Pregenerated sensors for KCTD14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051727Ensembl transcript IDs: ENSMUST00000050732.14, ENSMUST00000121987.3, ENSMUST00000143321.3, ENSMUST00000205577.2, ENSMUST00000206279.2, ENSMUST00000206658.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCGCATCCTCCTCCTCCGTGCGCACCACACACACCACCACCTTTaGCGACCGCATCGCCACAGCCTCTGCCCGAGCCAGGTGCAACAG | + |
|
Preference number: 1 (lower is better) Translates to: LRILLLRAHHTHHHL*RPHRHSLCPSQVQQ Trigger: CTGTTGCACCTGGCTCGGGCAGAGGCTGTGGCGATGCGGTCGTCAAAGGTGGTGGTGTGTGTGGTGCGCACGGAGGAGGAGGATGCGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR GCA 90 bp | AATGTCCTTCTCCAGGCAGCATACAAAGTCCTCCGTCATAGGGCCTaGCTTCCAGGGCCCGAATTTGACAACCGGTGTCTTTTTGGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: NVLLQAAYKVLRHRA*LPGPEFDNRCLFGL Trigger: GAGGCCAAAAAGACACCGGTTGTCAAATTCGGGCCCTGGAAGGCAGGCCCTATGACGGAGGACTTTGTATGCTGCCTGGAGAAGGACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR CCA 90 bp | AATAGGGTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATaGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACA | + |
|
Preference number: 1 (lower is better) Translates to: NRVLVYTRNWPPASS*QSSCLLGLPSSGTT Trigger: TGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CCA 90 bp | AGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTTaGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: SRHGDRVAWAISIGF*SILETGLQLAHGSL Trigger: AAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 90 bp | ACTTCGCATCCTCCTCCTCCGTGCGCACCACACACACCACCACCTTaGACGACCGCATCGCCACAGCCTCTGCCCGAGCCAGGTGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: TSHPPPPCAPHTPPP*TTASPQPLPEPGAT Trigger: TGTTGCACCTGGCTCGGGCAGAGGCTGTGGCGATGCGGTCGTCAAAGGTGGTGGTGTGTGTGGTGCGCACGGAGGAGGAGGATGCGAAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCCTCCAAGATGTGCAGCGGCTCCACACACTTCGCATCCTCCTCCTCCGTGCATCGCCACAGCCTCTaGCCGAGCCAGGTGCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: LASKMCSGSTHFASSSSVHRHSL*PSQVQQ Trigger: CTGTTGCACCTGGCTCGGGCAGAGGCTGTGGCGATG...CACGGAGGAGGAGGATGCGAAGTGTGTGGAGCCGCTGCACATCTTGGAGGCCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGAAGGGAGCAGACATaGAGACAGGGTAGCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LMAVFLSPRPSKLWDYRLRREQT*RQGSLG Trigger: GCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCT...GAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCCTCTGCCCGAGCCAGGTGCAACAGGACCTCCAGGTTTTCTCTGTAGTTAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: HSLCPSQVQQDLQVFSVVKSACL*LPSAEI Trigger: AATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTT...AACTACAGAGAAAACCTGGAGGTCCTGTTGCACCTGGCTCGGGCAGAGGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAGAACATGGAATTCAGGAACGTACTCTGTaGGCACCTGCCCAGTGCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLGLPSSGTTGSALEHGIQERTL*APAQCA Trigger: TGCGCACTGGGCAGGTGCCCACAGAGTACGTTCCTG...AATTCCATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTTCCAGAAGGGAGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGCCTCCAGCTAGCTCATaGCAGTCTTCTTGTCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSRREQTWRQGSLGHFNRPPASS*QSSCLL Trigger: GAGGAGACAAGAAGACTGCCATGAGCTAGCTGGAGG...CCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCTGGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGATGTGCAGCGGCTCCACACACTTCGCATCCTCCTCCTCCGTGCGCACCACCTCACCGAAGATCTGTaGCATGTCTTCCAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: QDVQRLHTLRILLLRAHHLTEDL*HVFQNL Trigger: AAGATTTTGGAAGACATGCCACAGATCTTCGGTGAG...GTGGTGCGCACGGAGGAGGAGGATGCGAAGTGTGTGGAGCCGCTGCACATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: QSSCLLGLPSSGTTGSALKSACL*LPSAEI Trigger: AATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTT...TAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCCTTCCAGGGCCCGAATTTGACAACCGGTGTCTTTTTGGCCTCCAAGATGAACTTTGAGCCTGGATaGTTCATCAGGGTGCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: PAFQGPNLTTGVFLASKMNFEPG*FIRVPM Trigger: CATGGGCACCCTGATGAAGCATCCAGGCTCAAAGTT...CATCTTGGAGGCCAAAAAGACACCGGTTGTCAAATTCGGGCCCTGGAAGGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGAACTGCGTTCGAGCCACTTGCTCACCGAAGATCTGTGGCATGTCTTCCAAAAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: RNCVRATCSPKICGMSSKKSACL*LPSAEI Trigger: AATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTT...TTTGGAAGACATGCCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAGTTCCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR CAA 90 bp | GAGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTaGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: EQTWRQGSLGHFNRV*VYTRNWPPASSWQS Trigger: AGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCAGGTTTTCTCTGTAGTTTGGCACTCCCATTAGGAACTGCGTTCGAGCCAAACTTTGAGCCTGGATaGTTCATCAGGGTGCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: PPGFLCSLALPLGTAFEPNFEPG*FIRVPM Trigger: CATGGGCACCCTGATGAAGCATCCAGGCTCAAAGTT...TGGCTCGAACGCAGTTCCTAATGGGAGTGCCAAACTACAGAGAAAACCTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTCATAGGGCCTGCCTTCCAGGGCCCGAATTTGACAACCGGTGTCTTTTTGGCTGTCTTCCAAAATCTTaGCCAAAAGGTGGATTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RHRACLPGPEFDNRCLFGCLPKS*PKGGFG Trigger: ACCAAATCCACCTTTTGGTCAAGATTTTGGAAGACA...GCCAAAAAGACACCGGTTGTCAAATTCGGGCCCTGGAAGGCAGGCCCTATGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAGAACATGGAATTGAGCTCACCACCAAGTaGAGACAAATATCCAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLGLPSSGTTGSALEHGIELTTK*RQISRS Trigger: GCTTCTGGATATTTGTCTTCACTTGGTGGTGAGCTC...AATTCCATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTTCTTGTAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: VLVYTRNWPPASSWQSSCKSACL*LPSAEI Trigger: AATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTT...ACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 90 bp | TTCCAAAATCTTGACCAAAAGGTGGATTTGGTAGAACTTAGCTTCTaGGTATACCTCAGGAACGTACTCTGTGGGCACCTGCCCAGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: FQNLDQKVDLVELSF*VYLRNVLCGHLPSA Trigger: CGCACTGGGCAGGTGCCCACAGAGTACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTACCAAATCCACCTTTTGGTCAAGATTTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: TRSRLEEVIKTETMTLGPKSACL*LPSAEI Trigger: AATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTT...TGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCCAGAAGGGAGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGCTATTTCTTAGAAGATaGGAGAAACCCTACTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GSRREQTWRQGSLGHFNRLFLRR*EKPYFV Trigger: GACAAAGTAGGGTTTCTCGCATCTTCTAAGAAATAG...CCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCTGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATAGCACTAGGTCCACATTCAAGCACTTCTTaGGCAGGGAAGACGGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: TRSRLEEVIKTETIALGPHSSTS*AGKTEH Trigger: GTGTTCCGTCTTCCCTGCTCAAGAAGTGCTTGAATG...TGGACCTAGTGCTATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTTATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGAGAAGGGAGCAGACATaGAGACAGGGTAGCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GYKDRKHDTRSRLEEVIKRREQT*RQGSLG Trigger: GCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCT...CTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAAACAGTCCCCACTCCTaGAGCTCACCACCAAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: HDTRSRLEEVIKTETMTLNSPHS*SSPPSE Trigger: TTCACTTGGTGGTGAGCTCCAGGAGTGGGGACTGTT...TAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCTGCTAAGCATCTTACAAGCTCTATTTCTTAGAAGATGCGAGAAACCCTACCCTCCAGCTAGCTCATaGCAGTCTTCTTGTCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: DLLSILQALFLRRCEKPYPPASS*QSSCLL Trigger: GAGGAGACAAGAAGACTGCCATGAGCTAGCTGGAGG...GTAGGGTTTCTCGCATCTTCTAAGAAATAGAGCTTGTAAGATGCTTAGCAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 90 bp | GCATCTTACAAGCTCTATTTCTTAGAAGATGCGAGAAACCCTACTTaGTCAAGTAGGTTGTGGTTCCAGAAGGGAGCAGACATGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: ASYKLYFLEDARNPT*SSRLWFQKGADMET Trigger: TGTCTCCATGTCTGCTCCCTTCTGGAACCACAACCTACTTGACAAAGTAGGGTTTCTCGCATCTTCTAAGAAATAGAGCTTGTAAGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGCCTCCAGCTAGCTCATaGCAGTCTTCTTGTCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GYKDRKHDTRSRLEEVIKPPASS*QSSCLL Trigger: GAGGAGACAAGAAGACTGCCATGAGCTAGCTGGAGG...CTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTTCTTGTCTCACCGAAGATCTGTaGCATGTCTTCCAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: VLVYTRNWPPASSWQSSCLTEDL*HVFQNL Trigger: AAGATTTTGGAAGACATGCCACAGATCTTCGGTGAG...ACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR CAA 90 bp | GAAGATCTGTGGCATGTCTTCCAAAATCTTGACCAAAAGGTGGATTaGGTAGAACTTAGCTTCTTGGTATACCTCAGGAACGTACTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: EDLWHVFQNLDQKVD*VELSFLVYLRNVLC Trigger: ACAGAGTACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTACCAAATCCACCTTTTGGTCAAGATTTTGGAAGACATGCCACAGATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGCTATTTCTTAGAAGATaGGAGAAACCCTACTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ARRGYKDRNHDTRSRLEELFLRR*EKPYFV Trigger: GACAAAGTAGGGTTTCTCGCATCTTCTAAGAAATAG...CTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTAGAAGAGGTTATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAACTATTTCTTAGAAGATaGGAGAAACCCTACTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QARRGYKDRKHDTRSRLELFLRR*EKPYFV Trigger: GACAAAGTAGGGTTTCTCGCATCTTCTAAGAAATAG...TTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATAACCTCTTCTAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACACTATTTCTTAGAAGATaGGAGAAACCCTACTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: YKDRKHDTRSRLEEVIKTLFLRR*EKPYFV Trigger: GACAAAGTAGGGTTTCTCGCATCTTCTAAGAAATAG...TGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR TCA 72 bp | CTCCTCCTCCGTGCGCACCACACACACCACCACCTTTaGCGACCGCATCGCCACAGCCTCTGCCCGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLRAHHTHHHL*RPHRHSLCPSQ Trigger: CTGGCTCGGGCAGAGGCTGTGGCGATGCGGTCGTCAAAGGTGGTGGTGTGTGTGGTGCGCACGGAGGAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCAACCTCAGAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGAGATTAAAGGCTTGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPQPQKSACL*LPSAEIKGLSH Trigger: GTGGCTCAAGCCTTTAATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGGTTGAGGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050732.14 ENSMUST00000121987.3 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCCTCATGGCAGTCTTCTaGTCTCCTCGGCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LMAVFLSPRPSKLWDYRLLMAVF*SPRPSK Trigger: CTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG...GAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAGAACATGGAATTCTCATGGCAGTCTTCTaGTCTCCTCGGCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLGLPSSGTTGSALEHGILMAVF*SPRPSK Trigger: CTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG...AATTCCATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCTCATTCAAGCACTTCTaGAGCAGGGAAGACGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: LMAVFLSPRPSKLWDYRLSFKHF*SREDGT Trigger: TGTTCCGTCTTCCCTGCTCAAGAAGTGCTTGAATGA...GAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR CAA 90 bp | CACGGATTTTCATGGCAACGGATTTCACAAGTCCCACCACAGCCTCTAACAAACCTCATGGCAGTCTTCTaGTCTCCTCGGCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HGFSWQRISQVPPQPLTNLMAVF*SPRPSK Trigger: CTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG...GTTTGTTAGAGGCTGTGGTGGGACTTGTGAAATCCGTTGCCATGAAAATCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR TCA 72 bp | CAACCTTGGCGTCTAGCTCAGTGCTGGCTCCATAGATaGCCTTTGCCCAGGAACTCATTCAAGCACTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QPWRLAQCWLHR*PLPRNSFKHFL Trigger: CAAGAAGTGCTTGAATGAGTTCCTGGGCAAAGGTCATCTATGGAGCCAGCACTGAGCTAGACGCCAAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR CCA 72 bp | TTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATaGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVYTRNWPPASS*QSSCLLGLPSS Trigger: AGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CCA 72 bp | TGTCAAGTAGGTTGTGGTTCCAGAAGGGAGCAGACATaGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CQVGCGSRREQT*RQGSLGHFNRV Trigger: AACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCTGGAACCACAACCTACTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CCA 72 bp | GTCCCACCACAGCCTCTAACAAACAGTCCCCACTCCTaGAGCTCACCACCAAGTGAAGACAAATATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPPQPLTNSPHS*SSPPSEDKYPE Trigger: TTCTGGATATTTGTCTTCACTTGGTGGTGAGCTCCAGGAGTGGGGACTGTTTGTTAGAGGCTGTGGTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTTCCAGGGCCCGAATTTGACAACCGGTGTCTTTTTGGCCTCCAAGATGGTAGAACTTAGCTTCTaGGTATACCTCAGGAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAFQGPNLTTGVFLASKMVELSF*VYLRNV Trigger: TACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTAC...CATCTTGGAGGCCAAAAAGACACCGGTTGTCAAATTCGGGCCCTGGAAGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATAGCACTAGGTCCACTGCGTTCGAGCCACTaGCTCACCGAAGATCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TRSRLEEVIKTETIALGPLRSSH*LTEDLW Trigger: CCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAG...TGGACCTAGTGCTATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR GCA 72 bp | TTTGGCACTCCCATTAGGAACTGCGTTCGAGCCACTTaGTCACCGAAGATCTGTGGCATGTCTTCCAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: FGTPIRNCVRAT*SPKICGMSSKI Trigger: GATTTTGGAAGACATGCCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAGTTCCTAATGGGAGTGCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR CCA 72 bp | ATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTaGGACTACAGGCTCAGCTTTAGAACATGGAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: MAVFLSPRPSKL*DYRLSFRTWNF Trigger: GAAATTCCATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CCA 72 bp | GGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTTaGTCTATACTAGAAACTGGCCTCCAGCTAGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GDRVAWAISIGF*SILETGLQLAH Trigger: ATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTACTCATGGCAGTCTTCTaGTCTCCTCGGCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HDTRSRLEEVIKTETMTLLMAVF*SPRPSK Trigger: CTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG...TAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGCTAAGCATCTTACAAGCTCTATTTCTTAGAAGATGCGAGAAACCCTACCTCATGGCAGTCTTCTaGTCTCCTCGGCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLLSILQALFLRRCEKPYLMAVF*SPRPSK Trigger: CTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG...GTAGGGTTTCTCGCATCTTCTAAGAAATAGAGCTTGTAAGATGCTTAGCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTTGGTCTATACTAGAAACTACTTTGTCAAGTAGGTaGTGGTTCCAGAAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GDRVAWAISIGFWSILETTLSSR*WFQKGA Trigger: TGCTCCCTTCTGGAACCACAACCTACTTGACAAAGT...AGTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAGGTTTTCTCTGTAGTTTGGCACTCCCATTAGGAACTGCGTTCGAGCCAATGTCTTCCAAAATCTaGACCAAAAGGTGGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PPGFLCSLALPLGTAFEPMSSKI*TKRWIW Trigger: CCAAATCCACCTTTTGGTCAAGATTTTGGAAGACAT...TGGCTCGAACGCAGTTCCTAATGGGAGTGCCAAACTACAGAGAAAACCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR CCA 72 bp | GGCCATTTCAATAGGGTTTTGGTCTATACTAGAAACTaGCCTCCAGCTAGCTCATGGCAGTCTTCTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GHFNRVLVYTRN*PPASSWQSSCL Trigger: GAGACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATTGAAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCACTTTGTCAAGTAGGTaGTGGTTCCAGAAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DRNHDTRSRLEEVIKTETTLSSR*WFQKGA Trigger: TGCTCCCTTCTGGAACCACAACCTACTTGACAAAGT...GGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGACTTTGTCAAGTAGGTaGTGGTTCCAGAAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ARRGYKDRNHDTRSRLEETLSSR*WFQKGA Trigger: TGCTCCCTTCTGGAACCACAACCTACTTGACAAAGT...CTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGGTTACTTTGTCAAGTAGGTaGTGGTTCCAGAAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RRGYKDRNHDTRSRLEEVTLSSR*WFQKGA Trigger: TGCTCCCTTCTGGAACCACAACCTACTTGACAAAGT...AACCTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTTGGTCTATACTAGAAACGTAGAACTTAGCTTCTaGGTATACCTCAGGAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: WRQGSLGHFNRVLVYTRNVELSF*VYLRNV Trigger: TACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTAC...GTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGGTGGATTTGGTAGAACTTAGCTTCTTGGTATACCTCAGGAACGTACTCGTATCTCTGAAAACTTaGAGCCTGGATGCTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QKVDLVELSFLVYLRNVLVSLKT*SLDASS Trigger: TGATGAAGCATCCAGGCTCAAAGTTTTCAGAGATAC...GAGTACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTACCAAATCCACCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGTATCTCTGAAAACTTaGAGCCTGGATGCTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: HDTRSRLEEVIKTETMTLVSLKT*SLDASS Trigger: TGATGAAGCATCCAGGCTCAAAGTTTTCAGAGATAC...TAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143321.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAACTTTGTCAAGTAGGTaGTGGTTCCAGAAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YKDRKHDTRSRLEEVIKTTLSSR*WFQKGA Trigger: TGCTCCCTTCTGGAACCACAACCTACTTGACAAAGT...TGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 72 bp | CCTCCTCCTCCGTGCGCACCACACACACCACCACCTTaGACGACCGCATCGCCACAGCCTCTGCCCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPPCAPHTPPP*TTASPQPLPEP Trigger: TGGCTCGGGCAGAGGCTGTGGCGATGCGGTCGTCAAAGGTGGTGGTGTGTGTGGTGCGCACGGAGGAGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| CDS-3UTR CCA 90 bp | CTCATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCCAGGAACGTACTCTGTaGGCACCTGCCCAGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMAVFLSPRPSKLWDYRLQERTL*APAQCA Trigger: TGCGCACTGGGCAGGTGCCCACAGAGTACGTTCCTG...GAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGGGAGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTCATCGCCACAGCCTCTaGCCGAGCCAGGTGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEGSRHGDRVAWAISIGFHRHSL*PSQVQQ Trigger: CTGTTGCACCTGGCTCGGGCAGAGGCTGTGGCGATG...AAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGCCTTCCAGGGCCCGAATTTGACAACCGGTGTCTTTTTGGCCTCCAAGATACAGGCAGAGCCTCCTaGCTGGGTTCCTTGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ACLPGPEFDNRCLFGLQDTGRAS*LGSLSD Trigger: ATCGCTCAAGGAACCCAGTCAGGAGGCTCTGCCTGT...ATCTTGGAGGCCAAAAAGACACCGGTTGTCAAATTCGGGCCCTGGAAGGCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTACCGGGCTCCTTGATCTaGTTTGCGGGCAGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QSSCLLGLPSSGTTGSALPGSLI*FAGRLI Trigger: GATGAGCCTGCCCGCAAACCAGATCAAGGAGCCCGG...TAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206658.2 |
||
| 3UTR CAA 72 bp | GCCTTCCAGGGCCCGAATTTGACAACCGGTGTCTTTTaGGCCTCCAAGATGTGCAGCGGCTCCACACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFQGPNLTTGVF*ASKMCSGSTHF Trigger: GAAGTGTGTGGAGCCGCTGCACATCTTGGAGGCCAAAAAGACACCGGTTGTCAAATTCGGGCCCTGGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| CDS-3UTR GCA 90 bp | CTCATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAACTTTGAGCCTGGATaGTTCATCAGGGTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LMAVFLSPRPSKLWDYRLNFEPG*FIRVPM Trigger: CATGGGCACCCTGATGAAGCATCCAGGCTCAAAGTT...GAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGAAACCCTACTTTGTCAAGTAGGTTGTGGTTCCAGAAGGGAGCAGACATGCAGGAACGTACTCTGTaGGCACCTGCCCAGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARNPTLSSRLWFQKGADMQERTL*APAQCA Trigger: TGCGCACTGGGCAGGTGCCCACAGAGTACGTTCCTG...CATGTCTGCTCCCTTCTGGAACCACAACCTACTTGACAAAGTAGGGTTTCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGAGATTAAAGGCTTGAGCCACAACTTTGAGCCTGGATaGTTCATCAGGGTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QKSACLCLPSAEIKGLSHNFEPG*FIRVPM Trigger: CATGGGCACCCTGATGAAGCATCCAGGCTCAAAGTT...GTGGCTCAAGCCTTTAATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 72 bp | CCAGGTGCAACAGGACCTCCAGGTTTTCTCTGTAGTTaGGCACTCCCATTAGGAACTGCGTTCGAGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PGATGPPGFLCS*ALPLGTAFEPL Trigger: AAGTGGCTCGAACGCAGTTCCTAATGGGAGTGCCAAACTACAGAGAAAACCTGGAGGTCCTGTTGCACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAAACTTTGAGCCTGGATaGTTCATCAGGGTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QSSCLLGLPSSGTTGSALNFEPG*FIRVPM Trigger: CATGGGCACCCTGATGAAGCATCCAGGCTCAAAGTT...TAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGGTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTCAGGAACGTACTCTGTaGGCACCTGCCCAGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVLVYTRNWPPASSWQSQERTL*APAQCA Trigger: TGCGCACTGGGCAGGTGCCCACAGAGTACGTTCCTG...AGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR TCA 90 bp | AGGAACTGCGTTCGAGCCACTTGCTCACCGAAGATCTGTGGCATGTCTTCCAAACATTCAAGCACTTCTTaGGCAGGGAAGACGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RNCVRATCSPKICGMSSKHSSTS*AGKTEH Trigger: GTGTTCCGTCTTCCCTGCTCAAGAAGTGCTTGAATG...TTTGGAAGACATGCCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121987.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAAGGGAGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGCTCACCGAAGATCTGTaGCATGTCTTCCAAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRREQTWRQGSLGHFNRLTEDL*HVFQNL Trigger: AAGATTTTGGAAGACATGCCACAGATCTTCGGTGAG...CCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCTGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGGCCAACCGGTGTCTTTTTaGCCTCCAAGATGTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSRLEEVIKTETMTLGPGQPVSF*PPRCAA Trigger: CGCTGCACATCTTGGAGGCCAAAAAGACACCGGTTG...GCCTGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTTCTTCAACCGGTGTCTTTTTaGCCTCCAAGATGTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFWSILETGLQLAHGSLLQPVSF*PPRCAA Trigger: CGCTGCACATCTTGGAGGCCAAAAAGACACCGGTTG...AAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 72 bp | TGGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTaGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WRQGSLGHFNRV*VYTRNWPPASS Trigger: TGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTTCTTGTCAACCGGTGTCTTTTTaGCCTCCAAGATGTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLVYTRNWPPASSWQSSCQPVSF*PPRCAA Trigger: CGCTGCACATCTTGGAGGCCAAAAAGACACCGGTTG...ACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 72 bp | TTAGAAGATGCGAGAAACCCTACTTTGTCAAGTAGGTaGTGGTTCCAGAAGGGAGCAGACATGGAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEDARNPTLSSR*WFQKGADMETG Trigger: CCCTGTCTCCATGTCTGCTCCCTTCTGGAACCACAACCTACTTGACAAAGTAGGGTTTCTCGCATCTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050732.14 ENSMUST00000143321.3 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTATGTCTTCCAAAATCTTaGCCAAAAGGTGGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSCLLGLPSSGTTGSALCLPKS*PKGGFG Trigger: ACCAAATCCACCTTTTGGTCAAGATTTTGGAAGACA...TAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGACAGGGTAGCCTGGGCCATTTCAATAGGGTTTTGGTCTATACTAGAAACAACTTTGAGCCTGGATaGTTCATCAGGGTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WRQGSLGHFNRVLVYTRNNFEPG*FIRVPM Trigger: CATGGGCACCCTGATGAAGCATCCAGGCTCAAAGTT...GTTTCTAGTATAGACCAAAACCCTATTGAAATGGCCCAGGCTACCCTGTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| 3UTR CAA 72 bp | CTTGACCAAAAGGTGGATTTGGTAGAACTTAGCTTCTaGGTATACCTCAGGAACGTACTCTGTGGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDQKVDLVELSF*VYLRNVLCGHL Trigger: CAGGTGCCCACAGAGTACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTACCAAATCCACCTTTTGGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 |
||
| CDS-3UTR CCA 90 bp | TATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACACAACCGGTGTCTTTTTaGCCTCCAAGATGTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YKDRKHDTRSRLEEVIKTQPVSF*PPRCAA Trigger: CGCTGCACATCTTGGAGGCCAAAAAGACACCGGTTG...TGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR TCA 90 bp | GACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCTGTCTTCCAAAATCTTaGCCAAAAGGTGGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DRNHDTRSRLEEVIKTETCLPKS*PKGGFG Trigger: ACCAAATCCACCTTTTGGTCAAGATTTTGGAAGACA...GGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGTGTCTTCCAAAATCTTaGCCAAAAGGTGGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARRGYKDRNHDTRSRLEECLPKS*PKGGFG Trigger: ACCAAATCCACCTTTTGGTCAAGATTTTGGAAGACA...CTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTAGAAGAGGTTATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAATGTCTTCCAAAATCTTaGCCAAAAGGTGGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QARRGYKDRKHDTRSRLECLPKS*PKGGFG Trigger: ACCAAATCCACCTTTTGGTCAAGATTTTGGAAGACA...TTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATAACCTCTTCTAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | CTCATGGCAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCACAACCGGTGTCTTTTaGGCCTCCAAGATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMAVFLSPRPSKLWDYRLTTGVF*ASKMCS Trigger: GCTGCACATCTTGGAGGCCAAAAAGACACCGGTTGT...GAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTGCCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCCAGAAGGGAGCAGACATGGAGACAGGGTAGCCTGGGCCATTTCAATAGGACAACCGGTGTCTTTTaGGCCTCCAAGATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRREQTWRQGSLGHFNRTTGVF*ASKMCS Trigger: GCTGCACATCTTGGAGGCCAAAAAGACACCGGTTGT...CCTATTGAAATGGCCCAGGCTACCCTGTCTCCATGTCTGCTCCCTTCTGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | GTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTTCTTGTCTCCTCCTGCGTTCGAGCCACTaGCTCACCGAAGATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VYTRNWPPASSWQSSCLLLRSSH*LTEDLW Trigger: CCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAG...GAGGAGACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGAAACCCTACTTTGTCAAGTAGGTTGTGGTTCCAGAAGGGAGCAGACATGACAACCGGTGTCTTTTaGGCCTCCAAGATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARNPTLSSRLWFQKGADMTTGVF*ASKMCS Trigger: GCTGCACATCTTGGAGGCCAAAAAGACACCGGTTGT...CATGTCTGCTCCCTTCTGGAACCACAACCTACTTGACAAAGTAGGGTTTCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | CATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTACTGCGTTCGAGCCACTaGCTCACCGAAGATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HDTRSRLEEVIKTETMTLLRSSH*LTEDLW Trigger: CCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAG...TAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | AACTGCGTTCGAGCCACTTGCTCACCGAAGATCTGTGGCATGTCTTCCAAAATCTCATTCAAGCACTTCTaGAGCAGGGAAGACGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: NCVRATCSPKICGMSSKISFKHF*SREDGT Trigger: TGTTCCGTCTTCCCTGCTCAAGAAGTGCTTGAATGA...GATTTTGGAAGACATGCCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121987.3 |
||
| CDS-3UTR CAA 90 bp | TCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAGAACATGTATCTCTGAAAACTTaGAGCCTGGATGCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLLGLPSSGTTGSALEHVSLKT*SLDASS Trigger: TGATGAAGCATCCAGGCTCAAAGTTTTCAGAGATAC...ATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCTTCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAATGTCTTCCAAAATCTaGACCAAAAGGTGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSCLLGLPSSGTTGSALMSSKI*TKRWIW Trigger: CCAAATCCACCTTTTGGTCAAGATTTTGGAAGACAT...TAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGAAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTCTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAGAACATATGTCTTCCAAAATCTaGACCAAAAGGTGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCLLGLPSSGTTGSALEHMSSKI*TKRWIW Trigger: CCAAATCCACCTTTTGGTCAAGATTTTGGAAGACAT...ATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAGACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCGGCCTTCCAAGCTCTGGGACTACAGGCTCAGCTTTAGAACATGGAATTATGTCTTCCAAAATCTaGACCAAAAGGTGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGLPSSGTTGSALEHGIMSSKI*TKRWIW Trigger: CCAAATCCACCTTTTGGTCAAGATTTTGGAAGACAT...AATTCCATGTTCTAAAGCTGAGCCTGTAGTCCCAGAGCTTGGAAGGCCGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | GGTTATAAAGACAGAAAACATGACACTAGGTCCAGGCTAGAAGAGGTTATAAAGCTGCGTTCGAGCCACTaGCTCACCGAAGATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYKDRKHDTRSRLEEVIKLRSSH*LTEDLW Trigger: CCACAGATCTTCGGTGAGCAAGTGGCTCGAACGCAG...CTTTATAACCTCTTCTAGCCTGGACCTAGTGTCATGTTTTCTGTCTTTATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | CACGGATTTTCATGGCAACGGATTTCACAAGTCCCACCACAGCCTCTAACAAACGTATCTCTGAAAACTTaGAGCCTGGATGCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HGFSWQRISQVPPQPLTNVSLKT*SLDASS Trigger: TGATGAAGCATCCAGGCTCAAAGTTTTCAGAGATAC...GTTTGTTAGAGGCTGTGGTGGGACTTGTGAAATCCGTTGCCATGAAAATCCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTGGTCTATACTAGAAACTGGCCTCCAGCTAGCTCATGGCAGTCTTCTTGTGTAGAACTTAGCTTCTaGGTATACCTCAGGAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLVYTRNWPPASSWQSSCVELSF*VYLRNV Trigger: TACGTTCCTGAGGTATACCAAGAAGCTAAGTTCTAC...ACAAGAAGACTGCCATGAGCTAGCTGGAGGCCAGTTTCTAGTATAGACCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGGTCCAGGCTAGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGTATCTCTGAAAACTTaGAGCCTGGATGCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TRSRLEEVIKTETMTLGPVSLKT*SLDASS Trigger: TGATGAAGCATCCAGGCTCAAAGTTTTCAGAGATAC...TGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCTAGCCTGGACCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGGTTATAAAGACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGGTTGTATCTCTGAAAACTTaGAGCCTGGATGCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RRGYKDRNHDTRSRLEEVVSLKT*SLDASS Trigger: TGATGAAGCATCCAGGCTCAAAGTTTTCAGAGATAC...AACCTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTCTTTATAACCTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS-3UTR CAA 90 bp | AAAGACAGAAACCATGACACTAGGTCCAGGCTAGAAGAGGTTTTAAAGACAGAAATGTCTTCCAAAATCTaGACCAAAAGGTGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDRNHDTRSRLEEVLKTEMSSKI*TKRWIW Trigger: CCAAATCCACCTTTTGGTCAAGATTTTGGAAGACAT...TTCTGTCTTTAAAACCTCTTCTAGCCTGGACCTAGTGTCATGGTTTCTGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050732.14 ENSMUST00000205577.2 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS CCA 72 bp | TGTAGAACTGCCCTCCTACATTCAGCTCCACAACGATaGCCGGGTCAGGGCACAGGATCCGGGACTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CRTALLHSAPQR*PGQGTGSGTPG Trigger: GCCAGGAGTCCCGGATCCTGTGCCCTGACCCGGCCATCGTTGTGGAGCTGAATGTAGGAGGGCAGTTCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS TCA 72 bp | CAGGGCACAGGATCCGGGACTCCTGGCTGGACTCCTTaGGTAGGTTTACAGGCAGAGCCTCCTGACTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QGTGSGTPGWTP*VGLQAEPPDWV Trigger: AACCCAGTCAGGAGGCTCTGCCTGTAAACCTACTCAAGGAGTCCAGCCAGGAGTCCCGGATCCTGTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS GCA 72 bp | AGGCAGAGCCTCCTGACTGGGTTCCTTGAGCGATTTTaGGGGCTGAGACTGCTTGCCGGGCTCCTTGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQSLLTGFLERF*GLRLLAGLLDL Trigger: CAGATCAAGGAGCCCGGCAAGCAGTCTCAGCCCGCAAAATCGCTCAAGGAACCCAGTCAGGAGGCTCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS GCA 72 bp | GGGCTGAGACTGCTTGCCGGGCTCCTTGATCTGGTTTaGGGGCAGGCTCATCCTGTAATTCCAGCACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLRLLAGLLDLV*GQAHPVIPALG Trigger: CCCAAGTGCTGGAATTACAGGATGAGCCTGCCCGCAAACCAGATCAAGGAGCCCGGCAAGCAGTCTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206658.2 |
||
| CDS TCA 72 bp | GTAGGTTTACAGGCAGAGCCTCCTGACTGGGTTCCTTaGGCGATTTTGCGGGCTGAGACTGCTTGCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VGLQAEPPDWVP*AILRAETACRA Trigger: AGCCCGGCAAGCAGTCTCAGCCCGCAAAATCGCTCAAGGAACCCAGTCAGGAGGCTCTGCCTGTAAACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000121987.3 ENSMUST00000143321.3 ENSMUST00000206279.2 ENSMUST00000206658.2 |
||
| CDS TCA 72 bp | GATGACCTTTGCCCAGGAACTCATTCAAGCACTTCTTaGGCAGGGAAGACGGAACACCGATGGCCGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DDLCPGTHSSTS*AGKTEHRWPGQ Trigger: CTGACCCGGCCATCGGTGTTCCGTCTTCCCTGCTCAAGAAGTGCTTGAATGAGTTCCTGGGCAAAGGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121987.3 |
||