Pregenerated sensors for KCTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036225Ensembl transcript IDs: ENSMUST00000025992.7, ENSMUST00000168989.9, ENSMUST00000234864.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTCGCGGCTGTGCGGTGGACAAAAGTGCCAGTCCTGTACAGACTaGAGTCAGATGTCCTGTCTACCGCACGTCCCGTGTGGTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RSRLCGGQKCQSCTD*SQMSCLPHVPCGVL Trigger: GAGCACACCACACGGGACGTGCGGTAGACAGGACATCTGACTGCAGTCTGTACAGGACTGGCACTTTTGTCCACCGCACAGCCGCGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR GCA 90 bp | AGCATAAAAACAAAGGAAAGGTCGCGGCTGTGCGGTGGACAAAAGTaGCAGTCCTGTACAGACTGCAGTCAGATGTCCTGTCTACCGCAC | + |
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Preference number: 1 (lower is better) Translates to: SIKTKERSRLCGGQK*QSCTDCSQMSCLPH Trigger: GTGCGGTAGACAGGACATCTGACTGCAGTCTGTACAGGACTGGCACTTTTGTCCACCGCACAGCCGCGACCTTTCCTTTGTTTTTATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR CCA 90 bp | CCAAACGATCAGCATAAAAACAAAGGAAAGGTCGCGGCTGTGCGGTaGACAAAAGTGCCAGTCCTGTACAGACTGCAGTCAGATGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PNDQHKNKGKVAAVR*TKVPVLYRLQSDVL Trigger: CAGGACATCTGACTGCAGTCTGTACAGGACTGGCACTTTTGTCCACCGCACAGCCGCGACCTTTCCTTTGTTTTTATGCTGATCGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR-3UTR GCA 90 bp | TCCCTACCTGACCAGACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGGTGGAGACTGTCCTCCCTaGTCATGGCTTATTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: SLPDQTQNLHLQRNTSPGGDCPP*SWLIYW Trigger: CCAGTAAATAAGCCATGAGCAGGGAGGACAGTCTCC...ACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGTCTGGTCAGGTAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR-3UTR TCA 90 bp | ACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGGTGTTTTGTTTATTTGTGATGGCTGCTGGCAATaGAGCAGTAAGGAGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: TQNLHLQRNTSPGVLFICDGCWQ*SSKETV Trigger: GACAGTCTCCTTACTGCTTCATTGCCAGCAGCCATC...ACAAATAAACAAAACACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR-3UTR CCA 90 bp | ACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGGTGTTTTGTTTATTTGTTCATGGCTTATTTACTaGACAGAGACCTCAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TQNLHLQRNTSPGVLFICSWLIY*TETSEA Trigger: GGCCTCTGAGGTCTCTGTCCAGTAAATAAGCCATGA...ACAAATAAACAAAACACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR GCA 72 bp | CTGTGCGGTGGACAAAAGTGCCAGTCCTGTACAGACTaGAGTCAGATGTCCTGTCTACCGCACGTCCCGTGT | + |
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Preference number: 3 (lower is better) Translates to: LCGGQKCQSCTD*SQMSCLPHVPC Trigger: ACACGGGACGTGCGGTAGACAGGACATCTGACTGCAGTCTGTACAGGACTGGCACTTTTGTCCACCGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR GCA 72 bp | AGAGGCCCAGAACACCACGGTCATCACAGCACCCACTaGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: RGPEHHGHHSTH*VLSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACGCAGTGGGTGCTGTGATGACCGTGGTGTTCTGGGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR GCA 72 bp | ACAAAGGAAAGGTCGCGGCTGTGCGGTGGACAAAAGTaGCAGTCCTGTACAGACTGCAGTCAGATGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: TKERSRLCGGQK*QSCTDCSQMSC Trigger: ACAGGACATCTGACTGCAGTCTGTACAGGACTGGCACTTTTGTCCACCGCACAGCCGCGACCTTTCCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR CCA 72 bp | CAGCATAAAAACAAAGGAAAGGTCGCGGCTGTGCGGTaGACAAAAGTGCCAGTCCTGTACAGACTGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: QHKNKGKVAAVR*TKVPVLYRLQS Trigger: TGACTGCAGTCTGTACAGGACTGGCACTTTTGTCCACCGCACAGCCGCGACCTTTCCTTTGTTTTTATGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR TCA 72 bp | TTGAGTGGTTCTCTGAACTCCCTTCTGGTCCCTACCTaGCCAGACACAAAACCTCCACTTGCAAAGGAACAC | + |
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Preference number: 3 (lower is better) Translates to: LSGSLNSLLVPT*PDTKPPLAKEH Trigger: GTGTTCCTTTGCAAGTGGAGGTTTTGTGTCTGGTCAGGTAGGGACCAGAAGGGAGTTCAGAGAACCACTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| 3UTR GCA 72 bp | TCTGGTCCCTACCTGACCAGACACAAAACCTCCACTTaGAAAGGAACACCAGCCCAGGTGTTTTGTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: SGPYLTRHKTST*KGTPAQVFCLF Trigger: AAATAAACAAAACACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGTCTGGTCAGGTAGGGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| CDS-3UTR GCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCCCGCAGCAGCGGCGCTaGCGCCCGCGCTGGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPPQQRR*RPRWCY Trigger: GTAACACCAGCGCGGGCGGCAGCGCCGCTGCTGCGG...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| 3UTR CAA 72 bp | ATGTCCTGTCTACCGCACGTCCCGTGTGGTGTGCTCTaGAGTGGTTCTCTGAACTCCCTTCTGGTCCCTACC | + |
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Preference number: 4 (lower is better) Translates to: MSCLPHVPCGVL*SGSLNSLLVPT Trigger: GGTAGGGACCAGAAGGGAGTTCAGAGAACCACTCAAGAGCACACCACACGGGACGTGCGGTAGACAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| CDS-3UTR GCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTACGGGCCCCGCGCCCTaGTCCTCGAGCTTGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPTGPAP*SSSLRM Trigger: CATCCGCAAGCTCGAGGAGCAGGGCGCGGGGCCCGT...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCGGCCAGCGTCAGGTTaGCGCTGCGCAGCTCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPRPASG*RCAARG Trigger: ACCCCGAGCTGCGCAGCGCCAACCTGACGCTGGCCG...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | TCCCTACCTGACCAGACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGGTCCTGTTTTATCCGGATaGCTGAGGGTACTCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLPDQTQNLHLQRNTSPGPVLSG*LRVLGV Trigger: CACCCCGAGTACCCTCAGTCATCCGGATAAAACAGG...ACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGTCTGGTCAGGTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| CDS-3UTR GCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTGTGATGGCTTGCTTCTaGACCACGGGCCCCGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPVMACF*TTGPAP Trigger: GGGCGCGGGGCCCGTGGTGCAGAAGCAAGCCATCAC...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR GCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCTGACTCGTACAGCGTaGGCTTGGGCGCCGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPLTRTA*AWAPPR Trigger: CCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAG...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCGGCTGGGGGCGGTGGTaGTGGGAAGGATGGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPGWGRW*WEGWVG Trigger: TCCCACCCATCCTTCCCACCACCACCGCCCCCAGCC...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | GGTCCCTACCTGACCAGACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGTTGGATTTGGTGAGCTaGGCTGGAGTTGGAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: GPYLTRHKTSTCKGTPAQLDLVS*AGVGMP Trigger: AGGCATTCCAACTCCAGCTCAGCTCACCAAATCCAA...CTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGTCTGGTCAGGTAGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| CDS-3UTR GCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCACATCGCCCTCACTaGAGTGGTCCCGGGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPSHRPH*SGPGAA Trigger: AGCGGCCCCGGGACCACTGCAGTGAGGGCGATGTGA...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCAGCGAGGGCGGCTaGGGGCGGTGGTGGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCPSEGG*GRWWWE Trigger: TTCCCACCACCACCGCCCCCAGCCGCCCTCGCTGGG...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTGCGCCCCCTTGTCCATaGTCTCGAAGTCCGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPAPPCP*SRSPGS Trigger: AGAGCCCGGACTTCGAGACCATGGACAAGGGGGCGC...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAGGCGGCTGGGGGCGGTaGTGGTGGGAAGGATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKGGWGR*WWEGWV Trigger: CACCCATCCTTCCCACCACCACCGCCCCCAGCCGCC...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | TTATTTACTGGACAGAGACCTCAGAGGCCCAGAACACCACGGTCATCACAGCACGGACCTGAACTGAATTaGGGTGGCAGTAGCCGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LFTGQRPQRPRTPRSSQHGPELN*GGSSRL Trigger: TAAACGGCTACTGCCACCTCAATTCAGTTCAGGTCC...GTGCTGTGATGACCGTGGTGTTCTGGGCCTCTGAGGTCTCTGTCCAGTAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| CDS-3UTR TCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTACCCGCGATGCTGTTaGGTGTGGCGATGGACACCG | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPYPRCC*VWRWTP Trigger: CGGTGTCCATCGCCACACTCAACAGCATCGCGGGTA...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR GCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGCGTCAGGTTGGCGCTaGGCAGCTCGGGGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCASGWR*AARGPW Trigger: CCAAGGACCCCGAGCTGCGCAGCGCCAACCTGACGC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR GCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGCGCGCGTGATGGCTTaGTTCTGCACCACGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCARVMA*FCTTGP Trigger: GGGGCCCGTGGTGCAGAAGCAAGCCATCACGCGCGC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTATTTACTGGACAGAGACCTCAGAGGCCCAGAACACCACGGTCATCACAGCACGAGCTGAGCTGGAGTTaGAATGCCTTGGTTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LFTGQRPQRPRTPRSSQHELSWS*NALVVQ Trigger: CTGAACAACCAAGGCATTCCAACTCCAGCTCAGCTC...GTGCTGTGATGACCGTGGTGTTCTGGGCCTCTGAGGTCTCTGTCCAGTAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
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| CDS-3UTR CCA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATCGCTGCCGCCCGCGCTaGTGTTACAGTCCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FYSILGSELGLLSQLHTNRCRPR*CYSPRC Trigger: GCAGCGGGGACTGTAACACCAGCGCGGGCGGCAGCG...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGCACGGCGTAGCGGGTaGCCAGCCTGGTGTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCARRSG*PAWCSR Trigger: GCGAGAACACCAGGCTGGCCACCCGCTACGCCGTGC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGCTCGGGGTCCTTGGTaGGGTCGAGCGTGCGACAGT | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCARGPW*GRACDS Trigger: ACTGTCGCACGCTCGACCTCACCAAGGACCCCGAGC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAACCTCGAGCTTGCGGATaGCTGCGGCCAGCGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKPRACG*LRPASG Trigger: ACCTGACGCTGGCCGCAGTCATCCGCAAGCTCGAGG...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAGCAGGTCGGCGCGCGTaGTGGCTTGCTTCTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKAGRRA*WLASAP Trigger: TGGTGCAGAAGCAAGCCATCACGCGCGCCGACCTGC...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCGAACCAGACCTTGTTaGGCAGCCCAAAGGGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPRTRPC*AAQRAC Trigger: ACACGCCCTTTGGGCTGCTCAACAAGGTCTGGTTCG...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR GCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCGTCCCCCGTTATCTaGACCTCCTGGATCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPSSPVI*TSWISS Trigger: GGACGAGATCCAGGAGGTGCAGATAACGGGGGACGA...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR GCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGGTACTCCCGGAAGATaGGCACGGCGTAGCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCGTPGR*ARRSGW Trigger: CCACCCGCTACGCCGTGCGCATCTTCCGGGAGTACC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATAGCGGGTGGCCAGCCTaGTGTTCTCGCTCAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FYSILGSELGLLSQLHTNSGWPA*CSRSAG Trigger: CCCGGCTGAGCGAGAACACCAGGCTGGCCACCCGCT...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTTCGCCCTCACTGCAGTaGTCCCGGGGCCGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCSPSLQ*SRGRWK Trigger: TTTCCAGCGGCCCCGGGACCACTGCAGTGAGGGCGA...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCGTACAGCGTGCGCTTaGGCGCCGCCTCGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCRTACA*APPRTS Trigger: TGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACG...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR GCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCGTCGATGTGGACGGGTaGGTTGGATTTGGTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPVDVDG*VGFGEL Trigger: CAGCTCACCAAATCCAACGCACCCGTCCACATCGAC...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTGCGCTCTGGTCCATATaGATCATATGGACCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPALWSI*IIWTGS Trigger: GGAGCCGGTCCATATGATCCATATGGACCAGAGCGC...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCCAGCGCGGCGCTCTaGTCCATATGGATCATATGG | + |
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Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPSSAAL*SIWIIW Trigger: CCATATGATCCATATGGACCAGAGCGCCGCGCTGGA...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGACCGTCCTCGTCCATaGCCAGCCCGAAGGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCDRPRP*PARRSP Trigger: AGGACTCCTTCGGGCTGGCCATGGACGAGGACGGTC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCCTGATGACATGTGTTaGGTCGTGATTCCAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPPDDMC*VVIPAC Trigger: GCAGGCTGGAATCACGACTCAACACATGTCATCAGG...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
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| CDS-3UTR TCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCGGAGGACATATTCACTaGACTGGGACGAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPGGHIH*TGTSPL Trigger: GAGTGGACTCGTCCCAGTTCAGTGAATATGTCCTCC...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTTGCTTCGGTGCCCATTaGCTTCTGGAAGAAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPCFGAH*LLEEEA Trigger: TGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCA...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGAGCTTGCGGATGACTaGGGCCAGCGTCAGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYSILGSELGLLSQLHTNELADD*GQRQVG Trigger: GCCAACCTGACGCTGGCCGCAGTCATCCGCAAGCTC...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTGCGTGCAGAAGTACATaGACGTCTCGAACCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPACRST*TSRTRP Trigger: AGGTCTGGTTCGAGACGTGCATGTACTTCTGCACGC...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTCTTGGACAGCTTGGCTaGCTTGGACAGCATCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPLGQLG*LGQHLH Trigger: ATGCAGATGCTGTCCAAGGCAGCCAAGCTGTCCAAG...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTTGGTCCCGGGGCCGCTaGAAAAACGCCTTACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCWSRGR*KNALQR Trigger: CCTCTGTAAGGCGTTTTTCCAGCGGCCCCGGGACCA...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCACAGCATCTGCATCCTaGTGCCCAGCAAGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPTASAS*CPASSC Trigger: GCAAGAACTTGCTGGGCACCAGGATGCAGATGCTGT...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTAGGTCTTGGACAGCTTaGCTGCCTTGGACAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPRSWTA*LPWTAS Trigger: AGATGCTGTCCAAGGCAGCCAAGCTGTCCAAGACCT...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAACGTCGGGCCCGACCTaGCTGTCTTTGGGGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKTSGPT*LSLGRI Trigger: TATCCTCCCCAAAGACAGCCAGGTCGGGCCCGACGT...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | AGACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGGTGTTTTGTTTATTTCCTGATGACATGTGTTaGGTCGTGATTCCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHKTSTCKGTPAQVFCLFPDDMC*VVIPAC Trigger: GCAGGCTGGAATCACGACTCAACACATGTCATCAGG...AAATAAACAAAACACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATCGAAGTCCGGGCTCTaGGCCTTTTCGCTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKSKSGL*AFSLRY Trigger: GTACCTGAGCGAAAAGGCTCAGAGCCCGGACTTCGA...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAAGGGCGTGTTGGTGCTaGAGACGCTGGAGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKRACWC*RRWRCR Trigger: TCTACACCTCCAGCGTCTTCAGCACCAACACGCCCT...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCGGATACAAAGTCTTTTaGGGGAAGAAGGGCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPGYKVF*GKKGRR Trigger: TCTGCGGCCCTTCTTCCCCCAAAAGACTTTGTATCC...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCTGTTTTATCCGGATaGCTGAGGGTACTCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCPVLSG*LRVLGV Trigger: CACCCCGAGTACCCTCAGTCATCCGGATAAAACAGG...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGTCGATGTGGACGGGTaGGTTGGATTTGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCVDVDG*VGFGEL Trigger: CAGCTCACCAAATCCAACGCACCCGTCCACATCGAC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGCCTTGGACAGCATCTaGATCCTGGTGCCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FYSILGSELGLLSQLHTNALDSI*ILVPSK Trigger: CTTGCTGGGCACCAGGATGCAGATGCTGTCCAAGGC...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTGAATTGGTGCTTCGGTaGCCATTGACTTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SILGSELGLLSQLHTNVPELVLR*PLTSGR Trigger: TCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTC...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTTTGGTGAGCTGAGCTaGAGTTGGAATGCCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPFGELS*SWNALV Trigger: AACCAAGGCATTCCAACTCCAGCTCAGCTCACCAAA...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAGGAGGACATATTCACTaGACTGGGACGAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKGGHIH*TGTSPL Trigger: GAGTGGACTCGTCCCAGTTCAGTGAATATGTCCTCC...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATTCTCACGGCCTCGCGTaGAGAAGTACATGCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYSILGSELGLLSQLHTNSHGLA*RSTCTS Trigger: AGACGTGCATGTACTTCTGCACGCGAGGCCGTGAGA...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGCCCGTCTCGTACATaGGAGGCAAGTTCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKCPSRT*EASSLR Trigger: ACGAAGAGAACTTGCCTCGCATGTACGAGACGGGCA...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR GCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGCATCTGCATCCTGGTaGCCAGCAAGTTCTTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCASASW*PASSCL Trigger: TAGGCAAGAACTTGCTGGGCACCAGGATGCAGATGC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | AGACACAAAACCTCCACTTGCAAAGGAACACCAGCCCAGGTGTTTTGTTTATTTACATATTCACTGAACTaGGACGAGTCCACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHKTSTCKGTPAQVFCLFTYSLN*DESTPP Trigger: AGGAGGAGTGGACTCGTCCCAGTTCAGTGAATATGT...AAATAAACAAAACACCTGGGCTGGTGTTCCTTTGCAAGTGGAGGTTTTGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025992.7 |
||
| CDS-3UTR CCA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCGCAAGTTCTTGCCTATaGCTTTGTTCTCGTACCATG | + |
|
Preference number: 4 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPASSCL*LCSRTM Trigger: CATGGTACGAGAACAAAGCCATAGGCAAGAACTTGC...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTACATGTGTTGAGTCGTaGTTCCAGCCTGCATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCTCVES*FQPALT Trigger: GGTCAATGCAGGCTGGAATCACGACTCAACACATGT...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGGACCTGAACTGAATTaGGGTGGCAGTAGCCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCGPELN*GGSSRL Trigger: TAAACGGCTACTGCCACCTCAATTCAGTTCAGGTCC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAAAGGCCCAAGCGACTTaGAGTAAACGAACTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKKAQAT*SKRTCD Trigger: GTCGCAAGTTCGTTTACTTCAAGTCGCTTGGGCCTT...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAGAGCTGAGCTGGAGTTaGAATGCCTTGGTTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKELSWS*NALVVQ Trigger: CTGAACAACCAAGGCATTCCAACTCCAGCTCAGCTC...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATTTGGATTTGGTGAGCTaGGCTGGAGTTGGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FYSILGSELGLLSQLHTNLDLVS*AGVGMP Trigger: AGGCATTCCAACTCCAGCTCAGCTCACCAAATCCAA...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTTTTGGTGAGCTGAGCTaGAGTTGGAATGCCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCFGELS*SWNALV Trigger: AACCAAGGCATTCCAACTCCAGCTCAGCTCACCAAA...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 |
||
| CDS-3UTR CCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCAGGTGAAACTATGGTaGGAGAATTGGTGCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCQVKLW*ENWCFG Trigger: ACCGAAGCACCAATTCTCCCACCATAGTTTCACCTG...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR TCA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGGAAACAATAGCAGGTaGAACTATGGTGGGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCGNNSR*NYGGRI Trigger: AATTCTCCCACCATAGTTTCACCTGCTATTGTTTCC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | GGATCTCGTCCTCCTCCTCTTCCTCCTCCTCCTCCTCGCCCGCGCTaGAGTAATGCGGGCGGCCGTAGCGGCGGCCGCGGCCCCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRPPPLPPPPPRPR*SNAGGRSGGRGPRP Trigger: GGGCCGGGGGCCGCGGCCGCCGCTACGGCCGCCCGCATTACTGCAGCGCGGGCGAGGAGGAGGAGGAGGAAGAGGAGGAGGACGAGATCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 90 bp | GCTTCTGCACCACGGGCCCCGCGCCCTGCTCCTCGAGCTTGCGGATaGCTGCGGCCAGCGTCAGGTTGGCGCTGCGCAGCTCGGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASAPRAPRPAPRACG*LRPASGWRCAARGP Trigger: AGGACCCCGAGCTGCGCAGCGCCAACCTGACGCTGGCCGCAGTCATCCGCAAGCTCGAGGAGCAGGGCGCGGGGCCCGTGGTGCAGAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | CTGCACCACGGGCCCCGCGCCCTGCTCCTCGAGCTTGCGGATGACTaGGGCCAGCGTCAGGTTGGCGCTGCGCAGCTCGGGGTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHHGPRALLLELADD*GQRQVGAAQLGVLG Trigger: ACCAAGGACCCCGAGCTGCGCAGCGCCAACCTGACGCTGGCCGCAGTCATCCGCAAGCTCGAGGAGCAGGGCGCGGGGCCCGTGGTGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | TCAGGTACTCCCGGAAGATGCGCACGGCGTAGCGGGTGGCCAGCCTaGTGTTCTCGCTCAGCCGGGCCCGCTCGGGGCGCTGCAGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: SGTPGRCARRSGWPA*CSRSAGPARGAAAR Trigger: ACGTGCTGCAGCGCCCCGAGCGGGCCCGGCTGAGCGAGAACACCAGGCTGGCCACCCGCTACGCCGTGCGCATCTTCCGGGAGTACCTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | GGCGCCAACAGTCGTGGCGGCGCCTCGGGCTCCAGCGCGGCGCTCTaGTCCATATGGATCATATGGACCGGCTCCGGCTCCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GANSRGGASGSSAAL*SIWIIWTGSGSSSS Trigger: GGAGGAGCTGGAGCCGGAGCCGGTCCATATGATCCATATGGACCAGAGCGCCGCGCTGGAGCCCGAGGCGCCGCCACGACTGTTGGCGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | CCTTTTCGCTCAGGTACTCCCGGAAGATGCGCACGGCGTAGCGGGTaGCCAGCCTGGTGTTCTCGCTCAGCCGGGCCCGCTCGGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PFRSGTPGRCARRSG*PAWCSRSAGPARGA Trigger: AGCGCCCCGAGCGGGCCCGGCTGAGCGAGAACACCAGGCTGGCCACCCGCTACGCCGTGCGCATCTTCCGGGAGTACCTGAGCGAAAAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | AAGGGCCGCAGATTTCCCCTGACCCGAACACTGACTCGTACAGCGTaGGCTTGGGCGCCGCCTCGGACTTCACGTCGGGCCCGACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGRRFPLTRTLTRTA*AWAPPRTSRRARPG Trigger: GCCAGGTCGGGCCCGACGTGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAGTGTTCGGGTCAGGGGAAATCTGCGGCCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | TGGGCGCCGCCTCGGACTTCACGTCGGGCCCGACCTGGCTGTCTTTaGGGAGGATATAAGTGTTACCCAGCGAGGGCGGCTGGGGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WAPPRTSRRARPGCL*GGYKCYPARAAGGG Trigger: ACCGCCCCCAGCCGCCCTCGCTGGGTAACACTTATATCCTCCCCAAAGACAGCCAGGTCGGGCCCGACGTGAAGTCCGAGGCGGCGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 90 bp | GTGGTGGGAAGGATGGGTGGGAGCGTGGTGGGAGTGGTGACGAGCTaGCCCGTTCAGAGAGTCGGTATAGCAGCCCTGCGGGGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVGRMGGSVVGVVTS*PVQRVGIAALRGWG Trigger: TCCCCAGCCCCGCAGGGCTGCTATACCGACTCTCTGAACGGGTCAGCTCGTCACCACTCCCACCACGCTCCCACCCATCCTTCCCACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | CGAAGTCCGGGCTCTGAGCCTTTTCGCTCAGGTACTCCCGGAAGATaGGCACGGCGTAGCGGGTGGCCAGCCTGGTGTTCTCGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPGSEPFRSGTPGR*ARRSGWPAWCSRSA Trigger: GGCTGAGCGAGAACACCAGGCTGGCCACCCGCTACGCCGTGCGCATCTTCCGGGAGTACCTGAGCGAAAAGGCTCAGAGCCCGGACTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | CGCAGATTTCCCCTGACCCGAACACTGACTCGTACAGCGTGCGCTTaGGCGCCGCCTCGGACTTCACGTCGGGCCCGACCTGGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRFPLTRTLTRTACA*APPRTSRRARPGCL Trigger: AAGACAGCCAGGTCGGGCCCGACGTGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAGTGTTCGGGTCAGGGGAAATCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | CGGCATAGAAGGAGCGCAGCACGCGGCACAGCGCCCCCTTGTCCATaGTCTCGAAGTCCGGGCTCTGAGCCTTTTCGCTCAGGTACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RHRRSAARGTAPPCP*SRSPGSEPFRSGTP Trigger: GGGAGTACCTGAGCGAAAAGGCTCAGAGCCCGGACTTCGAGACCATGGACAAGGGGGCGCTGTGCCGCGTGCTGCGCTCCTTCTATGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 90 bp | TCCTCGTCCATGGCCAGCCCGAAGGAGTCCTCCTCCAGCTCGCGCTaGTTCTCACGGCCTCGCGTGCAGAAGTACATGCACGTCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSMASPKESSSSSR*FSRPRVQKYMHVSN Trigger: GTTCGAGACGTGCATGTACTTCTGCACGCGAGGCCGTGAGAACCAGCGCGAGCTGGAGGAGGACTCCTTCGGGCTGGCCATGGACGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTGCGGCCAGCGTCAGGTaGGCGCTGCGCAGCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SILGSELGLLSQLHTNVPAASVR*ALRSSG Trigger: CCCCGAGCTGCGCAGCGCCAACCTGACGCTGGCCGC...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 90 bp | TACTCCAGGACGAGGAACGCGACTTATGGTAAGGCCCAAGCGACTTaGAGTAAACGAACTTGCGACCGTCCTCGTCCATGGCCAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YSRTRNATYGKAQAT*SKRTCDRPRPWPAR Trigger: TCGGGCTGGCCATGGACGAGGACGGTCGCAAGTTCGTTTACTTCAAGTCGCTTGGGCCTTACCATAAGTCGCGTTCCTCGTCCTGGAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | ACTCAGTGCCCGTCTCGTACATGCGAGGCAAGTTCTCTTCGTCGCTaGTCTCCGCACGCTTCTTACTCCAGGACGAGGAACGCGACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TQCPSRTCEASSLRR*SPHASYSRTRNATY Trigger: ATAAGTCGCGTTCCTCGTCCTGGAGTAAGAAGCGTGCGGAGAGCAGCGACGAAGAGAACTTGCCTCGCATGTACGAGACGGGCACTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | AGGTCTTGGACAGCTTGGCTGCCTTGGACAGCATCTGCATCCTGGTaGCCAGCAAGTTCTTGCCTATGGCTTTGTTCTCGTACCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSWTAWLPWTASASW*PASSCLWLCSRTMS Trigger: TGACATGGTACGAGAACAAAGCCATAGGCAAGAACTTGCTGGGCACCAGGATGCAGATGCTGTCCAAGGCAGCCAAGCTGTCCAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 90 bp | GAAACAATAGCAGGTGAAACTATGGTGGGAGAATTGGTGCTTCGGTaGCCATTGACTTCTGGAAGAAGAGGCAGGGGGTCGTGTTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: ETIAGETMVGELVLR*PLTSGRRGRGSCFT Trigger: CGTGAAACACGACCCCCTGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTCTCCCACCATAGTTTCACCTGCTATTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATCGCAGCTCGGGGTCCTaGGTGAGGTCGAGCGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FYSILGSELGLLSQLHTNRSSGS*VRSSVR Trigger: TCGCACGCTCGACCTCACCAAGGACCCCGAGCTGCG...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTAGCCCAAAGGGCGTGTaGGTGCTGAAGACGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCSPKGV*VLKTLE Trigger: CTCCAGCGTCTTCAGCACCAACACGCCCTTTGGGCT...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTACTATGGTGGGAGAATaGGTGCTTCGGTGCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SILGSELGLLSQLHTNVPTMVGE*VLRCPL Trigger: CAATGGGCACCGAAGCACCAATTCTCCCACCATAGT...AGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTGTCTCGAACCAGACCTaGTTGAGCAGCCCAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFNFRFRAWFTVPAAHKCVSNQT*LSSPKG Trigger: GCCCTTTGGGCTGCTCAACAAGGTCTGGTTCGAGAC...ACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAATACCCGCGATGCTGTaGAGTGTGGCGATGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKIPAML*SVAMDT Trigger: GGTGTCCATCGCCACACTCAACAGCATCGCGGGTAT...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATTCGAACCAGACCTTGTaGAGCAGCCCAAAGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FYSILGSELGLLSQLHTNSNQTL*SSPKGV Trigger: CACGCCCTTTGGGCTGCTCAACAAGGTCTGGTTCGA...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAAGCCTTACAGAGGGGATaGCGCTTAGACAGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLFNFRFRAWFTVPAAHKALQRG*RLDRYL Trigger: CAAGTACCTGTCTAAGCGCAATCCCCTCTGTAAGGC...TTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATGTCCCTTCTTGCCTATGGCTTaGTTCTCGTACCATGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FNFRFRAWFTVPAAHKCPFLPMA*FSYHVT Trigger: TGTGACATGGTACGAGAACAAAGCCATAGGCAAGAA...GGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS-3UTR CAA 90 bp | TTTTATTCAATTTTAGGTTCAGAGCTTGGTTTACTGTCCCAGCTGCACACAAATCGGATACAAAGTCTTTaGGGGGAAGAAGGGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FYSILGSELGLLSQLHTNRIQSL*GEEGPQ Trigger: CTGCGGCCCTTCTTCCCCCAAAAGACTTTGTATCCG...ATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACCTAAAATTGAATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | CTGGTGTTCTCGCTCAGCCGGGCCCGCTCGGGGCGCTaGAGCACGTCGGGGTCCAGCTCCGCGCTGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVFSLSRARSGR*STSGSSSALSP Trigger: GGGGGACAGCGCGGAGCTGGACCCCGACGTGCTGCAGCGCCCCGAGCGGGCCCGGCTGAGCGAGAACACCAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | CCTCCTCCTCTTCCTCCTCCTCCTCCTCGCCCGCGCTaGAGTAATGCGGGCGGCCGTAGCGGCGGCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPLPPPPPRPR*SNAGGRSGGRG Trigger: GCCGCGGCCGCCGCTACGGCCGCCCGCATTACTGCAGCGCGGGCGAGGAGGAGGAGGAGGAAGAGGAGGAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | GGGCCCCGCGCCCTGCTCCTCGAGCTTGCGGATGACTaGGGCCAGCGTCAGGTTGGCGCTGCGCAGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRALLLELADD*GQRQVGAAQLG Trigger: CCCGAGCTGCGCAGCGCCAACCTGACGCTGGCCGCAGTCATCCGCAAGCTCGAGGAGCAGGGCGCGGGGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | CCCGGAAGATGCGCACGGCGTAGCGGGTGGCCAGCCTaGTGTTCTCGCTCAGCCGGGCCCGCTCGGGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGRCARRSGWPA*CSRSAGPARGA Trigger: AGCGCCCCGAGCGGGCCCGGCTGAGCGAGAACACCAGGCTGGCCACCCGCTACGCCGTGCGCATCTTCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 72 bp | CGCTGGAGGTGTAGAGCTTGCGCAGGTCGGCGCGCGTaGTGGCTTGCTTCTGCACCACGGGCCCCGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RWRCRACAGRRA*WLASAPRAPRP Trigger: AGGGCGCGGGGCCCGTGGTGCAGAAGCAAGCCATCACGCGCGCCGACCTGCGCAAGCTCTACACCTCCAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | AGCTTGCGCAGGTCGGCGCGCGTGATGGCTTGCTTCTaGACCACGGGCCCCGCGCCCTGCTCCTCGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRRSARVMACF*TTGPAPCSSSL Trigger: CAAGCTCGAGGAGCAGGGCGCGGGGCCCGTGGTGCAGAAGCAAGCCATCACGCGCGCCGACCTGCGCAAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | TGTTCTCGGCCGCAGCAGCGGCGCTGCCGCCCGCGCTaGTGTTACAGTCCCCGCTGCCAGGCATTCTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSRPQQRRCRPR*CYSPRCQAFSP Trigger: TGGCGAGAATGCCTGGCAGCGGGGACTGTAACACCAGCGCGGGCGGCAGCGCCGCTGCTGCGGCCGAGAACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 90 bp | ATGGCTTGCTTCTGCACCACGGGCCCCGCGCCCTGCTCCTCGAGCTaGCGGATGACTGCGGCCAGCGTCAGGTTGGCGCTGCGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: MACFCTTGPAPCSSS*RMTAASVRLALRSS Trigger: CGAGCTGCGCAGCGCCAACCTGACGCTGGCCGCAGTCATCCGCAAGCTCGAGGAGCAGGGCGCGGGGCCCGTGGTGCAGAAGCAAGCCAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | GGCGCCTCGGGCTCCAGCGCGGCGCTCTGGTCCATATaGATCATATGGACCGGCTCCGGCTCCAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GASGSSAALWSI*IIWTGSGSSSS Trigger: GGAGGAGCTGGAGCCGGAGCCGGTCCATATGATCCATATGGACCAGAGCGCCGCGCTGGAGCCCGAGGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | AGTCGTGGCGGCGCCTCGGGCTCCAGCGCGGCGCTCTaGTCCATATGGATCATATGGACCGGCTCCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGGASGSSAAL*SIWIIWTGSGS Trigger: GGAGCCGGAGCCGGTCCATATGATCCATATGGACCAGAGCGCCGCGCTGGAGCCCGAGGCGCCGCCACGACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | TCAGGTACTCCCGGAAGATGCGCACGGCGTAGCGGGTaGCCAGCCTGGTGTTCTCGCTCAGCCGGGCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGTPGRCARRSG*PAWCSRSAGPA Trigger: AGCGGGCCCGGCTGAGCGAGAACACCAGGCTGGCCACCCGCTACGCCGTGCGCATCTTCCGGGAGTACCTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | CCCCTGACCCGAACACTGACTCGTACAGCGTGCGCTTaGGCGCCGCCTCGGACTTCACGTCGGGCCCGACCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTRTLTRTACA*APPRTSRRARP Trigger: AGGTCGGGCCCGACGTGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAGTGTTCGGGTCAGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 72 bp | TCCCCTGACCCGAACACTGACTCGTACAGCGTGCGCTaGGGCGCCGCCTCGGACTTCACGTCGGGCCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: SPDPNTDSYSVR*GAASDFTSGPT Trigger: GGTCGGGCCCGACGTGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAGTGTTCGGGTCAGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 90 bp | CCGCAGATTTCCCCTGACCCGAACACTGACTCGTACAGCGTGCGCTaGGGCGCCGCCTCGGACTTCACGTCGGGCCCGACCTGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PQISPDPNTDSYSVR*GAASDFTSGPTWLS Trigger: AGACAGCCAGGTCGGGCCCGACGTGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAGTGTTCGGGTCAGGGGAAATCTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS TCA 72 bp | CGGGGCCACACGCACCACGAGGCACTCGCAGGGCCGTaGAAAGCGGCCAGTTTCCCTGTCCTGTTTCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: RGHTHHEALAGP*KAASFPVLFPS Trigger: CGATGGAAACAGGACAGGGAAACTGGCCGCTTTTCACGGCCCTGCGAGTGCCTCGTGGTGCGTGTGGCCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025992.7 ENSMUST00000168989.9 ENSMUST00000234864.2 |
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| CDS GCA 72 bp | AGATTTCCCCTGACCCGAACACTGACTCGTACAGCGTaGGCTTGGGCGCCGCCTCGGACTTCACGTCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RFPLTRTLTRTA*AWAPPRTSRRA Trigger: GGCCCGACGTGAAGTCCGAGGCGGCGCCCAAGCGCACGCTGTACGAGTCAGTGTTCGGGTCAGGGGAAATCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS CCA 72 bp | AGGAGCGCAGCACGCGGCACAGCGCCCCCTTGTCCATaGTCTCGAAGTCCGGGCTCTGAGCCTTTTCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSAARGTAPPCP*SRSPGSEPFRS Trigger: TGAGCGAAAAGGCTCAGAGCCCGGACTTCGAGACCATGGACAAGGGGGCGCTGTGCCGCGTGCTGCGCTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 72 bp | AGGATGGGTGGGAGCGTGGTGGGAGTGGTGACGAGCTaGCCCGTTCAGAGAGTCGGTATAGCAGCCCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RMGGSVVGVVTS*PVQRVGIAALR Trigger: CCGCAGGGCTGCTATACCGACTCTCTGAACGGGTCAGCTCGTCACCACTCCCACCACGCTCCCACCCATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | GGCTCTGAGCCTTTTCGCTCAGGTACTCCCGGAAGATaGGCACGGCGTAGCGGGTGGCCAGCCTGGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSEPFRSGTPGR*ARRSGWPAWCS Trigger: AGAACACCAGGCTGGCCACCCGCTACGCCGTGCGCATCTTCCGGGAGTACCTGAGCGAAAAGGCTCAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | ATGGCCAGCCCGAAGGAGTCCTCCTCCAGCTCGCGCTaGTTCTCACGGCCTCGCGTGCAGAAGTACATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MASPKESSSSSR*FSRPRVQKYMH Trigger: GTGCATGTACTTCTGCACGCGAGGCCGTGAGAACCAGCGCGAGCTGGAGGAGGACTCCTTCGGGCTGGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 72 bp | GGGGAGCCTAGCTTGGTCCCGATACCCGCGATGCTGTaGAGTGTGGCGATGGACACCGCGCCGATGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: GEPSLVPIPAML*SVAMDTAPMQW Trigger: CCATTGCATCGGCGCGGTGTCCATCGCCACACTCAACAGCATCGCGGGTATCGGGACCAAGCTAGGCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 72 bp | AGCGCCCCCTTGTCCATGGTCTCGAAGTCCGGGCTCTaGGCCTTTTCGCTCAGGTACTCCCGGAAGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPLSMVSKSGL*AFSLRYSRKMR Trigger: GCGCATCTTCCGGGAGTACCTGAGCGAAAAGGCTCAGAGCCCGGACTTCGAGACCATGGACAAGGGGGCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 72 bp | GGGAGCCTAGCTTGGTCCCGATACCCGCGATGCTGTTaGGTGTGGCGATGGACACCGCGCCGATGCAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLAWSRYPRCC*VWRWTPRRCNG Trigger: ACCATTGCATCGGCGCGGTGTCCATCGCCACACTCAACAGCATCGCGGGTATCGGGACCAAGCTAGGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | CCTCGGACTTCACGTCGGGCCCGACCTGGCTGTCTTTaGGGAGGATATAAGTGTTACCCAGCGAGGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRTSRRARPGCL*GGYKCYPARAA Trigger: AGCCGCCCTCGCTGGGTAACACTTATATCCTCCCCAAAGACAGCCAGGTCGGGCCCGACGTGAAGTCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 90 bp | CGGCCTCGCGTGCAGAAGTACATGCACGTCTCGAACCAGACCTTGTaGAGCAGCCCAAAGGGCGTGTTGGTGCTGAAGACGCTGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPRVQKYMHVSNQTL*SSPKGVLVLKTLEV Trigger: CACCTCCAGCGTCTTCAGCACCAACACGCCCTTTGGGCTGCTCAACAAGGTCTGGTTCGAGACGTGCATGTACTTCTGCACGCGAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | TGGCGTAGGGACAGAACTCAGTGCCCGTCTCGTACATaGGAGGCAAGTTCTCTTCGTCGCTGCTCTCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WRRDRTQCPSRT*EASSLRRCSPH Trigger: GTGCGGAGAGCAGCGACGAAGAGAACTTGCCTCGCATGTACGAGACGGGCACTGAGTTCTGTCCCTACGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 90 bp | TCACGGCCTCGCGTGCAGAAGTACATGCACGTCTCGAACCAGACCTaGTTGAGCAGCCCAAAGGGCGTGTTGGTGCTGAAGACGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRPRVQKYMHVSNQT*LSSPKGVLVLKTLE Trigger: CTCCAGCGTCTTCAGCACCAACACGCCCTTTGGGCTGCTCAACAAGGTCTGGTTCGAGACGTGCATGTACTTCTGCACGCGAGGCCGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 90 bp | ACCACCGCATCCACAGGTTCCGAGGAGGGACGGATACAAAGTCTTTaGGGGGAAGAAGGGCCGCAGATTTCCCCTGACCCGAACACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TTASTGSEEGRIQSL*GEEGPQISPDPNTD Trigger: GTCAGTGTTCGGGTCAGGGGAAATCTGCGGCCCTTCTTCCCCCAAAAGACTTTGTATCCGTCCCTCCTCGGAACCTGTGGATGCGGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | CCGTCTCGTACATGCGAGGCAAGTTCTCTTCGTCGCTaGTCTCCGCACGCTTCTTACTCCAGGACGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSRTCEASSLRR*SPHASYSRTRN Trigger: GTTCCTCGTCCTGGAGTAAGAAGCGTGCGGAGAGCAGCGACGAAGAGAACTTGCCTCGCATGTACGAGACGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | TGGCTTTGTTCTCGTACCATGTCACATCGCCCTCACTaGAGTGGTCCCGGGGCCGCTGGAAAAACGCCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: WLCSRTMSHRPH*SGPGAAGKTPY Trigger: GTAAGGCGTTTTTCCAGCGGCCCCGGGACCACTGCAGTGAGGGCGATGTGACATGGTACGAGAACAAAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CCA 72 bp | TTGTTCTCGTACCATGTCACATCGCCCTCACTGCAGTaGTCCCGGGGCCGCTGGAAAAACGCCTTACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LFSYHVTSPSLQ*SRGRWKNALQR Trigger: CCTCTGTAAGGCGTTTTTCCAGCGGCCCCGGGACCACTGCAGTGAGGGCGATGTGACATGGTACGAGAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 72 bp | CGCGTGCAGAAGTACATGCACGTCTCGAACCAGACCTaGTTGAGCAGCCCAAAGGGCGTGTTGGTGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVQKYMHVSNQT*LSSPKGVLVLK Trigger: CTTCAGCACCAACACGCCCTTTGGGCTGCTCAACAAGGTCTGGTTCGAGACGTGCATGTACTTCTGCACGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 90 bp | TCCTGGGCGGGGGAAACAATAGCAGGTGAAACTATGGTGGGAGAATaGGTGCTTCGGTGCCCATTGACTTCTGGAAGAAGAGGCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWAGETIAGETMVGE*VLRCPLTSGRRGRG Trigger: CCCCCTGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTCTCCCACCATAGTTTCACCTGCTATTGTTTCCCCCGCCCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | GCAGGTGAAACTATGGTGGGAGAATTGGTGCTTCGGTaGCCATTGACTTCTGGAAGAAGAGGCAGGGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGETMVGELVLR*PLTSGRRGRGS Trigger: CGACCCCCTGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTCTCCCACCATAGTTTCACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS CAA 72 bp | GTGCAGAAGTACATGCACGTCTCGAACCAGACCTTGTaGAGCAGCCCAAAGGGCGTGTTGGTGCTGAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: VQKYMHVSNQTL*SSPKGVLVLKT Trigger: CGTCTTCAGCACCAACACGCCCTTTGGGCTGCTCAACAAGGTCTGGTTCGAGACGTGCATGTACTTCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS TCA 72 bp | ACGAGGAACGCGACTTATGGTAAGGCCCAAGCGACTTaGAGTAAACGAACTTGCGACCGTCCTCGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: TRNATYGKAQAT*SKRTCDRPRPW Trigger: CCATGGACGAGGACGGTCGCAAGTTCGTTTACTTCAAGTCGCTTGGGCCTTACCATAAGTCGCGTTCCTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
||
| CDS GCA 72 bp | ACAGCTTGGCTGCCTTGGACAGCATCTGCATCCTGGTaGCCAGCAAGTTCTTGCCTATGGCTTTGTTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: TAWLPWTASASW*PASSCLWLCSR Trigger: ACGAGAACAAAGCCATAGGCAAGAACTTGCTGGGCACCAGGATGCAGATGCTGTCCAAGGCAGCCAAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS CCA 72 bp | GCATCTGCATCCTGGTGCCCAGCAAGTTCTTGCCTATaGCTTTGTTCTCGTACCATGTCACATCGCCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ASASWCPASSCL*LCSRTMSHRPH Trigger: GTGAGGGCGATGTGACATGGTACGAGAACAAAGCCATAGGCAAGAACTTGCTGGGCACCAGGATGCAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS CAA 72 bp | GAAACTATGGTGGGAGAATTGGTGCTTCGGTGCCCATaGACTTCTGGAAGAAGAGGCAGGGGGTCGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ETMVGELVLRCP*TSGRRGRGSCF Trigger: GAAACACGACCCCCTGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTCTCCCACCATAGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS CAA 90 bp | ATAGCAGGTGAAACTATGGTGGGAGAATTGGTGCTTCGGTGCCCATaGACTTCTGGAAGAAGAGGCAGGGGGTCGTGTTTCACGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: IAGETMVGELVLRCP*TSGRRGRGSCFTET Trigger: GGTTTCCGTGAAACACGACCCCCTGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTCTCCCACCATAGTTTCACCTGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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| CDS TCA 72 bp | AAACTATGGTGGGAGAATTGGTGCTTCGGTGCCCATTaGCTTCTGGAAGAAGAGGCAGGGGGTCGTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: KLWWENWCFGAH*LLEEEAGGRVS Trigger: TGAAACACGACCCCCTGCCTCTTCTTCCAGAAGTCAATGGGCACCGAAGCACCAATTCTCCCACCATAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168989.9 |
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