Pregenerated sensors for KCTD12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098557Ensembl transcript IDs: ENSMUST00000184744.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGTGGGGTCCAAAGATGATGAAGACGCCCAGAGGATTTGTGGCTaGAGATTCGCAAGTGGGGTGCAGACGGGTCTGGGTGACCTACTA | + |
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Preference number: 1 (lower is better) Translates to: LVGSKDDEDAQRICG*RFASGVQTGLGDLL Trigger: TAGTAGGTCACCCAGACCCGTCTGCACCCCACTTGCGAATCTGCAGCCACAAATCCTCTGGGCGTCTTCATCATCTTTGGACCCCACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CCA 90 bp | TACTTGGTGACTGTCCCACTAGATCACGACAATCTGGGGGAAGGGTaGTTGGAGGCCAGGAGTAGAGGAAGCATGAGTGAAGGGCTACAT | + |
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Preference number: 1 (lower is better) Translates to: YLVTVPLDHDNLGEG*LEARSRGSMSEGLH Trigger: ATGTAGCCCTTCACTCATGCTTCCTCTACTCCTGGCCTCCAACCACCCTTCCCCCAGATTGTCGTGATCTAGTGGGACAGTCACCAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 90 bp | TCAGAACATTTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTaGATGGAGAGGAAAGGACCCAACGACATCAGCCTGGCTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SEHFISPKGFFYNPK*MERKGPNDISLAQS Trigger: TGACTGAGCCAGGCTGATGTCGTTGGGTCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAAATGTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CCA 90 bp | ACAACCCAAAGTGCATGGAGAGGAAAGGACCCAACGACATCAGCCTaGCTCAGTCATACTTACCTATCATATAATGAGATGACTGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TTQSAWRGKDPTTSA*LSHTYLSYNEMTAQ Trigger: CTGAGCAGTCATCTCATTATATGATAGGTAAGTATGACTGAGCCAGGCTGATGTCGTTGGGTCCTTTCCTCTCCATGCACTTTGGGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 90 bp | CCTTTTAAAGCACTCTCTCCACACAGCACTCTCAGTTCTGATCTCTaGAACCGCTATGGAGTCAAAGGGTTTAAGATGTCAAGGACTCGT | + |
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Preference number: 1 (lower is better) Translates to: PFKALSPHSTLSSDL*NRYGVKGFKMSRTR Trigger: ACGAGTCCTTGACATCTTAAACCCTTTGACTCCATAGCGGTTTCAGAGATCAGAACTGAGAGTGCTGTGTGGAGAGAGTGCTTTAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 90 bp | ACTCACACTTGGCCAGTGATTGACAGTCCTAAGTCATTTCAGGCTTaGAACAAAGGTTCTGAGCCATTACCTGATCCACCGCCTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: THTWPVIDSPKSFQA*NKGSEPLPDPPPKN Trigger: GTTTTTAGGCGGTGGATCAGGTAATGGCTCAGAACCTTTGTTTCAAGCCTGAAATGACTTAGGACTGTCAATCACTGGCCAAGTGTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 90 bp | TCCAAGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: SKYCGHREHCVLFTT*ERERERERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 90 bp | TTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACTaGAGTACTTATTTGCCTTCATTTAGAAACATTCCACTTGACAGC | + |
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Preference number: 1 (lower is better) Translates to: FCCIHLNTALLLGSH*STYLPSFRNIPLDS Trigger: GCTGTCAAGTGGAATGTTTCTAAATGAAGGCAAATAAGTACTTCAGTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CCA 90 bp | GCTTCAATTCATAAACAATGCAGACAAAACTTCAGCAGTTTCCCATaGCTTCTAGTGTTATGCAGACTTGACAAGGAAGCTAGAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: ASIHKQCRQNFSSFP*LLVLCRLDKEARTS Trigger: GGAAGTTCTAGCTTCCTTGTCAAGTCTGCATAACACTAGAAGCCATGGGAAACTGCTGAAGTTTTGTCTGCATTGTTTATGAATTGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CCA 90 bp | AACATAACCTACTTCCAGGTATGTGAAAACTTCTTCCAAGTACTGTaGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: NITYFQVCENFFQVL*TQRTLCFIHYLRER Trigger: TCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACTTGGAAGAAGTTTTCACATACCTGGAAGTAGGTTATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCCTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACAGCTCGGCAAACAGCTaGAGAGAAAGGGCGCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: VPCFCCIHLNTALLLGSHSSANS*RERAPP Trigger: CGGAGGCGCCCTTTCTCTTCAGCTGTTTGCCGAGCT...GTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CAA 90 bp | GAATCTGTCACTGCAACGTCAAACAAACGCAGGAAAGAAAGAGCATaGTTCCGGTTTTCAGAACAGCCCAGCAGCCCACACTTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ESVTATSNKRRKERA*FRFSEQPSSPHLLA Trigger: GGCCAGCAAGTGTGGGCTGCTGGGCTGTTCTGAAAACCGGAACAATGCTCTTTCTTTCCTGCGTTTGTTTGACGTTGCAGTGACAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACAGCTTCCTGGACCCCTGCTGCCCTTTCTTTAAAATCACACACTTTGTACAATCTGGGGGAAGGGTaGTTGGAGGCCAGGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: STASWTPAALSLKSHTLYNLGEG*LEARSR Trigger: TCTACTCCTGGCCTCCAACCACCCTTCCCCCAGATT...GTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCCTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACCAGCACTCTCAGTTCTaGTCTCTGAAACCGCTATGG | + |
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Preference number: 2 (lower is better) Translates to: VPCFCCIHLNTALLLGSHQHSQF*SLKPLW Trigger: CCATAGCGGTTTCAGAGATCAGAACTGAGAGTGCTG...GTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACAGCTTCCTGGACCCCTGCTGCCCTTTCTTTAAAATCACACACTTTGTACGTCCCCTGTTTCTGTTaGATTCACCTAAATACCGCG | + |
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Preference number: 2 (lower is better) Translates to: STASWTPAALSLKSHTLYVPCFC*IHLNTA Trigger: CGCGGTATTTAGGTGAATGCAACAGAAACAGGGGAC...GTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGACGCCCAGAGGATTTGTaGCTGCAGATTCGCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: FISPKGFFYNPKCMERKGRPEDL*LQIRKW Trigger: CCACTTGCGAATCTGCAGCCACAAATCCTCTGGGCG...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATTGGGGGAAGGGTGGTTaGAGGCCAGGAGTAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RERERERERERETYIIQNWGKGG*RPGVEE Trigger: TTCCTCTACTCCTGGCCTCCAACCACCCTTCCCCCA...ATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACTGAAGCGTGCAATCCGATTCTaGTCAATTCAGTCATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LFLLHSPKYRVIARLTLKRAIRF*SIQSFP Trigger: TGGGAATGACTGAATTGATCAGAATCGGATTGCACG...CTTCAGTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGAGACCTAAGTAAGGGCTaGCTGTCCCTACTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: FISPKGFFYNPKCMERKGDLSKG*LSLLTT Trigger: AGTGGTTAGTAGGGACAGTCAGCCCTTACTTAGGTC...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGTCTTCCAGCATACGGTCTACCATTCAATTGTCTAAAACTCTCTTTCTACAGAGGATTTGTGGCTaGAGATTCGCAAGTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LGSSSIRSTIQLSKTLFLQRICG*RFASGV Trigger: CACCCCACTTGCGAATCTGCAGCCACAAATCCTCTG...TAGAAAGAGAGTTTTAGACAATTGAATGGTAGACCGTATGCTGGAAGACCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGAGCAGCCCACACTTGCTaGCCTTGCAGAAAACATCAA | + |
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Preference number: 2 (lower is better) Translates to: FISPKGFFYNPKCMERKGAAHTC*PCRKHQ Trigger: TTGATGTTTTCTGCAAGGCCAGCAAGTGTGGGCTGC...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGAACCTCCTCTCTGCTGTaGTGTACACAGGATACACAC | + |
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Preference number: 2 (lower is better) Translates to: FISPKGFFYNPKCMERKGTSSLL*CTQDTH Trigger: GTGTGTATCCTGTGTACACCACAGCAGAGAGGAGGT...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CAA 90 bp | TTCCAAGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTaGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FQVLWTQRTLCFIHY*RERERERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGAGGAGTAGAGGAAGCATaGGTGAAGGGCTACATCAGA | + |
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Preference number: 2 (lower is better) Translates to: STVDTENTVFYSLLERERGVEEA*VKGYIR Trigger: TCTGATGTAGCCCTTCACTCATGCTTCCTCTACTCC...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGAAGCTTCCTGGACCCCTaGTGCCCTTTCTTTAAAATC | + |
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Preference number: 2 (lower is better) Translates to: STVDTENTVFYSLLERERSFLDP*CPFFKI Trigger: GATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCT...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGAACAGGCCAGCCAGTATaGTGGAAGGTACAGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: STVDTENTVFYSLLERERTGQPV*WKVQKC Trigger: ACATTTCTGTACCTTCCACCATACTGGCTGGCCTGT...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATCCAACGACATCAGCCTaGCTCAGTCATACTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: RERERERERERETYIIQNPTTSA*LSHTYL Trigger: TAGGTAAGTATGACTGAGCCAGGCTGATGTCGTTGG...ATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGATGGCTTCTAGTGTTATaGAGACTTGACAAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FISPKGFFYNPKCMERKGWLLVL*RLDKEA Trigger: AGCTTCCTTGTCAAGTCTGCATAACACTAGAAGCCA...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGAAGATGGGTCTTCTACTAATCTTGATAAAATCTAAGTTTACACGTACTTCTGAACTGCGTCCTTaGGGTCTTCCAGCATACGGT | + |
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Preference number: 2 (lower is better) Translates to: QLKMGLLLILIKSKFTRTSELRP*GLPAYG Trigger: ACCGTATGCTGGAAGACCCCAAGGACGCAGTTCAGA...AGTACGTGTAAACTTAGATTTTATCAAGATTAGTAGAAGACCCATCTTCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATATTCAGAAACAAGCCCAAAGCTaGAGTAAGCACAGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RERERERERETYIIQNIQKQAQS*SKHSFL Trigger: CAGGAAGCTGTGCTTACTCCAGCTTTGGGCTTGTTT...CTGAATATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGATCTGATAGACAAGCATaGAACCTGGGACCTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: STVDTENTVFYSLLERERSDRQA*NLGPVL Trigger: CAAAACAGGTCCCAGGTTCCATGCTTGTCTATCAGA...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGACAAATTCACAGGTGCTaGCCGAGATTTCAGAACATT | + |
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Preference number: 2 (lower is better) Translates to: STVDTENTVFYSLLERERQIHRC*PRFQNI Trigger: AATGTTCTGAAATCTCGGTCAGCACCTGTGAATTTG...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGATGGTATGTACAGATTTaGTCACAGGAGTCTGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: STVDTENTVFYSLLERERWYVQI*SQESEN Trigger: ATTCTCAGACTCCTGTGATCAAATCTGTACATACCA...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAAACTGTCACCAAGAAAAGTTAGCTATAACATAACCTACTTCCAGGTATTCTTCCAAGTACTGTaGACACAGAGAACACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: YPKLSPRKVSYNITYFQVFFQVL*TQRTLC Trigger: ACACAGTGTTCTCTGTGTCCACAGTACTTGGAAGAA...TACCTGGAAGTAGGTTATGTTATAGCTAACTTTTCTTGGTGACAGTTTTGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR GCA 90 bp | TATCCAAAACTGTCACCAAGAAAAGTTAGCTATAACATAACCTACTTCCAGGTAAGCACTAAGTTTTTATaGATTGCCCCTAACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YPKLSPRKVSYNITYFQVSTKFL*IAPNSR Trigger: TCTGCTGTTAGGGGCAATGCATAAAAACTTAGTGCT...TACCTGGAAGTAGGTTATGTTATAGCTAACTTTTCTTGGTGACAGTTTTGGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CCA 72 bp | CAGAGGGAAGCATACGGGCATACCTCCTCTCTGCTGTaGTGTGGAAGCATACGGGCATACCTCCTCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QREAYGHTSSLL*CGSIRAYLLSA Trigger: AGCAGAGAGGAGGTATGCCCGTATGCTTCCACACCACAGCAGAGAGGAGGTATGCCCGTATGCTTCCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | TCCAAAGATGATGAAGACGCCCAGAGGATTTGTGGCTaGAGATTCGCAAGTGGGGTGCAGACGGGTCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SKDDEDAQRICG*RFASGVQTGLG Trigger: ACCCAGACCCGTCTGCACCCCACTTGCGAATCTGCAGCCACAAATCCTCTGGGCGTCTTCATCATCTTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | GCCCAAAGCTGGAGTAAGCACAGCTTCCTGGACCCCTaGTGCCCTTTCTTTAAAATCACACACTTTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: AQSWSKHSFLDP*CPFFKITHFVH Trigger: ATGTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCTTACTCCAGCTTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 72 bp | GCACTCTCTCCACACAGCACTCTCAGTTCTGATCTCTaGAACCGCTATGGAGTCAAAGGGTTTAAGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: ALSPHSTLSSDL*NRYGVKGFKMS Trigger: TGACATCTTAAACCCTTTGACTCCATAGCGGTTTCAGAGATCAGAACTGAGAGTGCTGTGTGGAGAGAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 72 bp | TGGCCAGTGATTGACAGTCCTAAGTCATTTCAGGCTTaGAACAAAGGTTCTGAGCCATTACCTGATCCACCG | + |
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Preference number: 3 (lower is better) Translates to: WPVIDSPKSFQA*NKGSEPLPDPP Trigger: CGGTGGATCAGGTAATGGCTCAGAACCTTTGTTTCAAGCCTGAAATGACTTAGGACTGTCAATCACTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | AGGAAAGGCAATAAGGCAAAGGTCCCCTGTTTCTGTTaGATTCACCTAAATACCGCGTTATTGCTCGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: RKGNKAKVPCFC*IHLNTALLLGS Trigger: TGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAGGGGACCTTTGCCTTATTGCCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGAGTCATTCCCAGGTACTaGGTGACTGTCCCACTAGAT | + |
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Preference number: 3 (lower is better) Translates to: FISPKGFFYNPKCMERKGVIPRY*VTVPLD Trigger: ATCTAGTGGGACAGTCACCAAGTACCTGGGAATGAC...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | CAAAGCTGGAGTAAGCACAGCTTCCTGGACCCCTGCTaGCCTTTCTTTAAAATCACACACTTTGTACATGAA | + |
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Preference number: 3 (lower is better) Translates to: QSWSKHSFLDPC*PFFKITHFVHE Trigger: TTCATGTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCTTACTCCAGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR TCA 72 bp | TGTGGACACAGAGAACACTGTGTTTTATTCACTACTTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: CGHREHCVLFTT*ERERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTGAAGATGGGTCTTCTACTAATCTTGATAAAATCTAAGTTTACACGTACTAGACGCCCAGAGGATTaGTGGCTGCAGATTCGCAAG | + |
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Preference number: 3 (lower is better) Translates to: QLKMGLLLILIKSKFTRTRRPED*WLQIRK Trigger: CTTGCGAATCTGCAGCCACAAATCCTCTGGGCGTCT...AGTACGTGTAAACTTAGATTTTATCAAGATTAGTAGAAGACCCATCTTCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | CAAAACTTCAGCAGTTTCCCATGGCTTCTAGTGTTATaGAGACTTGACAAGGAAGCTAGAACTTCCGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: QNFSSFPWLLVL*RLDKEARTSVL Trigger: CAAAACGGAAGTTCTAGCTTCCTTGTCAAGTCTGCATAACACTAGAAGCCATGGGAAACTGCTGAAGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATAGGAGATCTAATGTGTaGGGGGTAAATAGAACTCTC | + |
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Preference number: 3 (lower is better) Translates to: RERERERERERETYIIQNRRSNV*GVNRTL Trigger: GAGAGTTCTATTTACCCCCAACACATTAGATCTCCT...ATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGAAGGAAAGAAAGAGCATaGTTCCGGTTTTCAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: STVDTENTVFYSLLERERRKERA*FRFSEQ Trigger: CTGTTCTGAAAACCGGAACAATGCTCTTTCTTTCCT...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGATTAGAAACATTCCACTaGACAGCTATCTACAGATGG | + |
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Preference number: 3 (lower is better) Translates to: FISPKGFFYNPKCMERKGLETFH*TAIYRW Trigger: CCATCTGTAGATAGCTGTCAAGTGGAATGTTTCTAA...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACTGTGGACACAGAGAACACTGTGTTTTATTCACTACTTGAGAGAGAGAGAGCTCACCAAAATGCGTaGCTTTTGTATATACACCAT | + |
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Preference number: 3 (lower is better) Translates to: STVDTENTVFYSLLERERAHQNA*LLYIHH Trigger: ATGGTGTATATACAAAAGCAACGCATTTTGGTGAGC...TCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR-3UTR CAA 90 bp | TATCCAAAACTGTCACCAAGAAAAGTTAGCTATAACATAACCTACTTCCAGGTAAGTTGTCTCTGGGTATaGGCACATCATACATCTCCC | + |
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Preference number: 3 (lower is better) Translates to: YPKLSPRKVSYNITYFQVSCLWV*AHHTSP Trigger: GGGAGATGTATGATGTGCCAATACCCAGAGACAACT...TACCTGGAAGTAGGTTATGTTATAGCTAACTTTTCTTGGTGACAGTTTTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | CACAGGCAAGGATATGAGAAGCTCACCAAAATGCGTTaGTTTTGTATATACACCATCAAATGCAAGTTACCA | + |
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Preference number: 3 (lower is better) Translates to: HRQGYEKLTKMR*FCIYTIKCKLP Trigger: TGGTAACTTGCATTTGATGGTGTATATACAAAAGCAACGCATTTTGGTGAGCTTCTCATATCCTTGCCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR GCA 72 bp | AAGTTCACAGGCAAGGATATGAGAAGCTCACCAAAATaGGTTGCTTTTGTATATACACCATCAAATGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: KFTGKDMRSSPK*VAFVYTPSNAS Trigger: ACTTGCATTTGATGGTGTATATACAAAAGCAACGCATTTTGGTGAGCTTCTCATATCCTTGCCTGTGAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | AGCACAGCTTCCTGGACCCCTGCTGCCCTTTCTTTAAAATCACACACTTTGTACAGCCGGAGCGCCGGCTaGCGTCCAAAGACTGGGACG | + |
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Preference number: 4 (lower is better) Translates to: STASWTPAALSLKSHTLYSRSAG*RPKTGT Trigger: CGTCCCAGTCTTTGGACGGCAGCCGGCGCTCCGGCT...GTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR TCA 90 bp | TTGGGGTCTTCCAGCATACGGTCTACCATTCAATTGTCTAAAACTCTCTTTCTAAAGACTGGGACGGCGTaGGCAGGGGCCCCGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LGSSSIRSTIQLSKTLFLKTGTA*AGAPPR Trigger: GCGCGGCGGGGCCCCTGCTCACGCCGTCCCAGTCTT...TAGAAAGAGAGTTTTAGACAATTGAATGGTAGACCGTATGCTGGAAGACCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | GTCCCCTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACGCCAGCTCCTGCGGCTaGTGCTGCGTGAACATACGC | + |
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Preference number: 4 (lower is better) Translates to: VPCFCCIHLNTALLLGSHASSCG*CCVNIR Trigger: GCGTATGTTCACGCAGCAGCAGCCGCAGGAGCTGGC...GTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | GTCCCCTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACGAAAGAAGCGGCCTTTaGTGTCCCGGGCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VPCFCCIHLNTALLLGSHERSGL*CPGPAP Trigger: AGGAGCTGGCCCGGGACAGCAAAGGCCGCTTCTTTC...GTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CCA 90 bp | CTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACTGAAGCTGCCGTCCAAAGACTaGGACGGCGTGAGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LFLLHSPKYRVIARLTLKLPSKD*DGVSRG Trigger: GCCCCTGCTCACGCCGTCCCAGTCTTTGGACGGCAG...CTTCAGTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CCA 90 bp | AGCACAGCTTCCTGGACCCCTGCTGCCCTTTCTTTAAAATCACACACTTTGTACCCCCAAACACCTCCTTaGCCAGCGACGTCTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: STASWTPAALSLKSHTLYPQTPP*PATSCR Trigger: GCGGCAAGACGTCGCTGGCCAAGGAGGTGTTTGGGG...GTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGTCTTCCAGCATACGGTCTACCATTCAATTGTCTAAAACTCTCTTTCTACCACCCGCCGGAACTTaGCGTCCGCCTGAGCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LGSSSIRSTIQLSKTLFLPPAGT*RPPERR Trigger: GCGACGCTCAGGCGGACGCCAAGTTCCGGCGGGTGG...TAGAAAGAGAGTTTTAGACAATTGAATGGTAGACCGTATGCTGGAAGACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR TCA 90 bp | TTGATCTTTCGAATCTGTCACTGCAACGTCAAACAAACGCAGGAAAGAAAGAGCGCGGCTGCTGCTGCGTaGACATACGCCAGAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LIFRICHCNVKQTQERKSAAAAA*TYARAA Trigger: CGCTGCTCTGGCGTATGTTCACGCAGCAGCAGCCGC...GCTCTTTCTTTCCTGCGTTTGTTTGACGTTGCAGTGACAGATTCGAAAGATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATATTCAGCGCGGTAGCCGATGGTaGTGTAGCCGGAGCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RERERERERETYIIQNIQRGSRW*CSRSAG Trigger: GCCGGCGCTCCGGCTACATCACCATCGGCTACCGCG...CTGAATATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | CTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACTGAAGTCCTGCGGCTGCTGCTaGGTGAACATACGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LFLLHSPKYRVIARLTLKSCGCC*VNIRQS Trigger: GCTCTGGCGTATGTTCACGCAGCAGCAGCCGCAGGA...CTTCAGTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGACGCCTCCGCCCCCGTTaGGTAATCCTCGGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FISPKGFFYNPKCMERKGRLRPR*VILGCC Trigger: ACAGCACCCGAGGATTACCCAACGGGGGCGGAGGCG...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATATTCAGAACTTGGCGTCCGCCTaGGCGTCGCGCCCGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: RERERERERETYIIQNIQNLASA*ASRPMV Trigger: CACCATCGGGCGCGACGCTCAGGCGGACGCCAAGTT...CTGAATATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | CAGCTGAAGATGGGTCTTCTACTAATCTTGATAAAATCTAAGTTTACACGTACTCGCGCTGCAGCCGGCTaGGCTCCGGGAAGTAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: QLKMGLLLILIKSKFTRTRAAAG*APGSSR Trigger: CCGACTACTTCCCGGAGCGCAGCCGGCTGCAGCGCG...AGTACGTGTAAACTTAGATTTTATCAAGATTAGTAGAAGACCCATCTTCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTACATTATCCAAAATATTCAGGCACGGACACCACGGTaGAGCGCCGGGTCACATACA | + |
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Preference number: 4 (lower is better) Translates to: RERERERERETYIIQNIQARTPR*SAGSHT Trigger: TGTATGTGACCCGGCGCTGCACCGTGGTGTCCGTGC...CTGAATATTTTGGATAATGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | TATCCAAAACTGTCACCAAGAAAAGTTAGCTATAACATAACCTACTTCCAGGTAAGAGAGCCCTCCTTGTaGACCCCGCGGCGCGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: YPKLSPRKVSYNITYFQVREPSL*TPRREC Trigger: GCACTCGCGCCGCGGGGTGCACAAGGAGGGCTCTCT...TACCTGGAAGTAGGTTATGTTATAGCTAACTTTTCTTGGTGACAGTTTTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CAA 72 bp | AATCCGATTCTGATCAATTCAGTCATTCCCAGGTACTaGGTGACTGTCCCACTAGATCACGACAATCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NPILINSVIPRY*VTVPLDHDNLG Trigger: CCCCAGATTGTCGTGATCTAGTGGGACAGTCACCAAGTACCTGGGAATGACTGAATTGATCAGAATCGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CCA 90 bp | TTTATAAGCCCTAAGGGTTTCTTCTACAACCCAAAGTGCATGGAGAGGAAAGGAATCTTGTCCTCGCTCTaGTCGGTGCTGCTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: FISPKGFFYNPKCMERKGILSSL*SVLLAK Trigger: TTTTGCTAGCAGCACCGACCAGAGCGAGGACAAGAT...TCCTTTCCTCTCCATGCACTTTGGGTTGTAGAAGAAACCCTTAGGGCTTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CAA 72 bp | CTGTGGACACAGAGAACACTGTGTTTTATTCACTACTaGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LWTQRTLCFIHY*RERERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTAGTGAATAAAACACAGTGTTCTCTGTGTCCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR GCA 90 bp | TTGATCTTTCGAATCTGTCACTGCAACGTCAAACAAACGCAGGAAAGAAAGAGCAGCTTATCGAAGGCCTaGTCTAGGAAGTTGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: LIFRICHCNVKQTQERKSSLSKA*SRKLNL Trigger: CAAGTTCAACTTCCTAGAGCAGGCCTTCGATAAGCT...GCTCTTTCTTTCCTGCGTTTGTTTGACGTTGCAGTGACAGATTCGAAAGATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CAA 72 bp | TCCTTGGGGTCTTCCAGCATACGGTCTACCATTCAATaGTCTAAAACTCTCTTTCTAATGAGGGTCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SLGSSSIRSTIQ*SKTLFLMRVKS Trigger: AGATTTGACCCTCATTAGAAAGAGAGTTTTAGACAATTGAATGGTAGACCGTATGCTGGAAGACCCCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| 3UTR CAA 72 bp | CTCCAGTGGAGGTCTTCTAATAGGATTCTTCCATCTTaGTTTAATGGGCCTTGTAAAGAATCTAAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LQWRSSNRILPS*FNGPCKESKSS Trigger: GGAGGATTTAGATTCTTTACAAGGCCCATTAAACAAAGATGGAAGAATCCTATTAGAAGACCTCCACTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS GCA 90 bp | TGTCCGGGAAGAGCGGCGGCTCCGCCGAGGACGACGACGAGCCGCTaGCACCTCCGCCTCCGCCCCCGTTGGGTAATCCTCGGGTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CPGRAAAPPRTTTSR*HLRLRPRWVILGCC Trigger: ACAGCACCCGAGGATTACCCAACGGGGGCGGAGGCGGAGGTGGCAGCGGCTCGTCGTCGTCCTCGGCGGAGCCGCCGCTCTTCCCGGACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS GCA 90 bp | AAGAAGCGGCCTTTGCTGTCCCGGGCCAGCTCCTGCGGCTGCTGCTaGGTGAACATACGCCAGAGCAGCGAGTCGGGCACGGACACCACG | + |
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Preference number: 5 (lower is better) Translates to: KKRPLLSRASSCGCC*VNIRQSSESGTDTT Trigger: CGTGGTGTCCGTGCCCGACTCGCTGCTCTGGCGTATGTTCACGCAGCAGCAGCCGCAGGAGCTGGCCCGGGACAGCAAAGGCCGCTTCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS GCA 90 bp | AGAAAGAAGCGGCCTTTGCTGTCCCGGGCCAGCTCCTGCGGCTGCTaGTGCGTGAACATACGCCAGAGCAGCGAGTCGGGCACGGACACC | + |
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Preference number: 5 (lower is better) Translates to: RKKRPLLSRASSCGC*CVNIRQSSESGTDT Trigger: GGTGTCCGTGCCCGACTCGCTGCTCTGGCGTATGTTCACGCAGCAGCAGCCGCAGGAGCTGGCCCGGGACAGCAAAGGCCGCTTCTTTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS GCA 90 bp | TCCAGAAAGAAGCGGCCTTTGCTGTCCCGGGCCAGCTCCTGCGGCTaGTGCTGCGTGAACATACGCCAGAGCAGCGAGTCGGGCACGGAC | + |
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Preference number: 5 (lower is better) Translates to: SRKKRPLLSRASSCG*CCVNIRQSSESGTD Trigger: GTCCGTGCCCGACTCGCTGCTCTGGCGTATGTTCACGCAGCAGCAGCCGCAGGAGCTGGCCCGGGACAGCAAAGGCCGCTTCTTTCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CAA 90 bp | CTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACTGAAGCCCAGAGAGCCCTCCTaGTGCACCCCGCGGCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: LFLLHSPKYRVIARLTLKPREPS*CTPRRE Trigger: CTCGCGCCGCGGGGTGCACAAGGAGGGCTCTCTGGG...CTTCAGTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CAA 90 bp | AGCACAGCTTCCTGGACCCCTGCTGCCCTTTCTTTAAAATCACACACTTTGTACTTGGCCAGCGACGTCTaGCCGCACACGGTGATGCGC | + |
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Preference number: 5 (lower is better) Translates to: STASWTPAALSLKSHTLYLASDV*PHTVMR Trigger: GCGCATCACCGTGTGCGGCAAGACGTCGCTGGCCAA...GTACAAAGTGTGTGATTTTAAAGAAAGGGCAGCAGGGGTCCAGGAAGCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS-3UTR CAA 90 bp | GTCCCCTGTTTCTGTTGCATTCACCTAAATACCGCGTTATTGCTCGGCTCACACTCCCCAAACACCTCCTaGGCCAGCGACGTCTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: VPCFCCIHLNTALLLGSHSPNTS*ASDVLP Trigger: CGGCAAGACGTCGCTGGCCAAGGAGGTGTTTGGGGA...GTGTGAGCCGAGCAATAACGCGGTATTTAGGTGAATGCAACAGAAACAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS GCA 72 bp | AGAGCGGCGGCTCCGCCGAGGACGACGACGAGCCGCTaGCACCTCCGCCTCCGCCCCCGTTGGGTAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: RAAAPPRTTTSR*HLRLRPRWVIL Trigger: GAGGATTACCCAACGGGGGCGGAGGCGGAGGTGGCAGCGGCTCGTCGTCGTCCTCGGCGGAGCCGCCGCTCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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| CDS GCA 72 bp | TACGCCAGAGCAGCGAGTCGGGCACGGACACCACGGTaGAGCGCCGGGTCACATACACCTGCCCTCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: YARAASRARTPR*SAGSHTPALPR Trigger: ACGTGGGAGGGCAGGTGTATGTGACCCGGCGCTGCACCGTGGTGTCCGTGCCCGACTCGCTGCTCTGGCGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184744.2 |
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