Pregenerated sensors for KCTD12B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041633Ensembl transcript IDs: ENSMUST00000039424.14, ENSMUST00000112572.3
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGAACCTAGAGTGATTAATGTGTCTATTTCTAAAGGAGACAGTTaGCATGGAAACAGAGGAGAGAGACTGTTTGAGGGTTTGTATTTT | + |
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Preference number: 1 (lower is better) Translates to: HEPRVINVSISKGDS*HGNRGERLFEGLYF Trigger: AAAATACAAACCCTCAAACAGTCTCTCTCCTCTGTTTCCATGCCAACTGTCTCCTTTAGAAATAGACACATTAATCACTCTAGGTTCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 90 bp | AGGTCCCCAATGTTCTCATCTAAGAATAAATTCTTGCTTCCAACCTaGTTGATTACAAAGACATTGGCAGGGAGTCAGATGATAAATCTC | + |
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Preference number: 1 (lower is better) Translates to: RSPMFSSKNKFLLPT*LITKTLAGSQMINL Trigger: GAGATTTATCATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAATTTATTCTTAGATGAGAACATTGGGGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 90 bp | AAGTGGCATTTCTCAATATTATACAGAACACTCACGAACCTAGAGTaGTTAATGTGTCTATTTCTAAAGGAGACAGTTGGCATGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: KWHFSILYRTLTNLE*LMCLFLKETVGMET Trigger: TGTTTCCATGCCAACTGTCTCCTTTAGAAATAGACACATTAATCACTCTAGGTTCGTGAGTGTTCTGTATAATATTGAGAAATGCCACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR GCA 90 bp | GTTTCAGCATTTGTGTACAATTCCATTAATGTAGATAGTACAAGCTaGAGCAAGCAAATACCCAAGAATCATAGCAGATTACCACTAACA | + |
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Preference number: 1 (lower is better) Translates to: VSAFVYNSINVDSTS*SKQIPKNHSRLPLT Trigger: TGTTAGTGGTAATCTGCTATGATTCTTGGGTATTTGCTTGCTGCAGCTTGTACTATCTACATTAATGGAATTGTACACAAATGCTGAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR CCA 90 bp | CATAGCAGATTACCACTAACAAGCAATAATTCTGGATATTGCTCATaGCTGTGTAACATCAGATATGGTTCTCTATACTTTCAGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: HSRLPLTSNNSGYCS*LCNIRYGSLYFQNF Trigger: AAAGTTCTGAAAGTATAGAGAACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAGTGGTAATCTGCTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCAAGCCACAGAGCTACCAACCACTCAGCCTTTCTGTCTTAGACCAGAGAGGAGACAGTTGGCATaGAAACAGAGGAGAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: SVQATELPTTQPFCLRPERRQLA*KQRRET Trigger: AGTCTCTCTCCTCTGTTTCCATGCCAACTGTCTCCT...CTCTGGTCTAAGACAGAAAGGCTGAGTGGTTGGTAGCTCTGTGGCTTGGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTTGGTAATACTTaGAACATGCCAGAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TTSLGQREERERERERERDFGNT*NMPEEL Trigger: TAGCTCCTCTGGCATGTTTCAAGTATTACCAAAGTC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR GCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGATAGTACAAGCTaGAGCAAGCAAATACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TTSLGQREERERERERERVDSTS*SKQIPK Trigger: CTTGGGTATTTGCTTGCTGCAGCTTGTACTATCTAC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGGACTTTGGTAATACTTaGAACATGCCAGAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: FASEYNISRAERGEREREDFGNT*NMPEEL Trigger: TAGCTCCTCTGGCATGTTTCAAGTATTACCAAAGTC...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGTATGGAGAATATGCCTaGGAGTTGACGTTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: FASEYNISRAERGEREREYGEYA*ELTFTE Trigger: TTCAGTGAACGTCAACTCCCAGGCATATTCTCCATA...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATGGAATCAATaGGGTTTGAAGATGACCACA | + |
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Preference number: 2 (lower is better) Translates to: TTSLGQREEREREREREREIWNQ*GLKMTT Trigger: TGTGGTCATCTTCAAACCTCATTGATTCCATATTTC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTGTAGACAACTACATCACATAGTAAGTCACCAGGGCACAGCTACTTCAAGGAGACAGTTGGCATaGAAACAGAGGAGAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: SNCRQLHHIVSHQGTATSRRQLA*KQRRET Trigger: AGTCTCTCTCCTCTGTTTCCATGCCAACTGTCTCCT...TGAAGTAGCTGTGCCCTGGTGACTTACTATGTGATGTAGTTGTCTACAGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | CCACCTTTCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATCTCTACTATCTATACTaGTGCACAGCTTTCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: PPFYEPPRGVLSSFSTKHLYYLY*CTAFTP Trigger: TGGAGTGAAAGCTGTGCATCAGTATAGATAGTAGAG...ATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGAAAGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGTTCTTGCTTCCAACCTaGTTGATTACAAAGACATTG | + |
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Preference number: 2 (lower is better) Translates to: FASEYNISRAERGEREREFLLPT*LITKTL Trigger: CAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAA...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGGCTGTACTGATTGTATaGCTACTATGTGATAATCCA | + |
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Preference number: 2 (lower is better) Translates to: FASEYNISRAERGEREREAVLIV*LLCDNP Trigger: TGGATTATCACATAGTAGGCATACAATCAGTACAGC...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATAAGGAGAGAGACTGTTTaGGGGTTTGTATTTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HIVSHQGTATSLSVLWNIRRETV*GFVFSE Trigger: CTCAGAAAATACAAACCCTCAAACAGTCTCTCTCCT...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | CCACCTTTCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATCTCACGAACCTAGAGTaGTTAATGTGTCTATTTCTA | + |
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Preference number: 2 (lower is better) Translates to: PPFYEPPRGVLSSFSTKHLTNLE*LMCLFL Trigger: TAGAAATAGACACATTAATCACTCTAGGTTCGTGAG...ATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGAAAGGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAACTGTAGACAACTACATCACATAGTAAGTCACCAGGGCACAGCTACTTCAATCCATGTAGTAATGTaGATAACTGTCTGTCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SNCRQLHHIVSHQGTATSIHVVM*ITVCPS Trigger: GCTTGGACAGACAGTTATTCACATTACTACATGGAT...TGAAGTAGCTGTGCCCTGGTGACTTACTATGTGATGTAGTTGTCTACAGTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR GCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATAAGAGGGTATCTGAAGTaGTGTACTGATTGTATGCCT | + |
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Preference number: 2 (lower is better) Translates to: HIVSHQGTATSLSVLWNIRGYLK*CTDCMP Trigger: AGGCATACAATCAGTACAGCACTTCAGATACCCTCT...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATTAACTAGGAGAGAGACTGTTTaGGGGTTTGTATTTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VSHQGTATSLSVLWNILTRRETV*GFVFSE Trigger: CTCAGAAAATACAAACCCTCAAACAGTCTCTCTCCT...AGTTAATATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATTAACTTGCTTCCAACCTGATTaGTTACAAAGACATTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VSHQGTATSLSVLWNILTCFQPD*LQRHWQ Trigger: CTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCA...AGTTAATATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR GCA 90 bp | CTAACAAGCAATAATTCTGGATATTGCTCATGGCTGTGTAACATCAGATATGGTAGAGGGTATCTGAAGTaGTGTACTGATTGTATGCCT | + |
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Preference number: 2 (lower is better) Translates to: LTSNNSGYCSWLCNIRYGRGYLK*CTDCMP Trigger: AGGCATACAATCAGTACAGCACTTCAGATACCCTCT...ACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATTAACTTTCTTGCTTCCAACCTaGTTGATTACAAAGACATTG | + |
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Preference number: 2 (lower is better) Translates to: VSHQGTATSLSVLWNILTFLLPT*LITKTL Trigger: CAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAA...AGTTAATATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR GCA 90 bp | CTAACAAGCAATAATTCTGGATATTGCTCATGGCTGTGTAACATCAGATATGGTAAGGTGAGCTTAAAATaGTCACACAGTCACATCACT | + |
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Preference number: 2 (lower is better) Translates to: LTSNNSGYCSWLCNIRYGKVSLK*SHSHIT Trigger: AGTGATGTGACTGTGTGAGCATTTTAAGCTCACCTT...ACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR-3UTR TCA 90 bp | CTAACAAGCAATAATTCTGGATATTGCTCATGGCTGTGTAACATCAGATATGGTCTCACGAACCTAGAGTaGTTAATGTGTCTATTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LTSNNSGYCSWLCNIRYGLTNLE*LMCLFL Trigger: TAGAAATAGACACATTAATCACTCTAGGTTCGTGAG...ACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | TATTTGGGATTGAATAACCCATCAGGGCTCTGTCCCTaGAGAAGACTAGTTCTGCCTCTCTTAGCAGCCATT | + |
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Preference number: 3 (lower is better) Translates to: YLGLNNPSGLCP*RRLVLPLLAAI Trigger: AATGGCTGCTAAGAGAGGCAGAACTAGTCTTCTTCAGGGACAGAGCCCTGATGGGTTATTCAATCCCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | GAAAGTGAAGGTAGACAGTGTGATAGTGTATCACTATaGAGGAAGGCAGATGTATTGAGGCAGCAAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: ESEGRQCDSVSL*RKADVLRQQET Trigger: AGTCTCTTGCTGCCTCAATACATCTGCCTTCCTTCATAGTGATACACTATCACACTGTCTACCTTCACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | GGACTTAGTGACCAGAGGGTATCTGAAGTGCTGTACTaGTTGTATGCCTACTATGTGATAATCCATGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: GLSDQRVSEVLY*LYAYYVIIHVV Trigger: TACTACATGGATTATCACATAGTAGGCATACAATCAGTACAGCACTTCAGATACCCTCTGGTCACTAAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | TTGTATGCCTACTATGTGATAATCCATGTAGTAATGTaGATAACTGTCTGTCCAAGCCACAGAGCTACCAAC | + |
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Preference number: 3 (lower is better) Translates to: LYAYYVIIHVVM*ITVCPSHRATN Trigger: GTTGGTAGCTCTGTGGCTTGGACAGACAGTTATTCACATTACTACATGGATTATCACATAGTAGGCATACAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | TATTGGTCGTATGTATTTGTGTTTAGTATTTGGGATTaGATAACCCATCAGGGCTCTGTCCCTGAAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: YWSYVFVFSIWD*ITHQGSVPEED Trigger: GTCTTCTTCAGGGACAGAGCCCTGATGGGTTATTCAATCCCAAATACTAAACACAAATACATACGACCAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | ATGTTCTCATCTAAGAATAAATTCTTGCTTCCAACCTaGTTGATTACAAAGACATTGGCAGGGAGTCAGATG | + |
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Preference number: 3 (lower is better) Translates to: MFSSKNKFLLPT*LITKTLAGSQM Trigger: CATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAATTTATTCTTAGATGAGAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | TCTAAAATGTGCTGCATCTTAATTTCTGTATTCAACTaGTCTCTAAAGGACTTAGTGACCAGAGGGTATCTG | + |
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Preference number: 3 (lower is better) Translates to: SKMCCILISVFN*SLKDLVTRGYL Trigger: CAGATACCCTCTGGTCACTAAGTCCTTTAGAGATCAGTTGAATACAGAAATTAAGATGCAGCACATTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR GCA 72 bp | AGCAGATTACCACTAACAAGCAATAATTCTGGATATTaGTCATGGCTGTGTAACATCAGATATGGTTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: SRLPLTSNNSGY*SWLCNIRYGSL Trigger: TAGAGAACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAGTGGTAATCTGCT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR CCA 72 bp | TTAACAACAAAAGAAGTTAAATATGGAGAATATGCCTaGGAGTTGACGTTCACTGAAAGGCTAGCATACTGT | + |
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Preference number: 3 (lower is better) Translates to: LTTKEVKYGEYA*ELTFTERLAYC Trigger: ACAGTATGCTAGCCTTTCAGTGAACGTCAACTCCCAGGCATATTCTCCATATTTAACTTCTTTTGTTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR TCA 72 bp | TTCTCAATATTATACAGAACACTCACGAACCTAGAGTaGTTAATGTGTCTATTTCTAAAGGAGACAGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: FSILYRTLTNLE*LMCLFLKETVG Trigger: GCCAACTGTCTCCTTTAGAAATAGACACATTAATCACTCTAGGTTCGTGAGTGTTCTGTATAATATTGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| 3UTR GCA 72 bp | TTTGTGTACAATTCCATTAATGTAGATAGTACAAGCTaGAGCAAGCAAATACCCAAGAATCATAGCAGATTA | + |
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Preference number: 3 (lower is better) Translates to: FVYNSINVDSTS*SKQIPKNHSRL Trigger: TAATCTGCTATGATTCTTGGGTATTTGCTTGCTGCAGCTTGTACTATCTACATTAATGGAATTGTACACAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR GCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGCTTGGCTGTCCCTaGCCAGAGTATAGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TTSLGQREERERERERERLLGCP*PEYRSL Trigger: GAGGCTCCTATACTCTGGGCAGGGACAGCCAAGCAG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR GCA 90 bp | TCTGTCCAAGCCACAGAGCTACCAACCACTCAGCCTTTCTGTCTTAGACCAGAGGGCGATCTGGGTCTCTaGTCTCATTCAGAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SVQATELPTTQPFCLRPEGDLGL*SHSECL Trigger: GAGACACTCTGAATGAGAGCAGAGACCCAGATCGCC...CTCTGGTCTAAGACAGAAAGGCTGAGTGGTTGGTAGCTCTGTGGCTTGGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR CCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGGCCACACTCTaGAAAATGATCCGGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TTSLGQREEREREREREREPATL*KMIRKH Trigger: GTGCTTCCGGATCATTTTCCAGAGTGTGGCCGGCTC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR TCA 90 bp | TCTGTCCAAGCCACAGAGCTACCAACCACTCAGCCTTTCTGTCTTAGACCAGAGCCACACTCTGGAAAATaGTCCGGAAGCACTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: SVQATELPTTQPFCLRPEPHSGK*SGSTTC Trigger: GCAAGTAGTGCTTCCGGATCATTTTCCAGAGTGTGG...CTCTGGTCTAAGACAGAAAGGCTGAGTGGTTGGTAGCTCTGTGGCTTGGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR GCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGATCTGGGTCTCTaGTCTCATTCAGAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TTSLGQREERERERERERGDLGL*SHSECL Trigger: GAGACACTCTGAATGAGAGCAGAGACCCAGATCGCC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR CCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGGAGCCGGCCACACTCTaGAAAATGATCCGGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FASEYNISRAERGEREREEPATL*KMIRKH Trigger: GTGCTTCCGGATCATTTTCCAGAGTGTGGCCGGCTC...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR TCA 90 bp | CCACCTTTCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATCTGTTTGGTCATGTGTaGCAGTGCAGGTGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: PPFYEPPRGVLSSFSTKHLFGHV*QCRCQW Trigger: CCACTGGCACCTGCACTGTCACACATGACCAAACAG...ATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGAAAGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR TCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGACTCCTCGGTCGGTTTaGCATCACTTGACTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FASEYNISRAERGERERETPRSV*HHLTFL Trigger: CAGAAAAGTCAAGTGATGTCAAACCGACCGAGGAGT...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS-3UTR TCA 90 bp | TTTGCTTCTGAGTACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAAGGATTCTTTACACTaGACATTTCCCAGAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FASEYNISRAERGEREREKDSLH*TFPRAG Trigger: CCCGGCTCTGGGAAATGTTCAGTGTAAAGAATCCTT...CTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGTACTCAGAAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR GCA 90 bp | ATTCTTGCTTCCAACCTGATTGATTACAAAGACATTGGCAGGGAGTCAGATGATCTGCTTGGCTGTCCCTaGCCAGAGTATAGGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILASNLIDYKDIGRESDDLLGCP*PEYRSL Trigger: GAGGCTCCTATACTCTGGGCAGGGACAGCCAAGCAG...ATCATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | CCACCTTTCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATCCACACTCTGGAAAATaGTCCGGAAGCACTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPFYEPPRGVLSSFSTKHPHSGK*SGSTTC Trigger: GCAAGTAGTGCTTCCGGATCATTTTCCAGAGTGTGG...ATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGAAAGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTCCGAACACTTCTTTaGCTAATGAGATCTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSLGQREERERERERERLRTLL*LMRSYH Trigger: GTGGTAAGATCTCATTAGCCAAAGAAGTGTTCGGAG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATACTCTGGAGGGCGATCTaGGTCTCTGCTCTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHQGTATSLSVLWNILWRAI*VSALIQ Trigger: CTGAATGAGAGCAGAGACCCAGATCGCCCTCCAGAG...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | ATTCTTGCTTCCAACCTGATTGATTACAAAGACATTGGCAGGGAGTCAGATGATCTCTGGAGGGCGATCTaGGTCTCTGCTCTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILASNLIDYKDIGRESDDLWRAI*VSALIQ Trigger: CTGAATGAGAGCAGAGACCCAGATCGCCCTCCAGAG...ATCATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | CCACCTTTCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATACTCCTCGGTCGGTTTaGCATCACTTGACTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPFYEPPRGVLSSFSTKHTPRSV*HHLTFL Trigger: CAGAAAAGTCAAGTGATGTCAAACCGACCGAGGAGT...ATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGAAAGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| 3UTR CAA 72 bp | GGCAGATGTATTGAGGCAGCAAGAGACTCTGATAAGTaGAAGATAGGAGTTGAGACTCTAGGGGCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRCIEAARDSDK*KIGVETLGAEK Trigger: CTTTTCAGCCCCTAGAGTCTCAACTCCTATCTTCAACTTATCAGAGTCTCTTGCTGCCTCAATACATCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACTGTAGACAACTACATCACATAGTAAGTCACCAGGGCACAGCTACTTCACTCCCTTTGTTGTCCTaGATCAGTGAGCAAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SNCRQLHHIVSHQGTATSLPLLS*ISEQGF Trigger: GAATCCTTGCTCACTGATCCAGGACAACAAAGGGAG...TGAAGTAGCTGTGCCCTGGTGACTTACTATGTGATGTAGTTGTCTACAGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGCCTACTATGTGATAATCCATGTAGTAATGTGAATAACTGTCTGTCCCTGTTTGGTCATGTGTaGCAGTGCAGGTGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVCLLCDNPCSNVNNCLSLFGHV*QCRCQW Trigger: CCACTGGCACCTGCACTGTCACACATGACCAAACAG...GGACAGACAGTTATTCACATTACTACATGGATTATCACATAGTAGGCATACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | ATTCTTGCTTCCAACCTGATTGATTACAAAGACATTGGCAGGGAGTCAGATGATCTCCCTTTGTTGTCCTaGATCAGTGAGCAAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILASNLIDYKDIGRESDDLPLLS*ISEQGF Trigger: GAATCCTTGCTCACTGATCCAGGACAACAAAGGGAG...ATCATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATTGCATGCTACCATGTaGAAGCCAGCATCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHQGTATSLSVLWNILHATM*KPASAS Trigger: ACTAGCTGATGCTGGCTTCCACATGGTAGCATGCAA...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATAGTTGTCCTGGATCAGTaGGCAAGGATTCTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHQGTATSLSVLWNIVVLDQ*ARILYT Trigger: AGTGTAAAGAATCCTTGCTCACTGATCCAGGACAAC...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCACTTAGGTCCCCAATGTTCTCATCTAAGAATAAATTCTTGCTTCCAAAATTTGGCATCTGCTTaGCTGTCCCTGCCCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLHLGPQCSHLRINSCFQNLASA*LSLPRV Trigger: TACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATT...TTGGAAGCAAGAATTTATTCTTAGATGAGAACATTGGGGACCTAAGTGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATTAACTTTGCATGCTACCATGTaGAAGCCAGCATCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSHQGTATSLSVLWNILTLHATM*KPASAS Trigger: ACTAGCTGATGCTGGCTTCCACATGGTAGCATGCAA...AGTTAATATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCACTTAGGTCCCCAATGTTCTCATCTAAGAATAAATTCTTGCTTCCAAAAGGATTCTTTACACTaGACATTTCCCAGAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHLGPQCSHLRINSCFQKDSLH*TFPRAG Trigger: CCCGGCTCTGGGAAATGTTCAGTGTAAAGAATCCTT...TTGGAAGCAAGAATTTATTCTTAGATGAGAACATTGGGGACCTAAGTGAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | TCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATGGTAAAATCAGGGCCACTAATATaGATGCTATTGGTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMNLLEECCQVFPLSMVKSGPLI*MLLVEE Trigger: CTCTTCAACCAATAGCATTCATATTAGTGGCCCTGA...TTTTACCATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATCAGGGCCACTAATATaGATGCTATTGGTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHQGTATSLSVLWNISGPLI*MLLVEE Trigger: CTCTTCAACCAATAGCATTCATATTAGTGGCCCTGA...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CCA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATACTCCGAACACTTCTTTaGCTAATGAGATCTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHQGTATSLSVLWNILRTLL*LMRSYH Trigger: GTGGTAAGATCTCATTAGCCAAAGAAGTGTTCGGAG...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| 3UTR CAA 72 bp | ACAAAAGAAGTTAAATATGGAGAATATGCCTGGGAGTaGACGTTCACTGAAAGGCTAGCATACTGTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKEVKYGEYAWE*TFTERLAYCLG Trigger: ACCTAAACAGTATGCTAGCCTTTCAGTGAACGTCAACTCCCAGGCATATTCTCCATATTTAACTTCTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCACTTAGGTCCCCAATGTTCTCATCTAAGAATAAATTCTTGCTTCCAAAACCATCTCGATCTATaGAGAATCTCCCTTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLHLGPQCSHLRINSCFQNHLDL*RISLCC Trigger: ACAACAAAGGGAGATTCTTCATAGATCGAGATGGTT...TTGGAAGCAAGAATTTATTCTTAGATGAGAACATTGGGGACCTAAGTGAAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| 3UTR CAA 72 bp | AGGTTTGAAGATGACCACAAGAAAATCATACAGCCGTaGAAAGAGAAGATAGAATATCAATTATTGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RFEDDHKKIIQP*KEKIEYQLLTA Trigger: AGCTGTCAATAATTGATATTCTATCTTCTCTTTCAACGGCTGTATGATTTTCTTGTGGTCATCTTCAAACCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS GCA 90 bp | CTTACCACATACCATGATTCTAGCCACACGGCGGAATTTGGCATCTaGTTGGCTGTCCCTGCCCAGAGTATAGGAGCCTCGATAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTTYHDSSHTAEFGI*LAVPAQSIGASIAN Trigger: ATTGGCTATCGAGGCTCCTATACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATTCCGCCGTGTGGCTAGAATCATGGTATGTGGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCAAGCCACAGAGCTACCAACCACTCAGCCTTTCTGTCTTAGACCAGAGATGAAACCAGCCTTCTaGAGCTCAGAACCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQATELPTTQPFCLRPEMKPAF*SSEPGA Trigger: TGCCCCTGGTTCTGAGCTCAAGAAGGCTGGTTTCAT...CTCTGGTCTAAGACAGAAAGGCTGAGTGGTTGGTAGCTCTGTGGCTTGGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | CCACCTTTCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATGAATTTGGCATCTGCTaGGCTGTCCCTGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPFYEPPRGVLSSFSTKHEFGIC*AVPAQS Trigger: ACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATTC...ATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGAAAGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCAGCATCAGCTAGTTaGTCAAAAGCTTGTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTSLGQREERERERERERPASAS*SKACSK Trigger: CTTGGAACAAGCTTTTGACAAACTAGCTGATGCTGG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS TCA 90 bp | ACCATCTCGATCTATGAAGAATCTCCCTTTGTTGTCCTGGATCAGTaGGCAAGGATTCTTTACACTGAACATTTCCCAGAGCCGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: TISIYEESPFVVLDQ*ARILYTEHFPEPGT Trigger: GGTTCCCGGCTCTGGGAAATGTTCAGTGTAAAGAATCCTTGCTCACTGATCCAGGACAACAAAGGGAGATTCTTCATAGATCGAGATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS CCA 90 bp | TTCCAAGAAAGTGAATTTGAGGTAGTATCGAGAAGTATATCGCTCTaGAGGGCGATCTGGGTCTCTGCTCTCATTCAGAGTGTCTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FQESEFEVVSRSISL*RAIWVSALIQSVSE Trigger: TTCGGAGACACTCTGAATGAGAGCAGAGACCCAGATCGCCCTCCAGAGCGATATACTTCTCGATACTACCTCAAATTCACTTTCTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | ACAACATCTCTAGGGCAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCAATTGAGTTGAGCTaGTTCATTTTAGGAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTSLGQREERERERERERPIELS*FILGAN Trigger: GTTGGCTCCTAAAATGAACAAGCTCAACTCAATTGG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTGCCCTAGAGATGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | TCTATGAACCTCCTAGAGGAGTGCTGTCAAGTTTTTCCACTAAGCATGGTAAAAGAATTTGGCATCTGCTaGGCTGTCCCTGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SMNLLEECCQVFPLSMVKEFGIC*AVPAQS Trigger: ACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATTC...TTTTACCATGCTTAGTGGAAAAACTTGACAGCACTCCTCTAGGAGGTTCATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | TCAAACTGTAGACAACTACATCACATAGTAAGTCACCAGGGCACAGCTACTTCAGATCCTGTCATCTGTTaGGTCATGTGTGACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNCRQLHHIVSHQGTATSDPVIC*VMCDSA Trigger: TGCACTGTCACACATGACCAAACAGATGACAGGATC...TGAAGTAGCTGTGCCCTGGTGACTTACTATGTGATGTAGTTGTCTACAGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | TCAAACTGTAGACAACTACATCACATAGTAAGTCACCAGGGCACAGCTACTTCAATGAAGAATCTCCCTTaGTTGTCCTGGATCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNCRQLHHIVSHQGTATSMKNLP*LSWISE Trigger: CTCACTGATCCAGGACAACAAAGGGAGATTCTTCAT...TGAAGTAGCTGTGCCCTGGTGACTTACTATGTGATGTAGTTGTCTACAGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | CTAACAAGCAATAATTCTGGATATTGCTCATGGCTGTGTAACATCAGATATGGTATGAAACCAGCCTTCTaGAGCTCAGAACCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTSNNSGYCSWLCNIRYGMKPAF*SSEPGA Trigger: TGCCCCTGGTTCTGAGCTCAAGAAGGCTGGTTTCAT...ACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | CACATAGTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATACCAGCATCAGCTAGTTaGTCAAAAGCTTGTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HIVSHQGTATSLSVLWNIPASAS*SKACSK Trigger: CTTGGAACAAGCTTTTGACAAACTAGCTGATGCTGG...TATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTACTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCACCAGGGCACAGCTACTTCACTTTCGGTATTATGGAATATATTAACTGATCCTGTCATCTGTTaGGTCATGTGTGACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSHQGTATSLSVLWNILTDPVIC*VMCDSA Trigger: TGCACTGTCACACATGACCAAACAGATGACAGGATC...AGTTAATATATTCCATAATACCGAAAGTGAAGTAGCTGTGCCCTGGTGACTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS TCA 90 bp | TCATATAGTCTAGGACATAGCGAAAGAGAAAACCATCTCGATCTATaGAGAATCTCCCTTTGTTGTCCTGGATCAGTGAGCAAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SYSLGHSERENHLDL*RISLCCPGSVSKDS Trigger: AGAATCCTTGCTCACTGATCCAGGACAACAAAGGGAGATTCTTCATAGATCGAGATGGTTTTCTCTTTCGCTATGTCCTAGACTATATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | ATTCTTGCTTCCAACCTGATTGATTACAAAGACATTGGCAGGGAGTCAGATGATCCAATTGAGTTGAGCTaGTTCATTTTAGGAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILASNLIDYKDIGRESDDPIELS*FILGAN Trigger: GTTGGCTCCTAAAATGAACAAGCTCAACTCAATTGG...ATCATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | ATTCTTGCTTCCAACCTGATTGATTACAAAGACATTGGCAGGGAGTCAGATGATTCTCCGAACACTTCTTaGGCTAATGAGATCTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: ILASNLIDYKDIGRESDDSPNTS*ANEILP Trigger: TGGTAAGATCTCATTAGCCAAAGAAGTGTTCGGAGA...ATCATCTGACTCCCTGCCAATGTCTTTGTAATCAATCAGGTTGGAAGCAAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCACTTAGGTCCCCAATGTTCTCATCTAAGAATAAATTCTTGCTTCCAAATGAAGAATCTCCCTTaGTTGTCCTGGATCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLHLGPQCSHLRINSCFQMKNLP*LSWISE Trigger: CTCACTGATCCAGGACAACAAAGGGAGATTCTTCAT...TTGGAAGCAAGAATTTATTCTTAGATGAGAACATTGGGGACCTAAGTGAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | CTAACAAGCAATAATTCTGGATATTGCTCATGGCTGTGTAACATCAGATATGGTTCTCCGAACACTTCTTaGGCTAATGAGATCTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: LTSNNSGYCSWLCNIRYGSPNTS*ANEILP Trigger: TGGTAAGATCTCATTAGCCAAAGAAGTGTTCGGAGA...ACCATATCTGATGTTACACAGCCATGAGCAATATCCAGAATTATTGCTTGTTAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCACTTAGGTCCCCAATGTTCTCATCTAAGAATAAATTCTTGCTTCCAATTGGTTGAAGAGAAATaGAACGTAGTGTCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLHLGPQCSHLRINSCFQLVEEK*NVVSML Trigger: CAGCATTGACACTACGTTCAATTTCTCTTCAACCAA...TTGGAAGCAAGAATTTATTCTTAGATGAGAACATTGGGGACCTAAGTGAAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS GCA 72 bp | TACCATGATTCTAGCCACACGGCGGAATTTGGCATCTaGTTGGCTGTCCCTGCCCAGAGTATAGGAGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: YHDSSHTAEFGI*LAVPAQSIGAS Trigger: CGAGGCTCCTATACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATTCCGCCGTGTGGCTAGAATCATGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS CAA 72 bp | CATGATTCTAGCCACACGGCGGAATTTGGCATCTGCTaGGCTGTCCCTGCCCAGAGTATAGGAGCCTCGATA | + |
|
Preference number: 6 (lower is better) Translates to: HDSSHTAEFGIC*AVPAQSIGASI Trigger: TATCGAGGCTCCTATACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATTCCGCCGTGTGGCTAGAATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS TCA 72 bp | ACGAGGTCCAGATCCTGTCATCTGTTTGGTCATGTGTaGCAGTGCAGGTGCCAGTGGAGTTGCATGCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: TRSRSCHLFGHV*QCRCQWSCMLP Trigger: TGGTAGCATGCAACTCCACTGGCACCTGCACTGTCACACATGACCAAACAGATGACAGGATCTGGACCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
||
| CDS CAA 90 bp | ACCACATACCATGATTCTAGCCACACGGCGGAATTTGGCATCTGCTaGGCTGTCCCTGCCCAGAGTATAGGAGCCTCGATAGCCAATAGT | + |
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Preference number: 6 (lower is better) Translates to: TTYHDSSHTAEFGIC*AVPAQSIGASIANS Trigger: ACTATTGGCTATCGAGGCTCCTATACTCTGGGCAGGGACAGCCAAGCAGATGCCAAATTCCGCCGTGTGGCTAGAATCATGGTATGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CCA 72 bp | ACAGTGCAGGTGCCAGTGGAGTTGCATGCTACCATGTaGAAGCCAGCATCAGCTAGTTTGTCAAAAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TVQVPVELHATM*KPASASLSKAC Trigger: ACAAGCTTTTGACAAACTAGCTGATGCTGGCTTCCACATGGTAGCATGCAACTCCACTGGCACCTGCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CCA 72 bp | AGTGAATTTGAGGTAGTATCGAGAAGTATATCGCTCTaGAGGGCGATCTGGGTCTCTGCTCTCATTCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SEFEVVSRSISL*RAIWVSALIQS Trigger: ACTCTGAATGAGAGCAGAGACCCAGATCGCCCTCCAGAGCGATATACTTCTCGATACTACCTCAAATTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CAA 90 bp | ATAGAAAACATATTCAGTATACGAGGTCCAGATCCTGTCATCTGTTaGGTCATGTGTGACAGTGCAGGTGCCAGTGGAGTTGCATGCTAC | + |
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Preference number: 6 (lower is better) Translates to: IENIFSIRGPDPVIC*VMCDSAGASGVACY Trigger: GTAGCATGCAACTCCACTGGCACCTGCACTGTCACACATGACCAAACAGATGACAGGATCTGGACCTCGTATACTGAATATGTTTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS TCA 72 bp | CTAGGACATAGCGAAAGAGAAAACCATCTCGATCTATaGAGAATCTCCCTTTGTTGTCCTGGATCAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LGHSERENHLDL*RISLCCPGSVS Trigger: GCTCACTGATCCAGGACAACAAAGGGAGATTCTTCATAGATCGAGATGGTTTTCTCTTTCGCTATGTCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CAA 90 bp | GAGAGCTCTTCTAGATCAATCGGACATGAGTCATTTCCAATTGAGTaGAGCTTGTTCATTTTAGGAGCCAACATTTTGGCTAGTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ESSSRSIGHESFPIE*SLFILGANILASSG Trigger: GCCAGAACTAGCCAAAATGTTGGCTCCTAAAATGAACAAGCTCAACTCAATTGGAAATGACTCATGTCCGATTGATCTAGAAGAGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS TCA 72 bp | ATCTATGAAGAATCTCCCTTTGTTGTCCTGGATCAGTaGGCAAGGATTCTTTACACTGAACATTTCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: IYEESPFVVLDQ*ARILYTEHFPE Trigger: CTCTGGGAAATGTTCAGTGTAAAGAATCCTTGCTCACTGATCCAGGACAACAAAGGGAGATTCTTCATAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS TCA 72 bp | GCTCTCAGAACCATGGGATTATCAGGGCCACTAATATaGATGCTATTGGTTGAAGAGAAATTGAACGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: ALRTMGLSGPLI*MLLVEEKLNVV Trigger: CACTACGTTCAATTTCTCTTCAACCAATAGCATTCATATTAGTGGCCCTGATAATCCCATGGTTCTGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CAA 90 bp | TCTTCTAGATCAATCGGACATGAGTCATTTCCAATTGAGTTGAGCTaGTTCATTTTAGGAGCCAACATTTTGGCTAGTTCTGGCAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SSRSIGHESFPIELS*FILGANILASSGSL Trigger: TAAGCTGCCAGAACTAGCCAAAATGTTGGCTCCTAAAATGAACAAGCTCAACTCAATTGGAAATGACTCATGTCCGATTGATCTAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CAA 72 bp | ATTGAGTTGAGCTTGTTCATTTTAGGAGCCAACATTTaGGCTAGTTCTGGCAGCTTAAAGTATTCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IELSLFILGANI*ASSGSLKYSAS Trigger: AGAAGCAGAATACTTTAAGCTGCCAGAACTAGCCAAAATGTTGGCTCCTAAAATGAACAAGCTCAACTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CAA 72 bp | TCAATCGGACATGAGTCATTTCCAATTGAGTTGAGCTaGTTCATTTTAGGAGCCAACATTTTGGCTAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SIGHESFPIELS*FILGANILASS Trigger: AGAACTAGCCAAAATGTTGGCTCCTAAAATGAACAAGCTCAACTCAATTGGAAATGACTCATGTCCGATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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| CDS CAA 72 bp | TCTAGATCAATCGGACATGAGTCATTTCCAATTGAGTaGAGCTTGTTCATTTTAGGAGCCAACATTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SRSIGHESFPIE*SLFILGANILA Trigger: AGCCAAAATGTTGGCTCCTAAAATGAACAAGCTCAACTCAATTGGAAATGACTCATGTCCGATTGATCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039424.14 ENSMUST00000112572.3 |
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