Pregenerated sensors for KCTD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001098Ensembl transcript IDs: ENSMUST00000001125.6, ENSMUST00000102581.11, ENSMUST00000134532.9
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGACCAGGGACTGTGGGTGGAGCCCTCTGGCCGGCACGCACTCTaGGGAGGGCTGATTACCAGCACTGAGCAGCAGGTATGGGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: HDQGLWVEPSGRHAL*GGLITSTEQQVWGL Trigger: GAGACCCCATACCTGCTGCTCAGTGCTGGTAATCAGCCCTCCCCAGAGTGCGTGCCGGCCAGAGGGCTCCACCCACAGTCCCTGGTCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR TCA 90 bp | GCCCTCTGGCCGGCACGCACTCTGGGGAGGGCTGATTACCAGCACTaGGCAGCAGGTATGGGGTCTCAGCCTCCAGAGAGGTCAAACGGT | + |
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Preference number: 1 (lower is better) Translates to: ALWPARTLGRADYQH*AAGMGSQPPERSNG Trigger: ACCGTTTGACCTCTCTGGAGGCTGAGACCCCATACCTGCTGCTCAGTGCTGGTAATCAGCCCTCCCCAGAGTGCGTGCCGGCCAGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR CCA 90 bp | CTGCCTGCTCAGAACACACCAGGGCCAGGCTGCTCAAGGACGCCTTaGTGGCCGGCTGCCAACTACGCAGTTCCTCCCAACTGCCAAACT | + |
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Preference number: 1 (lower is better) Translates to: LPAQNTPGPGCSRTP*WPAANYAVPPNCQT Trigger: AGTTTGGCAGTTGGGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | ACAGGAGAGCAAAGACTGCCTGCTCAGAACACACCAGGGCCAGGCTaGTCAAGGACGCCTTGGTGGCCGGCTGCCAACTACGCAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: TGEQRLPAQNTPGPG*SRTPWWPAANYAVP Trigger: AGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCTCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR CCA 90 bp | CCTGCTCAGAACACACCAGGGCCAGGCTGCTCAAGGACGCCTTGGTaGCCGGCTGCCAACTACGCAGTTCCTCCCAACTGCCAAACTAAG | + |
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Preference number: 1 (lower is better) Translates to: PAQNTPGPGCSRTPW*PAANYAVPPNCQTK Trigger: CTTAGTTTGGCAGTTGGGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | ACAAAACCGCACACAGAGCAGACTCACAGGAGAGCAAAGACTGCCTaGTCAGAACACACCAGGGCCAGGCTGCTCAAGGACGCCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: TKPHTEQTHRRAKTA*SEHTRARLLKDALV Trigger: CACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCTCCTGTGAGTCTGCTCTGTGTGCGGTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR CCA 90 bp | CTCCCACAGCAGGTGACAGAGAGCTGGGCCAGACCTGCCAGGCTGTaGGCCCCACAGACACTGAACTTGGTTACCATGAGCAAAAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: LPQQVTESWARPARL*APQTLNLVTMSKKL Trigger: TAGCTTTTTGCTCATGGTAACCAAGTTCAGTGTCTGTGGGGCCCACAGCCTGGCAGGTCTGGCCCAGCTCTCTGTCACCTGCTGTGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR GCA 90 bp | AGGACGCCTTGGTGGCCGGCTGCCAACTACGCAGTTCCTCCCAACTaGCAAACTAAGTCCTTGAGGGAGTGTCACCTAAGAGGCCCTAAT | + |
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Preference number: 1 (lower is better) Translates to: RTPWWPAANYAVPPN*QTKSLRECHLRGPN Trigger: ATTAGGGCCTCTTAGGTGACACTCCCTCAAGGACTTAGTTTGGCAGTTGGGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | CTGTACAAAACCGCACACAGAGCAGACTCACAGGAGAGCAAAGACTaGCTGCTCAGAACACACCAGGGCCAGGCTGCTCAAGGACGCCTT | + |
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Preference number: 1 (lower is better) Translates to: LYKTAHRADSQESKD*LLRTHQGQAAQGRL Trigger: AAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCTCCTGTGAGTCTGCTCTGTGTGCGGTTTTGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | ATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTGGTaGCAGTGTCTGCGGTCACCCCAGTTCCTAACCAAAGGGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ILQGNCCKLSGVLTW*QCLRSPQFLTKGQG Trigger: GCCTTGCCCTTTGGTTAGGAACTGGGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | ACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTaGAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGTCTGCGGTCA | + |
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Preference number: 1 (lower is better) Translates to: TQRYLHAHSILQGNC*KLSGVLTWCQCLRS Trigger: TGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | AAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTaGTGCAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGTCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: KTQRYLHAHSILQGN*CKLSGVLTWCQCLR Trigger: CCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR CCA 90 bp | TCTATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTaGTGCCAGTGTCTGCGGTCACCCCAGTTCCTAACCAAAGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SILQGNCCKLSGVLT*CQCLRSPQFLTKGQ Trigger: TTGCCCTTTGGTTAGGAACTGGGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR GCA 90 bp | CTGAACACAACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTaGAGGGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: LNTTRPKGICMPTLF*RETAANSVVSSPGA Trigger: GGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR TCA 90 bp | AGGCACCGTGGAATGTTCACTAGGTCTGTTCCTATCCCTGGGAGCTaGAGTACAAAGCTACAGGCACAAGGTTTGAGGATAGAGGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RHRGMFTRSVPIPGS*STKLQAQGLRIEEG Trigger: ACCTTCCTCTATCCTCAAACCTTGTGCCTGTAGCTTTGTACTTCAGCTCCCAGGGATAGGAACAGACCTAGTGAACATTCCACGGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGGCCCCAGAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGAAGGTGCCCCAAAGCCTaGACAGGGTCTGAGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: SKAPEGWAPGSHGRWDPRRCPKA*TGSEGA Trigger: CGCCCCCTCAGACCCTGTGCAGGCTTTGGGGCACCT...TCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTCTGGGGCCTTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCTGCTCAAGGACGCCTTGGTGGCCGGCTGCCAACTACGCAGTTCCTCCGTGTGCCTGCCATGCTaGGAACCAGGGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ARLLKDALVAGCQLRSSSVCLPC*EPGRGQ Trigger: CTGGCCTCTCCCTGGTTCTCAGCATGGCAGGCACAC...GGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCAGGCTGCTCAAGGACGCCTTGGTGGCCGGCTGCCAACTACGCAGTTCAGTGGTGTCCTCACCTaGTGCCAGTGTCTGCGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QGQAAQGRLGGRLPTTQFSGVLT*CQCLRS Trigger: TGACCGCAGACACTGGCACCAGGTGAGGACACCACT...GAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR CAA 90 bp | ACTGCCTGCTCAGAACACACCAGGGCCAGGCTGCTCAAGGACGCCTaGGTGGCCGGCTGCCAACTACGCAGTTCCTCCCAACTGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TACSEHTRARLLKDA*VAGCQLRSSSQLPN Trigger: GTTTGGCAGTTGGGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGACCCCAGACACAGCATGTTCAGAAGGGGTGCACACCCGGGCCAACACAAGACTCCAGGGGAAGTaGGAGGTGCCCCAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGTPDTACSEGVHTRANTRLQGK*EVPQSL Trigger: CAGGCTTTGGGGCACCTCCCACTTCCCCTGGAGTCT...TGTGTTGGCCCGGGTGTGCACCCCTTCTGAACATGCTGTGTCTGGGGTCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCTCAAGGACGCCTTGGTGGCCGGCTGCCAACTACGCAGTTCCTCCCAAAGACTCCAGGGGAAGTaGGAGGTGCCCCAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RLLKDALVAGCQLRSSSQRLQGK*EVPQSL Trigger: CAGGCTTTGGGGCACCTCCCACTTCCCCTGGAGTCT...TTGGGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCAACTGCCAGGAATCGGTCTGCTCCCAGCCTGGAGTGTGCCTGCCATGCATGTTCAGAAGGGGTaGACACCCGGGCCAACACAG | + |
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Preference number: 2 (lower is better) Translates to: SSQLPGIGLLPAWSVPAMHVQKG*TPGPTQ Trigger: CTGTGTTGGCCCGGGTGTGCACCCCTTCTGAACATG...CATGGCAGGCACACTCCAGGCTGGGAGCAGACCGATTCCTGGCAGTTGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | CGAGAGAGCAGCCAACTGCCAGGAATCGGTCTGCTCCCAGCCTGGAGTGTGCCTAGCCTGGAGTGTGCCTaGCATGCTGAGAACCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RESSQLPGIGLLPAWSVPSLECA*HAENQG Trigger: TCCCTGGTTCTCAGCATGGCAGGCACACTCCAGGCT...AGGCACACTCCAGGCTGGGAGCAGACCGATTCCTGGCAGTTGGCTGCTCTCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGTCTGCGGTCACCCCAGTTCCTCTGGGCGCTTGATATaGATCCTCCTCACGCGCTCG | + |
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Preference number: 2 (lower is better) Translates to: ANSVVSSPGASVCGHPSSSGRLI*ILLTRS Trigger: CGAGCGCGTGAGGAGGATCCATATCAAGCGCCCAGA...GGAACTGGGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGTCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATGCCGCTCACTGGTGGAGGTaGGCCCGGTCATCTGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: AVTHTSPEHNKTQRYLHAAHWWR*ARSSGR Trigger: GCGCCCAGATGACCGGGCCCACCTCCACCAGTGAGC...GGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGACCTGCCAGGCTGTGGGCCCCACAGACACTGAACTTGGTTACCATGAGCCTGCAGGGAAACTGCTaGAAACTCAGTGGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ARPARLWAPQTLNLVTMSLQGNC*KLSGVL Trigger: GAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAG...GCTCATGGTAACCAAGTTCAGTGTCTGTGGGGCCCACAGCCTGGCAGGTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR-3UTR TCA 90 bp | GGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGGTGTGCCTGCCATGCTaGGAACCAGGGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GICMPTLFCRETAANSVVVCLPC*EPGRGQ Trigger: CTGGCCTCTCCCTGGTTCTCAGCATGGCAGGCACAC...CACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGTCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATAGGTGCCCCAAAGCCTaGACAGGGTCTGAGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: PAVTHTSPEHNKTQRYLHRCPKA*TGSEGA Trigger: CGCCCCCTCAGACCCTGTGCAGGCTTTGGGGCACCT...ATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGACTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGTCCTACACCAGGGCCAGGCTaGTCAAGGACGCCTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SACPLYSAGKLLQTQWCPTPGPG*SRTPWW Trigger: CCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGT...AGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGTCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATATGAGAACGTCCAGCTaGCCCGCCCGTGGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PAVTHTSPEHNKTQRYLHMRTSS*PARGLQ Trigger: CTGGAGGCCACGGGCGGGGCAGCTGGACGTTCTCAT...ATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGACTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCAACACTTCCTTTATCAAGCAGCCAAATCCATCCCACACTCTCACCTAACCGCAGGGTGCTCGGCCTaGTCACTGGTGGAGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SQHFLYQAAKSIPHSHLTAGCSA*SLVEVG Trigger: GCCCACCTCCACCAGTGAGCAGGCCGAGCACCCTGC...GGTTAGGTGAGAGTGTGGGATGGATTTGGCTGCTTGATAAAGGAAGTGTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCAAAGGCCCCAGAAGGCTaGGCTCCAGGCTCTCACGGG | + |
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Preference number: 2 (lower is better) Translates to: TRPKGICMPTLFCRETAAKAPEG*APGSHG Trigger: CCCGTGAGAGCCTGGAGCCCAGCCTTCTGGGGCCTT...TGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCAGGGGAAGTGGGAGGTaGCCCAAAGCCTGCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: NKTQRYLHAHSILQGNCCRGSGR*PKACTG Trigger: CCCTGTGCAGGCTTTGGGGCACCTCCCACTTCCCCT...GCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | TCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATGCCCACTACACCAGGGCCAGGCTaGTCAAGGACGCCTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SHTHPLNTTRPKGICMPTTPGPG*SRTPWW Trigger: CCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGT...AGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCCACTCTATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTGAGCCTGGAGTGTGCCTaGCATGCTGAGAACCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CPLYSAGKLLQTQWCPHLSLECA*HAENQG Trigger: TCCCTGGTTCTCAGCATGGCAGGCACACTCCAGGCT...CAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | GCAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGTCTGCGGTCACCCCAGTTCCGAGAAAAGGAAGCCATaGAAGAGAGGAGTAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: ANSVVSSPGASVCGHPSSEKRKP*KRGVDP Trigger: AGGGTCTACTCCTCTCTTGCATGGCTTCCTTTTCTC...GGAACTGGGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGAATGTTCACTAGGTCTGTTCCTATCCCTGGGAGCTGAAGTACAAAGCTACAAGGCCCCAGAAGGCTaGGCTCCAGGCTCTCACGGG | + |
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Preference number: 2 (lower is better) Translates to: VECSLGLFLSLGAEVQSYKAPEG*APGSHG Trigger: CCCGTGAGAGCCTGGAGCCCAGCCTTCTGGGGCCTT...GTAGCTTTGTACTTCAGCTCCCAGGGATAGGAACAGACCTAGTGAACATTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR-3UTR GCA 90 bp | AGCCAACACTTCCTTTATCAAGCAGCCAAATCCATCCCACACTCTCACCTAACCAGGGGAAGTGGGAGGTaGCCCAAAGCCTGCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: SQHFLYQAAKSIPHSHLTRGSGR*PKACTG Trigger: CCCTGTGCAGGCTTTGGGGCACCTCCCACTTCCCCT...GGTTAGGTGAGAGTGTGGGATGGATTTGGCTGCTTGATAAAGGAAGTGTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATGCCGTCCCCCTTCCACTGTaGCCAAGGGGCTCTGTACAA | + |
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Preference number: 2 (lower is better) Translates to: AVTHTSPEHNKTQRYLHAVPLPL*PRGSVQ Trigger: TTGTACAGAGCCCCTTGGGCACAGTGGAAGGGGGAC...GGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCATCAAGGACGCCTTGGTaGCCGGCTGCCAACTACGCA | + |
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Preference number: 2 (lower is better) Translates to: TRPKGICMPTLFCRETAASRTPW*PAANYA Trigger: TGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGA...TGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTCCTCGGCCATCCTGGGCCTCGTACAGCAAGATATTCAGGGTCTCCTCACAGTGGCGTAGACGATaGAGGTACAACAGACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SGPRPSWASYSKIFRVSSQWRRR*RYNRLQ Trigger: CTGAAGTCTGTTGTACCTCCATCGTCTACGCCACTG...TGAGGAGACCCTGAATATCTTGCTGTACGAGGCCCAGGATGGCCGAGGACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTGGTGCCACAGGAGAGCAAAGACTaGCTGCTCAGAACACACCAG | + |
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Preference number: 2 (lower is better) Translates to: LYSAGKLLQTQWCPHLVPQESKD*LLRTHQ Trigger: CTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCTCCTG...TGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCAACACTTCCTTTATCAAGCAGCCAAATCCATCCCACACTCTCACCTAACCAGAGCAAAGACTGCCTaGTCAGAACACACCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SQHFLYQAAKSIPHSHLTRAKTA*SEHTRA Trigger: GGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCT...GGTTAGGTGAGAGTGTGGGATGGATTTGGCTGCTTGATAAAGGAAGTGTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGTCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATCTGCCCCTTCCTGGATaGGGTACATCAAAAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PAVTHTSPEHNKTQRYLHLPLPG*GTSKGL Trigger: CAGTCCTTTTGATGTACCCCATCCAGGAAGGGGCAG...ATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGACTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGCTCTTAATACAAAAGTCTACCCCATACATGGTTCCTCGATCCAGTCGGAGAGCAAAGACTGCCTaGTCAGAACACACCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SWLLIQKSTPYMVPRSSRRAKTA*SEHTRA Trigger: GGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCT...CCGACTGGATCGAGGAACCATGTATGGGGTAGACTTTTGTATTAAGAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR CAA 90 bp | TTCCTTTATCAAGCAGCCAAATCCATCCCACACTCTCACCTAACCTaGAAACTAGTCTACTCAGCCACGACTCCTCTGCGCAAAGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FLYQAAKSIPHSHLT*KLVYSATTPLRKAD Trigger: GTCTGCTTTGCGCAGAGGAGTCGTGGCTGAGTAGACTAGTTTCAAGGTTAGGTGAGAGTGTGGGATGGATTTGGCTGCTTGATAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGAACACAACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAATGCCCACTCTATTCTaGAGGGAAACTGCTGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LNTTRPKGICMPTLFCREMPTLF*RETAAN Trigger: GTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCAT...TTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACACACACATCCCCTGAACACAACAAGACCCAAAGGTATCTGCATGCCCACTTATCGTCAGAATTGCTaGTGTAGGAGTACTTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHTHPLNTTRPKGICMPTYRQNC*CRSTCC Trigger: ACAACAAGTACTCCTACACCAGCAATTCTGACGATA...AGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAATGTTCACTAGGTCTGTTCCTATCCCTGGGAGCTGAAGTACAAAGCTACTACACAGTGTATACATaGCTTCTCCATTCCTATAGA | + |
|
Preference number: 2 (lower is better) Translates to: VECSLGLFLSLGAEVQSYYTVYT*LLHSYR Trigger: TCTATAGGAATGGAGAAGCCATGTATACACTGTGTA...GTAGCTTTGTACTTCAGCTCCCAGGGATAGGAACAGACCTAGTGAACATTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR-3UTR CCA 90 bp | AATACTGCAACAAAGGTTCTCACATACACGCCAAACTCATTCATACGTTTTCCTCAGGGAACTCAACCTTaGTCTGCTTCTTCTCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: NTATKVLTYTPNSFIRFPQGTQP*SASSQW Trigger: CCACTGAGAAGAAGCAGACCAAGGTTGAGTTCCCTG...AGGAAAACGTATGAATGAGTTTGGCGTGTATGTGAGAACCTTTGTTGCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
||
| 3UTR CCA 72 bp | TGGTGGAGGTGGGCCCGGTCATCTGGGCGCTTGATATaGATCCTCCTCACGCGCTCGATCCGCTCCCGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WWRWARSSGRLI*ILLTRSIRSRS Trigger: GGAGCGGGAGCGGATCGAGCGCGTGAGGAGGATCCATATCAAGCGCCCAGATGACCGGGCCCACCTCCACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
||
| 3UTR TCA 72 bp | CTCACTGGTGGAGGTGGGCCCGGTCATCTGGGCGCTTaGTATGGATCCTCCTCACGCGCTCGATCCGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTGGGGPGHLGA*YGSSSRARSAP Trigger: GGGAGCGGATCGAGCGCGTGAGGAGGATCCATATCAAGCGCCCAGATGACCGGGCCCACCTCCACCAGTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
||
| 3UTR CCA 72 bp | GGACTGTGGGTGGAGCCCTCTGGCCGGCACGCACTCTaGGGAGGGCTGATTACCAGCACTGAGCAGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: GLWVEPSGRHAL*GGLITSTEQQV Trigger: TACCTGCTGCTCAGTGCTGGTAATCAGCCCTCCCCAGAGTGCGTGCCGGCCAGAGGGCTCCACCCACAGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR TCA 72 bp | CCGGCACGCACTCTGGGGAGGGCTGATTACCAGCACTaGGCAGCAGGTATGGGGTCTCAGCCTCCAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PARTLGRADYQH*AAGMGSQPPER Trigger: CCTCTCTGGAGGCTGAGACCCCATACCTGCTGCTCAGTGCTGGTAATCAGCCCTCCCCAGAGTGCGTGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR TCA 72 bp | TGGAGCCCTCTGGCCGGCACGCACTCTGGGGAGGGCTaGTTACCAGCACTGAGCAGCAGGTATGGGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: WSPLAGTHSGEG*LPALSSRYGVS Trigger: TGAGACCCCATACCTGCTGCTCAGTGCTGGTAATCAGCCCTCCCCAGAGTGCGTGCCGGCCAGAGGGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR GCA 72 bp | CAAAGACTGCCTGCTCAGAACACACCAGGGCCAGGCTaGTCAAGGACGCCTTGGTGGCCGGCTGCCAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: QRLPAQNTPGPG*SRTPWWPAANY Trigger: GTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | GCCAGGAATCGGTCTGCTCCCAGCCTGGAGTGTGCCTaGCATGCTGAGAACCAGGGAGAGGCCAGAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ARNRSAPSLECA*HAENQGEARST Trigger: TGTGCTTCTGGCCTCTCCCTGGTTCTCAGCATGGCAGGCACACTCCAGGCTGGGAGCAGACCGATTCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR CCA 72 bp | CAGGTGACAGAGAGCTGGGCCAGACCTGCCAGGCTGTaGGCCCCACAGACACTGAACTTGGTTACCATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QVTESWARPARL*APQTLNLVTMS Trigger: GCTCATGGTAACCAAGTTCAGTGTCTGTGGGGCCCACAGCCTGGCAGGTCTGGCCCAGCTCTCTGTCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR CCA 72 bp | CCTCACGCCAGTGTTTGGAATCCGGAAGCAGAGCTTTaGAGACTGACGCTGGGTCAGGCCCTAGCTGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: PHASVWNPEAEL*RLTLGQALAGL Trigger: GAGTCCAGCTAGGGCCTGACCCAGCGTCAGTCTCCAAAGCTCTGCTTCCGGATTCCAAACACTGGCGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGCTGCTCAAGGACGCCTTGGTGGCCGGCTGCCAACTACGCAGTTCCTCCTGCCAAACTAAGTCCTaGAGGGAGTGTCACCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARLLKDALVAGCQLRSSSCQTKS*RECHLR Trigger: TCTTAGGTGACACTCCCTCAAGGACTTAGTTTGGCA...GGAGGAACTGCGTAGTTGGCAGCCGGCCACCAAGGCGTCCTTGAGCAGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | CACACAGAGCAGACTCACAGGAGAGCAAAGACTGCCTaGTCAGAACACACCAGGGCCAGGCTGCTCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HTEQTHRRAKTA*SEHTRARLLKD Trigger: GTCCTTGAGCAGCCTGGCCCTGGTGTGTTCTGAGCAGGCAGTCTTTGCTCTCCTGTGAGTCTGCTCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR CCA 72 bp | CAGGGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTaGTGCCAGTGTCTGCGGTCACCCCAGTTCCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: QGNCCKLSGVLT*CQCLRSPQFLT Trigger: GGTTAGGAACTGGGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | GAGGTGGGACCCCAGACACAGCATGTTCAGAAGGGGTaGACACCCGGGCCAACACAGAAGCAATCTACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: EVGPQTQHVQKG*TPGPTQKQSTL Trigger: CAAAGTAGATTGCTTCTGTGTTGGCCCGGGTGTGCACCCCTTCTGAACATGCTGTGTCTGGGGTCCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR CCA 72 bp | CCACTCTATTCTGCAGGGAAACTGCTGCAAACTCAGTaGTGTCCTCACCTGGTGCCAGTGTCTGCGGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PLYSAGKLLQTQ*CPHLVPVSAVT Trigger: GGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | TGGTGGCCGGCTGCCAACTACGCAGTTCCTCCCAACTaGCAAACTAAGTCCTTGAGGGAGTGTCACCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: WWPAANYAVPPN*QTKSLRECHLR Trigger: TCTTAGGTGACACTCCCTCAAGGACTTAGTTTGGCAGTTGGGAGGAACTGCGTAGTTGGCAGCCGGCCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | GGAAACTGCTGCAAACTCAGTGGTGTCCTCACCTGGTaGCAGTGTCTGCGGTCACCCCAGTTCCTAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GNCCKLSGVLTW*QCLRSPQFLTK Trigger: TTTGGTTAGGAACTGGGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR CCA 72 bp | CTAGAAGTGCTGACTACTGCCCCTCACGCCAGTGTTTaGAATCCGGAAGCAGAGCTTTGGAGACTGACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEVLTTAPHASV*NPEAELWRLTL Trigger: CAGCGTCAGTCTCCAAAGCTCTGCTTCCGGATTCCAAACACTGGCGTGAGGGGCAGTAGTCAGCACTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR TCA 72 bp | GTCACACGTCCCACCAGCAGTCACACACACATCCCCTaGACACAACAAGACCCAAAGGTATCTGCATGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VTRPTSSHTHIP*TQQDPKVSACP Trigger: TGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGTGTGTGACTGCTGGTGGGACGTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | AGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTaGTGCAAACTCAGTGGTGTCCTCACCTGGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RYLHAHSILQGN*CKLSGVLTWCQ Trigger: CTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR TCA 72 bp | CAGTATGGTTTTCATAGTGCAGAGGCAGGAAGAGTGTaGTGTGCGTACATGACCAGGGACTGTGGGTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QYGFHSAEAGRV*CAYMTRDCGWS Trigger: GCTCCACCCACAGTCCCTGGTCATGTACGCACATCACACTCTTCCTGCCTCTGCACTATGAAAACCATACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR GCA 72 bp | TATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTaGAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YLHAHSILQGNC*KLSGVLTWCQC Trigger: ACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR GCA 72 bp | ACACATCCCCTGAACACAACAAGACCCAAAGGTATCTaGATGCCCACTCTATTCTGCAGGGAAACTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: THPLNTTRPKGI*MPTLFCRETAA Trigger: TGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAGGGGATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACACAACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAATCAGGGAACTCAACCTaGGTCTGCTTCTTCTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LNTTRPKGICMPTLFCRESGNST*VCFFSV Trigger: CACTGAGAAGAAGCAGACCAAGGTTGAGTTCCCTGA...TTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
||
| 3UTR TCA 72 bp | GGAATGTTCACTAGGTCTGTTCCTATCCCTGGGAGCTaGAGTACAAAGCTACAGGCACAAGGTTTGAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: GMFTRSVPIPGS*STKLQAQGLRI Trigger: TATCCTCAAACCTTGTGCCTGTAGCTTTGTACTTCAGCTCCCAGGGATAGGAACAGACCTAGTGAACATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR GCA 72 bp | GCTATTCTGGTTTATTTTAATTGTGAGCCCTTAGTGTaGAGTAAAAGTTCACTCTACACCAGCGACTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: AILVYFNCEPLV*SKSSLYTSDSL Trigger: TAGTGAGTCGCTGGTGTAGAGTGAACTTTTACTGCACACTAAGGGCTCACAATTAAAATAAACCAGAATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGACACAGCATGTTCAGCCGCTGGCACCGCTaGGCTCACCACGCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGWAPGSHGRWDPRHSMFSRWHR*AHHAVS Trigger: GGAGACAGCGTGGTGAGCTCAGCGGTGCCAGCGGCT...GAACATGCTGTGTCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGGACCCCAGACACAGCATGTTCAGAAGGGGTGCACACCCGGGCCAACACAAGCCGCTGGCACCGCTaGGCTCACCACGCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGTPDTACSEGVHTRANTSRWHR*AHHAVS Trigger: GGAGACAGCGTGGTGAGCTCAGCGGTGCCAGCGGCT...TGTGTTGGCCCGGGTGTGCACCCCTTCTGAACATGCTGTGTCTGGGGTCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGACACAGCATGTTCATGAGAACGTCCAGCTaGCCCGCCCGTGGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGWAPGSHGRWDPRHSMFMRTSS*PARGLQ Trigger: CTGGAGGCCACGGGCGGGGCAGCTGGACGTTCTCAT...GAACATGCTGTGTCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR CAA 72 bp | GCTCACTGGTGGAGGTGGGCCCGGTCATCTGGGCGCTaGATATGGATCCTCCTCACGCGCTCGATCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHWWRWARSSGR*IWILLTRSIRS Trigger: GGAGCGGATCGAGCGCGTGAGGAGGATCCATATCAAGCGCCCAGATGACCGGGCCCACCTCCACCAGTGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGACACAGCATGTTCAGCCTTCGCTGTCCGTaGGCACTTCCATGCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGWAPGSHGRWDPRHSMFSLRCP*ALPCVH Trigger: GTGGACGCATGGAAGTGCTCACGGACAGCGAAGGCT...GAACATGCTGTGTCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGACACAGCATGTTCCTTCCATGCGTCCACTaGACATGGCCTTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EGWAPGSHGRWDPRHSMFLPCVH*TWPSAW Trigger: CCATGCTGAAGGCCATGTTCAGTGGACGCATGGAAG...GAACATGCTGTGTCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGGACCCCAGACACAGCATGTTCAGAAGGGGTGCACACCCGGGCCAACACATCAGCTTCACGTACTTaGAGCTGGGGCTGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGTPDTACSEGVHTRANTSASRT*SWGWHP Trigger: AGGGTGCCAGCCCCAGCTCCAAGTACGTGAAGCTGA...TGTGTTGGCCCGGGTGTGCACCCCTTCTGAACATGCTGTGTCTGGGGTCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGCCCCAGAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGACAGGGAACTCAACCTTaGTCTGCTTCTTCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAPEGWAPGSHGRWDPRQGTQP*SASSQW Trigger: CCACTGAGAAGAAGCAGACCAAGGTTGAGTTCCCTG...TCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTCTGGGGCCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR GCA 90 bp | GCAGCCAACTGCCAGGAATCGGTCTGCTCCCAGCCTGGAGTGTGCCTGCCATGCTTCAGCATGGTGTCCTaGTTGGTGAGCGTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AANCQESVCSQPGVCLPCFSMVS*LVSVCM Trigger: CATGCAGACGCTCACCAAGCAGGACACCATGCTGAA...GCATGGCAGGCACACTCCAGGCTGGGAGCAGACCGATTCCTGGCAGTTGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGACCTGCCAGGCTGTGGGCCCCACAGACACTGAACTTGGTTACCATGAGCTCAGCTTCACGTACTTaGAGCTGGGGCTGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARPARLWAPQTLNLVTMSSASRT*SWGWHP Trigger: AGGGTGCCAGCCCCAGCTCCAAGTACGTGAAGCTGA...GCTCATGGTAACCAAGTTCAGTGTCTGTGGGGCCCACAGCCTGGCAGGTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTGGGCTCCAGGCTCTCACGGGAGGTGGGACCCCAGACACAGCATGTTCAGGATTGTCCCAAAGTaGTTCCCACAGCGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EGWAPGSHGRWDPRHSMFRIVPK*FPQRSM Trigger: CATTGACCGCTGTGGGAAGCACTTTGGGACAATCCT...GAACATGCTGTGTCTGGGGTCCCACCTCCCGTGAGAGCCTGGAGCCCAGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR CCA 90 bp | AACTGCTGCAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGTCTGCGGTCACCCGCACCAGGTAGTACTTaGCCTCGGCTAGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NCCKLSGVLTWCQCLRSPAPGST*PRLAAP Trigger: AGGAGCTGCTAGCCGAGGCCAAGTACTACCTGGTGC...GGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR TCA 90 bp | GCCAGAAGCACACTTCGTCCCCCTTCCACTGTGCCCAAGGGGCTCTGTACAAAACTTCCATGCGTCCACTaGACATGGCCTTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSTLRPPSTVPKGLCTKLPCVH*TWPSAW Trigger: CCATGCTGAAGGCCATGTTCAGTGGACGCATGGAAG...TTTTGTACAGAGCCCCTTGGGCACAGTGGAAGGGGGACGAAGTGTGCTTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
||
| CDS-3UTR CCA 90 bp | AACTGCTGCAAACTCAGTGGTGTCCTCACCTGGTGCCAGTGTCTGCGGTCACCCCAGTGGCGTAGACGATaGAGGTACAACAGACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NCCKLSGVLTWCQCLRSPQWRRR*RYNRLQ Trigger: CTGAAGTCTGTTGTACCTCCATCGTCTACGCCACTG...GGGTGACCGCAGACACTGGCACCAGGTGAGGACACCACTGAGTTTGCAGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCAAACTCAGTGGTGTCCTTCTGGGCGCTTGATATaGATCCTCCTCACGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SACPLYSAGKLLQTQWCPSGRLI*ILLTRS Trigger: CGAGCGCGTGAGGAGGATCCATATCAAGCGCCCAGA...AGGACACCACTGAGTTTGCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| 3UTR CAA 72 bp | TCTAGAAGTGCTGACTACTGCCCCTCACGCCAGTGTTaGGAATCCGGAAGCAGAGCTTTGGAGACTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSADYCPSRQC*ESGSRALETDA Trigger: AGCGTCAGTCTCCAAAGCTCTGCTTCCGGATTCCAAACACTGGCGTGAGGGGCAGTAGTCAGCACTTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
||
| CDS-3UTR GCA 90 bp | CTCGGCCATCCTGGGCCTCGTACAGCAAGATATTCAGGGTCTCCTCATAAATGCTTCAGCATGGTGTCCTaGTTGGTGAGCGTCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LGHPGPRTARYSGSPHKCFSMVS*LVSVCM Trigger: CATGCAGACGCTCACCAAGCAGGACACCATGCTGAA...GCATTTATGAGGAGACCCTGAATATCTTGCTGTACGAGGCCCAGGATGGCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134532.9 |
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| CDS-3UTR CCA 90 bp | GCCAGACCTGCCAGGCTGTGGGCCCCACAGACACTGAACTTGGTTACCATGAGCTATCGTCAGAATTGCTaGTGTAGGAGTACTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ARPARLWAPQTLNLVTMSYRQNC*CRSTCC Trigger: ACAACAAGTACTCCTACACCAGCAATTCTGACGATA...GCTCATGGTAACCAAGTTCAGTGTCTGTGGGGCCCACAGCCTGGCAGGTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| CDS-3UTR CCA 90 bp | TCTTGGCTCTTAATACAAAAGTCTACCCCATACATGGTTCCTCGATCCAGTCGGTTTTGTAGGGCGGCCTaGCACTCTTCCAGCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SWLLIQKSTPYMVPRSSRFCRAA*HSSSRP Trigger: GGGCCTGCTGGAAGAGTGCCAGGCCGCCCTACAAAA...CCGACTGGATCGAGGAACCATGTATGGGGTAGACTTTTGTATTAAGAGCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| CDS-3UTR TCA 90 bp | GGGTGCACACCCGGGCCAACACAGAAGCAATCTACTTTGTCAAGAAATAACAAATCCCACAGCGGTCAATaGGGATCCAGCCTTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GCTPGPTQKQSTLSRNNKSHSGQ*GSSLRC Trigger: ACAGCGAAGGCTGGATCCTCATTGACCGCTGTGGGA...TTTGTTATTTCTTGACAAAGTAGATTGCTTCTGTGTTGGCCCGGGTGTGCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| CDS-3UTR GCA 90 bp | AACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAAACTGCTGCGGGTCTCCTCATAAATaGGGGCTTCAGGGAACTCAA | + |
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Preference number: 4 (lower is better) Translates to: NKTQRYLHAHSILQGNCCGSPHK*GLQGTQ Trigger: TTGAGTTCCCTGAAGCCCGCATTTATGAGGAGACCC...GCAGCAGTTTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR CAA 72 bp | AGACCTGCCAGGCTGTGGGCCCCACAGACACTGAACTaGGTTACCATGAGCAAAAAGCTATTCTGGTTTATT | + |
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Preference number: 4 (lower is better) Translates to: RPARLWAPQTLN*VTMSKKLFWFI Trigger: AATAAACCAGAATAGCTTTTTGCTCATGGTAACCAAGTTCAGTGTCTGTGGGGCCCACAGCCTGGCAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| 3UTR CAA 72 bp | ACCCCATACATGGTTCCTCGATCCAGTCGGGATTGTTaGAGTATTTATCATAGGTTTTGTGTCAGATACAAG | + |
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Preference number: 4 (lower is better) Translates to: TPYMVPRSSRDC*SIYHRFCVRYK Trigger: CTTGTATCTGACACAAAACCTATGATAAATACTCAAACAATCCCGACTGGATCGAGGAACCATGTATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| CDS-3UTR CAA 90 bp | TCCTGGATGGGGTACATCAAAAGGACTGAGCCGAGAGAGCAGCCAACTGCCAGGTTCAGCTTCACGTACTaGGAGCTGGGGCTGGCACCC | + |
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Preference number: 5 (lower is better) Translates to: SWMGYIKRTEPREQPTARFSFTY*ELGLAP Trigger: GGGTGCCAGCCCCAGCTCCAAGTACGTGAAGCTGAA...CCTGGCAGTTGGCTGCTCTCTCGGCTCAGTCCTTTTGATGTACCCCATCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| CDS-3UTR CAA 90 bp | AGGGGCTCTGTACAAAACCGCACACAGAGCAGACTCACAGGAGAGCAAAGACTGCTGGGGCTGGCACCCTaGAAGGAAGTAGTGCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RGSVQNRTQSRLTGEQRLLGLAP*KEVVRV Trigger: CACCCGCACTACTTCCTTCAAGGGTGCCAGCCCCAG...CAGTCTTTGCTCTCCTGTGAGTCTGCTCTGTGTGCGGTTTTGTACAGAGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| CDS-3UTR CAA 90 bp | AGCCAACACTTCCTTTATCAAGCAGCCAAATCCATCCCACACTCTCACCTAACCCTGGGGCTGGCACCCTaGAAGGAAGTAGTGCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SQHFLYQAAKSIPHSHLTLGLAP*KEVVRV Trigger: CACCCGCACTACTTCCTTCAAGGGTGCCAGCCCCAG...GGTTAGGTGAGAGTGTGGGATGGATTTGGCTGCTTGATAAAGGAAGTGTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| CDS-3UTR CAA 90 bp | CTGAACACAACAAGACCCAAAGGTATCTGCATGCCCACTCTATTCTGCAGGGAATTCAGCTTCACGTACTaGGAGCTGGGGCTGGCACCC | + |
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Preference number: 5 (lower is better) Translates to: LNTTRPKGICMPTLFCREFSFTY*ELGLAP Trigger: GGGTGCCAGCCCCAGCTCCAAGTACGTGAAGCTGAA...TTCCCTGCAGAATAGAGTGGGCATGCAGATACCTTTGGGTCTTGTTGTGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102581.11 ENSMUST00000134532.9 |
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| CDS-3UTR CAA 90 bp | TCAACACCCATAAAAATAAATACTGCAACAAAGGTTCTCACATACACGCCAAACTCAGGGAACTCAACCTaGGTCTGCTTCTTCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: STPIKINTATKVLTYTPNSGNST*VCFFSV Trigger: CACTGAGAAGAAGCAGACCAAGGTTGAGTTCCCTGA...GTTTGGCGTGTATGTGAGAACCTTTGTTGCAGTATTTATTTTTATGGGTGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102581.11 |
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| CDS CAA 72 bp | GGCTTATTTGACGTCGCTATAAGCCTCTGTTCTTCCTaGGAGGATGTGATGACGGGTACCTTGCAGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GLFDVAISLCSS*EDVMTGTLQKG Trigger: GCCCTTCTGCAAGGTACCCGTCATCACATCCTCCAAGGAAGAACAGAGGCTTATAGCGACGTCAAATAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001125.6 ENSMUST00000102581.11 |
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