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Pregenerated sensors for KCNV2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047298

Ensembl transcript IDs: ENSMUST00000056708.4

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTTACTCCCTGGGGGAGGCAGTGTACAGCTGTCTGAACAGATGTaGTCAGTAAGACTGGGAGGAGGCCTCTTGCTGTTGACTAGGTCC +
Preference number: 1 (lower is better)
Translates to: FLLPGGGSVQLSEQM*SVRLGGGLLLLTRS
Trigger: GGACCTAGTCAACAGCAAGAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCCTCCCCCAGGGAGTAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CCA 90 bp GAATTAAAAGAAAGGTTTCAAGGAGAGAAATGGCCCAAGGGGCACTaGTTCCCAACCCTCAGTCTAAAGAGGTCTTCCAGGGCTTGCCAT +
Preference number: 1 (lower is better)
Translates to: ELKERFQGEKWPKGH*FPTLSLKRSSRACH
Trigger: ATGGCAAGCCCTGGAAGACCTCTTTAGACTGAGGGTTGGGAACCAGTGCCCCTTGGGCCATTTCTCTCCTTGAAACCTTTCTTTTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 90 bp ACAAGCTCCAGTTATGGGAGCAAATCTCTGAGTGCTCTGTGCAAATaGGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCC +
Preference number: 1 (lower is better)
Translates to: TSSSYGSKSLSALCK*AFNFNFNLQEPCGP
Trigger: GGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCTCATTTGCACAGAGCACTCAGAGATTTGCTCCCATAACTGGAGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 90 bp GTCAAGATAATTTCTCACAGACACAGCCATGGTCACAGGACATTCTaGTCAGAGCAATCTCTCAATGGAGGTTCCCACTTCCCAAGTGAC +
Preference number: 1 (lower is better)
Translates to: VKIISHRHSHGHRTF*SEQSLNGGSHFPSD
Trigger: GTCACTTGGGAAGTGGGAACCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTGTGAGAAATTATCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 90 bp ACCGTGGCATATAAAGAGCTGAAGTGTTCAGGGCTGATTAAGCTATaGGGCTGTTCCTTCATGAACTATGGGATCAAGGCCCTTATACGA +
Preference number: 1 (lower is better)
Translates to: TVAYKELKCSGLIKL*GCSFMNYGIKALIR
Trigger: TCGTATAAGGGCCTTGATCCCATAGTTCATGAAGGAACAGCCTCATAGCTTAATCAGCCCTGAACACTTCAGCTCTTTATATGCCACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 90 bp CTTGTTGACTGTGTTATGTGGATATGTGAGCTGACTGAGTTCACATaGTTACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTT +
Preference number: 1 (lower is better)
Translates to: LVDCVMWICELTEFT*LLLARKLVQNSSSL
Trigger: AAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTAATCATGTGAACTCAGTCAGCTCACATATCCACATAACACAGTCAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CCA 90 bp GTGCAAATGAGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTaGACCCAGAAAGGAATTAAAAGAAAGGTTTCAAGGAGAGAAATG +
Preference number: 1 (lower is better)
Translates to: VQMSLQFQLQFTGAL*TQKGIKRKVSRREM
Trigger: CATTTCTCTCCTTGAAACCTTTCTTTTAATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCTCATTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR GCA 90 bp ATCAAGCTAGATGCCATGAGAATCTATAAGAGAAATCTAAGATGTTaGTTCCTCAGAGCCATTTCCAGTACTGACATCATACATCTAGCT +
Preference number: 1 (lower is better)
Translates to: IKLDAMRIYKRNLRC*FLRAISSTDIIHLA
Trigger: AGCTAGATGTATGATGTCAGTACTGGAAATGGCTCTGAGGAAGCAACATCTTAGATTTCTCTTATAGATTCTCATGGCATCTAGCTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 90 bp AAGAATTCTATAACATCACAAGCTCCAGTTATGGGAGCAAATCTCTaGGTGCTCTGTGCAAATGAGCCTTCAATTTCAACTTCAATTTAC +
Preference number: 1 (lower is better)
Translates to: KNSITSQAPVMGANL*VLCANEPSISTSIY
Trigger: GTAAATTGAAGTTGAAATTGAAGGCTCATTTGCACAGAGCACTCAGAGATTTGCTCCCATAACTGGAGCTTGTGATGTTATAGAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGTGGCCCAAGGGGCACTaGTTCCCAACCCTCAGTCTA +
Preference number: 2 (lower is better)
Translates to: QTQPWSQDILIRAISQWRWPKGH*FPTLSL
Trigger: TAGACTGAGGGTTGGGAACCAGTGCCCCTTGGGCCA...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 90 bp GGGGCACTGGTTCCCAACCCTCAGTCTAAAGAGGTCTTCCAGGGCTaGCCATTCAGCAAGTGTTGTGAAGGAGGTTTTACTCTTCCACCT +
Preference number: 2 (lower is better)
Translates to: GALVPNPQSKEVFQG*PFSKCCEGGFTLPP
Trigger: AGGTGGAAGAGTAAAACCTCCTTCACAACACTTGCTGAATGGCAAGCCCTGGAAGACCTCTTTAGACTGAGGGTTGGGAACCAGTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 90 bp TCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCTTGCTGTaGACTAGGTCCCATCCCAGGAACCTGGAAGGTTCCAGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: SEQMWSVRLGGGLLL*TRSHPRNLEGSSFV
Trigger: AACAAAGCTGGAACCTTCCAGGTTCCTGGGATGGGACCTAGTCAACAGCAAGAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGCACATGCCCCTCTGTTaGCAGGAGGGGACCATAATT +
Preference number: 2 (lower is better)
Translates to: QTQPWSQDILIRAISQWRHMPLC*QEGTII
Trigger: AATTATGGTCCCCTCCTGGCAACAGAGGGGCATGTG...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp GGGATGGATGGAAGGGCAGCTGCCTTGTTGACTGTGTTATGTGGATATGTGAGCAGGTCTTCCAGGGCTTaGCATTCAGCAAGTGTTGTG +
Preference number: 2 (lower is better)
Translates to: GMDGRAAALLTVLCGYVSRSSRA*HSASVV
Trigger: CACAACACTTGCTGAATGGCAAGCCCTGGAAGACCT...GCTCACATATCCACATAACACAGTCAACAAGGCAGCTGCCCTTCCATCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp AGGAGAGAAATGGCCCAAGGGGCACTGGTTCCCAACCCTCAGTCTAAAGAGGTCGAGTTTGGGCTGAAATaGTCATTCCCAGAGTTAGAA +
Preference number: 2 (lower is better)
Translates to: RREMAQGALVPNPQSKEVEFGLK*SFPELE
Trigger: TTCTAACTCTGGGAATGATCATTTCAGCCCAAACTC...GACCTCTTTAGACTGAGGGTTGGGAACCAGTGCCCCTTGGGCCATTTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCGAATTTCTTCTGCCTTaGAGTTCTAAGTCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLEFLLP*SSKSAL
Trigger: GAGAGCTGACTTAGAACTGCAAGGCAGAAGAAATTC...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCTTCTGGCAAGGAAACTaGTTCAAAATTCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLFWQGN*FKIPPL
Trigger: GAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAA...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATGTGTTGGCATCACATaGCCCTCTGTTGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPICVGIT*PSVARR
Trigger: CCTCCTGGCAACAGAGGGGCATGTGATGCCAACACA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCAGAAATCTAAGATGTTaGTTCCTCAGAGCCATTTCC +
Preference number: 2 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLRNLRC*FLRAIS
Trigger: GGAAATGGCTCTGAGGAAGCAACATCTTAGATTTCT...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCTCTAAAATTCAAGTTTaGCTCTGTGCTTTTGGCTTG +
Preference number: 2 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLSKIQV*LCAFGL
Trigger: CAAGCCAAAAGCACAGAGTCAAACTTGAATTTTAGA...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATGTCACTGCCCACAGTaGGCTAGGCCCTCAAACAAT +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPICHCPQ*ARPSNN
Trigger: ATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGATCAGGGCAAGAGCATaGAGCAGAAGCCATGGAGGA +
Preference number: 2 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEIRARA*SRSHGG
Trigger: TCCTCCATGGCTTCTGCTTCATGCTCTTGCCCTGAT...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATAGGATGGAAGGGCAGCTaGCTTGTTGACTGTGTTATG +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIGWKGS*LVDCVM
Trigger: CATAACACAGTCAACAAGGCAGCTGCCCTTCCATCC...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGCCAGAGTTAGAACTTTaGACAGAATGCTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: QTQPWSQDILIRAISQWRPELEL*TECSLC
Trigger: ACACAAAGAGCATTCTGTTCAAAGTTCTAACTCTGG...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGATCTGGGATACTGGCTaGGTGGTTGATCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEIWDTG*VVDLTP
Trigger: TGGAGTCAGATCAACCACTCAGCCAGTATCCCAGAT...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 90 bp ATGTTCCTACGCCTGGGACACAGTGAAGCTCACAAAATGTTCTTTTaGTGTGTGTTAATTGTATTCTGCCTGCTGTTCTTACTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: MFLRLGHSEAHKMFF*CVLIVFCLLFLLPG
Trigger: CCCAGGGAGTAAGAACAGCAGGCAGAATACAATTAACACACACAAAAAGAACATTTTGTGAGCTTCACTGTGTCCCAGGCGTAGGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCGAAGCAATGAAGCTTTaGAATTCATGGGTTCAACCA +
Preference number: 2 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCEAMKL*NSWVQP
Trigger: TGGTTGAACCCATGAATTTCAAAGCTTCATTGCTTC...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGTCACAGACACAGCCATaGTCACAGGACATTCTGATC +
Preference number: 2 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQESQTQP*SQDILI
Trigger: GATCAGAATGTCCTGTGACCATGGCTGTGTCTGTGA...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 90 bp TTAGGATACAATCTTCTCTGTAGAATGCACCAAAAAGGCACCATCTaGACTGCAGAGAGCAGTTTGAACCTACAACACAACTGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: LGYNLLCRMHQKGTI*TAESSLNLQHNCLC
Trigger: ACACAGGCAGTTGTGTTGTAGGTTCAAACTGCTCTCTGCAGTCAAGATGGTGCCTTTTTGGTGCATTCTACAGAGAAGATTGTATCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATACTGGCTGAGTGGTTaGTCTGACTCCAAAACTTAT +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIYWLSG*SDSKTY
Trigger: ATAAGTTTTGGAGTCAGATCAACCACTCAGCCAGTA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGGGTCACAGGACATTCTaGTCAGAGCAATCTCTCAAT +
Preference number: 2 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEGHRTF*SEQSLN
Trigger: ATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACC...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATGTGGATATGTGAGCTaGCTGAGTTCACATGATTAC +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPICGYVS*LSSHDY
Trigger: GTAATCATGTGAACTCAGTCAGCTCACATATCCACA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTAAGTTACAGACTAGATaGATAGTTCCTAACATTTGC +
Preference number: 2 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTKLQTR*IVPNIC
Trigger: GCAAATGTTAGGAACTATGCATCTAGTCTGTAACTT...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTAAGGGCCCCTCCTCCTaGTTTGAACTAGGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: KGKRGHISSYISWLKFIIKGPSS*FELGGN
Trigger: GTTTCCCCCTAGTTCAAACCAGGAGGAGGGGCCCTT...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATAAATGCTAGAAGCTACTaGGGTTATCTTCAACCCCAA +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPINARSY*GYLQPQ
Trigger: TTGGGGTTGAAGATAACCCCAGTAGCTTCTAGCATT...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGAAGAGAAGACTCTCTTaGCTGAAGGGTGTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEKRRLS*LKGVLF
Trigger: AAACAGCACACCCTTCAGCCAAGAGAGTCTTCTCTT...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATAATCTTCTCTGTAGAATaGACCAAAAAGGCACCATCT +
Preference number: 2 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIIFSVE*TKKAPS
Trigger: AGATGGTGCCTTTTTGGTGCATTCTACAGAGAAGAT...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGTACTGGCTCACTCTCTaGCTTGTTCCCTGGCTCACA +
Preference number: 2 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMYWLTL*LVPWLT
Trigger: TGTGAGCCAGGGAACAAGCCAGAGAGTGAGCCAGTA...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTGCCTCAGATGAACCTTaGCTTAAAGCCCAGTCTCAC +
Preference number: 2 (lower is better)
Translates to: KGKRGHISSYISWLKFIIASDEP*LKAQSH
Trigger: GTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGC...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 90 bp GCAACAAAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTaGAAATTCATCATTAAGAGAAATCAGGGCAAGAGCATGAAGCAG +
Preference number: 2 (lower is better)
Translates to: ATKGKRGHISSYISW*KFIIKRNQGKSMKQ
Trigger: CTGCTTCATGCTCTTGCCCTGATTTCTCTTAATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTTTGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGCAGTGTACAGCTGTCTaGACAGATGTGGTCAGTAAG +
Preference number: 2 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMQCTAV*TDVVSK
Trigger: CTTACTGACCACATCTGTTCAGACAGCTGTACACTG...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGTACAGAAAAATTTCATaGACCAAGTTTGGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEYRKIS*TKFGFP
Trigger: TGGGAACCCAAACTTGGTCCATGAAATTTTTCTGTA...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCCAGAAAGGAATTCTGGGAAATAAAGAATaGAAGTCTGAGTTAAGTGAG +
Preference number: 2 (lower is better)
Translates to: SLQFQLQFTGALWTQKGILGNKE*KSELSE
Trigger: CTCACTTAACTCAGACTTCCATTCTTTATTTCCCAG...AATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTCACAAGCTCCAGTTATaGGAGCAAATCTCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: KGKRGHISSYISWLKFIIHKLQL*EQISEC
Trigger: GCACTCAGAGATTTGCTCCCATAACTGGAGCTTGTG...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGCTGTCTGAACAGATGTaGTCAGTAAGACTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMLSEQM*SVRLGG
Trigger: TCCTCCCAGTCTTACTGACCACATCTGTTCAGACAG...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGAGGAATGATGCTTACTaGCTCACTCTCTGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMRNDAY*LTLWLV
Trigger: AACAAGCCAGAGAGTGAGCCAGTAAGCATCATTCCT...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR TCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTAGTGCTCTGTGCAAATaGGCCTTCAATTTCAACTTC +
Preference number: 2 (lower is better)
Translates to: KGKRGHISSYISWLKFIISALCK*AFNFNF
Trigger: GAAGTTGAAATTGAAGGCTCATTTGCACAGAGCACT...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTCTTCCACCTCTCTTCTaGGAAATAAAGAATGGAAGT +
Preference number: 2 (lower is better)
Translates to: KGKRGHISSYISWLKFIILPPLF*EIKNGS
Trigger: ACTTCCATTCTTTATTTCCCAGAAGAGAGGTGGAAG...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGTCACATGATTACTTCTaGCAAGGAAACTGGTTCAAA +
Preference number: 2 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMSHDYF*QGNWFK
Trigger: TTTGAACCAGTTTCCTTGCCAGAAGTAATCATGTGA...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR GCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGGGGGAAACGTCTTCCTaGAATTCAAATCTAAATATA +
Preference number: 2 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMGETSS*NSNLNI
Trigger: TATATTTAGATTTGAATTGCAGGAAGACGTTTCCCC...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CCA 72 bp CCTGGGGGAGGCAGTGTACAGCTGTCTGAACAGATGTaGTCAGTAAGACTGGGAGGAGGCCTCTTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: PGGGSVQLSEQM*SVRLGGGLLLL
Trigger: CAACAGCAAGAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCCTCCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp GTTCTTACTCCCTGGGGGAGGCAGTGTACAGCTGTCTaGACAGATGTGGTCAGTAAGACTGGGAGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: VLTPWGRQCTAV*TDVVSKTGRRP
Trigger: AGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCCTCCCCCAGGGAGTAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp TCAGGGCAAGAGCATGAAGCAGAAGCCATGGAGGAATaGTGCTTACTGGCTCACTCTCTGGCTTGTTCCCTG +
Preference number: 3 (lower is better)
Translates to: SGQEHEAEAMEE*CLLAHSLACSL
Trigger: CAGGGAACAAGCCAGAGAGTGAGCCAGTAAGCATCATTCCTCCATGGCTTCTGCTTCATGCTCTTGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp GGGATGGATGGAAGGGCAGCTGCCTTGTTGACTGTGTTATGTGGATATGTGAGCTTAGAAGAGTCCACTTaGTCCACCCTTCAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: GMDGRAAALLTVLCGYVSLEEST*STLQVL
Trigger: AAGCACCTGAAGGGTGGACAAAGTGGACTCTTCTAA...GCTCACATATCCACATAACACAGTCAACAAGGCAGCTGCCCTTCCATCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp AGAGGTCTTCCAGGGCTTGCCATTCAGCAAGTGTTGTaGAGGAGGTTTTACTCTTCCACCTCTCTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: RGLPGLAIQQVL*RRFYSSTSLLG
Trigger: TCCCAGAAGAGAGGTGGAAGAGTAAAACCTCCTTCACAACACTTGCTGAATGGCAAGCCCTGGAAGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp AGGAGAGAAATGGCCCAAGGGGCACTGGTTCCCAACCCTCAGTCTAAAGAGGTCAGAAGCAATGAAGCTTaGAAATTCATGGGTTCAACC +
Preference number: 3 (lower is better)
Translates to: RREMAQGALVPNPQSKEVRSNEA*KFMGST
Trigger: GGTTGAACCCATGAATTTCAAAGCTTCATTGCTTCT...GACCTCTTTAGACTGAGGGTTGGGAACCAGTGCCCCTTGGGCCATTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp GAAGTTTCACTTCATCATCAAATCCATCCCTGGAGTTaGAGTGCTAGAGAGCTGGGGATGGATGGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: EVSLHHQIHPWS*SARELGMDGRA
Trigger: TGCCCTTCCATCCATCCCCAGCTCTCTAGCACTTCAACTCCAGGGATGGATTTGATGATGAAGTGAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR GCA 72 bp TTCCCAACCCTCAGTCTAAAGAGGTCTTCCAGGGCTTaGCATTCAGCAAGTGTTGTGAAGGAGGTTTTACTC +
Preference number: 3 (lower is better)
Translates to: FPTLSLKRSSRA*HSASVVKEVLL
Trigger: GAGTAAAACCTCCTTCACAACACTTGCTGAATGGCAAGCCCTGGAAGACCTCTTTAGACTGAGGGTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp ATTTCTCACAGACACAGCCATGGTCACAGGACATTCTaGTCAGAGCAATCTCTCAATGGAGGTTCCCACTTC +
Preference number: 3 (lower is better)
Translates to: ISHRHSHGHRTF*SEQSLNGGSHF
Trigger: GAAGTGGGAACCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTGTGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCCTAGGTTGTATCATATaGACGAGAACTAACCAGCAC +
Preference number: 3 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCLGCII*TRTNQH
Trigger: GTGCTGGTTAGTTCTCGTCAATATGATACAACCTAG...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCCTCATCCTTAAGACTTaGTACATTTCCCAATCGAAG +
Preference number: 3 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCLILKT*YISQSK
Trigger: CTTCGATTGGGAAATGTACAAAGTCTTAAGGATGAG...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCTTTCATGGACCAAGTTaGGGTTCCCATAGTAATTCT +
Preference number: 3 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCFHGPS*GSHSNS
Trigger: AGAATTACTATGGGAACCCAAACTTGGTCCATGAAA...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGCAAAAAGGCACCATCTaGACTGCAGAGAGCAGTTTG +
Preference number: 3 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEQKGTI*TAESSL
Trigger: CAAACTGCTCTCTGCAGTCAAGATGGTGCCTTTTTG...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp TATAAAGAGCTGAAGTGTTCAGGGCTGATTAAGCTATaGGGCTGTTCCTTCATGAACTATGGGATCAAGGCC +
Preference number: 3 (lower is better)
Translates to: YKELKCSGLIKL*GCSFMNYGIKA
Trigger: GGCCTTGATCCCATAGTTCATGAAGGAACAGCCTCATAGCTTAATCAGCCCTGAACACTTCAGCTCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGCAGCGTTCAGTGAGCTaGCCTTATGCTTTTAGGATA +
Preference number: 3 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEQRSVS*PYAFRI
Trigger: TATCCTAAAAGCATAAGGCAAGCTCACTGAACGCTG...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR-3UTR CAA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTGAGGTCTTCCAGGGCTaGCCATTCAGCAAGTGTTGT +
Preference number: 3 (lower is better)
Translates to: KGKRGHISSYISWLKFIIEVFQG*PFSKCC
Trigger: ACAACACTTGCTGAATGGCAAGCCCTGGAAGACCTC...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp ATAACATCACAAGCTCCAGTTATGGGAGCAAATCTCTaGGTGCTCTGTGCAAATGAGCCTTCAATTTCAACT +
Preference number: 3 (lower is better)
Translates to: ITSQAPVMGANL*VLCANEPSIST
Trigger: AGTTGAAATTGAAGGCTCATTTGCACAGAGCACTCAGAGATTTGCTCCCATAACTGGAGCTTGTGATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp TATCTAAAATTCAAGTTTGACTCTGTGCTTTTGGCTTaGGTAGGGCTCTCTGTAAGTCAGGTGTGTTGTCAC +
Preference number: 3 (lower is better)
Translates to: YLKFKFDSVLLA*VGLSVSQVCCH
Trigger: GTGACAACACACCTGACTTACAGAGAGCCCTACTCAAGCCAAAAGCACAGAGTCAAACTTGAATTTTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp AAAATCAAGAGTAAGCTCATTGTGACTAAGCCTTTGTaGGTGACCAGGGAAACCTTGATAACGCAACTGAAG +
Preference number: 3 (lower is better)
Translates to: KIKSKLIVTKPL*VTRETLITQLK
Trigger: CTTCAGTTGCGTTATCAAGGTTTCCCTGGTCACTCACAAAGGCTTAGTCACAATGAGCTTACTCTTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CCA 72 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTaGACCCAGAAAGGAATTAAAAGAAAGGTTTCAAGG +
Preference number: 3 (lower is better)
Translates to: SLQFQLQFTGAL*TQKGIKRKVSR
Trigger: CCTTGAAACCTTTCTTTTAATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp GCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTaGAATTCATCATTAAGAGAAATCAGGGCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: AREGIFHLTFLG*NSSLREIRARA
Trigger: TGCTCTTGCCCTGATTTCTCTTAATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR TCA 72 bp TATTCAATCATGTTTGATGAATGTGTCAACTTCATATaGCTCCACAATGTGGAGTACATTGCAGAATCAGCT +
Preference number: 3 (lower is better)
Translates to: YSIMFDECVNFI*LHNVEYIAESA
Trigger: AGCTGATTCTGCAATGTACTCCACATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CCA 72 bp TATTCACACATACAGAAAAATTTCATGGACCAAGTTTaGGTTCCCATAGTAATTCTAGACAGAGGTTCATCA +
Preference number: 3 (lower is better)
Translates to: YSHIQKNFMDQV*VPIVILDRGSS
Trigger: TGATGAACCTCTGTCTAGAATTACTATGGGAACCCAAACTTGGTCCATGAAATTTTTCTGTATGTGTGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp GGGATGGATGGAAGGGCAGCTGCCTTGTTGACTGTGTTATGTGGATATGTGAGCTGCGAGTGGTGGAGGTaGCCAGGCGACCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GMDGRAAALLTVLCGYVSCEWWR*PGDPGA
Trigger: CGCGCCTGGGTCGCCTGGCCACCTCCACCACTCGCA...GCTCACATATCCACATAACACAGTCAACAAGGCAGCTGCCCTTCCATCCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp GGGATGGATGGAAGGGCAGCTGCCTTGTTGACTGTGTTATGTGGATATGTGAGCTCTCCTCCACCGTGTTaGGCGCCAGGGCCACCACGG +
Preference number: 4 (lower is better)
Translates to: GMDGRAAALLTVLCGYVSSPPPC*APGPPR
Trigger: CCGTGGTGGCCCTGGCGCTCAACACGGTGGAGGAGA...GCTCACATATCCACATAACACAGTCAACAAGGCAGCTGCCCTTCCATCCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTTCCTCGGCCTGCGCCTaGGCGCGCAGCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTSSACA*ARSSLW
Trigger: CCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGA...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp GGGATGGATGGAAGGGCAGCTGCCTTGTTGACTGTGTTATGTGGATATGTGAGCGGCCTCTGCGAGTGGTaGAGGTGGCCAGGCGACCCA +
Preference number: 4 (lower is better)
Translates to: GMDGRAAALLTVLCGYVSGLCEW*RWPGDP
Trigger: TGGGTCGCCTGGCCACCTCCACCACTCGCAGAGGCC...GCTCACATATCCACATAACACAGTCAACAAGGCAGCTGCCCTTCCATCCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCCCACCCCCATGGCCTTaGCGGCCACAGAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLPPPWP*RPQRKR
Trigger: CCTTTTCCTCTGTGGCCGCCAAGGCCATGGGGGTGG...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTTGGTGGCCACCCCCATaGCCTTGGCGGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTWWPPP*PWRPQR
Trigger: CCTCTGTGGCCGCCAAGGCCATGGGGGTGGCCACCA...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp GGGATGGATGGAAGGGCAGCTGCCTTGTTGACTGTGTTATGTGGATATGTGAGCGCTCCAAGATGGGCCTaGGGTCCCCACCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: GMDGRAAALLTVLCGYVSAPRWA*GPHHLC
Trigger: GCACAGGTGGTGGGGACCCCAGGCCCATCTTGGAGC...GCTCACATATCCACATAACACAGTCAACAAGGCAGCTGCCCTTCCATCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCAGCGTGGCGTGTATTTaGGCCTCACTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLSVACI*ASLPSS
Trigger: GCTACTGGGGAGTGAGGCTCAAATACACGCCACGCT...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGGCACCTGGCCTACCTTaGCCACTCGGCCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: QTQPWSQDILIRAISQWRAPGLP*PLGPRS
Trigger: AGACCGTGGGCCGAGTGGGCAAGGTAGGCCAGGTGC...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGCTCCATAGCCCACGGTaGAGATGCTTACCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QTQPWSQDILIRAISQWRLHSPR*RCLPRP
Trigger: GGGCCGCGGTAAGCATCTCCACCGTGGGCTATGGAG...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp ATGTGGTCAGTAAGACTGGGAGGAGGCCTCTTGCTGTaGACTAGGTCCCATCCCAGGAACCTGGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: MWSVRLGGGLLL*TRSHPRNLEGS
Trigger: GGAACCTTCCAGGTTCCTGGGATGGGACCTAGTCAACAGCAAGAGGCCTCCTCCCAGTCTTACTGACCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGGGGGAGTCCTTGTTGTaGCTCTGGTCCTCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QTQPWSQDILIRAISQWRGESLL*LWSSLV
Trigger: CACGAGCGAGGACCAGAGGCACAACAAGGACTCCCC...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTGGAAGGCAAAAAGCCTaGCCAGGTGGGTCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTGRQKA*PGGSPG
Trigger: ACCCGGAGACCCACCTGGGCAGGCTTTTTGCCTTCC...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp GGCAGTGTACAGCTGTCTGAACAGATGTGGTCAGTAAGACTGGGAGGAGGCCTCGGTAGAAAGGCAGAATaGCCACCAGGTCCACTAGGT +
Preference number: 4 (lower is better)
Translates to: GSVQLSEQMWSVRLGGGLGRKAE*PPGPLG
Trigger: ACCTAGTGGACCTGGTGGCCATTCTGCCTTTCTACC...GAGGCCTCCTCCCAGTCTTACTGACCACATCTGTTCAGACAGCTGTACACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTAGGAGCAGATGCTCCTaGGGTGTTGGTTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTRSRCS*GVGCSQ
Trigger: CTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCT...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGGGTCCCCACCACCTGTaGCCTGCTCCGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEGPHHL*PAPPGA
Trigger: AGCACCAGGCGGAGCAGGGCACAGGTGGTGGGGACC...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCCACAGCATCTCCACGTaGTCCAAGATGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCHSIST*SKMGLG
Trigger: CCCCAGGCCCATCTTGGAGCACGTGGAGATGCTGTG...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCAGTGGCGAGCCAGCTTaGGGATTCGGAAGATGCGCA +
Preference number: 4 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCSGEPA*GFGRCA
Trigger: TGCGCATCTTCCGAATCCTCAAGCTGGCTCGCCACT...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATGGCCTGAGAGCCAGTaGGGGCTCCCAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIWPESQ*GLPRSR
Trigger: TCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCCAGAAAGGAATTGTGCCCTGCTCCGCCTaGTGCTGCATCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLQFQLQFTGALWTQKGIVPCSA*CCISST
Trigger: GGTGGAGGAGATGCAGCACCAGGCGGAGCAGGGCAC...AATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGCCACGTGCTCCAAGATaGGCCTGGGGTCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEPRAPR*AWGPHH
Trigger: GTGGTGGGGACCCCAGGCCCATCTTGGAGCACGTGG...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTAAAAGGGCTTCTCCATaGGGTTCCAGAGGCGTTGAC +
Preference number: 4 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTKRASP*GSRGVD
Trigger: GTCAACGCCTCTGGAACCTCATGGAGAAGCCCTTTT...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGCCAGGTCCACTAGGTTaGGGGCGCTGCGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEPGPLG*GRCVQS
Trigger: GCTTTGCACGCAGCGCCCTCAACCTAGTGGACCTGG...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATACTCCCAAGGAGCAGATaGTCCTGCGGTGTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPILPRSR*SCGVGC
Trigger: GCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAG...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATCCATTGTGGTGCGATaGTGGCCTGAGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPISIVVR*WPESQC
Trigger: GCACTGGCTCTCAGGCCAGCATCGCACCACAATGGA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATAGCTCCTCGAGAAAGCTaGGTGGACACAGCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIAPRES*VDTARL
Trigger: GAGACGAGCTGTGTCCACGCAGCTTTCTCGAGGAGC...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCCAGAAAGGAATTGCTCCTCGAAGCAGATaGGACAGCAGCGTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SLQFQLQFTGALWTQKGIAPRSR*DSSVAC
Trigger: ACACGCCACGCTGCTGTCGCATCTGCTTCGAGGAGC...AATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCCACCGAGTAGACAGCTaGAGAGAAGGAGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCHRVDS*REGEDA
Trigger: GGCATCTTCTCCTTCTCTGCAGCTGTCTACTCGGTG...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCGAGCTGGAAGACCGCTaGGTCACGGTCAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCELEDR*VTVKEV
Trigger: TACTTCTTTGACCGTGACCCAGCGGTCTTCCAGCTC...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGCGCAGCCCTGTGGAGTaGCGAGCCAGCTTGAGGATT +
Preference number: 4 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQERSPVE*RASLRI
Trigger: AATCCTCAAGCTGGCTCGCCACTCCACAGGGCTGCG...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATAGCAGGAACTCCAGAGTaGAGAAAGCCACGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIAGTPE*RKPRTA
Trigger: TGCTGTGCGTGGCTTTCTTCACTCTGGAGTTCCTGC...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp GTTCCCAACCCTCAGTCTAAAGAGGTCTTCCAGGGCTaGCCATTCAGCAAGTGTTGTGAAGGAGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: VPNPQSKEVFQG*PFSKCCEGGFT
Trigger: AGTAAAACCTCCTTCACAACACTTGCTGAATGGCAAGCCCTGGAAGACCTCTTTAGACTGAGGGTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp GTTCCCACTTCCCAAGTGACTCTAGGTTGTATCATATaGACGAGAACTAACCAGCACCAAGGCTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: VPTSQVTLGCII*TRTNQHQGCDL
Trigger: GAGGTCACAGCCTTGGTGCTGGTTAGTTCTCGTCAATATGATACAACCTAGAGTCACTTGGGAAGTGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGTCCTGCGGTGTTGGTTaGTCCCAGTGTTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQESCGVG*SQCWAH
Trigger: ATGTGCCCAACACTGGGAGCAACCAACACCGCAGGA...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGAAAAGCCTGCCCAGGTaGGTCTCCGGGTACATGTCT +
Preference number: 4 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQEKSLPR*VSGYMS
Trigger: AGACATGTACCCGGAGACCCACCTGGGCAGGCTTTT...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCTGTACTCGTAAGCTTTaGGCTTGCTGTAGTAATCGG +
Preference number: 4 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCCTRKL*ACCSNR
Trigger: CCGATTACTACAGCAAGCTCAAAGCTTACGAGTACA...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATAGTACTCGTCTGTCTGTaGCTCGTAGTCATCACACAG +
Preference number: 4 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIVLVCL*LVVITQ
Trigger: CTGTGTGATGACTACGAGGCACAGACAGACGAGTAC...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR TCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGTCTGGTCCTCGCTCGTaGAGCACTCGAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMSGPRS*STRAAA
Trigger: AGCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGA...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTCTCGGTCCATTGTGGTaGGATGCTGGCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: KGKRGHISSYISWLKFIILGPLW*DAGLRA
Trigger: GGCTCTCAGGCCAGCATCGCACCACAATGGACCGAG...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp AAGGGCAAGAGAGGGCATATTTCATCTTACATTTCTTGGTTGAAATTCATCATTATGATGCGCAGCACCTaGCCTACCTTGCCCACTCGG +
Preference number: 4 (lower is better)
Translates to: KGKRGHISSYISWLKFIIMMRST*PTLPTR
Trigger: CCGAGTGGGCAAGGTAGGCCAGGTGCTGCGCATCAT...AATGATGAATTTCAACCAAGAAATGTAAGATGAAATATGCCCTCTCTTGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp CACCAAAAAGGCACCATCTTGACTGCAGAGAGCAGTTaGAACCTACAACACAACTGCCTGTGTCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: HQKGTILTAESS*NLQHNCLCLDL
Trigger: AAGATCAAGACACAGGCAGTTGTGTTGTAGGTTCAAACTGCTCTCTGCAGTCAAGATGGTGCCTTTTTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp CATGGAGGAATGATGCTTACTGGCTCACTCTCTGGCTaGTTCCCTGGCTCACATTCATCTAACTTTCTTATA +
Preference number: 4 (lower is better)
Translates to: HGGMMLTGSLSG*FPGSHSSNFLI
Trigger: TATAAGAAAGTTAGATGAATGTGAGCCAGGGAACAAGCCAGAGAGTGAGCCAGTAAGCATCATTCCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp AATCTTCTCTGTAGAATGCACCAAAAAGGCACCATCTaGACTGCAGAGAGCAGTTTGAACCTACAACACAAC +
Preference number: 4 (lower is better)
Translates to: NLLCRMHQKGTI*TAESSLNLQHN
Trigger: GTTGTGTTGTAGGTTCAAACTGCTCTCTGCAGTCAAGATGGTGCCTTTTTGGTGCATTCTACAGAGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CCA 90 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCCAGAAAGGAATTAATTCTCTTGCCTTGTaGTGGACTGTGCATGACTTT +
Preference number: 4 (lower is better)
Translates to: SLQFQLQFTGALWTQKGINSLAL*WTVHDF
Trigger: AAAGTCATGCACAGTCCACCACAAGGCAAGAGAATT...AATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp GTTTGGGCTGAAATGATCATTCCCAGAGTTAGAACTTaGAACAGAATGCTCTTTGTGTGTGTTGGCATCACA +
Preference number: 4 (lower is better)
Translates to: VWAEMIIPRVRT*NRMLFVCVGIT
Trigger: TGTGATGCCAACACACACAAAGAGCATTCTGTTCAAAGTTCTAACTCTGGGAATGATCATTTCAGCCCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR GCA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGTTCTTTGTGGCTCTCTaGATAAAGTTGACCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMFFVAL*IKLTFP
Trigger: AGGAAAGGTCAACTTTATGCAGAGAGCCACAAAGAA...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
3UTR CAA 72 bp ATATTCACACATACAGAAAAATTTCATGGACCAAGTTaGGGTTCCCATAGTAATTCTAGACAGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: IFTHTEKFHGPS*GSHSNSRQRFI
Trigger: GATGAACCTCTGTCTAGAATTACTATGGGAACCCAAACTTGGTCCATGAAATTTTTCTGTATGTGTGAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp AGCTCCTCGGCCTCCTCGGCCTGCGCCTGCGCGCGCAGCTCCCTTTaGATCTTCAGTTGCTCGCTCAGTTCATCCCTCCGCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SSSASSACACARSSL*IFSCSLSSSLRSSK
Trigger: CTTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAGGCCGAGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp ATGGCCACCAGGTCCACTAGGTTGAGGGCGCTGCGTGCAAAGCGCTaGAGGTTAGGGGTGGAGGCGAGGCGCAGCAGGAACTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: MATRSTRLRALRAKR*RLGVEARRSRNSRV
Trigger: CACTCTGGAGTTCCTGCTGCGCCTCGCCTCCACCCCTAACCTGCAGCGCTTTGCACGCAGCGCCCTCAACCTAGTGGACCTGGTGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp GTGCGATGCTGGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGCAGATaGTCCTGCGGTGTTGGTTGCTCCCAGTGTTGGGCACATCCTCAG +
Preference number: 5 (lower is better)
Translates to: VRCWPESQCGLPRSR*SCGVGCSQCWAHPQ
Trigger: CTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp AGTTGCCCTCGGTCCATTGTGGTGCGATGCTGGCCTGAGAGCCAGTaGGGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTTGGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SCPRSIVVRCWPESQ*GLPRSRCSCGVGCS
Trigger: GGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp TCCTCGGCCTGCGCCTGCGCGCGCAGCTCCCTTTGGATCTTCAGTTaGTCGCTCAGTTCATCCCTCCGCTCCTCGAAGCAGATGCGACAG +
Preference number: 5 (lower is better)
Translates to: SSACACARSSLWIFS*SLSSSLRSSKQMRQ
Trigger: CTGTCGCATCTGCTTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp AAGCGCATGTCCCGAAAGAGCTCCTCGGCCTCCTCGGCCTGCGCCTaGGCGCGCAGCTCCCTTTGGATCTTCAGTTGCTCGCTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KRMSRKSSSASSACA*ARSSLWIFSCSLSS
Trigger: TGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAGGCCGAGGAGCTCTTTCGGGACATGCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp GAGTGGTGGAGGTGGCCAGGCGACCCAGGCGCGTTTTGGGGTAGTTaGCCAGCTCACAGCATTCCAGCAGATAGCTGTGGCCGCCTACGT +
Preference number: 5 (lower is better)
Translates to: EWWRWPGDPGAFWGS*PAHSIPADSCGRLR
Trigger: ACGTAGGCGGCCACAGCTATCTGCTGGAATGCTGTGAGCTGGCCAACTACCCCAAAACGCGCCTGGGTCGCCTGGCCACCTCCACCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 90 bp CCCTCCGCTCCTCGAAGCAGATGCGACAGCAGCGTGGCGTGTATTTaGGCCTCACTCCCCAGTAGCCCAGCTCCTCGAGAAAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PSAPRSRCDSSVACI*ASLPSSPAPRESCV
Trigger: CACGCAGCTTTCTCGAGGAGCTGGGCTACTGGGGAGTGAGGCTCAAATACACGCCACGCTGCTGTCGCATCTGCTTCGAGGAGCGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp AGCCAGTGCGGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTTGGTTaGTCCCAGTGTTGGGCACATCCTCAGTCTCTGGGGTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: SQCGLPRSRCSCGVG*SQCWAHPQSLGYSR
Trigger: CCTGGAGTACCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 90 bp TGGAGATGCTTACCGCGGCCCACCACCAGGCATGGAGGATGCTGGTaGAGTTGGTACCAGGCACGTCGTGCTCCACCGAGTAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: WRCLPRPTTRHGGCW*SWYQARRAPPSRQL
Trigger: CAGCTGTCTACTCGGTGGAGCACGACGTGCCTGGTACCAACTTCACCAGCATCCTCCATGCCTGGTGGTGGGCCGCGGTAAGCATCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp GCTCAGTTCATCCCTCCGCTCCTCGAAGCAGATGCGACAGCAGCGTaGCGTGTATTTGAGCCTCACTCCCCAGTAGCCCAGCTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: AQFIPPLLEADATAA*RVFEPHSPVAQLLE
Trigger: CTCGAGGAGCTGGGCTACTGGGGAGTGAGGCTCAAATACACGCCACGCTGCTGTCGCATCTGCTTCGAGGAGCGGAGGGATGAACTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 90 bp CGTGTTCTCGTGGGGAGTCCTTGTTGTGCCTCTGGTCCTCGCTCGTaGAGCACTCGAGCAGCAGCTGCAGGTAGAAAGGCAGAATGGCCA +
Preference number: 5 (lower is better)
Translates to: RVLVGSPCCASGPRS*STRAAAAGRKAEWP
Trigger: TGGCCATTCTGCCTTTCTACCTGCAGCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCACGAGAACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp CTCCCAAGGAGCAGATGCTCCTGCGGTGTTGGTTGCTCCCAGTGTTaGGCACATCCTCAGTCTCTGGGGTACTCCAGGGCTTGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: LPRSRCSCGVGCSQC*AHPQSLGYSRACSS
Trigger: TGAGCTACAAGCCCTGGAGTACCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp TTTGAGCCTCACTCCCCAGTAGCCCAGCTCCTCGAGAAAGCTGCGTaGACACAGCTCGTCTCGCACCAGCAACACCCCGGATGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: FEPHSPVAQLLEKAA*TQLVSHQQHPGCVE
Trigger: TTCTACACATCCGGGGTGTTGCTGGTGCGAGACGAGCTGTGTCCACGCAGCTTTCTCGAGGAGCTGGGCTACTGGGGAGTGAGGCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp CCTCAATGTAGTAATTGTAGTTGCCCTCGGTCCATTGTGGTGCGATaGTGGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGCAGATGCTCC +
Preference number: 5 (lower is better)
Translates to: PQCSNCSCPRSIVVR*WPESQCGLPRSRCS
Trigger: GGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp CAATGTAGTAATTGTAGTTGCCCTCGGTCCATTGTGGTGCGATGCTaGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGCAGATGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QCSNCSCPRSIVVRC*PESQCGLPRSRCSC
Trigger: GCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp ATAGCTGTGGCCGCCTACGTTCACTTTCAGCGTGGACATTTGGGCTaGAGTATCGTTGTGGCCATCCAGGAGGCTTGTGAGGCACTCCGC +
Preference number: 5 (lower is better)
Translates to: IAVAAYVHFQRGHLG*SIVVAIQEACEALR
Trigger: GCGGAGTGCCTCACAAGCCTCCTGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGCCACAGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp CCTCCTCCCCGCAGTCCTCATCTTCCTCAATGTAGTAATTGTAGTTaGCCTCGGTCCATTGTGGTGCGATGCTGGCCTGAGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: PPPRSPHLPQCSNCS*PRSIVVRCWPESQC
Trigger: GCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAAGATGAGGACTGCGGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp AGAGGAAAAGGGCTTCTCCATGAGGTTCCAGAGGCGTTGACGTTGTaGTCCATAGAAGCGCATGTCCCGAAAGAGCTCCTCGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGKGLLHEVPEALTL*SIEAHVPKELLGLL
Trigger: GAGGAGGCCGAGGAGCTCTTTCGGGACATGCGCTTCTATGGACCACAACGTCAACGCCTCTGGAACCTCATGGAGAAGCCCTTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp ACTCCCAACAGTCTTGTGCCTCAGATGAACCTTGGCTTAAAGCCCAGTCTCACTATCTCCTCCACCGTGTaGAGCGCCAGGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: TPNSLVPQMNLGLKPSLTISSTV*SARATT
Trigger: CGTGGTGGCCCTGGCGCTCAACACGGTGGAGGAGAT...AGTGAGACTGGGCTTTAAGCCAAGGTTCATCTGAGGCACAAGACTGTTGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp CTCATCTTCCTCAATGTAGTAATTGTAGTTGCCCTCGGTCCATTGTaGTGCGATGCTGGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LIFLNVVIVVALGPL*CDAGLRASAGSQGA
Trigger: TGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAAGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 90 bp AGCATTCCAGCAGATAGCTGTGGCCGCCTACGTTCACTTTCAGCGTaGACATTTGGGCTGGAGTATCGTTGTGGCCATCCAGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: SIPADSCGRLRSLSA*TFGLEYRCGHPGGL
Trigger: CAAGCCTCCTGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGCCACAGCTATCTGCTGGAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp ATCTTCCTCAATGTAGTAATTGTAGTTGCCCTCGGTCCATTGTGGTaGGATGCTGGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: IFLNVVIVVALGPLW*DAGLRASAGSQGAD
Trigger: ATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 90 bp GGTGAAGTTGGTACCAGGCACGTCGTGCTCCACCGAGTAGACAGCTaGAGAGAAGGAGAAGATGCCCATAGTGATGAAGAGCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: GEVGTRHVVLHRVDS*REGEDAHSDEEHQA
Trigger: TGCCTGATGCTCTTCATCACTATGGGCATCTTCTCCTTCTCTGCAGCTGTCTACTCGGTGGAGCACGACGTGCCTGGTACCAACTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp CAGACACAGCCATGGTCACAGGACATTCTGATCAGAGCAATCTCTCAATGGAGGGAGTGGCGAGCCAGCTaGAGGATTCGGAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: QTQPWSQDILIRAISQWREWRAS*RIRKMR
Trigger: GCGCATCTTCCGAATCCTCAAGCTGGCTCGCCACTC...CCTCCATTGAGAGATTGCTCTGATCAGAATGTCCTGTGACCATGGCTGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp GATGTCACTGCCCACAGTGGGCTAGGCCCTCAAACAATAATCATCTATAAGTGCACCAGGTCCACTAGGTaGAGGGCGCTGCGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: DVTAHSGLGPQTIIIYKCTRSTR*RALRAK
Trigger: CTTTGCACGCAGCGCCCTCAACCTAGTGGACCTGGT...GCACTTATAGATGATTATTGTTTGAGGGCCTAGCCCACTGTGGGCAGTGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCCAGAAAGGAATTGCCACCCCCATGGCCTaGGCGGCCACAGAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: SLQFQLQFTGALWTQKGIATPMA*AATEEK
Trigger: CTTTTCCTCTGTGGCCGCCAAGGCCATGGGGGTGGC...AATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp TACTTCTGGCAAGGAAACTGGTTCAAAATTCCTCCTCTCTTTACTTGGCAAGAGCGTGGGGAGTCCTTGTaGTGCCTCTGGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: YFWQGNWFKIPPLFTWQERGESL*CLWSSL
Trigger: GAGCGAGGACCAGAGGCACAACAAGGACTCCCCACG...CTCTTGCCAAGTAAAGAGAGGAGGAATTTTGAACCAGTTTCCTTGCCAGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp AGCCTTCAATTTCAACTTCAATTTACAGGAGCCCTGTGGACCCAGAAAGGAATTCGCGCGCAGCTCCCTTaGGATCTTCAGTTGCTCGCT +
Preference number: 5 (lower is better)
Translates to: SLQFQLQFTGALWTQKGIRAQLP*DLQLLA
Trigger: AGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCG...AATTCCTTTCTGGGTCCACAGGGCTCCTGTAAATTGAAGTTGAAATTGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp CTTGTCCAGATCAGAGTGAGTGTTATGATCATTAGGTCTTCCCTGGTCCCTATATGGTTGCTCCCAGTGTaGGGCACATCCTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LVQIRVSVMIIRSSLVPIWLLPV*GTSSVS
Trigger: AGAGACTGAGGATGTGCCCAACACTGGGAGCAACCA...TATAGGGACCAGGGAAGACCTAATGATCATAACACTCACTCTGATCTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS-3UTR CAA 90 bp GCCAATATTCAATCATGTTTGATGAATGTGTCAACTTCATATGACTCCACAATGCTCCTGCGGTGTTGGTaGCTCCCAGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: ANIQSCLMNVSTSYDSTMLLRCW*LPVLGT
Trigger: TGTGCCCAACACTGGGAGCAACCAACACCGCAGGAG...CATTGTGGAGTCATATGAAGTTGACACATTCATCAAACATGATTGAATATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp GTGCCTCGTAGTCATCACACAGGCCCAGCTGGCCTCTaGGAGTGGTGGAGGTGGCCAGGCGACCCAGGCGCG +
Preference number: 6 (lower is better)
Translates to: VPRSHHTGPAGL*EWWRWPGDPGA
Trigger: CGCGCCTGGGTCGCCTGGCCACCTCCACCACTCGCAGAGGCCAGCTGGGCCTGTGTGATGACTACGAGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp TCCCGAAAGAGCTCCTCGGCCTCCTCGGCCTGCGCCTaGGCGCGCAGCTCCCTTTGGATCTTCAGTTGCTCG +
Preference number: 6 (lower is better)
Translates to: SRKSSSASSACA*ARSSLWIFSCS
Trigger: CGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAGGCCGAGGAGCTCTTTCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp CGCATGTCCCGAAAGAGCTCCTCGGCCTCCTCGGCCTaGGCCTGCGCGCGCAGCTCCCTTTGGATCTTCAGT +
Preference number: 6 (lower is better)
Translates to: RMSRKSSSASSA*ACARSSLWIFS
Trigger: ACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAGGCCGAGGAGCTCTTTCGGGACATGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp GCCTCCTCGGCCTGCGCCTGCGCGCGCAGCTCCCTTTaGATCTTCAGTTGCTCGCTCAGTTCATCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: ASSACACARSSL*IFSCSLSSSLR
Trigger: GCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp GAGCTCCTCGGCCTCCTCGGCCTGCGCCTGCGCGCGCAGCTCCCTTaGGATCTTCAGTTGCTCGCTCAGTTCATCCCTCCGCTCCTCGAA +
Preference number: 6 (lower is better)
Translates to: ELLGLLGLRLRAQLP*DLQLLAQFIPPLLE
Trigger: TTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAGGCCGAGGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp ACCGTGTTGAGCGCCAGGGCCACCACGGAGATGAGCACGAAGAGGTaGGTGGCCACCCCCATGGCCTTGGCGGCCACAGAGGAAAAGGGC +
Preference number: 6 (lower is better)
Translates to: TVLSARATTEMSTKR*VATPMALAATEEKG
Trigger: GCCCTTTTCCTCTGTGGCCGCCAAGGCCATGGGGGTGGCCACCAACCTCTTCGTGCTCATCTCCGTGGTGGCCCTGGCGCTCAACACGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp CCACCTGTGCCCTGCTCCGCCTGGTGCTGCATCTCCTCCACCGTGTaGAGCGCCAGGGCCACCACGGAGATGAGCACGAAGAGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PPVPCSAWCCISSTV*SARATTEMSTKRLV
Trigger: CACCAACCTCTTCGTGCTCATCTCCGTGGTGGCCCTGGCGCTCAACACGGTGGAGGAGATGCAGCACCAGGCGGAGCAGGGCACAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp AGGTCCACTAGGTTGAGGGCGCTGCGTGCAAAGCGCTaGAGGTTAGGGGTGGAGGCGAGGCGCAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RSTRLRALRAKR*RLGVEARRSRN
Trigger: GTTCCTGCTGCGCCTCGCCTCCACCCCTAACCTGCAGCGCTTTGCACGCAGCGCCCTCAACCTAGTGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp CGCATGAGGCGCATGATGCGCAGCACCTGGCCTACCTaGCCCACTCGGCCCACGGTCTCCAGGTCGTGTTCT +
Preference number: 6 (lower is better)
Translates to: RMRRMMRSTWPT*PTRPTVSRSCS
Trigger: AGAACACGACCTGGAGACCGTGGGCCGAGTGGGCAAGGTAGGCCAGGTGCTGCGCATCATGCGCCTCATGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp CCCACTCGGCCCACGGTCTCCAGGTCGTGTTCTCGTGGGGAGTCCTaGTTGTGCCTCTGGTCCTCGCTCGTGAAGCACTCGAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PTRPTVSRSCSRGES*LCLWSSLVKHSSSS
Trigger: GCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCACGAGAACACGACCTGGAGACCGTGGGCCGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp TGGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGCAGATaGTCCTGCGGTGTTGGTTGCTCCCAGTGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: WPESQCGLPRSR*SCGVGCSQCWA
Trigger: TGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp GCCTCACTCCCCAGTAGCCCAGCTCCTCGAGAAAGCTaGGTGGACACAGCTCGTCTCGCACCAGCAACACCC +
Preference number: 6 (lower is better)
Translates to: ASLPSSPAPRES*VDTARLAPATP
Trigger: GGGTGTTGCTGGTGCGAGACGAGCTGTGTCCACGCAGCTTTCTCGAGGAGCTGGGCTACTGGGGAGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp CACTCCCCAGTAGCCCAGCTCCTCGAGAAAGCTGCGTaGACACAGCTCGTCTCGCACCAGCAACACCCCGGA +
Preference number: 6 (lower is better)
Translates to: HSPVAQLLEKAA*TQLVSHQQHPG
Trigger: TCCGGGGTGTTGCTGGTGCGAGACGAGCTGTGTCCACGCAGCTTTCTCGAGGAGCTGGGCTACTGGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp CTCCTCGGCCTGCGCCTGCGCGCGCAGCTCCCTTTGGATCTTCAGTaGCTCGCTCAGTTCATCCCTCCGCTCCTCGAAGCAGATGCGACA +
Preference number: 6 (lower is better)
Translates to: LLGLRLRAQLPLDLQ*LAQFIPPLLEADAT
Trigger: TGTCGCATCTGCTTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGGCCGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp ACTCGGCCCACGGTCTCCAGGTCGTGTTCTCGTGGGGAGTCCTTGTaGTGCCTCTGGTCCTCGCTCGTGAAGCACTCGAGCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: TRPTVSRSCSRGESL*CLWSSLVKHSSSSC
Trigger: GCAGCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCACGAGAACACGACCTGGAGACCGTGGGCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp GAGCCAGTGCGGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTTGGTaGCTCCCAGTGTTGGGCACATCCTCAGTCTCTGGGGTACTCCAG +
Preference number: 6 (lower is better)
Translates to: EPVRAPKEQMLLRCW*LPVLGTSSVSGVLQ
Trigger: CTGGAGTACCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp GGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTTGGTTaGTCCCAGTGTTGGGCACATCCTCAGTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: GLPRSRCSCGVG*SQCWAHPQSLG
Trigger: CCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp TGCGCCTGCGCGCGCAGCTCCCTTTGGATCTTCAGTTaGTCGCTCAGTTCATCCCTCCGCTCCTCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: CACARSSLWIFS*SLSSSLRSSKQ
Trigger: CTGCTTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp AGGTGGCCAGGCGACCCAGGCGCGTTTTGGGGTAGTTaGCCAGCTCACAGCATTCCAGCAGATAGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: RWPGDPGAFWGS*PAHSIPADSCG
Trigger: GCCACAGCTATCTGCTGGAATGCTGTGAGCTGGCCAACTACCCCAAAACGCGCCTGGGTCGCCTGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp CTGCGCCTGCGCGCGCAGCTCCCTTTGGATCTTCAGTaGCTCGCTCAGTTCATCCCTCCGCTCCTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: LRLRAQLPLDLQ*LAQFIPPLLEA
Trigger: TGCTTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp CCCACGGTCTCCAGGTCGTGTTCTCGTGGGGAGTCCTaGTTGTGCCTCTGGTCCTCGCTCGTGAAGCACTCG +
Preference number: 6 (lower is better)
Translates to: PTVSRSCSRGES*LCLWSSLVKHS
Trigger: CGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCACGAGAACACGACCTGGAGACCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp CTGAGAGCCAGTGCGGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTaGGTTGCTCCCAGTGTTGGGCACATCCTCAGTCTCTGGGGTACT +
Preference number: 6 (lower is better)
Translates to: LRASAGSQGADAPAV*VAPSVGHILSLWGT
Trigger: AGTACCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp GTGCGGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTTaGTTGCTCCCAGTGTTGGGCACATCCTCAGTCTCT +
Preference number: 6 (lower is better)
Translates to: VRAPKEQMLLRC*LLPVLGTSSVS
Trigger: AGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp ATCCCTCCGCTCCTCGAAGCAGATGCGACAGCAGCGTaGCGTGTATTTGAGCCTCACTCCCCAGTAGCCCAG +
Preference number: 6 (lower is better)
Translates to: IPPLLEADATAA*RVFEPHSPVAQ
Trigger: CTGGGCTACTGGGGAGTGAGGCTCAAATACACGCCACGCTGCTGTCGCATCTGCTTCGAGGAGCGGAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp AGGTCGTGTTCTCGTGGGGAGTCCTTGTTGTGCCTCTaGTCCTCGCTCGTGAAGCACTCGAGCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RSCSRGESLLCL*SSLVKHSSSSC
Trigger: GCAGCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCACGAGAACACGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp GAGCAGATGCTCCTGCGGTGTTGGTTGCTCCCAGTGTaGGGCACATCCTCAGTCTCTGGGGTACTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: EQMLLRCWLLPV*GTSSVSGVLQG
Trigger: GCCCTGGAGTACCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp AGTGCGGGCTCCCAAGGAGCAGATGCTCCTGCGGTGTaGGTTGCTCCCAGTGTTGGGCACATCCTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: SAGSQGADAPAV*VAPSVGHILSL
Trigger: GAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp ACGGTCTCCAGGTCGTGTTCTCGTGGGGAGTCCTTGTaGTGCCTCTGGTCCTCGCTCGTGAAGCACTCGAGC +
Preference number: 6 (lower is better)
Translates to: TVSRSCSRGESL*CLWSSLVKHSS
Trigger: GCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCACGAGAACACGACCTGGAGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 72 bp CCTCGAAGCAGATGCGACAGCAGCGTGGCGTGTATTTaGGCCTCACTCCCCAGTAGCCCAGCTCCTCGAGAA +
Preference number: 6 (lower is better)
Translates to: PRSRCDSSVACI*ASLPSSPAPRE
Trigger: TTCTCGAGGAGCTGGGCTACTGGGGAGTGAGGCTCAAATACACGCCACGCTGCTGTCGCATCTGCTTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 72 bp GTGGGGAGTCCTTGTTGTGCCTCTGGTCCTCGCTCGTaGAGCACTCGAGCAGCAGCTGCAGGTAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: VGSPCCASGPRS*STRAAAAGRKA
Trigger: TGCCTTTCTACCTGCAGCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp AGTAATTGTAGTTGCCCTCGGTCCATTGTGGTGCGATaGTGGCCTGAGAGCCAGTGCGGGCTCCCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: SNCSCPRSIVVR*WPESQCGLPRS
Trigger: GCTCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp AGCAGATGCTCCTGCGGTGTTGGTTGCTCCCAGTGTTaGGCACATCCTCAGTCTCTGGGGTACTCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SRCSCGVGCSQC*AHPQSLGYSRA
Trigger: AGCCCTGGAGTACCCCAGAGACTGAGGATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp GCTGTGGCCGCCTACGTTCACTTTCAGCGTGGACATTaGGGCTGGAGTATCGTTGTGGCCATCCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: AVAAYVHFQRGH*GWSIVVAIQEA
Trigger: AGCCTCCTGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp CAGCAGATAGCTGTGGCCGCCTACGTTCACTTTCAGCGTGGACATTaGGGCTGGAGTATCGTTGTGGCCATCCAGGAGGCTTGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: QQIAVAAYVHFQRGH*GWSIVVAIQEACEA
Trigger: TGCCTCACAAGCCTCCTGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGCCACAGCTATCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 72 bp GGGCTGGAGTATCGTTGTGGCCATCCAGGAGGCTTGTaGGGCACTCCGCCTTCTGATTCTCTTCGGCAAGAT +
Preference number: 6 (lower is better)
Translates to: GLEYRCGHPGGL*GTPPSDSLRQD
Trigger: ATCTTGCCGAAGAGAATCAGAAGGCGGAGTGCCTCACAAGCCTCCTGGATGGCCACAACGATACTCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp ACTTTCAGCGTGGACATTTGGGCTGGAGTATCGTTGTaGCCATCCAGGAGGCTTGTGAGGCACTCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: TFSVDIWAGVSL*PSRRLVRHSAF
Trigger: GAAGGCGGAGTGCCTCACAAGCCTCCTGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp GCCGCCTACGTTCACTTTCAGCGTGGACATTTGGGCTaGAGTATCGTTGTGGCCATCCAGGAGGCTTGTGAG +
Preference number: 6 (lower is better)
Translates to: AAYVHFQRGHLG*SIVVAIQEACE
Trigger: CTCACAAGCCTCCTGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp GGGCTTCTCCATGAGGTTCCAGAGGCGTTGACGTTGTaGTCCATAGAAGCGCATGTCCCGAAAGAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GLLHEVPEALTL*SIEAHVPKELL
Trigger: GAGGAGCTCTTTCGGGACATGCGCTTCTATGGACCACAACGTCAACGCCTCTGGAACCTCATGGAGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 90 bp GTCCTCATCTTCCTCAATGTAGTAATTGTAGTTGCCCTCGGTCCATaGTGGTGCGATGCTGGCCTGAGAGCCAGTGCGGGCTCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: VLIFLNVVIVVALGP*WCDAGLRASAGSQG
Trigger: TCCTTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAAGATGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp AATGTAGTAATTGTAGTTGCCCTCGGTCCATTGTGGTaGGATGCTGGCCTGAGAGCCAGTGCGGGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: NVVIVVALGPLW*DAGLRASAGSQ
Trigger: TTGGGAGCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp GGTACCAGGCACGTCGTGCTCCACCGAGTAGACAGCTaGAGAGAAGGAGAAGATGCCCATAGTGATGAAGAG +
Preference number: 6 (lower is better)
Translates to: GTRHVVLHRVDS*REGEDAHSDEE
Trigger: CTCTTCATCACTATGGGCATCTTCTCCTTCTCTGCAGCTGTCTACTCGGTGGAGCACGACGTGCCTGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CCA 72 bp GCAGATAGCTGTGGCCGCCTACGTTCACTTTCAGCGTaGACATTTGGGCTGGAGTATCGTTGTGGCCATCCA +
Preference number: 6 (lower is better)
Translates to: ADSCGRLRSLSA*TFGLEYRCGHP
Trigger: TGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGCCACAGCTATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp TTCCTCAATGTAGTAATTGTAGTTGCCCTCGGTCCATaGTGGTGCGATGCTGGCCTGAGAGCCAGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: FLNVVIVVALGP*WCDAGLRASAG
Trigger: GCCCGCACTGGCTCTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 72 bp GCACCAGCAACACCCCGGATGTGTAGAAGTTGTAGATaGGCTGGAAGACCGCTGGGTCACGGTCAAAGAAGT +
Preference number: 6 (lower is better)
Translates to: APATPRMCRSCR*AGRPLGHGQRS
Trigger: ACTTCTTTGACCGTGACCCAGCGGTCTTCCAGCTCATCTACAACTTCTACACATCCGGGGTGTTGCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp AAAGGGCTTCTCCATGAGGTTCCAGAGGCGTTGACGTaGTGGTCCATAGAAGCGCATGTCCCGAAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: KGLLHEVPEALT*WSIEAHVPKEL
Trigger: GAGCTCTTTCGGGACATGCGCTTCTATGGACCACAACGTCAACGCCTCTGGAACCTCATGGAGAAGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp CGCAGTCCTCATCTTCCTCAATGTAGTAATTGTAGTTaGCCTCGGTCCATTGTGGTGCGATGCTGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: RSPHLPQCSNCS*PRSIVVRCWPE
Trigger: CTCAGGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAAGATGAGGACTGCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS TCA 72 bp CTCGTTCCCTCCGGATGGCGGTGTACTCGTAAGCTTTaGGCTTGCTGTAGTAATCGGAGAACTTGTTGTAGA +
Preference number: 6 (lower is better)
Translates to: LVPSGWRCTRKL*ACCSNRRTCCR
Trigger: TCTACAACAAGTTCTCCGATTACTACAGCAAGCTCAAAGCTTACGAGTACACCGCCATCCGGAGGGAACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS CAA 72 bp CATTCAGCCATTTTCTTTGTGGCTCTCTGCATAAAGTaGACCTTTCCTCGTTCCCTCCGGATGGCGGTGTAC +
Preference number: 6 (lower is better)
Translates to: HSAIFFVALCIK*TFPRSLRMAVY
Trigger: GTACACCGCCATCCGGAGGGAACGAGGAAAGGTCAACTTTATGCAGAGAGCCACAAAGAAAATGGCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4
CDS GCA 72 bp TCAGATAAACATTCAGCCATTTTCTTTGTGGCTCTCTaGATAAAGTTGACCTTTCCTCGTTCCCTCCGGATG +
Preference number: 6 (lower is better)
Translates to: SDKHSAIFFVAL*IKLTFPRSLRM
Trigger: CATCCGGAGGGAACGAGGAAAGGTCAACTTTATGCAGAGAGCCACAAAGAAAATGGCTGAATGTTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056708.4