Pregenerated sensors for KCTD11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046731Ensembl transcript IDs: ENSMUST00000050555.6, ENSMUST00000238978.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGAAGGGGGCAGCTCGATCTGGGAACCCCAGCTCTAGGCTCTaGCCAGGTATGGTGGAATCCCTGACTTTCATAGCTACCACACCA | + |
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Preference number: 1 (lower is better) Translates to: GWKGAARSGNPSSRL*PGMVESLTFIATTP Trigger: TGGTGTGGTAGCTATGAAAGTCAGGGATTCCACCATACCTGGCCAGAGCCTAGAGCTGGGGTTCCCAGATCGAGCTGCCCCCTTCCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CCA 90 bp | GGGAACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTATTGACTaGCAGGCGCACACACATGAAAGAGGCCTCTGGACACCATGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GNQDSREPGSIRSID*QAHTHERGLWTPWS Trigger: GGACCATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR TCA 90 bp | AAGATCACAGAAGGACCAATACACAAGCACAGGAGTCAGCAACACTaGTGGGAACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTAT | + |
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Preference number: 1 (lower is better) Translates to: KITEGPIHKHRSQQH*WEPRQQGARQHQIY Trigger: ATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCCATCAGTGTTGCTGACTCCTGTGCTTGTGTATTGGTCCTTCTGTGATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCCACACCCTCCCCGACTCTCGCAGGCGCACACACATaGAAGAGGCCTCTGGACACC | + |
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Preference number: 2 (lower is better) Translates to: PSAQEPRNAILPTPSPTLAGAHT*KRPLDT Trigger: GGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGC...GAGAGTCGGGGAGGGTGTGGGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CCA 90 bp | ACACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGAGAGCCACAGGCCCCTTaGCTGACTCATCCCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TPWSSPTSIQDPLEFQKGEPQAP*LTHPPP Trigger: AGGAGGGGGATGAGTCAGCCAAGGGGCCTGTGGCTC...TCCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGGCAGGCGCACACACATGAAAGAGGCCTCTGGACACCATGGTCCAGCCCCACTTTGCCACACTTCTaGATACAGAGGACCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: DWQAHTHERGLWTPWSSPTLPHF*IQRTHP Trigger: AGGATGGGTCCTCTGTATTCAGAAGTGTGGCAAAGT...GGGGCTGGACCATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CAA 90 bp | CTGATGGGAACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTATaGACTGGCAGGCGCACACACATGAAAGAGGCCTCTGGACACCAT | + |
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Preference number: 2 (lower is better) Translates to: LMGTKTAGSQAASDL*TGRRTHMKEASGHH Trigger: ATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | CTACGTGGCAGCGCAGGCATAAACACACATGCAAACACACACACACACACACACGCAGGCGCACACACATaGAAGAGGCCTCTGGACACC | + |
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Preference number: 2 (lower is better) Translates to: LRGSAGINTHANTHTHTHAGAHT*KRPLDT Trigger: GGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGC...GTGTGTGTGTGTGTGTGTGTTTGCATGTGTGTTTATGCCTGCGCTGCCACGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGAGGTCTCAGAGGCCCAGCTAAGCCCAGAGGCTTTTACCTCTCATAGGAGGAGTCAGCAACACTaGTGGGAACCAAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPEVSEAQLSPEAFTSHRRSQQH*WEPRQQ Trigger: CTGCTGTCTTGGTTCCCATCAGTGTTGCTGACTCCT...CCTATGAGAGGTAAAAGCCTCTGGGCTTAGCTGGGCCTCTGAGACCTCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CAA 90 bp | CTTAGGCCTTCCTTACCCAGCTATTTCCTAGCAACAGGCTCATGGTaGTCTCAGCAACCAAGAGCTCCCAGAGGTCTCAGAGGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LRPSLPSYFLATGSW*SQQPRAPRGLRGPA Trigger: AGCTGGGCCTCTGAGACCTCTGGGAGCTCTTGGTTGCTGAGACAACCATGAGCCTGTTGCTAGGAAATAGCTGGGTAAGGAAGGCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGAGCGCCTGGGCAAAGAGGTaGTATCTTACTTTGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: TMVQPHFHTGSSGIPEGSAWAKR*YLTLPH Trigger: GTGTGGCAAAGTAAGATAGCACCTCTTTGCCCAGGC...GCTCCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCTAGGATGGAGTGTCCCACAATAGGTGGCTTGGAACATAGTAAAGAAACCGTGAGTCTTGTGGGGTaGAAGGGGGCAGCTCGATCT | + |
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Preference number: 2 (lower is better) Translates to: HPRMECPTIGGLEHSKETVSLVG*KGAARS Trigger: AGATCGAGCTGCCCCCTTCCACCCCACAAGACTCAC...GGTTTCTTTACTATGTTCCAAGCCACCTATTGTGGGACACTCCATCCTAGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | CTACGTGGCAGCGCAGGCATAAACACACATGCAAACACACACACACACACACACTACCACAGAAGTACCTaGGCCTGGAGAGTTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LRGSAGINTHANTHTHTHYHRST*AWRVSK Trigger: CTTAGAAACTCTCCAGGCTCAGGTACTTCTGTGGTA...GTGTGTGTGTGTGTGTGTGTTTGCATGTGTGTTTATGCCTGCGCTGCCACGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGTTTATGTGTGTATCCCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCAGGAAGGGCCTAGTGTaGCTCAAACTCAAACAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PCLCVYPIRPGTQKCYPSRKGLV*LKLKQG Trigger: GCCTTGTTTGAGTTTGAGTCACACTAGGCCCTTCCT...GGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGGGATACACACATAAACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGCCTGGGCAAAGAGGTGCTATCTTACTTTGCCACACTTCTGAATACAGAGGTGAGTCTTGTGGGGTaGAAGGGGGCAGCTCGATCT | + |
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Preference number: 2 (lower is better) Translates to: FSLGKEVLSYFATLLNTEVSLVG*KGAARS Trigger: AGATCGAGCTGCCCCCTTCCACCCCACAAGACTCAC...CTCTGTATTCAGAAGTGTGGCAAAGTAAGATAGCACCTCTTTGCCCAGGCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAGGACCAATACACAAGCACAGGAGTCAGCAACACTGATGGGAACCAAGACTTTGCCACACTTCTaGATACAGAGGACCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: HRRTNTQAQESATLMGTKTLPHF*IQRTHP Trigger: AGGATGGGTCCTCTGTATTCAGAAGTGTGGCAAAGT...CTTGGTTCCCATCAGTGTTGCTGACTCCTGTGCTTGTGTATTGGTCCTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACAAGGCCCTCCTGCCTACGTGGCAGCGCAGGCATAAACACACATGCAAACGGTGCTATCTTACTTTaGCACACTTCTGAATACAGA | + |
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Preference number: 2 (lower is better) Translates to: QTRPSCLRGSAGINTHANGAILL*HTSEYR Trigger: TCTGTATTCAGAAGTGTGGCAAAGTAAGATAGCACC...GTTTGCATGTGTGTTTATGCCTGCGCTGCCACGTAGGCAGGAGGGCCTTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCTAGGATGGAGTGTCCCACAATAGGTGGCTTGGAACATAGTAAAGAAACCGCCTGGGCAAAGAGGTaGTATCTTACTTTGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: HPRMECPTIGGLEHSKETAWAKR*YLTLPH Trigger: GTGTGGCAAAGTAAGATAGCACCTCTTTGCCCAGGC...GGTTTCTTTACTATGTTCCAAGCCACCTATTGTGGGACACTCCATCCTAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGTTTATGTGTGTATCCCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCCTAGCAACAGGCTCATaGTTGTCTCAGCAACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PCLCVYPIRPGTQKCYPSLATGS*LSQQPR Trigger: TCTTGGTTGCTGAGACAACCATGAGCCTGTTGCTAG...GGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGGGATACACACATAAACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAATCCACGATGCTTTCCCAGGATAAGCCCCCGCGTAGACCTTCTGGACCAAGAGCCACAGGCCCCTaGGCTGACTCATCCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: RESTMLSQDKPPRRPSGPRATGP*ADSSPS Trigger: GGAGGGGGATGAGTCAGCCAAGGGGCCTGTGGCTCT...TGGTCCAGAAGGTCTACGCGGGGGCTTATCCTGGGAAAGCATCGTGGATTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CAA 90 bp | GACACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGAGAGCCACAGGCCCCTaGGCTGACTCATCCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: DTMVQPHFHTGSSGIPEGRATGP*ADSSPS Trigger: GGAGGGGGATGAGTCAGCCAAGGGGCCTGTGGCTCT...CCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CCA 72 bp | GACAGCAGGGAGCCAGGCAGCATCAGATCTATTGACTaGCAGGCGCACACACATGAAAGAGGCCTCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: DSREPGSIRSID*QAHTHERGLWT Trigger: TGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR GCA 72 bp | GGGCCTAGTGTGACTCAAACTCAAACAAGGCCCTCCTaGCTACGTGGCAGCGCAGGCATAAACACACATGCA | + |
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Preference number: 3 (lower is better) Translates to: GPSVTQTQTRPS*LRGSAGINTHA Trigger: TGCATGTGTGTTTATGCCTGCGCTGCCACGTAGGCAGGAGGGCCTTGTTTGAGTTTGAGTCACACTAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CCA 72 bp | ATTGACTGGCAGGCGCACACACATGAAAGAGGCCTCTaGACACCATGGTCCAGCCCCACTTCCATACAGGAT | + |
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Preference number: 3 (lower is better) Translates to: IDWQAHTHERGL*TPWSSPTSIQD Trigger: ATCCTGTATGGAAGTGGGGCTGGACCATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR TCA 72 bp | GAAGGACCAATACACAAGCACAGGAGTCAGCAACACTaGTGGGAACCAAGACAGCAGGGAGCCAGGCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: EGPIHKHRSQQH*WEPRQQGARQH Trigger: ATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCCATCAGTGTTGCTGACTCCTGTGCTTGTGTATTGGTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR TCA 72 bp | CCAGAGGCTTTTACCTCTCATAGGAAGGGCCTAGTGTaGCTCAAACTCAAACAAGGCCCTCCTGCCTACGTG | + |
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Preference number: 3 (lower is better) Translates to: PEAFTSHRKGLV*LKLKQGPPAYV Trigger: CACGTAGGCAGGAGGGCCTTGTTTGAGTTTGAGTCACACTAGGCCCTTCCTATGAGAGGTAAAAGCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CCA 72 bp | CCTTCCTTACCCAGCTATTTCCTAGCAACAGGCTCATaGTTGTCTCAGCAACCAAGAGCTCCCAGAGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: PSLPSYFLATGS*LSQQPRAPRGL Trigger: GAGACCTCTGGGAGCTCTTGGTTGCTGAGACAACCATGAGCCTGTTGCTAGGAAATAGCTGGGTAAGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CAA 90 bp | CTGATGGGAACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTATTGACTGGCGGGAGCAGGTTACATTaGATAAGTCAAAGTCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LMGTKTAGSQAASDLLTGGSRLH*ISQSPP Trigger: GGGAGGACTTTGACTTATCAAATGTAACCTGCTCCC...GCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCCATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CAA 90 bp | GACACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGCCCACAATAGGTGGCTaGGAACATAGTAAAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: DTMVQPHFHTGSSGIPEGPTIGG*EHSKET Trigger: GGTTTCTTTACTATGTTCCAAGCCACCTATTGTGGG...CCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR GCA 72 bp | CTCCTGCCTACGTGGCAGCGCAGGCATAAACACACATaGAAACACACACACACACACACACACACATACACA | + |
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Preference number: 3 (lower is better) Translates to: LLPTWQRRHKHT*KHTHTHTHTYT Trigger: TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTTTGCATGTGTGTTTATGCCTGCGCTGCCACGTAGGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR-3UTR CAA 90 bp | CCATGTTTATGTGTGTATCCCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCCCCACAATAGGTGGCTaGGAACATAGTAAAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: PCLCVYPIRPGTQKCYPSPTIGG*EHSKET Trigger: GGTTTCTTTACTATGTTCCAAGCCACCTATTGTGGG...GGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGGGATACACACATAAACATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR TCA 90 bp | CCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCCACACCCTCCCCGACTCTCGCACCTGGCGGGGGCTaGCATCTACATCTGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: PSAQEPRNAILPTPSPTLAPGGG*HLHLHG Trigger: TCCATGCAGATGTAGATGTCAGCCCCCGCCAGGTGC...GAGAGTCGGGGAGGGTGTGGGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | GACTGGCAGGCGCACACACATGAAAGAGGCCTCTGGACACCATGGTCCAGCCCCCCCCAGCATGGAATCTaGGAAGCGAGTCAGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DWQAHTHERGLWTPWSSPPQHGI*EASQGL Trigger: GAGACCCTGACTCGCTTCCCAGATTCCATGCTGGGG...GGGGCTGGACCATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTC 61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050555.6 |
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| CDS-3UTR CCA 90 bp | CCCAACTCTAGCTCCTGGCTGCCCAGGACAGCCTTAGGCCTTCCTTACCCAGCTGCGGAGAAGTGCACCTaGCGGGGGCTGACATCTACA | + |
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Preference number: 4 (lower is better) Translates to: PNSSSWLPRTALGLPYPAAEKCT*RGLTST Trigger: TGTAGATGTCAGCCCCCGCCAGGTGCACTTCTCCGC...AGCTGGGTAAGGAAGGCCTAAGGCTGTCCTGGGCAGCCAGGAGCTAGAGTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | GACTGGCAGGCGCACACACATGAAAGAGGCCTCTGGACACCATGGTCCAGCCCCCAGTGCAGAAGAGGTTaGCTCGGAAGGTGTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: DWQAHTHERGLWTPWSSPQCRRG*LGRCPP Trigger: AGGTGGACACCTTCCGAGCCAACCTCTTCTGCACTG...GGGGCTGGACCATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGAGGTCTCAGAGGCCCAGCTAAGCCCAGAGGCTTTTACCTCTCATAGGACTTCAGGGAGTTCCTaGGGGCGGGAGGCCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LPEVSEAQLSPEAFTSHRTSGSS*GREAHS Trigger: AGAGTGGGCCTCCCGCCCCCAGGAACTCCCTGAAGT...CCTATGAGAGGTAAAAGCCTCTGGGCTTAGCTGGGCCTCTGAGACCTCTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR GCA 90 bp | AGAGAATCCACGATGCTTTCCCAGGATAAGCCCCCGCGTAGACCTTCTGGACCACTTCGAGCGGAGAAGTaGACCTGGCGGGGGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: RESTMLSQDKPPRRPSGPLRAEK*TWRGLT Trigger: TGTCAGCCCCCGCCAGGTGCACTTCTCCGCTCGAAG...TGGTCCAGAAGGTCTACGCGGGGGCTTATCCTGGGAAAGCATCGTGGATTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR GCA 90 bp | GCTCAACCCGCCAGAGCTCTGCTAGGTTTAGCCTGGGCAAAGAGGTGCTATCTTCTTCGAGCGGAGAAGTaGACCTGGCGGGGGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: AQPARALLGLAWAKRCYLLRAEK*TWRGLT Trigger: TGTCAGCCCCCGCCAGGTGCACTTCTCCGCTCGAAG...AAGATAGCACCTCTTTGCCCAGGCTAAACCTAGCAGAGCTCTGGCGGGTTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR GCA 90 bp | CCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCCACACCCTCCCCGACTCTCGACACTCAGGGTCAGTaGAGAAGAGGTTGGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: PSAQEPRNAILPTPSPTLDTQGQ*RRGWLG Trigger: TCCGAGCCAACCTCTTCTGCACTGACCCTGAGTGTC...GAGAGTCGGGGAGGGTGTGGGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR TCA 90 bp | GACACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGGCACCTGGCGGGGGCTaGCATCTACATCTGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: DTMVQPHFHTGSSGIPEGAPGGG*HLHLHG Trigger: TCCATGCAGATGTAGATGTCAGCCCCCGCCAGGTGC...CCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CAA 72 bp | ACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTATaGACTGGCAGGCGCACACACATGAAAGAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TKTAGSQAASDL*TGRRTHMKEAS Trigger: AGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR GCA 90 bp | ACACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGAGACACTCAGGGTCAGTaGAGAAGAGGTTGGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: TPWSSPTSIQDPLEFQKGDTQGQ*RRGWLG Trigger: TCCGAGCCAACCTCTTCTGCACTGACCCTGAGTGTC...TCCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | ACACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGACTGCCCTGTCCCCAATaGCCACACCAAATCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: TPWSSPTSIQDPLEFQKGLPCPQ*PHQICC Trigger: GCAACAGATTTGGTGTGGCCATTGGGGACAGGGCAG...TCCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | ACCATGGTCCAGCCCCACTTCCATACAGGATCCTCTGGAATTCCAGAAGGGAGCACATCTACATCTGCATaGAGTAGGGCGGCTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TMVQPHFHTGSSGIPEGSTSTSA*SRAAVD Trigger: ATCCACAGCCGCCCTACTCCATGCAGATGTAGATGT...GCTCCCTTCTGGAATTCCAGAGGATCCTGTATGGAAGTGGGGCTGGACCATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | CTGATGGGAACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTATTGACTGGCACATCTACATCTGCATaGAGTAGGGCGGCTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LMGTKTAGSQAASDLLTGTSTSA*SRAAVD Trigger: ATCCACAGCCGCCCTACTCCATGCAGATGTAGATGT...GCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | CACCCTAGGATGGAGTGTCCCACAATAGGTGGCTTGGAACATAGTAAAGAAACCGCGGAGAAGTGCACCTaGCGGGGGCTGACATCTACA | + |
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Preference number: 4 (lower is better) Translates to: HPRMECPTIGGLEHSKETAEKCT*RGLTST Trigger: TGTAGATGTCAGCCCCCGCCAGGTGCACTTCTCCGC...GGTTTCTTTACTATGTTCCAAGCCACCTATTGTGGGACACTCCATCCTAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | CTACGTGGCAGCGCAGGCATAAACACACATGCAAACACACACACACACACACACCTGCCCTGTCCCCAATaGCCACACCAAATCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LRGSAGINTHANTHTHTHLPCPQ*PHQICC Trigger: GCAACAGATTTGGTGTGGCCATTGGGGACAGGGCAG...GTGTGTGTGTGTGTGTGTGTTTGCATGTGTGTTTATGCCTGCGCTGCCACGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTATCTTACTTTGCCACACTTCTGAATACAGAGGACCCATCCTCAAGCAAACTTCAGGGAGTTCCTaGGGGCGGGAGGCCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: GAILLCHTSEYRGPILKQTSGSS*GREAHS Trigger: AGAGTGGGCCTCCCGCCCCCAGGAACTCCCTGAAGT...TTGCTTGAGGATGGGTCCTCTGTATTCAGAAGTGTGGCAAAGTAAGATAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| 3UTR CAA 72 bp | TCCTTACCCAGCTATTTCCTAGCAACAGGCTCATGGTaGTCTCAGCAACCAAGAGCTCCCAGAGGTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLPSYFLATGSW*SQQPRAPRGLR Trigger: TCTGAGACCTCTGGGAGCTCTTGGTTGCTGAGACAACCATGAGCCTGTTGCTAGGAAATAGCTGGGTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CCA 90 bp | TTTAGCCTGGGCAAAGAGGTGCTATCTTACTTTGCCACACTTCTGAATACAGAGCAGTGCAGAAGAGGTTaGCTCGGAAGGTGTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: FSLGKEVLSYFATLLNTEQCRRG*LGRCPP Trigger: AGGTGGACACCTTCCGAGCCAACCTCTTCTGCACTG...CTCTGTATTCAGAAGTGTGGCAAAGTAAGATAGCACCTCTTTGCCCAGGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS CCA 90 bp | CGAGCGGAGAAGTGCACCTGGCGGGGGCTGACATCTACATCTGCATaGAGTAGGGCGGCTGTGGATGCAGGTGTACCCCGAGAGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RAEKCTWRGLTSTSA*SRAAVDAGVPREAS Trigger: GGAAGCCTCTCGGGGTACACCTGCATCCACAGCCGCCCTACTCCATGCAGATGTAGATGTCAGCCCCCGCCAGGTGCACTTCTCCGCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | GACTGGCAGGCGCACACACATGAAAGAGGCCTCTGGACACCATGGTCCAGCCCCCCTTGCGGGTTAAGGTaGGCTGGCATTAGGGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: DWQAHTHERGLWTPWSSPPCGLR*AGIRVS Trigger: TGACACCCTAATGCCAGCCAACCTTAACCCGCAAGG...GGGGCTGGACCATGGTGTCCAGAGGCCTCTTTCATGTGTGTGCGCCTGCCAGTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | CCCAACTCTAGCTCCTGGCTGCCCAGGACAGCCTTAGGCCTTCCTTACCCAGCTCCTTGCGGGTTAAGGTaGGCTGGCATTAGGGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: PNSSSWLPRTALGLPYPAPCGLR*AGIRVS Trigger: TGACACCCTAATGCCAGCCAACCTTAACCCGCAAGG...AGCTGGGTAAGGAAGGCCTAAGGCTGTCCTGGGCAGCCAGGAGCTAGAGTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | CCATCCGCCCAGGAACCCAGAAATGCTATCCTTCCCACACCCTCCCCGACTCTCGTAATGGCCATCTCCTaGCGGGTTAAGGTTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PSAQEPRNAILPTPSPTLVMAIS*RVKVGW Trigger: CCAGCCAACCTTAACCCGCAAGGAGATGGCCATTAC...GAGAGTCGGGGAGGGTGTGGGAAGGATAGCATTTCTGGGTTCCTGGGCGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS GCA 90 bp | CCACACCAAATCTGTTGCGCATGGCAGCCAGACACTCAGGGTCAGTaGAGAAGAGGTTGGCTCGGAAGGTGTCCACCTGGACAGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PHQICCAWQPDTQGQ*RRGWLGRCPPGQSS Trigger: TGAGCTCTGTCCAGGTGGACACCTTCCGAGCCAACCTCTTCTGCACTGACCCTGAGTGTCTGGCTGCCATGCGCAACAGATTTGGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS CCA 90 bp | GCGCACAAAGCGCAAGGATCTAGAGTTCAGAAGGTCTTCAGGGTCTaGGAAGACAGAGTCCAGGCGGAAGCCATGTTCCAGAGCCACCCG | + |
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Preference number: 5 (lower is better) Translates to: AHKAQGSRVQKVFRV*EDRVQAEAMFQSHP Trigger: CGGGTGGCTCTGGAACATGGCTTCCGCCTGGACTCTGTCTTCCCAGACCCTGAAGACCTTCTGAACTCTAGATCCTTGCGCTTTGTGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | CTGATGGGAACCAAGACAGCAGGGAGCCAGGCAGCATCAGATCTATTGACTGGCGTAATGGCCATCTCCTaGCGGGTTAAGGTTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LMGTKTAGSQAASDLLTGVMAIS*RVKVGW Trigger: CCAGCCAACCTTAACCCGCAAGGAGATGGCCATTAC...GCCAGTCAATAGATCTGATGCTGCCTGGCTCCCTGCTGTCTTGGTTCCCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTTCCTTACCCAGCTATTTCCTAGCAACAGGCTCATGGTTGTCTCAGCAATCAGTGCAGAAGAGGTaGGCTCGGAAGGTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: RPSLPSYFLATGSWLSQQSVQKR*ARKVST Trigger: GGTGGACACCTTCCGAGCCAACCTCTTCTGCACTGA...TTGCTGAGACAACCATGAGCCTGTTGCTAGGAAATAGCTGGGTAAGGAAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | CACCCTAGGATGGAGTGTCCCACAATAGGTGGCTTGGAACATAGTAAAGAAACCTCAGTGCAGAAGAGGTaGGCTCGGAAGGTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: HPRMECPTIGGLEHSKETSVQKR*ARKVST Trigger: GGTGGACACCTTCCGAGCCAACCTCTTCTGCACTGA...GGTTTCTTTACTATGTTCCAAGCCACCTATTGTGGGACACTCCATCCTAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTATCTTACTTTGCCACACTTCTGAATACAGAGGACCCATCCTCAAGCAAATGTGCCGGAAAGCCTaGCCATCCCTGTCGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: GAILLCHTSEYRGPILKQMCRKA*PSLSMK Trigger: CTTCATCGACAGGGATGGCAAGGCTTTCCGGCACAT...TTGCTTGAGGATGGGTCCTCTGTATTCAGAAGTGTGGCAAAGTAAGATAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS TCA 72 bp | GGCCCCTTCGAGCGGAGAAGTGCACCTGGCGGGGGCTaGCATCTACATCTGCATGGAGTAGGGCGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPFERRSAPGGG*HLHLHGVGRLW Trigger: CCACAGCCGCCCTACTCCATGCAGATGTAGATGTCAGCCCCCGCCAGGTGCACTTCTCCGCTCGAAGGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS CCA 72 bp | AAGTGCACCTGGCGGGGGCTGACATCTACATCTGCATaGAGTAGGGCGGCTGTGGATGCAGGTGTACCCCGA | + |
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Preference number: 6 (lower is better) Translates to: KCTWRGLTSTSA*SRAAVDAGVPR Trigger: TCGGGGTACACCTGCATCCACAGCCGCCCTACTCCATGCAGATGTAGATGTCAGCCCCCGCCAGGTGCACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS GCA 72 bp | ATCTGTTGCGCATGGCAGCCAGACACTCAGGGTCAGTaGAGAAGAGGTTGGCTCGGAAGGTGTCCACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ICCAWQPDTQGQ*RRGWLGRCPPG Trigger: TCCAGGTGGACACCTTCCGAGCCAACCTCTTCTGCACTGACCCTGAGTGTCTGGCTGCCATGCGCAACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050555.6 ENSMUST00000238978.2 |
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| CDS CCA 72 bp | GGTGTCAGCCCTAAACATGGCCCCCAGCATGGAATCTaGGAAGCGAGTCAGGGTCTCCAGTGTAGTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: GVSPKHGPQHGI*EASQGLQCSGI Trigger: TATTCCACTACACTGGAGACCCTGACTCGCTTCCCAGATTCCATGCTGGGGGCCATGTTTAGGGCTGACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050555.6 |
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