Pregenerated sensors for KCNU1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031576Ensembl transcript IDs: ENSMUST00000098858.11, ENSMUST00000120653.8, ENSMUST00000126226.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTaGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTGCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: STIYHGHLYSLHQIH*DKMVPSTAPWACQL Trigger: GAGTTGGCAAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| 3UTR TCA 72 bp | GGTCCCTTCCACAGCACCGTGGGCTTGCCAACTCGCTaGCCACTAAGCAACTGGCACAAAAATAGCATGTTT | + |
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Preference number: 3 (lower is better) Translates to: GPFHSTVGLPTR*PLSNWHKNSMF Trigger: AAACATGCTATTTTTGTGCCAGTTGCTTAGTGGTCAGCGAGTTGGCAAGCCCACGGTGCTGTGGAAGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| 3UTR CCA 72 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATaGTCCCTTCCACAGCACCGTGGGCTTGCCAACTCG | + |
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Preference number: 3 (lower is better) Translates to: IFIHYTRFTGIR*SLPQHRGLANS Trigger: CGAGTTGGCAAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| 3UTR CCA 72 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTaGGATAAGATGGTCCCTTCCACAGCACCGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: YHGHLYSLHQIH*DKMVPSTAPWA Trigger: AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR CCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTGCCGGGTGTAGTTGCTaGCTCTCAGGGGCATCACGA | + |
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Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWAAGCSC*LSGASR Trigger: TCGTGATGCCCCTGAGAGCCAGCAACTACACCCGGC...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTGGCACCAAGCAGCCTTaGGCGATAAATCCGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWAGTKQP*AINPSF Trigger: AAAGCTCGGATTTATCGCCCAAGGCTGCTTGGTGCC...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR TCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTCTCCAACCAGAACTTaGTCTTGTCTTCAGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWASPTRT*SCLQLP Trigger: GGGCAGCTGAAGACAAGATCAAGTTCTGGTTGGAGA...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR TCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTCCCAAAGCCAACAGTTaGCATTGTTGCTGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWAPKANS*HCCCHQ Trigger: CTGGTGACAGCAACAATGTCAACTGTTGGCTTTGGG...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR GCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTGCACCAGTGAAACATaGCACTGCTGTCCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWACTSET*HCCPAC Trigger: ACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCA...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTTGCCGCATACGAAGTTaGTACAGGATGTGTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLCRIRS*YRMCGT Trigger: AGTGCCACACATCCTGTACCAACTTCGTATGCGGCA...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTCTGAGGGCAGCAGGTaGCACTCATTGGATGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPSEGSR*HSLDGL Trigger: CAGGCCATCCAATGAGTGCCACCTGCTGCCCTCAGA...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTTCCAGTCCGCCCATCTaGTCAATAAAGTGGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLSSPPI*SIKWML Trigger: CAACATCCACTTTATTGAGCAGATGGGCGGACTGGA...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR CCA 90 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACAAAGGTGCACAGCCCTaGCACCAAGCAGCCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IFIHYTRFTGIRWSLPQHKGAQP*HQAALG Trigger: GCCCAAGGCTGCTTGGTGCCAGGGCTGTGCACCTTT...GTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR GCA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGCCCCACGACGGTCTGTaGAGAAAGCAGCATTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPPHDGL*RKQHFD Trigger: ATCGAAATGCTGCTTTCTGCACAGACCGTCGTGGGG...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR GCA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTACGCACATAGAGCACTaGTCTACATTGACTGCAATC | + |
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Preference number: 4 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLTHIEH*STLTAI Trigger: GATTGCAGTCAATGTAGAGCAGTGCTCTATGTGCGT...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR CCA 90 bp | CATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCATCTGAGGGCAGCAGGTaGCACTCATTGGATGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HLYSLHQIHWDKMVPSTASEGSR*HSLDGL Trigger: CAGGCCATCCAATGAGTGCCACCTGCTGCCCTCAGA...TGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR TCA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTTTTGGAAAGCTTCACTaGATTGCTGGTCTTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLFGKLH*IAGLDD Trigger: GTCATCAAGACCAGCAATTCAGTGAAGCTTTCCAAA...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR TCA 90 bp | TTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGTGAGTTTCTTCCGTTaGGCCAGGGGTCACCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FIHYTRFTGIRWSLPQHRVSFFR*ARGHQN Trigger: ATTCTGGTGACCCCTGGCTCAACGGAAGAAACTCAC...ACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR TCA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTGATTCTTCAGTTCAGTaGGAATGGGGATCTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLDSSVQ*EWGSVC Trigger: ACAAACAGATCCCCATTCTCACTGAACTGAAGAATC...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTCACAAGAGACCCGATaGTTAGTACAAAGACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWASQETR*LVQRQG Trigger: TCCTTGTCTTTGTACTAAGCATCGGGTCTCTTGTGA...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTTGGTACAGGATGTGTaGCACTTCAGTAAGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPLVQDV*HFSKVS Trigger: GGAGACCTTACTGAAGTGCCACACATCCTGTACCAA...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGCACTACAGAAATGGTTaGCTAGAATCAGGCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPHYRNG*LESGTP Trigger: AGGCGTGCCTGATTCTAGCCAACCATTTCTGTAGTG...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | AGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGCAGAGCCGGGAGACCTaGGGAAATGTCATCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: STIYHGHLYSLHQIHWDKQSRET*GNVIPT Trigger: CGTGGGGATGACATTTCCCCAGGTCTCCCGGCTCTG...CTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | TCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTTATTCAGCCTCACTTaGGATGATGGGTTTAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SLHQIHWDKMVPSTAPWALFSLT*DDGFSI Trigger: GATACTAAACCCATCATCCCAAGTGAGGCTGAATAA...AGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCCACCAGGGTACATTaGGCATCTCCAAACACGCAT | + |
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Preference number: 4 (lower is better) Translates to: HLYSLHQIHWDKMVPSTAPTRVH*ASPNTH Trigger: ATGCGTGTTTGGAGATGCCCAATGTACCCTGGTGGG...TGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | TTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGTGGCACTCATTGGATaGCCTGGTGATCACAAACCT | + |
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Preference number: 4 (lower is better) Translates to: FIHYTRFTGIRWSLPQHRVALIG*PGDHKP Trigger: AGGTTTGTGATCACCAGGCCATCCAATGAGTGCCAC...ACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR TCA 90 bp | CATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCCGAAATTATCCAATaGGCCACAGAACAGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HLYSLHQIHWDKMVPSTAPEIIQ*ATEQLS Trigger: GGACAGCTGTTCTGTGGCTCATTGGATAATTTCGGG...TGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR CCA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTCTATTGACAACAGTTTaGAAAGCTTCACTGAATTGC | + |
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Preference number: 4 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLLLTTV*KASLNC Trigger: GCAATTCAGTGAAGCTTTCCAAACTGTTGTCAATAG...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGCACTCCAGTCCCAGTTaGGGATTTTTGACAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPHSSPS*GFLTGK Trigger: TTTTCCTGTCAAAAATCCCCAACTGGGACTGGAGTG...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | CATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCAGTGGCACTCATTGGATaGCCTGGTGATCACAAACCT | + |
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Preference number: 4 (lower is better) Translates to: HLYSLHQIHWDKMVPSTAVALIG*PGDHKP Trigger: AGGTTTGTGATCACCAGGCCATCCAATGAGTGCCAC...TGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR TCA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTGTCCTCTTGGCCCCTTaGCGTATTTCCAACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLVLLAP*RISNFL Trigger: CAAGAAGTTGGAAATACGTCAAGGGGCCAAGAGGAC...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR TCA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTCCCGAAATTATCCAATaGGCCACAGAACAGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPPEIIQ*ATEQLS Trigger: GGACAGCTGTTCTGTGGCTCATTGGATAATTTCGGG...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTGTGAAGGAATCCTGCTaGCGTGAACCAGGTACTGAT | + |
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Preference number: 4 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPVKESC*REPGTD Trigger: ATCAGTACCTGGTTCACGGCAGCAGGATTCCTTCAC...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | TTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTCATCGCTGTGACAGTTaGAACAGTAAAAGAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FIHYTRFTGIRWSLPQHRHRCDS*NSKRKP Trigger: GGGCTTTCTTTTACTGTTCCAACTGTCACAGCGATG...ACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR CCA 90 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACAATCGCCATTCTCTCTaGAAGTACTCCAGAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: IFIHYTRFTGIRWSLPQHNRHSL*KYSRDP Trigger: TGGGTCTCTGGAGTACTTCCAGAGAGAATGGCGATT...GTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACGATCTTGTCTTCAGCTaGCCAAAACCTCAACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IFIHYTRFTGIRWSLPQHDLVFS*PKPQPK Trigger: TTTGGGTTGAGGTTTTGGGCAGCTGAAGACAAGATC...GTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR GCA 90 bp | GGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCTGCTCTACATTGACTaGAATCAGATCTCCCATGTA | + |
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Preference number: 4 (lower is better) Translates to: GIFIHYTRFTGIRWSLPQLLYID*NQISHV Trigger: TACATGGGAGATCTGATTGCAGTCAATGTAGAGCAG...CTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTTCCAGTCCGCCCATCTaGTCAATAAAGTGGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLSSPPI*SIKWML Trigger: CAACATCCACTTTATTGAGCAGATGGGCGGACTGGA...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTCCATCTCAGAGCTTATaGCTCCAGTCACTAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPPSQSL*LQSLAS Trigger: AGATGCTAGTGACTGGAGGCATAAGCTCTGAGATGG...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR CCA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTAATCGCCATTCTCTCTaGAAGTACTCCAGAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPNRHSL*KYSRDP Trigger: TGGGTCTCTGGAGTACTTCCAGAGAGAATGGCGATT...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR CCA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGATCTGCTCAATAAAGTaGATGTTGGAGGGATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPICSIK*MLEGFF Trigger: GAAGAATCCCTCCAACATCCACTTTATTGAGCAGAT...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR TCA 90 bp | TTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTTCCGTCAACTCCTTCTaGTTTAAACTGTCTAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: FIHYTRFTGIRWSLPQHRSVNSF*FKLSSN Trigger: ATTGCTAGACAGTTTAAATCAGAAGGAGTTGACGGA...ACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR TCA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCATTGGATGGCCTGGTaGTCACAAACCTTTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLHWMAW*SQTFCV Trigger: AACACAAAAGGTTTGTGATCACCAGGCCATCCAATG...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
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| CDS-3UTR GCA 90 bp | TTTAGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATCAGGTGAAGGAATCCTaGTGCCGTGAACCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: FSTIYHGHLYSLHQIHWDQVKES*CREPGT Trigger: AGTACCTGGTTCACGGCAGCAGGATTCCTTCACCTG...ATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS-3UTR GCA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTACGCACATAGAGCACTaGTCTACATTGACTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLTHIEH*STLTAI Trigger: GATTGCAGTCAATGTAGAGCAGTGCTCTATGTGCGT...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR TCA 90 bp | GGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGTCGAACAGGATCCATTaGATTGATGAAATAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIFIHYTRFTGIRWSLPQSNRIH*IDEIDH Trigger: GTGATCTATTTCATCAATTCAATGGATCCTGTTCGA...CTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | GGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGGGTACTGATAACTATTaGCAACAGTTTGGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIFIHYTRFTGIRWSLPQGTDNY*QQFGKL Trigger: AAGCTTTCCAAACTGTTGTCAATAGTTATCAGTACC...CTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCGGATGGCGATCAGCATaGGATTTAGCTTCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVGWRSA*DLASQS Trigger: GCTTTGTGAAGCTAAATCTCATGCTGATCGCCATCC...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | AGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGAGAGTGCAACAACTGTaGAAGAAGGGCTTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STIYHGHLYSLHQIHWDKRVQQL*KKGLCW Trigger: CCAACACAAGCCCTTCTTTCACAGTTGTTGCACTCT...CTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACGTTGTTGTCGGCTCTTaGTTTTACAGTTACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFIHYTRFTGIRWSLPQHVVVGS*FYSYTF Trigger: GAAAGTGTAACTGTAAAATCAAGAGCCGACAACAAC...GTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTAGTGTGAATTTCTGTTaGCATAGAAGCGTGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPSVNFC*HRSVDV Trigger: CACATCCACGCTTCTATGTCAACAGAAATTCACACT...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR GCA 90 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACGGTTTAGTATCAGAGTaGAACAACTGTGAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFIHYTRFTGIRWSLPQHGLVSE*NNCERR Trigger: CCTTCTTTCACAGTTGTTGCACTCTGATACTAAACC...GTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR GCA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCTTGTCCAAGGGCATTaGTCTGCACCAGTGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVLVQGH*SAPVKH Trigger: ATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAG...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR GCA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTCTGCTCTACATTGACTaGAATCAGATCTCCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPLLYID*NQISHV Trigger: TACATGGGAGATCTGATTGCAGTCAATGTAGAGCAG...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCTTCCAAGAGTCCTCTTaGCCCCTTGACGTATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVFQESS*PLDVFP Trigger: TGGAAATACGTCAAGGGGCCAAGAGGACTCTTGGAA...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | ATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACACTAGGCTGTTCTCTTaGAAAACAAGTGTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFIHYTRFTGIRWSLPQHTRLFS*KTSVNF Trigger: GAAATTCACACTTGTTTTTCAAGAGAACAGCCTAGT...GTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | AGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGCATTGGATGGCCTGGTaGTCACAAACCTTTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STIYHGHLYSLHQIHWDKHWMAW*SQTFCV Trigger: AACACAAAAGGTTTGTGATCACCAGGCCATCCAATG...CTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | AGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATACGATCTCAATATTaGTTTCCCCGGACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: STIYHGHLYSLHQIHWDKIRSQY*FPRTSS Trigger: ACTGGAAGTCCGGGGAAATCAATATTGAGATCGTAT...CTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | TTTAGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATGATTCTTCAGTTCAGTaGGAATGGGGATCTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTIYHGHLYSLHQIHWDDSSVQ*EWGSVC Trigger: ACAAACAGATCCCCATTCTCACTGAACTGAAGAATC...ATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CCA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCATCTGCTCAATAAAGTaGATGTTGGAGGGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVICSIK*MLEGFF Trigger: GAAGAATCCCTCCAACATCCACTTTATTGAGCAGAT...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCGTATTTCCAACTTCTTaGGCTTTTCAAGGCTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVVFPTS*AFQGYS Trigger: AGAATAGCCTTGAAAAGCTCAAGAAGTTGGAAATAC...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR TCA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCAATTTTGTCTTCATATaGAGAACACCTTCGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVNFVFI*RTPSNR Trigger: CCTGTTCGAAGGTGTTCTTCATATGAAGACAAAATT...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CCA 90 bp | AGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATAAGAAATAAAGGTTaGCGGGATGGTAAAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: STIYHGHLYSLHQIHWDKIRNKG*RDGKNV Trigger: GACATTTTTACCATCCCGCCAACCTTTATTTCTTAT...CTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 90 bp | TCTGACTTTGAAGACCCTGGAGTAGGACTGGTGATCCGCAGGGACTaGATGTTGAGGGTGGCCATGATGGCCTCTGTGTCCACCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: SDFEDPGVGLVIRRD*MLRVAMMASVSTRI Trigger: GATTCTGGTGGACACAGAGGCCATCATGGCCACCCTCAACATCCAGTCCCTGCGGATCACCAGTCCTACTCCAGGGTCTTCAAAGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS TCA 90 bp | GAGCCTGAATTGAAGGACTGCTGTCTGATTTGCCACAGGTGGTGTTaGAAGGGATGGCACAAAACACGAGATCTGAGGGCAGCAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPELKDCCLICHRWC*KGWHKTRDLRAAGG Trigger: GCCACCTGCTGCCCTCAGATCTCGTGTTTTGTGCCATCCCTTTCAACACCACCTGTGGCAAATCAGACAGCAGTCCTTCAATTCAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS GCA 90 bp | CCACCTTGTCCAAGGGCATTGCTCTGCACCAGTGAAACATGCCACTaGTGTCCAGCATGTCGGTATCATCCACTGTGTCGTTTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPCPRALLCTSETCH*CPACRYHPLCRLSL Trigger: CAACGACAAACGACACAGTGGATGATACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS TCA 90 bp | CTTCGTTTCAGAACCACCTTGTCCAAGGGCATTGCTCTGCACCAGTaGAACATGCCACTGCTGTCCAGCATGTCGGTATCATCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRFRTTLSKGIALHQ*NMPLLSSMSVSSTV Trigger: CACAGTGGATGATACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 90 bp | TCAGAACCACCTTGTCCAAGGGCATTGCTCTGCACCAGTGAAACATaGCACTGCTGTCCAGCATGTCGGTATCATCCACTGTGTCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEPPCPRALLCTSET*HCCPACRYHPLCRL Trigger: CAAACGACACAGTGGATGATACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 90 bp | AAGGTGTCTGAAAAGACAGCACCGGTGGAGAAAGAAGTGCTGAGATaGAAGCTAGTCCCTTTGAGCATTCCATCCAGTCCGCCCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVSEKTAPVEKEVLR*KLVPLSIPSSPPIC Trigger: GCAGATGGGCGGACTGGATGGAATGCTCAAAGGGACTAGCTTGCATCTCAGCACTTCTTTCTCCACCGGTGCTGTCTTTTCAGACACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CCA 90 bp | AACAGAGTCGTGAGAAAGGTGCACAGCCCTGGCACCAAGCAGCCTTaGGCGATAAATCCGAGCTTTAGCTCTGCAAAGCAGAGGATATTG | + |
|
Preference number: 5 (lower is better) Translates to: NRVVRKVHSPGTKQP*AINPSFSSAKQRIL Trigger: CAATATCCTCTGCTTTGCAGAGCTAAAGCTCGGATTTATCGCCCAAGGCTGCTTGGTGCCAGGGCTGTGCACCTTTCTCACGACTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTTGCAAGCTAGTCCCTTaGAGCATTCCATCCAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLCKLVP*SIPSSP Trigger: CGGACTGGATGGAATGCTCAAAGGGACTAGCTTGCA...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS TCA 90 bp | ACACGAGATCTGAGGGCAGCAGGTGGCACTCATTGGATGGCCTGGTaGTCACAAACCTTTTGTGTTCTTGGCTGGGTTCCTCTTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRDLRAAGGTHWMAW*SQTFCVLGWVPLHQ Trigger: TTGATGAAGAGGAACCCAGCCAAGAACACAAAAGGTTTGTGATCACCAGGCCATCCAATGAGTGCCACCTGCTGCCCTCAGATCTCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS GCA 90 bp | CCTTCTCACTTCGTTTCAGAACCACCTTGTCCAAGGGCATTGCTCTaGACCAGTGAAACATGCCACTGCTGTCCAGCATGTCGGTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSHFVSEPPCPRALL*TSETCHCCPACRYH Trigger: ATGATACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAAGTGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 90 bp | TTTTGCCTTCTCACTTCGTTTCAGAACCACCTTGTCCAAGGGCATTaGTCTGCACCAGTGAAACATGCCACTGCTGTCCAGCATGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLLTSFQNHLVQGH*SAPVKHATAVQHVG Trigger: ACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAAGTGAGAAGGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 90 bp | GTGTTGAAAGGGATGGCACAAAACACGAGATCTGAGGGCAGCAGGTaGCACTCATTGGATGGCCTGGTGATCACAAACCTTTTGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLKGMAQNTRSEGSR*HSLDGLVITNLLCS Trigger: AGAACACAAAAGGTTTGTGATCACCAGGCCATCCAATGAGTGCCACCTGCTGCCCTCAGATCTCGTGTTTTGTGCCATCCCTTTCAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTATCTCCAACCAGAACTaGATCTTGTCTTCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLISNQN*ILSSAA Trigger: GGCAGCTGAAGACAAGATCAAGTTCTGGTTGGAGAT...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGCACCAAGCAGCCTaGGGCGATAAATCCGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPWHQAA*GDKSEL Trigger: AAGCTCGGATTTATCGCCCAAGGCTGCTTGGTGCCA...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 90 bp | AGCTGTCCAAAGGTTTTTCTTGGATTAATGCCTGATAGAACGGTTTaGTCTAAAGAGAGGAGTCCCAGCTTACACCGCGTCCTCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCPKVFLGLMPDRTV*SKERSPSLHRVLPD Trigger: GTCTGGGAGGACGCGGTGTAAGCTGGGACTCCTCTCTTTAGACCAAACCGTTCTATCAGGCATTAATCCAAGAAAAACCTTTGGACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGTGAGTTTCTTCCGTaGAGCCAGGGGTCACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPCEFLP*SQGSPE Trigger: TTCTGGTGACCCCTGGCTCAACGGAAGAAACTCACA...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 90 bp | CCAACACTTGCCCCACGACGGTCTGTGCAGAAAGCAGCATTTCGATaGGCTGACGAAATACTCCATGAAAGTAAAGTTTCCTCAAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTLAPRRSVQKAAFR*ADEILHESKVSSKD Trigger: ATCCTTTGAGGAAACTTTACTTTCATGGAGTATTTCGTCAGCGCATCGAAATGCTGCTTTCTGCACAGACCGTCGTGGGGCAAGTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 90 bp | AGATGCAAGCTAGTCCCTTTGAGCATTCCATCCAGTCCGCCCATCTaGTCAATAAAGTGGATGTTGGAGGGATTCTTCAGTTCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCKLVPLSIPSSPPI*SIKWMLEGFFSSVR Trigger: TCTCACTGAACTGAAGAATCCCTCCAACATCCACTTTATTGAGCAGATGGGCGGACTGGATGGAATGCTCAAAGGGACTAGCTTGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTTGCAAGCTAGTCCCTTaGAGCATTCCATCCAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FIHYTRFTGIRWSLPQHRCKLVP*SIPSSP Trigger: CGGACTGGATGGAATGCTCAAAGGGACTAGCTTGCA...ACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | CATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTGGGCTTTGTTTTGAGCCTGAATaGAAGGACTGCTGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: HYTRFTGIRWSLPQHRGLCFEPE*KDCCLI Trigger: AATCAGACAGCAGTCCTTCAATTCAGGCTCAAAACA...AAGCCCACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS TCA 90 bp | GTTCCAAGCAAGGGAGAGTCTCTCCAAGGAATACGATCTCAATATTaGTTTCCCCGGACTTCCAGTGGAGAAAATTCCTCAGGAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPSKGESLQGIRSQY*FPRTSSGENSSGKQ Trigger: CTGCTTTCCTGAGGAATTTTCTCCACTGGAAGTCCGGGGAAATCAATATTGAGATCGTATTCCTTGGAGAGACTCTCCCTTGCTTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCCCCAAAGCCAACAGTaGACATTGTTGCTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GIFIHYTRFTGIRWSLPQPQSQQ*TLLLSP Trigger: TGGTGACAGCAACAATGTCAACTGTTGGCTTTGGGG...CTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS TCA 90 bp | AGGGTACATTGGGCATCTCCAAACACGCATACTACAATGTGGTTCTaGAACTCGTGTTTTGCCTTCTCACTTCGTTTCAGAACCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVHWASPNTHTTMWF*NSCFAFSLRFRTTL Trigger: CAAGGTGGTTCTGAAACGAAGTGAGAAGGCAAAACACGAGTTTCAGAACCACATTGTAGTATGCGTGTTTGGAGATGCCCAATGTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 90 bp | CTCATAATGTTTGAGTTGTCTTCGTCATGTAAGTCACTACAGAAATaGTTGGCTAGAATCAGGCACGCCTCCGAGTTCTCCACTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LIMFELSSSCKSLQK*LARIRHASEFSTAT Trigger: AGTTGCAGTGGAGAACTCGGAGGCGTGCCTGATTCTAGCCAACCATTTCTGTAGTGACTTACATGACGAAGACAACTCAAACATTATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGGTGATCACAAACCTTTaGTGTTCTTGGCTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIFIHYTRFTGIRWSLPQVITNL*CSWLGS Trigger: GGAACCCAGCCAAGAACACAAAAGGTTTGTGATCAC...CTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS GCA 90 bp | AGAGCACTGCTCTACATTGACTGCAATCAGATCTCCCATGTAGAGTaGAGATCCAGGCATAATGTGTATCTTGGGAAAGTTTCGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RALLYIDCNQISHVE*RSRHNVYLGKVSEK Trigger: TTTCTCCGAAACTTTCCCAAGATACACATTATGCCTGGATCTGCACTCTACATGGGAGATCTGATTGCAGTCAATGTAGAGCAGTGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS-3UTR CAA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTGCACTCCAGTCCCAGTaGGGGATTTTTGACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLALQSQ*GIFDRK Trigger: TTTCCTGTCAAAAATCCCCAACTGGGACTGGAGTGC...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 90 bp | TCTCCAAGGAATACGATCTCAATATTGATTTCCCCGGACTTCCAGTaGAGAAAATTCCTCAGGAAAGCAGTAACACTGTCAACTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPRNTISILISPDFQ*RKFLRKAVTLSTVM Trigger: CATCACAGTTGACAGTGTTACTGCTTTCCTGAGGAATTTTCTCCACTGGAAGTCCGGGGAAATCAATATTGAGATCGTATTCCTTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGAAGCTAAAGAAAGCGTaGAAACTCAAATCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPKLKKA*KLKSTW Trigger: CCATGTGGATTTGAGTTTCAACGCTTTCTTTAGCTT...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | CATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCAAAACCTTTTGTGTTCTaGGCTGGGTTCCTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HLYSLHQIHWDKMVPSTAKPFVF*AGFLFI Trigger: GATGAAGAGGAACCCAGCCAAGAACACAAAAGGTTT...TGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTGTGATCACAAACCTTTaGTGTTCTTGGCTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLVITNL*CSWLGS Trigger: GGAACCCAGCCAAGAACACAAAAGGTTTGTGATCAC...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CCA 90 bp | ATAATGTGTATCTTGGGAAAGTTTCGGAGAAATCGCCATTCTCTCTaGAAGTACTCCAGAGACCCAATAAAAACAATGTCCTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IMCILGKFRRNRHSL*KYSRDPIKTMSFSS Trigger: GGAGCTGAAGGACATTGTTTTTATTGGGTCTCTGGAGTACTTCCAGAGAGAATGGCGATTTCTCCGAAACTTTCCCAAGATACACATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGACTATTGACAACAGTTaGGAAAGCTTCACTGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LYSLHQIHWDKMVPSTAPTIDNS*ESFTEL Trigger: CAATTCAGTGAAGCTTTCCAAACTGTTGTCAATAGT...CGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | TATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTAAACCTTTTGTGTTCTaGGCTGGGTTCCTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: YHGHLYSLHQIHWDKMVPKPFVF*AGFLFI Trigger: GATGAAGAGGAACCCAGCCAAGAACACAAAAGGTTT...AGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTCCACAGCACCGTCAGGAAAACCTTGTTTaGAGACTGAAGTATCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FIHYTRFTGIRWSLPQHRQENLV*RLKYLN Trigger: ATTCAGATACTTCAGTCTCAAAACAAGGTTTTCCTG...ACGGTGCTGTGGAAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTGGCATAATGTGTATCTaGGGAAAGTTTCGGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLGIMCI*GKFRRN Trigger: ATTTCTCCGAAACTTTCCCAAGATACACATTATGCC...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | ATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCCCTTAGAATGGGGATCTGTTaGTATCTTTGCTTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IMGIFIHYTRFTGIRWSLRMGIC*YLCFLS Trigger: AGAAAGGAAGCAAAGATACAAACAGATCCCCATTCT...AAGGGACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCTGTTTTGAGCCTGAATaGAAGGACTGCTGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVCFEPE*KDCCLI Trigger: AATCAGACAGCAGTCCTTCAATTCAGGCTCAAAACA...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS TCA 90 bp | ATAATAAGAAATAAAGGTTGGCGGGATGGTAAAAATGTCTACAATTaGATTCATCTCCAACCAGAACTTGATCTTGTCTTCAGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IIRNKGWRDGKNVYN*IHLQPELDLVFSCP Trigger: TGGGCAGCTGAAGACAAGATCAAGTTCTGGTTGGAGATGAATTCAATTGTAGACATTTTTACCATCCCGCCAACCTTTATTTCTTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS-3UTR CAA 90 bp | ATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAAGATGGTCGGCATAATGTGTATCTaGGGAAAGTTTCGGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IYHGHLYSLHQIHWDKMVGIMCI*GKFRRN Trigger: ATTTCTCCGAAACTTTCCCAAGATACACATTATGCC...GACCATCTTATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGTACCATTTATCATGGGCATCTTTATTCATTACACCAGATTCACTGGGATAGAATGGGGATCTGTTaGTATCTTTGCTTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTIYHGHLYSLHQIHWDRMGIC*YLCFLS Trigger: AGAAAGGAAGCAAAGATACAAACAGATCCCCATTCT...ATCCCAGTGAATCTGGTGTAATGAATAAAGATGCCCATGATAAATGGTACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | GAAGACCCTGGAGTAGGACTGGTGATCCGCAGGGACTaGATGTTGAGGGTGGCCATGATGGCCTCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EDPGVGLVIRRD*MLRVAMMASVS Trigger: GGACACAGAGGCCATCATGGCCACCCTCAACATCCAGTCCCTGCGGATCACCAGTCCTACTCCAGGGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS CAA 90 bp | TTTGAAGACCCTGGAGTAGGACTGGTGATCCGCAGGGACTGGATGTaGAGGGTGGCCATGATGGCCTCTGTGTCCACCAGAATCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FEDPGVGLVIRRDWM*RVAMMASVSTRIWL Trigger: CAGCCAGATTCTGGTGGACACAGAGGCCATCATGGCCACCCTCAACATCCAGTCCCTGCGGATCACCAGTCCTACTCCAGGGTCTTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS GCA 72 bp | CCAAGGGCATTGCTCTGCACCAGTGAAACATGCCACTaGTGTCCAGCATGTCGGTATCATCCACTGTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PRALLCTSETCH*CPACRYHPLCR Trigger: ACGACACAGTGGATGATACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 72 bp | CCTTGTCCAAGGGCATTGCTCTGCACCAGTGAAACATaGCACTGCTGTCCAGCATGTCGGTATCATCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PCPRALLCTSET*HCCPACRYHPL Trigger: CAGTGGATGATACCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | GGGATGGCACAAAACACGAGATCTGAGGGCAGCAGGTaGCACTCATTGGATGGCCTGGTGATCACAAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: GMAQNTRSEGSR*HSLDGLVITNL Trigger: AAGGTTTGTGATCACCAGGCCATCCAATGAGTGCCACCTGCTGCCCTCAGATCTCGTGTTTTGTGCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CAA 90 bp | GGGATGGCACAAAACACGAGATCTGAGGGCAGCAGGTGGCACTCATaGGATGGCCTGGTGATCACAAACCTTTTGTGTTCTTGGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GMAQNTRSEGSRWHS*DGLVITNLLCSWLG Trigger: ACCCAGCCAAGAACACAAAAGGTTTGTGATCACCAGGCCATCCAATGAGTGCCACCTGCTGCCCTCAGATCTCGTGTTTTGTGCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS GCA 72 bp | GACAAGGATCACCAACACTTGCCCCACGACGGTCTGTaGAGAAAGCAGCATTTCGATGCGCTGACGAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: DKDHQHLPHDGL*RKQHFDALTKY Trigger: GTATTTCGTCAGCGCATCGAAATGCTGCTTTCTGCACAGACCGTCGTGGGGCAAGTGTTGGTGATCCTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 72 bp | CTCACTTCGTTTCAGAACCACCTTGTCCAAGGGCATTaGTCTGCACCAGTGAAACATGCCACTGCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTSFQNHLVQGH*SAPVKHATAVQ Trigger: CTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | TTCAATGAACAGAGTCGTGAGAAAGGTGCACAGCCCTaGCACCAAGCAGCCTTGGGCGATAAATCCGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FNEQSREKGAQP*HQAALGDKSEL Trigger: AAGCTCGGATTTATCGCCCAAGGCTGCTTGGTGCCAGGGCTGTGCACCTTTCTCACGACTCTGTTCATTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 90 bp | GTTTTGCCTTCTCACTTCGTTTCAGAACCACCTTGTCCAAGGGCATaGCTCTGCACCAGTGAAACATGCCACTGCTGTCCAGCATGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VLPSHFVSEPPCPRA*LCTSETCHCCPACR Trigger: CCGACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAAGTGAGAAGGCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 90 bp | GGCTCTCAGGGGCATCACGAAATTCCGAAGCCCCACCAGGGTACATaGGGCATCTCCAAACACGCATACTACAATGTGGTTCTGAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GSQGHHEIPKPHQGT*GISKHAYYNVVLKL Trigger: GAGTTTCAGAACCACATTGTAGTATGCGTGTTTGGAGATGCCCAATGTACCCTGGTGGGGCTTCGGAATTTCGTGATGCCCCTGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 90 bp | ACAGCACCGGTGGAGAAAGAAGTGCTGAGATGCAAGCTAGTCCCTTaGAGCATTCCATCCAGTCCGCCCATCTGCTCAATAAAGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TAPVEKEVLRCKLVP*SIPSSPPICSIKWM Trigger: CATCCACTTTATTGAGCAGATGGGCGGACTGGATGGAATGCTCAAAGGGACTAGCTTGCATCTCAGCACTTCTTTCTCCACCGGTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS GCA 72 bp | CCGATGCTTAGTACAAAGACAAGGATCACCAACACTTaGCCCACGACGGTCTGTGCAGAAAGCAGCATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PMLSTKTRITNT*PTTVCAESSIS Trigger: CGAAATGCTGCTTTCTGCACAGACCGTCGTGGGGCAAGTGTTGGTGATCCTTGTCTTTGTACTAAGCATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 72 bp | TTCGTTTCAGAACCACCTTGTCCAAGGGCATTGCTCTaGACCAGTGAAACATGCCACTGCTGTCCAGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: FVSEPPCPRALL*TSETCHCCPAC Trigger: ACATGCTGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS GCA 72 bp | GAAAAGACAGCACCGGTGGAGAAAGAAGTGCTGAGATaGAAGCTAGTCCCTTTGAGCATTCCATCCAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: EKTAPVEKEVLR*KLVPLSIPSSP Trigger: CGGACTGGATGGAATGCTCAAAGGGACTAGCTTGCATCTCAGCACTTCTTTCTCCACCGGTGCTGTCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CCA 72 bp | ATGAGATTTAGCTTCACAAAGCAGAGCCGGGAGACCTaGGGAAATGTCATCCCCACGAAGTCGTTAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: MRFSFTKQSRET*GNVIPTKSLER Trigger: CCTCTCTAACGACTTCGTGGGGATGACATTTCCCCAGGTCTCCCGGCTCTGCTTTGTGAAGCTAAATCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 72 bp | TCTCACTTCGTTTCAGAACCACCTTGTCCAAGGGCATaGCTCTGCACCAGTGAAACATGCCACTGCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHFVSEPPCPRA*LCTSETCHCCP Trigger: TGGACAGCAGTGGCATGTTTCACTGGTGCAGAGCAATGCCCTTGGACAAGGTGGTTCTGAAACGAAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 72 bp | GGGCATCACGAAATTCCGAAGCCCCACCAGGGTACATaGGGCATCTCCAAACACGCATACTACAATGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GHHEIPKPHQGT*GISKHAYYNVV Trigger: AACCACATTGTAGTATGCGTGTTTGGAGATGCCCAATGTACCCTGGTGGGGCTTCGGAATTTCGTGATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 72 bp | CCATCCAGTCCGCCCATCTGCTCAATAAAGTGGATGTaGGAGGGATTCTTCAGTTCAGTGAGAATGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSSPPICSIKWM*EGFFSSVRMGI Trigger: GATCCCCATTCTCACTGAACTGAAGAATCCCTCCAACATCCACTTTATTGAGCAGATGGGCGGACTGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS CAA 72 bp | ATTGAAGGACTGCTGTCTGATTTGCCACAGGTGGTGTaGAAAGGGATGGCACAAAACACGAGATCTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IEGLLSDLPQVV*KGMAQNTRSEG Trigger: GCCCTCAGATCTCGTGTTTTGTGCCATCCCTTTCAACACCACCTGTGGCAAATCAGACAGCAGTCCTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CAA 90 bp | CCTTGGGCGATAAATCCGAGCTTTAGCTCTGCAAAGCAGAGGATATaGTCTCCAGCACTCCAGTCCCAGTTGGGGATTTTTGACAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PWAINPSFSSAKQRI*SPALQSQLGIFDRK Trigger: TTTCCTGTCAAAAATCCCCAACTGGGACTGGAGTGCTGGAGACAATATCCTCTGCTTTGCAGAGCTAAAGCTCGGATTTATCGCCCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS TCA 72 bp | TGGGATGATGGGTTTAGTATCAGAGTGCAACAACTGTaGAAGAAGGGCTTGTGTTGGATGGCGATCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: WDDGFSIRVQQL*KKGLCWMAISM Trigger: CATGCTGATCGCCATCCAACACAAGCCCTTCTTTCACAGTTGTTGCACTCTGATACTAAACCCATCATCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | AAGAAAGTCGCCAAGGAGGAAAGAATGAACGCTGCCTaGATTTCGATTGTACATGACGTTTCCGTCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: KKVAKEERMNAA*ISIVHDVSVNS Trigger: GGAGTTGACGGAAACGTCATGTACAATCGAAATCCAGGCAGCGTTCATTCTTTCCTCCTTGGCGACTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | AGCATTCCATCCAGTCCGCCCATCTGCTCAATAAAGTaGATGTTGGAGGGATTCTTCAGTTCAGTGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: SIPSSPPICSIK*MLEGFFSSVRM Trigger: CATTCTCACTGAACTGAAGAATCCCTCCAACATCCACTTTATTGAGCAGATGGGCGGACTGGATGGAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS CAA 90 bp | AGTTCCAAGCAAGGGAGAGTCTCTCCAAGGAATACGATCTCAATATaGATTTCCCCGGACTTCCAGTGGAGAAAATTCCTCAGGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSKQGRVSPRNTISI*ISPDFQWRKFLRKA Trigger: TGCTTTCCTGAGGAATTTTCTCCACTGGAAGTCCGGGGAAATCAATATTGAGATCGTATTCCTTGGAGAGACTCTCCCTTGCTTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 90 bp | TTGAGCATTCCATCCAGTCCGCCCATCTGCTCAATAAAGTGGATGTaGGAGGGATTCTTCAGTTCAGTGAGAATGGGGATCTGTTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LSIPSSPPICSIKWM*EGFFSSVRMGICLY Trigger: ATACAAACAGATCCCCATTCTCACTGAACTGAAGAATCCCTCCAACATCCACTTTATTGAGCAGATGGGCGGACTGGATGGAATGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
||
| CDS CCA 72 bp | AAGGTTTTTCTTGGATTAATGCCTGATAGAACGGTTTaGTCTAAAGAGAGGAGTCCCAGCTTACACCGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: KVFLGLMPDRTV*SKERSPSLHRV Trigger: GACGCGGTGTAAGCTGGGACTCCTCTCTTTAGACCAAACCGTTCTATCAGGCATTAATCCAAGAAAAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CAA 72 bp | CGTGATGAGAATAGTTCCAAGAGTCCTCTTGGCCCCTaGACGTATTTCCAACTTCTTGAGCTTTTCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RDENSSKSPLGP*TYFQLLELFKA Trigger: AGCCTTGAAAAGCTCAAGAAGTTGGAAATACGTCAAGGGGCCAAGAGGACTCTTGGAACTATTCTCATCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CAA 72 bp | CCCACGAAGTCGTTAGAGAGGCGCTGTGTCAGAATCTaGTTCTTCAAGCCATTCAAGAAATGTTTTTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTKSLERRCVRI*FFKPFKKCFCQ Trigger: CTGGCAAAAACATTTCTTGAATGGCTTGAAGAACAAGATTCTGACACAGCGCCTCTCTAACGACTTCGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS TCA 72 bp | GTGATGAGAATAGTTCCAAGAGTCCTCTTGGCCCCTTaGCGTATTTCCAACTTCTTGAGCTTTTCAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: VMRIVPRVLLAP*RISNFLSFSRL Trigger: TAGCCTTGAAAAGCTCAAGAAGTTGGAAATACGTCAAGGGGCCAAGAGGACTCTTGGAACTATTCTCATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS TCA 72 bp | TGGGCATCTCCAAACACGCATACTACAATGTGGTTCTaGAACTCGTGTTTTGCCTTCTCACTTCGTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WASPNTHTTMWF*NSCFAFSLRFR Trigger: TCTGAAACGAAGTGAGAAGGCAAAACACGAGTTTCAGAACCACATTGTAGTATGCGTGTTTGGAGATGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | ATGAAGAACCCTAAGGTGTCCTTATTCAGCCTCACTTaGGATGATGGGTTTAGTATCAGAGTGCAACAACTG | + |
|
Preference number: 6 (lower is better) Translates to: MKNPKVSLFSLT*DDGFSIRVQQL Trigger: CAGTTGTTGCACTCTGATACTAAACCCATCATCCCAAGTGAGGCTGAATAAGGACACCTTAGGGTTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
||
| CDS CCA 72 bp | TTGGATGGCCTGGTGATCACAAACCTTTTGTGTTCTTaGCTGGGTTCCTCTTCATCAATCATACGGTATAAG | + |
|
Preference number: 6 (lower is better) Translates to: LDGLVITNLLCS*LGSSSSIIRYK Trigger: CTTATACCGTATGATTGATGAAGAGGAACCCAGCCAAGAACACAAAAGGTTTGTGATCACCAGGCCATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 |
||
| CDS CAA 72 bp | GCTGCTTTTCATCACCATGATGGTCGGTGCTATGAGTaGTTGTCGGCTCTTGATTTTACAGTTACACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: AAFHHHDGRCYE*LSALDFTVTLS Trigger: GGAAAGTGTAACTGTAAAATCAAGAGCCGACAACAACTCATAGCACCGACCATCATGGTGATGAAAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CAA 90 bp | AATCCTGCTGCCGTGAACCAGGTACTGATAACTATTGACAACAGTTaGGAAAGCTTCACTGAATTGCTGGTCTTGATGACTTGTAGGATC | + |
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Preference number: 6 (lower is better) Translates to: NPAAVNQVLITIDNS*ESFTELLVLMTCRI Trigger: GATCCTACAAGTCATCAAGACCAGCAATTCAGTGAAGCTTTCCAAACTGTTGTCAATAGTTATCAGTACCTGGTTCACGGCAGCAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS GCA 72 bp | CTCTACATTGACTGCAATCAGATCTCCCATGTAGAGTaGAGATCCAGGCATAATGTGTATCTTGGGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LYIDCNQISHVE*RSRHNVYLGKV Trigger: AACTTTCCCAAGATACACATTATGCCTGGATCTGCACTCTACATGGGAGATCTGATTGCAGTCAATGTAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
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| CDS CCA 72 bp | ATCTTGGGAAAGTTTCGGAGAAATCGCCATTCTCTCTaGAAGTACTCCAGAGACCCAATAAAAACAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: ILGKFRRNRHSL*KYSRDPIKTMS Trigger: GGACATTGTTTTTATTGGGTCTCTGGAGTACTTCCAGAGAGAATGGCGATTTCTCCGAAACTTTCCCAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098858.11 ENSMUST00000120653.8 ENSMUST00000126226.2 |
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| CDS CAA 72 bp | GCCGTGAACCAGGTACTGATAACTATTGACAACAGTTaGGAAAGCTTCACTGAATTGCTGGTCTTGATGACT | + |
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Preference number: 6 (lower is better) Translates to: AVNQVLITIDNS*ESFTELLVLMT Trigger: AGTCATCAAGACCAGCAATTCAGTGAAGCTTTCCAAACTGTTGTCAATAGTTATCAGTACCTGGTTCACGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CAA 90 bp | CTTTTCATCACCATGATGGTCGGTGCTATGAGTTGTTGTCGGCTCTaGATTTTACAGTTACACTTTCCAATTAGCTCAGGATTGCACACA | + |
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Preference number: 6 (lower is better) Translates to: LFITMMVGAMSCCRL*ILQLHFPISSGLHT Trigger: TGTGTGCAATCCTGAGCTAATTGGAAAGTGTAACTGTAAAATCAAGAGCCGACAACAACTCATAGCACCGACCATCATGGTGATGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CCA 72 bp | AATACGATCTCAATATTGATTTCCCCGGACTTCCAGTaGAGAAAATTCCTCAGGAAAGCAGTAACACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: NTISILISPDFQ*RKFLRKAVTLS Trigger: TGACAGTGTTACTGCTTTCCTGAGGAATTTTCTCCACTGGAAGTCCGGGGAAATCAATATTGAGATCGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CAA 72 bp | GCTTTTCATCACCATGATGGTCGGTGCTATGAGTTGTaGTCGGCTCTTGATTTTACAGTTACACTTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: AFHHHDGRCYEL*SALDFTVTLSN Trigger: ATTGGAAAGTGTAACTGTAAAATCAAGAGCCGACAACAACTCATAGCACCGACCATCATGGTGATGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CAA 72 bp | GACAACAGTTTGGAAAGCTTCACTGAATTGCTGGTCTaGATGACTTGTAGGATCTGTAAGATTTTAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: DNSLESFTELLV*MTCRICKILGS Trigger: ACTCCCTAAAATCTTACAGATCCTACAAGTCATCAAGACCAGCAATTCAGTGAAGCTTTCCAAACTGTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CAA 90 bp | ATAACTATTGACAACAGTTTGGAAAGCTTCACTGAATTGCTGGTCTaGATGACTTGTAGGATCTGTAAGATTTTAGGGAGTTCGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: ITIDNSLESFTELLV*MTCRICKILGSSSN Trigger: GTTGCTCGAACTCCCTAAAATCTTACAGATCCTACAAGTCATCAAGACCAGCAATTCAGTGAAGCTTTCCAAACTGTTGTCAATAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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| CDS CAA 72 bp | AAGAAAGCGTTGAAACTCAAATCCACATGGACAATTTaGTCTTCATATGAAGAACACCTTCGAACAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: KKALKLKSTWTI*SSYEEHLRTGS Trigger: GGATCCTGTTCGAAGGTGTTCTTCATATGAAGACAAAATTGTCCATGTGGATTTGAGTTTCAACGCTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098858.11 |
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