTGGGAATGCCAGGTGCGGAGGCGTGTCCACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | CCACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACCCAGCTCAGCCTGCTCTGGAGTGACTaGCCCAGCAGAGGACGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: PRPVAPATSHLSPQTQLSLLWSD*PSRGRY Trigger: ATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAG...GCTGAGCTGGGTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | CCACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACCCAGCTCAGCTGGAGGAGAAACAGCTaGTCTGGAGTGACTGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PRPVAPATSHLSPQTQLSWRRNS*SGVTGP Trigger: TGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCA...GCTGAGCTGGGTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGAGAGGAGCAGGAGGGCTaGGAGGCTGGCAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: LPSVEEKQLLWSDWPSRGEEQEG*EAGSTV Trigger: AACTGTGCTGCCAGCCTCCCAGCCCTCCTGCTCCTC...TCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | GCACCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCAACAGCTGCTCTGGAGTaGCTGGCCCAGCAGAGGACG | + |
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Preference number: 2 (lower is better) Translates to: APGKSSDGWSSLALPTCATAALE*LAQQRT Trigger: CGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGT...TGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCTGGAGGGTGGTTCCCTaGGCTGGGGACCCAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VIYKSTGVIHKGVPARAPWRVVP*AGDPES Trigger: ACTCTCTGGGTCCCCAGCTCAGGGAACCACCCTCCA...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCCCATGTCCCTGGGGTTaGCCCAGGACTGAGGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VIYKSTGVIHKGVPARAPPCPWG*PRTEGS Trigger: AGACCCCTCAGTCCTGGGGCAACCCCAGGGACATGG...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | GCACCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCACCATGTCCCTGGGGTTaGCCCAGGACTGAGGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: APGKSSDGWSSLALPTCAPCPWG*PRTEGS Trigger: AGACCCCTCAGTCCTGGGGCAACCCCAGGGACATGG...TGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCAGGAGGGCTGGGAGGCTaGCAGCACAGTTGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAGGLGG*QHSCSR Trigger: CCTGCTGCAACTGTGCTGCCAGCCTCCCAGCCCTCC...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCCCTGTCGTCTGGGAGAAGAGCAGATCTGTGAGGACCTCTCAGGACCAGGAGGAGCAGGAGGGCTaGGAGGCTGGCAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: FGPVVWEKSRSVRTSQDQEEQEG*EAGSTV Trigger: AACTGTGCTGCCAGCCTCCCAGCCCTCCTGCTCCTC...CTGGTCCTGAGAGGTCCTCACAGATCTGCTCTTCTCCCAGACGACAGGGCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CAA 90 bp | GCCGGCCAGGGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTaGGGAGGAGCTAAGGGAGATGTGACAAGGCCAGGGTATCCATCT | + |
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Preference number: 2 (lower is better) Translates to: AGQGTPSVSSLRFLH*GGAKGDVTRPGYPS Trigger: AGATGGATACCCTGGCCTTGTCACATCTCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCCCTGGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCATGGAGGGTGGTTCCCTaGGCTGGGGACCCAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAWRVVP*AGDPES Trigger: ACTCTCTGGGTCCCCAGCTCAGGGAACCACCCTCCA...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCATGTCCCTGGGGTTaGCCCAGGACTGAGGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAPCPWG*PRTEGS Trigger: AGACCCCTCAGTCCTGGGGCAACCCCAGGGACATGG...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCCCTGTCGTCTGGGAGAAGAGCAGATCTGTGAGGACCTCTCAGGACCAGGGCTGGCAGCACAGTTaGAGCAGGAGCAGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FGPVVWEKSRSVRTSQDQGWQHS*SRSSRS Trigger: TGACCTGCTGCTCCTGCTGCAACTGTGCTGCCAGCC...CTGGTCCTGAGAGGTCCTCACAGATCTGCTCTTCTCCCAGACGACAGGGCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGCTGTGGCCCCCATGCTaGCTGGGTGGGCGGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: KGVIYKSTGVIHKGVPARLWPPC*LGGRRL Trigger: AAGTCTCCGCCCACCCAGTCAGCATGGGGGCCACAG...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGATCACAAAGCCCCCATTaGCCTCTTCCCCACTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGSQSPH*PLPHCP Trigger: AGGGCAGTGGGGAAGAGGGCAATGGGGGCTTTGTGA...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAGCACCAAGTGCAGTCTaGGACACAGGTGGCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGAPSAV*DTGGSR Trigger: TCTGCTGCCACCTGTGTCCCAGACTGCACTTGGTGC...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCCCTGTCGTCTGGGAGAAGAGCAGATCTGTGAGGACCTCTCAGGACCAGCTATTTCCATGTCCCTaGGGTTGCCCCAGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: FGPVVWEKSRSVRTSQDQLFPCP*GCPRTE Trigger: CTCAGTCCTGGGGCAACCCCAGGGACATGGAAATAG...CTGGTCCTGAGAGGTCCTCACAGATCTGCTCTTCTCCCAGACGACAGGGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCGAGAAACAGCTGCTCTaGAGTGACTGGCCCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VIYKSTGVIHKGVPARAPEKQLL*SDWPSR Trigger: TCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTC...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | ACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACCCAGCTCAGCAGTATGTCTGCCAAGTGTaGAGGAGAAACAGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TSCSTRHLTSVPTDPAQQYVCQV*RRNSCS Trigger: AGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATA...CTGCTGAGCTGGGTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | GCACCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCAGTCTTGTGCCCACTGTaGAGCACAAACAGGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: APGKSSDGWSSLALPTCAVLCPL*STNRQN Trigger: GTTCTGCCTGTTTGTGCTTCACAGTGGGCACAAGAC...TGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGGCTGGCAGCACAGTTaGAGCAGGAGCAGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KGVIYKSTGVIHKGVPARGWQHS*SRSSRS Trigger: TGACCTGCTGCTCCTGCTGCAACTGTGCTGCCAGCC...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCAGGGATTGGAAGCCCCTaGGCATTAACAGGTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAGIGSP*ALTGQV Trigger: CACCTGACCTGTTAATGCCCAGGGGCTTCCAATCCC...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCAGTCTTGTGCCCACTGTaGAGCACAAACAGGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAVLCPL*STNRQN Trigger: GTTCTGCCTGTTTGTGCTTCACAGTGGGCACAAGAC...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR TCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCCACTTGGTGTGCATATaGATGGGGAAACTGGCGCTA | + |
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Preference number: 2 (lower is better) Translates to: VIYKSTGVIHKGVPARAPHLVCI*MGKLAL Trigger: TAGCGCCAGTTTCCCCATTCATATGCACACCAAGTG...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCCCCATTGCCCTCTTCCCGAGGAGCAGGAGGGCTaGGAGGCTGGCAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: RVSQIKVTESQSPHCPLPEEQEG*EAGSTV Trigger: AACTGTGCTGCCAGCCTCCCAGCCCTCCTGCTCCTC...GGGAAGAGGGCAATGGGGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAGATGTGACAAGGGAGAAACAGCTGCTCTaGAGTGACTGGCCCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VSSLRFLHLGGAKGDVTREKQLL*SDWPSR Trigger: TCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTC...CCTTGTCACATCTCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCCCTGTCGTCTGGGAGAAGAGCAGATCTGTGAGGACCTCTCAGGACCAGAGTCTGGGACACAGGTaGCAGCAGAGTATCTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: FGPVVWEKSRSVRTSQDQSLGHR*QQSISD Trigger: ATCTGAGATACTCTGCTGCCACCTGTGTCCCAGACT...CTGGTCCTGAGAGGTCCTCACAGATCTGCTCTTCTCCCAGACGACAGGGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCCTTTGCAAGGCTTGCTaGACAGTTGGACTGAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: VIYKSTGVIHKGVPARAPLCKAC*TVGLRT Trigger: AGTTCTCAGTCCAACTGTTCAGCAAGCCTTGCAAAG...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACACTTGGTGTGCATATaGATGGGGAAACTGGCGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAHLVCI*MGKLAL Trigger: TAGCGCCAGTTTCCCCATTCATATGCACACCAAGTG...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGTGGAGGAGAAACAGCTaGTCTGGAGTGACTGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KGVIYKSTGVIHKGVPARWRRNS*SGVTGP Trigger: TGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCA...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | GCACCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCATATGTCTGCCAAGTGTaGAGGAGAAACAGCTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: APGKSSDGWSSLALPTCAYVCQV*RRNSCS Trigger: AGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATA...TGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGTGACAAGGCCAGGGTATCCATCTTTTGGCCCTGTCGTCTGGGAGAAGAGTCTGGGACACAGGTaGCAGCAGAGTATCTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GDVTRPGYPSFGPVVWEKSLGHR*QQSISD Trigger: ATCTGAGATACTCTGCTGCCACCTGTGTCCCAGACT...CTTCTCCCAGACGACAGGGCCAAAAGATGGATACCCTGGCCTTGTCACATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGGGATTGGAAGCCCCTaGGCATTAACAGGTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KGVIYKSTGVIHKGVPARGIGSP*ALTGQV Trigger: CACCTGACCTGTTAATGCCCAGGGGCTTCCAATCCC...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCAAGGACCAGTCCTTGTTaGAAATCTGGGGTTAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARARTSPC*KSGVKS Trigger: GCTCTTAACCCCAGATTTCCAACAAGGACTGGTCCT...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCCCCATTGCCCTCTTCCCCTATTTCCATGTCCCTaGGGTTGCCCCAGGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RVSQIKVTESQSPHCPLPLFPCP*GCPRTE Trigger: CTCAGTCCTGGGGCAACCCCAGGGACATGGAAATAG...GGGAAGAGGGCAATGGGGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCCCCATTGCCCTCTTCCCGAGAAACAGCTGCTCTaGAGTGACTGGCCCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RVSQIKVTESQSPHCPLPEKQLL*SDWPSR Trigger: TCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTC...GGGAAGAGGGCAATGGGGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCCCCATTGCCCTCTTCCCGTCTTGTGCCCACTGTaGAGCACAAACAGGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RVSQIKVTESQSPHCPLPVLCPL*STNRQN Trigger: GTTCTGCCTGTTTGTGCTTCACAGTGGGCACAAGAC...GGGAAGAGGGCAATGGGGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGAGGACCAGTCCTTGTTaGAAATCTGGGGTTAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KGVIYKSTGVIHKGVPARRTSPC*KSGVKS Trigger: GCTCTTAACCCCAGATTTCCAACAAGGACTGGTCCT...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGGTCTTACAGACAGGCTAGTTTAGGACATTTCATTAACACTTGGTGTGCAGCACCAAGTGCAGTCTaGGACACAGGTGGCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SGSYRQASLGHFINTWCAAPSAV*DTGGSR Trigger: TCTGCTGCCACCTGTGTCCCAGACTGCACTTGGTGC...TGCACACCAAGTGTTAATGAAATGTCCTAAACTAGCCTGTCTGTAAGACCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGACATTTCATTAACACTTaGTGTGCATATGAATGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGHFINT*CAYEWG Trigger: TCCCCATTCATATGCACACCAAGTGTTAATGAAATG...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACATTTCATTAACACTTaGTGTGCATATGAATGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVIYKSTGVIHKGVPARAHFINT*CAYEWG Trigger: TCCCCATTCATATGCACACCAAGTGTTAATGAAATG...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR GCA 90 bp | CGCGGTGTGTTCACACAAACACAGAACAATTGTACATCAGCATCTTTACAATATTGGAGGAGAAACAGCTaGTCTGGAGTGACTGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RGVFTQTQNNCTSASLQYWRRNS*SGVTGP Trigger: TGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCA...ATATTGTAAAGATGCTGATGTACAATTGTTCTGTGTTTGTGTGAACACACCGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR GCA 72 bp | GGACACGCCTCCGCACCTGGCATTCCCAGGGGTGAGTaGAGACCCTCCGATCCCGCCCCCAGTCTTGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GHASAPGIPRGE*RPSDPAPSLVP Trigger: GGGCACAAGACTGGGGGCGGGATCGGAGGGTCTGCACTCACCCCTGGGAATGCCAGGTGCGGAGGCGTGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR TCA 72 bp | CCGTGGACACGCCTCCGCACCTGGCATTCCCAGGGGTaGGTGCAGACCCTCCGATCCCGCCCCCAGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PWTRLRTWHSQG*VQTLRSRPQSC Trigger: ACAAGACTGGGGGCGGGATCGGAGGGTCTGCACTCACCCCTGGGAATGCCAGGTGCGGAGGCGTGTCCACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR GCA 72 bp | GGGGTGCCGGCCAGGGCACCCCATCTGTCAGTTCTTTaGGGTTCCTCCACTTGGGAGGAGCTAAGGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GVPARAPHLSVL*GSSTWEELREM Trigger: CATCTCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCCCTGGCCGGCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR TCA 72 bp | TGGGTGGGCGGAGACTTCTCCAAGAACCCCCAGATGTaGGCACAGTCAGTCGGGATTGGAAGCCCCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WVGGDFSKNPQM*AQSVGIGSPWA Trigger: TGCCCAGGGGCTTCCAATCCCGACTGACTGTGCTCACATCTGGGGGTTCTTGGAGAAGTCTCCGCCCACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR CCA 72 bp | CCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTGACTaGCCCAGCAGAGGACGCTATACCAGGCCGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSVEEKQLLWSD*PSRGRYTRPRS Trigger: GCTCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR TCA 72 bp | TCTGCCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTaGCTGGCCCAGCAGAGGACGCTATACCAGGCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SAKCGGETAALE*LAQQRTLYQAE Trigger: CTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR CCA 72 bp | CCCATTCCTGAGATAAGCTGTGGCCCCCATGCTGACTaGGTGGGCGGAGACTTCTCCAAGAACCCCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PIPEISCGPHAD*VGGDFSKNPQM Trigger: CATCTGGGGGTTCTTGGAGAAGTCTCCGCCCACCCAGTCAGCATGGGGGCCACAGCTTATCTCAGGAATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAGATGTGACAAGGGTCACAAAGCCCCCATaGCCCTCTTCCCCACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VSSLRFLHLGGAKGDVTRVTKPP*PSSPLP Trigger: GGGCAGTGGGGAAGAGGGCAATGGGGGCTTTGTGAC...CCTTGTCACATCTCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR GCA 72 bp | AGCCCCTGGGCATTAACAGGTCAGGTGTGCACCAAGTaGAGTCTGGGACACAGGTGGCAGCAGAGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPWALTGQVCTK*SLGHRWQQSIS Trigger: TGAGATACTCTGCTGCCACCTGTGTCCCAGACTGCACTTGGTGCACACCTGACCTGTTAATGCCCAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR CCA 72 bp | ATATGTCTGCCAAGTGTGGAGGAGAAACAGCTGCTCTaGAGTGACTGGCCCAGCAGAGGACGCTATACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ICLPSVEEKQLL*SDWPSRGRYTR Trigger: CCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAGACATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR CCA 72 bp | ACAAGGCCAGGGTATCCATCTTTTGGCCCTGTCGTCTaGGAGAAGAGCAGATCTGTGAGGACCTCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TRPGYPSFGPVV*EKSRSVRTSQD Trigger: GTCCTGAGAGGTCCTCACAGATCTGCTCTTCTCCCAGACGACAGGGCCAAAAGATGGATACCCTGGCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR TCA 72 bp | CCCGAATGCCGGCAGCCCATCCTTTGCAAGGCTTGCTaGACAGTTGGACTGAGAACTGAGCACCAGGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PECRQPILCKAC*TVGLRTEHQVK Trigger: TTTTACCTGGTGCTCAGTTCTCAGTCCAACTGTTCAGCAAGCCTTGCAAAGGATGGGCTGCCGGCATTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR GCA 72 bp | TCATATACAAGTCTACAGGCGTTATACACAAGGGGGTaGCGGCCAGGGCACCCCATCTGTCAGTTCTTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: SYTSLQALYTRG*RPGHPICQFFA Trigger: CGCAAAGAACTGACAGATGGGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR TCA 72 bp | CCTTTGCAAGGCTTGCTGAACAGTTGGACTGAGAACTaGGCACCAGGTAAAAGCAGCGATGGATGGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PLQGLLNSWTEN*APGKSSDGWSS Trigger: GGAGGACCATCCATCGCTGCTTTTACCTGGTGCTCAGTTCTCAGTCCAACTGTTCAGCAAGCCTTGCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR TCA 72 bp | CTTTTGGCCCTGTCGTCTGGGAGAAGAGCAGATCTGTaGGGACCTCTCAGGACCAGTCCTTGTTGGAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLALSSGRRADL*GPLRTSPCWKS Trigger: AGATTTCCAACAAGGACTGGTCCTGAGAGGTCCTCACAGATCTGCTCTTCTCCCAGACGACAGGGCCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR CCA 72 bp | GGTCAGGTGTGCACCAAGTGCAGTCTGGGACACAGGTaGCAGCAGAGTATCTCAGATAAAAGTCACAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GQVCTKCSLGHR*QQSISDKSHRV Trigger: GACTCTGTGACTTTTATCTGAGATACTCTGCTGCCACCTGTGTCCCAGACTGCACTTGGTGCACACCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR CCA 90 bp | CCACAGACCCAGCTCAGCAGGCACCTGGGCCCCGAATGCCGGCAGCCCATCCTTGGCAGTGGGATCCCCTaGGCAGCCAGGGGAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLSRHLGPECRQPILGSGIP*AARGDT Trigger: TGTGTCTCCCCTGGCTGCCCAGGGGATCCCACTGCC...AAGGATGGGCTGCCGGCATTCGGGGCCCAGGTGCCTGCTGAGCTGGGTCTGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGACCCAGCTCAGCAGGCACCTGGGCCCCGAATGCCGGCAGCCCATCCTTCACCCAAGTCAGGGGTaGCCCGTACCACCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLSRHLGPECRQPILHPSQG*PVPPGS Trigger: ACTGCCTGGTGGTACGGGTCACCCCTGACTTGGGTG...AAGGATGGGCTGCCGGCATTCGGGGCCCAGGTGCCTGCTGAGCTGGGTCTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | TCCGTGGACACGCCTCCGCACCTGGCATTCCCAGGGGTGAGTGCAGACCCTCCGAGGCGACCGGGTGAGTaGCAGCCGGGACATATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVDTPPHLAFPGVSADPPRRPGE*QPGHIS Trigger: GGAAATATGTCCCGGCTGTCACTCACCCGGTCGCCT...CGGAGGGTCTGCACTCACCCCTGGGAATGCCAGGTGCGGAGGCGTGTCCACGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR GCA 90 bp | GGACTCTGTTCCACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLCSTSCSTRHLTSVPTDAAAAV*VKRGPA Trigger: AGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGC...GTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGTGGAACAGAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| 3UTR CAA 72 bp | GGGGGTGCCGGCCAGGGCACCCCATCTGTCAGTTCTTaGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGAGQGTPSVSS*RFLHLGGAKGD Trigger: ATCTCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCCCTGGCCGGCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACAGGCAGAACTCCTCAGCGCTATTTCCATGTCCCTGGGGTTGCCCCAGGGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNRQNSSALFPCPWGCPRAAAAV*VKRGPA Trigger: AGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGC...CCTGGGGCAACCCCAGGGACATGGAAATAGCGCTGAGGAGTTCTGCCTGTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGAAGGCGACCGGGTGAGTaGCAGCCGGGACATATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSVEEKQLLWSDWPSRGRRPGE*QPGHIS Trigger: GGAAATATGTCCCGGCTGTCACTCACCCGGTCGCCT...TCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGACACAGGCGACCGGGTaGGTGACAGCCGGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: EEKQLLWSDWPSRGRYTRTQATG*VTAGTY Trigger: ATATGTCCCGGCTGTCACTCACCCGGTCGCCTGTGT...CCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | CCACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACCCAGCTCAGCCTGCTCGTATACATGTaGCCTCCCACATCGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRPVAPATSHLSPQTQLSLLVYM*PPTSMC Trigger: GCACATCGATGTGGGAGGTCACATGTATACGAGCAG...GCTGAGCTGGGTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCCACCCAAGTCAGGGGTaGCCCGTACCACCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIYKSTGVIHKGVPARAPHPSQG*PVPPGS Trigger: ACTGCCTGGTGGTACGGGTCACCCCTGACTTGGGTG...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR GCA 90 bp | AACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGCCGAGGACGGCTGCGACGTCTTTaGTCTTGGTCTTGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSCSGVTGPAEDAIPGRGRLRRL*SWSCCQ Trigger: CTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCG...TCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | GGACTCTGTTCCACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACCGGCTGCGACGTCTTTaGTCTTGGTCTTGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCSTSCSTRHLTSVPTDRLRRL*SWSCCQ Trigger: CTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCG...GTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGTGGAACAGAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGVRWLW*AELAVG Trigger: TCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCAC...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGAGATGTGACAAGGCCAGGGTATCCATCTTTTGGCCCTGTCGTCTGGGAGAAGCACCCAAGTCAGGGGTaGCCCGTACCACCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GDVTRPGYPSFGPVVWEKHPSQG*PVPPGS Trigger: ACTGCCTGGTGGTACGGGTCACCCCTGACTTGGGTG...CTTCTCCCAGACGACAGGGCCAAAAGATGGATACCCTGGCCTTGTCACATCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | AACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGCCGAGGAATCGATGTGCACGGGTaGGTTGGCTTTGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSCSGVTGPAEDAIPGRGIDVHG*VGFGEL Trigger: CAGCTCACCAAAGCCAACGCACCCGTGCACATCGAT...TCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCAGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVIYKSTGVIHKGVPARAVRWLW*AELAVG Trigger: TCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCAC...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | TTAACACTTGGTGTGCATATGAATGGGGAAACTGGCGCTAGGGTGGAGGGTGGTGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGVHMNGETGARVEGGAAAAV*VKRGPA Trigger: AGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGC...ACCACCCTCCACCCTAGCGCCAGTTTCCCCATTCATATGCACACCAAGTGTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGACGGCTGCGACGTCTTTaGTCTTGGTCTTGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGRLRRL*SWSCCQ Trigger: CTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCG...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAATCGATGTGCACGGGTaGGTTGGCTTTGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGIDVHG*VGFGEL Trigger: CAGCTCACCAAAGCCAACGCACCCGTGCACATCGAT...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGACACAGGCGACCGGGTaGGTGACAGCCGGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: KGVIYKSTGVIHKGVPARTQATG*VTAGTY Trigger: ATATGTCCCGGCTGTCACTCACCCGGTCGCCTGTGT...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | TTAACACTTGGTGTGCATATGAATGGGGAAACTGGCGCTAGGGTGGAGGGTGGTGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTLGVHMNGETGARVEGGVRWLW*AELAVG Trigger: TCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCAC...ACCACCCTCCACCCTAGCGCCAGTTTCCCCATTCATATGCACACCAAGTGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGGCAGAACTCCTCAGCGCTATTTCCATGTCCCTGGGGTTGCCCCAGGCTGCTCGTATACATGTaGCCTCCCACATCGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNRQNSSALFPCPWGCPRLLVYM*PPTSMC Trigger: GCACATCGATGTGGGAGGTCACATGTATACGAGCAG...CCTGGGGCAACCCCAGGGACATGGAAATAGCGCTGAGGAGTTCTGCCTGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGACTGCTCGTATACATGTaGCCTCCCACATCGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGLLVYM*PPTSMC Trigger: GCACATCGATGTGGGAGGTCACATGTATACGAGCAG...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCAGCGAGAACGCTGAACCCTCTCTaGAACAGCCTTTCTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GKSSDGWSSLALPTCAARTLNPL*NSLSRT Trigger: GGTCCTAGAAAGGCTGTTTCAGAGAGGGTTCAGCGT...TCTCGCTGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAACGCTGAACCCTCTCTaGAACAGCCTTTCTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGTLNPL*NSLSRT Trigger: GGTCCTAGAAAGGCTGTTTCAGAGAGGGTTCAGCGT...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCATGGAAGCAGCAGTTTTaGCGTCCGCAGGAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVIYKSTGVIHKGVPARAWKQQF*RPQETQ Trigger: CTGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCA...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | GCACCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCACAGCTGGTAGTACCTTaGCTCCTCATACAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: APGKSSDGWSSLALPTCAQLVVP*LLIQQV Trigger: AACCTGCTGTATGAGGAGGCAAGGTACTACCAGCTG...TGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCCAGCTGGTAGTACCTTaGCTCCTCATACAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIYKSTGVIHKGVPARAPQLVVP*LLIQQV Trigger: AACCTGCTGTATGAGGAGGCAAGGTACTACCAGCTG...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | GTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGAGATGTGACAAGGTGGAAGCAGCAGTTTTaGCGTCCGCAGGAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSLRFLHLGGAKGDVTRWKQQF*RPQETQ Trigger: CTGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCA...CCTTGTCACATCTCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | GTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACCCAGCCTTTCTAGGACCTaGACTGAGTTGAGTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VIYKSTGVIHKGVPARAPSLSRT*TELSLQ Trigger: CTGTAGACTCAACTCAGTGCAGGTCCTAGAAAGGCT...GGGTGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| 3UTR CAA 72 bp | CCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTaGCCGACCTGTGCAGCGAGACAGTTAGTACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGKSSDGWSSLA*PTCAARQLVLF Trigger: AAACAGTACTAACTGTCTCGCTGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | AGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCCCCATTGCCCTCTTCCCTGGAAGCAGCAGTTTTaGCGTCCGCAGGAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSQIKVTESQSPHCPLPWKQQF*RPQETQ Trigger: CTGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCA...GGGAAGAGGGCAATGGGGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | AAAGGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGAGCCTTTCTAGGACCTaGACTGAGTTGAGTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGVIYKSTGVIHKGVPARSLSRT*TELSLQ Trigger: CTGTAGACTCAACTCAGTGCAGGTCCTAGAAAGGCT...CCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CCA 90 bp | CGCGGTGTGTTCACACAAACACAGAACAATTGTACATCAGCATCTTTACAATATGGCAGTGGGATCCCCTaGGCAGCCAGGGGAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: RGVFTQTQNNCTSASLQYGSGIP*AARGDT Trigger: TGTGTCTCCCCTGGCTGCCCAGGGGATCCCACTGCC...ATATTGTAAAGATGCTGATGTACAATTGTTCTGTGTTTGTGTGAACACACCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | CGCGGTGTGTTCACACAAACACAGAACAATTGTACATCAGCATCTTTACAATATAGGCGACCGGGTGAGTaGCAGCCGGGACATATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGVFTQTQNNCTSASLQYRRPGE*QPGHIS Trigger: GGAAATATGTCCCGGCTGTCACTCACCCGGTCGCCT...ATATTGTAAAGATGCTGATGTACAATTGTTCTGTGTTTGTGTGAACACACCGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR TCA 90 bp | CGCGGTGTGTTCACACAAACACAGAACAATTGTACATCAGCATCTTTACAATATACGCTGAACCCTCTCTaGAACAGCCTTTCTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RGVFTQTQNNCTSASLQYTLNPL*NSLSRT Trigger: GGTCCTAGAAAGGCTGTTTCAGAGAGGGTTCAGCGT...ATATTGTAAAGATGCTGATGTACAATTGTTCTGTGTTTGTGTGAACACACCGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR GCA 90 bp | CGCGGTGTGTTCACACAAACACAGAACAATTGTACATCAGCATCTTTACAATATAGCCTTTCTAGGACCTaGACTGAGTTGAGTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGVFTQTQNNCTSASLQYSLSRT*TELSLQ Trigger: CTGTAGACTCAACTCAGTGCAGGTCCTAGAAAGGCT...ATATTGTAAAGATGCTGATGTACAATTGTTCTGTGTTTGTGTGAACACACCGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 90 bp | GAGCTGAGCTGGCAGTGGGATCCCCGCCGTGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCTCGGCCGCTCCTTGCGGTGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELSWQWDPRRAAAAV*VKRGPARPLLAVRH Trigger: ATGCCTCACCGCAAGGAGCGGCCGAGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGCACGGCGGGGATCCCACTGCCAGCTCAGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206501.2 |
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| CDS GCA 90 bp | CAGCCGGGACATATTTCCTCCCTCCGCCGTGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCTCGGCCGCTCCTTGCGGTGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QPGHISSLRRAAAAV*VKRGPARPLLAVRH Trigger: ATGCCTCACCGCAAGGAGCGGCCGAGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGCACGGCGGAGGGAGGAAATATGTCCCGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CCA 90 bp | CGTACCACCAGGCAGTCGCAGGCCCGGCTGCGACGTCTTTGCTCTTaGTCTTGCTGCCAGCGCTCCAGCTCACGCACCATGGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTTRQSQARLRRLCS*SCCQRSSSRTMGCS Trigger: GCTGCAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGACTGCCTGGTGGTACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS TCA 90 bp | ACATGTGACCTCCCACATCGATGTGCACGGGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGATCCCCGCCGTGCCGCTGCTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TCDLPHRCARVRWLW*AELAVGSPPCRCCR Trigger: ACGGCAGCAGCGGCACGGCGGGGATCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATCGATGTGGGAGGTCACATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206501.2 |
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| CDS TCA 90 bp | ACATGTGACCTCCCACATCGATGTGCACGGGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGATCCCCTGGGCAGCCAGGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: TCDLPHRCARVRWLW*AELAVGSPGQPGET Trigger: TGTCTCCCCTGGCTGCCCAGGGGATCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATCGATGTGGGAGGTCACATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | CCACAGACCCAGCTCAGCAGGCACCTGGGCCCCGAATGCCGGCAGCCCATCCTTAGCAGGTTGAAGTCCTaGAAGTCATCTGGAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQTQLSRHLGPECRQPILSRLKS*KSSGSS Trigger: GCTGCTTCCAGATGACTTCAAGGACTTCAACCTGCT...AAGGATGGGCTGCCGGCATTCGGGGCCCAGGTGCCTGCTGAGCTGGGTCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | GGACTCTGTTCCACGTCCTGTAGCACCCGCCACCTCACATCTGTCCCCACAGACCCGGCTGCGACGTCTTaGCTCTTGGTCTTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLCSTSCSTRHLTSVPTDPAATS*LLVLLP Trigger: TGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGG...GTCTGTGGGGACAGATGTGAGGTGGCGGGTGCTACAGGACGTGGAACAGAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | AACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGCCGAGGACCGGCTGCGACGTCTTaGCTCTTGGTCTTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSCSGVTGPAEDAIPGRGPAATS*LLVLLP Trigger: TGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGG...TCCTCGGCCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 90 bp | AGTCTCCGGGAAGACCTCCTCAATGAGGGCCTTCTCACCACTGAGTaGGATCCGTTCACCCAAGTCAGGGGTGACCCGTACCACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLREDLLNEGLLTTE*DPFTQVRGDPYHQA Trigger: TGCCTGGTGGTACGGGTCACCCCTGACTTGGGTGAACGGATCGCACTCAGTGGTGAGAAGGCCCTCATTGAGGAGGTCTTCCCGGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | CTGCCAAGTGTGGAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGATCTTTGCTCTTGGTCTaGCTGCCAGCGCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVEEKQLLWSDWPSRGSLLLV*LPALQL Trigger: GAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGA...TCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTCCACACTTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR CAA 90 bp | GAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGTCTTTGCTCTTGGTCTaGCTGCCAGCGCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EEKQLLWSDWPSRGRYTRSLLLV*LPALQL Trigger: GAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGA...CCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
||
| CDS-3UTR CAA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGACCGGCTGCGACGTCTTaGCTCTTGGTCTTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGPAATS*LLVLLP Trigger: TGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGG...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 90 bp | CCAGCGCTCCAGCTCACGCACCATGGGCTGCAGCTGGTAGTACCTTaGCTCCTCATACAGCAGGTTGAAGTCCTTGAAGTCATCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PALQLTHHGLQLVVP*LLIQQVEVLEVIWK Trigger: CTTCCAGATGACTTCAAGGACTTCAACCTGCTGTATGAGGAGGCAAGGTACTACCAGCTGCAGCCCATGGTGCGTGAGCTGGAGCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | GAGGAGAAACAGCTGCTCTGGAGTGACTGGCCCAGCAGAGGACGCTATACCAGGCTGGAAGCAGCAGTTTaGACGTCCGCAGGAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: EEKQLLWSDWPSRGRYTRLEAAV*TSAGNS Trigger: TGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCAG...CCTGGTATAGCGTCCTCTGCTGGGCCAGTCACTCCAGAGCAGCTGTTTCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCATCTTTGCTCTTGGTCTaGCTGCCAGCGCTCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GVIYKSTGVIHKGVPARASLLLV*LPALQL Trigger: GAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGA...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | GCACCAGGTAAAAGCAGCGATGGATGGTCCTCCTTAGCCTTGCCGACCTGTGCATGGTTCCAGCCAGCATaGACAGAGTTGCACATGACG | + |
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Preference number: 5 (lower is better) Translates to: APGKSSDGWSSLALPTCAWFQPA*TELHMT Trigger: CGTCATGTGCAACTCTGTCAATGCTGGCTGGAACCA...TGCACAGGTCGGCAAGGCTAAGGAGGACCATCCATCGCTGCTTTTACCTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | ACAAACAGGCAGAACTCCTCAGCGCTATTTCCATGTCCCTGGGGTTGCCCCAGGTGGTTCCAGCCAGCATaGACAGAGTTGCACATGACG | + |
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Preference number: 5 (lower is better) Translates to: TNRQNSSALFPCPWGCPRWFQPA*TELHMT Trigger: CGTCATGTGCAACTCTGTCAATGCTGGCTGGAACCA...CCTGGGGCAACCCCAGGGACATGGAAATAGCGCTGAGGAGTTCTGCCTGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | GGAGTCATATACAAGTCTACAGGCGTTATACACAAGGGGGTGCCGGCCAGGGCACTGGAAGCAGCAGTTTaGACGTCCGCAGGAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: GVIYKSTGVIHKGVPARALEAAV*TSAGNS Trigger: TGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCAG...TGCCCTGGCCGGCACCCCCTTGTGTATAACGCCTGTAGACTTGTATATGACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | ACAAACAGGCAGAACTCCTCAGCGCTATTTCCATGTCCCTGGGGTTGCCCCAGGAGCAGGTTGAAGTCCTaGAAGTCATCTGGAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TNRQNSSALFPCPWGCPRSRLKS*KSSGSS Trigger: GCTGCTTCCAGATGACTTCAAGGACTTCAACCTGCT...CCTGGGGCAACCCCAGGGACATGGAAATAGCGCTGAGGAGTTCTGCCTGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | ACAAACAGGCAGAACTCCTCAGCGCTATTTCCATGTCCCTGGGGTTGCCCCAGGTCCTCATACAGCAGGTaGAAGTCCTTGAAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: TNRQNSSALFPCPWGCPRSSYSR*KSLKSS Trigger: AGATGACTTCAAGGACTTCAACCTGCTGTATGAGGA...CCTGGGGCAACCCCAGGGACATGGAAATAGCGCTGAGGAGTTCTGCCTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | GGCACCCCATCTGTCAGTTCTTTGCGGTTCCTCCACTTGGGAGGAGCTAAGGGATCCTCATACAGCAGGTaGAAGTCCTTGAAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: GTPSVSSLRFLHLGGAKGSSYSR*KSLKSS Trigger: AGATGACTTCAAGGACTTCAACCTGCTGTATGAGGA...TCCCTTAGCTCCTCCCAAGTGGAGGAACCGCAAAGAACTGACAGATGGGGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | AGAGTATCTCAGATAAAAGTCACAGAGTCACAAAGCCCCCATTGCCCTCTTCCCTGGTTCCAGCCAGCATaGACAGAGTTGCACATGACG | + |
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Preference number: 5 (lower is better) Translates to: RVSQIKVTESQSPHCPLPWFQPA*TELHMT Trigger: CGTCATGTGCAACTCTGTCAATGCTGGCTGGAACCA...GGGAAGAGGGCAATGGGGGCTTTGTGACTCTGTGACTTTTATCTGAGATACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCTTACAGACAGGCTAGTTTAGGACATTTCATTAACACTTGGTGTGCACTGGAAGCAGCAGTTTaGACGTCCGCAGGAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: SGSYRQASLGHFINTWCALEAAV*TSAGNS Trigger: TGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCAG...TGCACACCAAGTGTTAATGAAATGTCCTAAACTAGCCTGTCTGTAAGACCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS-3UTR CAA 90 bp | CGCGGTGTGTTCACACAAACACAGAACAATTGTACATCAGCATCTTTACAATATTCCTCATACAGCAGGTaGAAGTCCTTGAAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: RGVFTQTQNNCTSASLQYSSYSR*KSLKSS Trigger: AGATGACTTCAAGGACTTCAACCTGCTGTATGAGGA...ATATTGTAAAGATGCTGATGTACAATTGTTCTGTGTTTGTGTGAACACACCGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 72 bp | TGGCAGTGGGATCCCCGCCGTGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCTCGGCCGCTCCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: WQWDPRRAAAAV*VKRGPARPLLA Trigger: CGCAAGGAGCGGCCGAGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGCACGGCGGGGATCCCACTGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206501.2 |
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| CDS TCA 72 bp | CTGGGCAGCCAGGGGAGACACAGGCGACCGGGTGAGTaGCAGCCGGGACATATTTCCTCCCTCCGCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGSQGRHRRPGE*QPGHISSLRRA Trigger: GGCACGGCGGAGGGAGGAAATATGTCCCGGCTGTCACTCACCCGGTCGCCTGTGTCTCCCCTGGCTGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 72 bp | CATATTTCCTCCCTCCGCCGTGCCGCTGCTGCCGTGTaGGTTAAGCGAGGACCCGCTCGGCCGCTCCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: HISSLRRAAAAV*VKRGPARPLLA Trigger: CGCAAGGAGCGGCCGAGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGCACGGCGGAGGGAGGAAATATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CCA 72 bp | GATGTGCACGGGTGCGTTGGCTTTGGTGAGCTGAGCTaGCAGTGGGATCCCCGCCGTGCCGCTGCTGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: DVHGCVGFGELS*QWDPRRAAAAV Trigger: CACGGCAGCAGCGGCACGGCGGGGATCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206501.2 |
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| CDS CAA 90 bp | CCGTACCACCAGGCAGTCGCAGGCCCGGCTGCGACGTCTTTGCTCTaGGTCTTGCTGCCAGCGCTCCAGCTCACGCACCATGGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PYHQAVAGPAATSLL*VLLPALQLTHHGLQ Trigger: CTGCAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGACTGCCTGGTGGTACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS TCA 72 bp | CTCCCACATCGATGTGCACGGGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGATCCCCGCCGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LPHRCARVRWLW*AELAVGSPPCR Trigger: GCGGCACGGCGGGGATCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATCGATGTGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206501.2 |
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| CDS GCA 72 bp | CAGGCCCGGCTGCGACGTCTTTGCTCTTGGTCTTGCTaGCAGCGCTCCAGCTCACGCACCATGGGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QARLRRLCSWSC*QRSSSRTMGCS Trigger: GCTGCAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 72 bp | TCGCAGGCCCGGCTGCGACGTCTTTGCTCTTGGTCTTaGTGCCAGCGCTCCAGCTCACGCACCATGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SQARLRRLCSWS*CQRSSSRTMGC Trigger: GCAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 72 bp | ACCACCAGGCAGTCGCAGGCCCGGCTGCGACGTCTTTaGTCTTGGTCTTGCTGCCAGCGCTCCAGCTCACGC | + |
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Preference number: 6 (lower is better) Translates to: TTRQSQARLRRL*SWSCCQRSSSR Trigger: GCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGACTGCCTGGTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CAA 72 bp | GTCGCAGGCCCGGCTGCGACGTCTTTGCTCTTGGTCTaGCTGCCAGCGCTCCAGCTCACGCACCATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAGPAATSLLLV*LPALQLTHHGL Trigger: CAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CAA 90 bp | CACCAGGCAGTCGCAGGCCCGGCTGCGACGTCTTTGCTCTTGGTCTaGCTGCCAGCGCTCCAGCTCACGCACCATGGGCTGCAGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: HQAVAGPAATSLLLV*LPALQLTHHGLQLV Trigger: TACCAGCTGCAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGACTGCCTGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS TCA 72 bp | ACATCGATGTGCACGGGTGCGTTGGCTTTGGTGAGCTaGGCTGGCAGTGGGATCCCCGCCGTGCCGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSMCTGALALVS*AGSGIPAVPLL Trigger: CAGCAGCGGCACGGCGGGGATCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATCGATGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206501.2 |
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| CDS CCA 72 bp | AGGCAGTCGCAGGCCCGGCTGCGACGTCTTTGCTCTTaGTCTTGCTGCCAGCGCTCCAGCTCACGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: RQSQARLRRLCS*SCCQRSSSRTM Trigger: CATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGACTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CAA 72 bp | CAGGCAGTCGCAGGCCCGGCTGCGACGTCTTTGCTCTaGGTCTTGCTGCCAGCGCTCCAGCTCACGCACCAT | + |
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Preference number: 6 (lower is better) Translates to: QAVAGPAATSLL*VLLPALQLTHH Trigger: ATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCCGGGCCTGCGACTGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS TCA 72 bp | CTCCCACATCGATGTGCACGGGTGCGTTGGCTTTGGTaGGCTGAGCTGGCAGTGGGATCCCCTGGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LPHRCARVRWLW*AELAVGSPGQP Trigger: TGGCTGCCCAGGGGATCCCACTGCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATCGATGTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS TCA 72 bp | AAGAGTCCACACCACCCCCGCAGGATGCGGCCACGCTaGACCCTCTCTGAAACAGCCTTTCTAGGACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KSPHHPRRMRPR*TLSETAFLGPA Trigger: TGCAGGTCCTAGAAAGGCTGTTTCAGAGAGGGTTCAGCGTGGCCGCATCCTGCGGGGGTGGTGTGGACTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CAA 72 bp | CGGATGACGTGTGTGGGGTCCTGGTTCCAGCCAGCATaGACAGAGTTGCACATGACGTCTCCAGTCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RMTCVGSWFQPA*TELHMTSPVSG Trigger: CCCGGAGACTGGAGACGTCATGTGCAACTCTGTCAATGCTGGCTGGAACCAGGACCCCACACACGTCATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CAA 90 bp | AGAGGGAAACGGATGACGTGTGTGGGGTCCTGGTTCCAGCCAGCATaGACAGAGTTGCACATGACGTCTCCAGTCTCCGGGAAGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RGKRMTCVGSWFQPA*TELHMTSPVSGKTS Trigger: GGAGGTCTTCCCGGAGACTGGAGACGTCATGTGCAACTCTGTCAATGCTGGCTGGAACCAGGACCCCACACACGTCATCCGTTTCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 72 bp | GAAGACCTCCTCAATGAGGGCCTTCTCACCACTGAGTaGGATCCGTTCACCCAAGTCAGGGGTGACCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: EDLLNEGLLTTE*DPFTQVRGDPY Trigger: GTACGGGTCACCCCTGACTTGGGTGAACGGATCGCACTCAGTGGTGAGAAGGCCCTCATTGAGGAGGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS CCA 72 bp | CTCCTGCTTTATCCGGACAGCAGTTGGGGTAGGCTGTaGTCGCCGCTCTTCCCGGCAAAGAACATATTCGCT | + |
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Preference number: 6 (lower is better) Translates to: LLLYPDSSWGRL*SPLFPAKNIFA Trigger: AGCGAATATGTTCTTTGCCGGGAAGAGCGGCGACCACAGCCTACCCCAACTGCTGTCCGGATAAAGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS GCA 72 bp | CAGCTCACGCACCATGGGCTGCAGCTGGTAGTACCTTaGCTCCTCATACAGCAGGTTGAAGTCCTTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QLTHHGLQLVVP*LLIQQVEVLEV Trigger: GACTTCAAGGACTTCAACCTGCTGTATGAGGAGGCAAGGTACTACCAGCTGCAGCCCATGGTGCGTGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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| CDS TCA 72 bp | GTTGAAGTCCTTGAAGTCATCTGGAAGCAGCAGTTTTaGCGTCCGCAGGAAACTCAGTATGTAGCGGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: VEVLEVIWKQQF*RPQETQYVAEN Trigger: ATTTTCCGCTACATACTGAGTTTCCTGCGGACGTCAAAACTGCTGCTTCCAGATGACTTCAAGGACTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032709.3 ENSMUST00000108069.8 ENSMUST00000108070.9 |
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