Pregenerated sensors for KCNS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043673Ensembl transcript IDs: ENSMUST00000055673.2, ENSMUST00000164495.9, ENSMUST00000217974.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCTTGGGAGCACATTACCAACTGAACTATCACCTAAGGAGCCATaGAAACTTCTCGCTATTCGGACAGAAGCAGGTCCTTCTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HLGSTLPTELSPKEP*KLLAIRTEAGPSKP Trigger: TGGCTTAGAAGGACCTGCTTCTGTCCGAATAGCGAGAAGTTTTCATGGCTCCTTAGGTGATAGTTCAGTTGGTAATGTGCTCCCAAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| 3UTR TCA 90 bp | TCTTCAATAGCATCTATCTTTGTAAGACAGGGTCTTTCATTGATCTaGGATTCACCAAGTAGGCTAGGCTGGCCAGCAAATAAGCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: SSIASIFVRQGLSLI*DSPSRLGWPANKPN Trigger: ATTGGGCTTATTTGCTGGCCAGCCTAGCCTACTTGGTGAATCTCAGATCAATGAAAGACCCTGTCTTACAAAGATAGATGCTATTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| 3UTR GCA 90 bp | ATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATaGATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCA | + |
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Preference number: 1 (lower is better) Translates to: MNMDLHALSHVVDLT*MSSSSVSWASALSS Trigger: TGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR TCA 90 bp | TGCAATTATACACATGCAACACCATGCCTGACTTTTGTTTTTCACTaGGTATTAAACTCGGGTCACCTTGGGAGCACATTACCAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: CNYTHATPCLTFVFH*VLNSGHLGSTLPTE Trigger: TTCAGTTGGTAATGTGCTCCCAAGGTGACCCGAGTTTAATACTCAGTGAAAAACAAAAGTCAGGCATGGTGTTGCATGTGTATAATTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| 3UTR CCA 90 bp | CTCCATACCAAATTAGAAGTTTATTGGGCTCCTAATTCCCATGTCTaGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: LHTKLEVYWAPNSHV*NMNMDLHALSHVVD Trigger: ATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055673.2 ENSMUST00000217974.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCTCCTAATTCCCATGTCTGGTCATCTTCAGTCAGCTaGGCCTCTGCTCTATCATCA | + |
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Preference number: 2 (lower is better) Translates to: GSLHTKLEVYWAPNSHVWSSSVS*ASALSS Trigger: TGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGA...CCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAGACTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCAATGGCAAATATAGAATaGTGCGTAAGCCGTAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VDLTCMSSSSVSWASALSMANIE*CVSRSN Trigger: ATTGCTACGGCTTACGCATCATTCTATATTTGCCAT...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR-3UTR GCA 90 bp | GCACATTACCAACTGAACTATCACCTAAGGAGCCATGAAAACTTCTCGCTATTCAGTCAGCTGGGCCTCTaGTCTATCATCAGTAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: AHYQLNYHLRSHENFSLFSQLGL*SIISNL Trigger: TAAATTACTGATGATAGAGCAGAGGCCCAGCTGACT...GAATAGCGAGAAGTTTTCATGGCTCCTTAGGTGATAGTTCAGTTGGTAATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| 3UTR CAA 90 bp | GCTCCTAATTCCCATGTCTGGAACATGAACATGGATTTACATGCATaGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: APNSHVWNMNMDLHA*SHVVDLTCMSSSSV Trigger: GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGACATGGGAATTAGGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCATGGCAAATATAGAATaGTGCGTAAGCCGTAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: HALSHVVDLTCMSSSSVSMANIE*CVSRSN Trigger: ATTGCTACGGCTTACGCATCATTCTATATTTGCCAT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGTCATCTTCAGTCAGCTaGGCCTCTGCTCTATCATCA | + |
|
Preference number: 2 (lower is better) Translates to: LEHEHGFTCIVSCCRSYMSSSVS*ASALSS Trigger: TGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGA...CATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTATGGCAAATATAGAATaGTGCGTAAGCCGTAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: MDLHALSHVVDLTCMSSSMANIE*CVSRSN Trigger: ATTGCTACGGCTTACGCATCATTCTATATTTGCCAT...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR GCA 72 bp | GATTTACATGCATTGTCTCATGTTGTAGATCTTACATaGATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: DLHALSHVVDLT*MSSSSVSWASA Trigger: AGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| 3UTR TCA 72 bp | ACACATGCAACACCATGCCTGACTTTTGTTTTTCACTaGGTATTAAACTCGGGTCACCTTGGGAGCACATTA | + |
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Preference number: 3 (lower is better) Translates to: THATPCLTFVFH*VLNSGHLGSTL Trigger: TAATGTGCTCCCAAGGTGACCCGAGTTTAATACTCAGTGAAAAACAAAAGTCAGGCATGGTGTTGCATGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| 3UTR CCA 72 bp | AAACAAGGCAGTCTCCATACCAAATTAGAAGTTTATTaGGCTCCTAATTCCCATGTCTGGAACATGAACATG | + |
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Preference number: 3 (lower is better) Translates to: KQGSLHTKLEVY*APNSHVWNMNM Trigger: CATGTTCATGTTCCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAGACTGCCTTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| CDS-3UTR CCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTACACACAGCTCCAGAATaGCCTCCTCAGAGTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALHTAPE*PPQSGR Trigger: CCTGCCACTCTGAGGAGGCCATTCTGGAGCTGTGTG...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAAACTGTGCCTCAGTGTaGCCCCAAGAGACCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LTCMSSSSVSWASALSSVNCASV*PQETEA Trigger: GGCTTCGGTCTCTTGGGGCCACACTGAGGCACAGTT...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | AGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAACTGTGCCTCAGTGTaGCCCCAAGAGACCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RSYMHVVIFSQLGLCSIINCASV*PQETEA Trigger: GGCTTCGGTCTCTTGGGGCCACACTGAGGCACAGTT...GATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTAAACTGTGCCTCAGTGTaGCCCCAAGAGACCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALNCASV*PQETEA Trigger: GGCTTCGGTCTCTTGGGGCCACACTGAGGCACAGTT...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCACGAAGCCCTACAGAGTaGCGGGCAAGCTTCAGAATT | + |
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Preference number: 4 (lower is better) Translates to: VDLTCMSSSSVSWASALSRSPTE*RASFRI Trigger: AATTCTGAAGCTTGCCCGGCACTCTGTAGGGCTTCG...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | AGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCCGAAGCCCTACAGAGTaGCGGGCAAGCTTCAGAATT | + |
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Preference number: 4 (lower is better) Translates to: RSYMHVVIFSQLGLCSIIRSPTE*RASFRI Trigger: AATTCTGAAGCTTGCCCGGCACTCTGTAGGGCTTCG...GATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | ATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAATTTATAGTTCCCAGTCCTTGTCGTaGCTCTCCTCCTTGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MSSSSVSWASALSSVIYSSQSLS*LSSLRS Trigger: GGAGCGCAAGGAGGAGAGCCACGACAAGGACTGGGA...ACTATAAATTACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATGCTGTGCACACACATaGCCACTATGGAAGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALCCAHT*PLWKPA Trigger: TGCTGGCTTCCATAGTGGCCATGTGTGTGCACAGCA...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR TCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATTCGGAAAATCCTCATaGGCCGAAGGATCTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: VDLTCMSSSSVSWASALSFGKSS*AEGSGP Trigger: TGGTCCAGATCCTTCGGCTCATGAGGATTTTCCGAA...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR TCA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAAGATGGGGATGCTGGTaGGACTGGACTTGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LTCMSSSSVSWASALSSVRWGCW*DWTCVH Trigger: ATGAACACAAGTCCAGTCTCACCAGCATCCCCATCT...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTACTGTGCTCACATCGTTaGTTTTCTGGTCCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALLCSHR*FSGPSP Trigger: AGGACTGGGACCAGAAAAGCAACGATGTGAGCACAG...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCTCCATCCTCGTTCTaGAATTCCGACATGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALSPSSF*NSDMLC Trigger: GCACAGCATGTCGGAATTCCAGAACGAGGATGGAGA...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | AGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCTCTCCATCCTCGTTCTaGAATTCCGACATGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RSYMHVVIFSQLGLCSIISPSSF*NSDMLC Trigger: GCACAGCATGTCGGAATTCCAGAACGAGGATGGAGA...GATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCAATGAGCCGAAGGATCTaGACCACCTTGCCCATATTC | + |
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Preference number: 4 (lower is better) Translates to: VDLTCMSSSSVSWASALSMSRRI*TTLPIF Trigger: GAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCAT...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCATGGCACTTCTCTGGTaGGTCCTCGCTGCACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSMALLW*VLAALV Trigger: GACCAGTGCAGCGAGGACCCACCAGAGAAGTGCCAT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR TCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTACGCAGGAGTGTACTTTaGTCCACAGACTGCTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALRRSVL*STDCLK Trigger: CTTTAAGCAGTCTGTGGATCAAAGTACACTCCTGCG...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAAATTCCGACATGCTGTaGACACACATGGCCACTATG | + |
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Preference number: 4 (lower is better) Translates to: LTCMSSSSVSWASALSSVNSDML*THMATM Trigger: CATAGTGGCCATGTGTGTGCACAGCATGTCGGAATT...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCAAATTCCGACATGCTGTaGACACACATGGCCACTATG | + |
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Preference number: 4 (lower is better) Translates to: VDLTCMSSSSVSWASALSNSDML*THMATM Trigger: CATAGTGGCCATGTGTGTGCACAGCATGTCGGAATT...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTACTCACCAGTAAACCATaGAATGCAGGCAATCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VVDLTCMSSSSVSWASALLTSKP*NAGNLH Trigger: GTGGAGATTGCCTGCATTGCATGGTTTACTGGTGAG...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | AGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCCTCACCAGTAAACCATaGAATGCAGGCAATCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RSYMHVVIFSQLGLCSIILTSKP*NAGNLH Trigger: GTGGAGATTGCCTGCATTGCATGGTTTACTGGTGAG...GATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCAGGATCTGGACCACCTTaGCCATATTCTCAATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VDLTCMSSSSVSWASALSGSGPP*PYSQCP Trigger: AGGACATTGAGAATATGGGCAAGGTGGTCCAGATCC...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCCAGCAAATAAGCCCAATTTTGCAATTATACACATGCAACACCATGCCTCGAAGCCCTACAGAGTaGCGGGCAAGCTTCAGAATT | + |
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Preference number: 4 (lower is better) Translates to: AGQQISPILQLYTCNTMPRSPTE*RASFRI Trigger: AATTCTGAAGCTTGCCCGGCACTCTGTAGGGCTTCG...AGGCATGGTGTTGCATGTGTATAATTGCAAAATTGGGCTTATTTGCTGGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| CDS-3UTR CCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCATGGCCTCCTCAGAGTaGCAGGTAAGCAGCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSMASSE*QVSSFP Trigger: GGGAAAGCTGCTTACCTGCCACTCTGAGGAGGCCAT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR TCA 90 bp | GCACATTACCAACTGAACTATCACCTAAGGAGCCATGAAAACTTCTCGCTATTCTTTTCCCAGCTAAGGTaGCTGGGTGGGTGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: AHYQLNYHLRSHENFSLFFSQLR*LGGCLH Trigger: ATGGAGACACCCACCCAGTCACCTTAGCTGGGAAAA...GAATAGCGAGAAGTTTTCATGGCTCCTTAGGTGATAGTTCAGTTGGTAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| CDS-3UTR TCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTTTTCCCAGCTAAGGTaGCTGGGTGGGTGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSFSQLR*LGGCLH Trigger: ATGGAGACACCCACCCAGTCACCTTAGCTGGGAAAA...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR GCA 90 bp | GGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCTCCTAATTCCCATGTCTGGTCTGGAATTCCGACATaGTGTGCACACACATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSLHTKLEVYWAPNSHVWSGIPT*CAHTWP Trigger: TGGCCATGTGTGTGCACAGCATGTCGGAATTCCAGA...CCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAGACTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| CDS-3UTR CCA 90 bp | CTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGTCCCAGTCCTTGTCGTaGCTCTCCTCCTTGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LEHEHGFTCIVSCCRSYMSQSLS*LSSLRS Trigger: GGAGCGCAAGGAGGAGAGCCACGACAAGGACTGGGA...CATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTACGACAGGCAGTAAGCTaGATTTTCCATTCGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: LTCMSSSSVSWASALSSVRQAVS*IFHSNP Trigger: TGGATTCGAATGGAAAATCCAGCTTACTGCCTGTCG...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CCA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCACGACAGGCAGTAAGCTaGATTTTCCATTCGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDLTCMSSSSVSWASALSRQAVS*IFHSNP Trigger: TGGATTCGAATGGAAAATCCAGCTTACTGCCTGTCG...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGCTGTGCACACACATaGCCACTATGGAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSCCAHT*PLWKPA Trigger: TGCTGGCTTCCATAGTGGCCATGTGTGTGCACAGCA...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCAGCAAATAAGCCCAATTTTGCAATTATACACATGCAACACCATGCCTTCTCCATCCTCGTTCTaGAATTCCGACATGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGQQISPILQLYTCNTMPSPSSF*NSDMLC Trigger: GCACAGCATGTCGGAATTCCAGAACGAGGATGGAGA...AGGCATGGTGTTGCATGTGTATAATTGCAAAATTGGGCTTATTTGCTGGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR CCA 90 bp | CATTACCAACTGAACTATCACCTAAGGAGCCATGAAAACTTCTCGCTATTCGGAAAGTACGGTAGCTCATaGCACTTCTCTGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HYQLNYHLRSHENFSLFGKYGSS*HFSGGS Trigger: GGACCCACCAGAGAAGTGCCATGAGCTACCGTACTT...TCCGAATAGCGAGAAGTTTTCATGGCTCCTTAGGTGATAGTTCAGTTGGTAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR TCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCAGATGGGGATGCTGGTaGGACTGGACTTGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSRWGCW*DWTCVH Trigger: ATGAACACAAGTCCAGTCTCACCAGCATCCCCATCT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCCTGTGCTCACATCGTTaGTTTTCTGGTCCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSLCSHR*FSGPSP Trigger: AGGACTGGGACCAGAAAAGCAACGATGTGAGCACAG...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTCTGGAATTCCGACATaGTGTGCACACACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSSGIPT*CAHTWP Trigger: TGGCCATGTGTGTGCACAGCATGTCGGAATTCCAGA...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCTCCTAATTCCCATGTCTGGGGATCTGGACCACCTTaGCCATATTCTCAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLHTKLEVYWAPNSHVWGSGPP*PYSQCP Trigger: AGGACATTGAGAATATGGGCAAGGTGGTCCAGATCC...CCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAGACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACACACACAGCTCCAGAATaGCCTCCTCAGAGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWNMNMDLHALSHVVDLTHTAPE*PPQSGR Trigger: CCTGCCACTCTGAGGAGGCCATTCTGGAGCTGTGTG...TGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | CATAAGAACATAGAAACAAGGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCTCCTCCTTGCGCTCCTaGTACCGACTGCTACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKNIETRQSPYQIRSLLGSSLRS*YRLLQQ Trigger: CTGCTGTAGCAGTCGGTACCAGGAGCGCAAGGAGGA...GCCCAATAAACTTCTAATTTGGTATGGAGACTGCCTTGTTTCTATGTTCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR CCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCACATCGTTGCTTTTCTaGTCCCAGTCCTTGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSTSLLF*SQSLSW Trigger: CCACGACAAGGACTGGGACCAGAAAAGCAACGATGT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | CATTACCAACTGAACTATCACCTAAGGAGCCATGAAAACTTCTCGCTATTCGGAATGAGCCGAAGGATCTaGACCACCTTGCCCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: HYQLNYHLRSHENFSLFGMSRRI*TTLPIF Trigger: GAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCAT...TCCGAATAGCGAGAAGTTTTCATGGCTCCTTAGGTGATAGTTCAGTTGGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR CCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCATGAGCCGAAGGATCTaGACCACCTTGCCCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSMSRRI*TTLPIF Trigger: GAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCAT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTATGGCACTTCTCTGGTaGGTCCTCGCTGCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSMALLW*VLAALV Trigger: GACCAGTGCAGCGAGGACCCACCAGAGAAGTGCCAT...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACAATGGCACTTCTCTGGTaGGTCCTCGCTGCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VWNMNMDLHALSHVVDLTMALLW*VLAALV Trigger: GACCAGTGCAGCGAGGACCCACCAGAGAAGTGCCAT...TGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCCTCACCAGTAAACCATaGAATGCAGGCAATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSLTSKP*NAGNLH Trigger: GTGGAGATTGCCTGCATTGCATGGTTTACTGGTGAG...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGATGGCCTCCTCAGAGTaGCAGGTAAGCAGCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHEHGFTCIVSCCRSYMMASSE*QVSSFP Trigger: GGGAAAGCTGCTTACCTGCCACTCTGAGGAGGCCAT...CATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | TTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCCCCCCACGTTCAAGTTaGCAAGTTCCTCATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHALSHVVDLTCMSSSSVPPRSS*QVPHLV Trigger: GACAAGATGAGGAACTTGTCAACTTGAACGTGGGGG...GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCATCTTCTTTCGGAGCTaGCCAAATCTCAGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HALSHVVDLTCMSSSSVSIFFRS*PNLSSS Trigger: TGATGAGCTGAGATTTGGTCAGCTCCGAAAGAAGAT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAATTTATAGTATCTTCTTTCGGAGCTaGCCAAATCTCAGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSSSVSWASALSSVIYSIFFRS*PNLSSS Trigger: TGATGAGCTGAGATTTGGTCAGCTCCGAAAGAAGAT...ACTATAAATTACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGCATATTTGAAGAGAAAAACGCATGTACATGCACATGTGTATGTACAGGATTCGGAAAATCCTCATaGGCCGAAGGATCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGIFEEKNACTCTCVCTGFGKSS*AEGSGP Trigger: TGGTCCAGATCCTTCGGCTCATGAGGATTTTCCGAA...TCCTGTACATACACATGTGCATGTACATGCGTTTTTCTCTTCAAATATGCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR TCA 90 bp | TTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCTTCGGAAAATCCTCATaGGCCGAAGGATCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHALSHVVDLTCMSSSSVFGKSS*AEGSGP Trigger: TGGTCCAGATCCTTCGGCTCATGAGGATTTTCCGAA...GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTTTTCCCAGCTAAGGTaGCTGGGTGGGTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSFSQLR*LGGCLH Trigger: ATGGAGACACCCACCCAGTCACCTTAGCTGGGAAAA...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | TTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCCTGTGCTCACATCGTTaGTTTTCTGGTCCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHALSHVVDLTCMSSSSVLCSHR*FSGPSP Trigger: AGGACTGGGACCAGAAAAGCAACGATGTGAGCACAG...GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | GCACATTACCAACTGAACTATCACCTAAGGAGCCATGAAAACTTCTCGCTATTCCGACAGGCAGTAAGCTaGATTTTCCATTCGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHYQLNYHLRSHENFSLFRQAVS*IFHSNP Trigger: TGGATTCGAATGGAAAATCCAGCTTACTGCCTGTCG...GAATAGCGAGAAGTTTTCATGGCTCCTTAGGTGATAGTTCAGTTGGTAATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTGCTGTGCACACACATaGCCACTATGGAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSCCAHT*PLWKPA Trigger: TGCTGGCTTCCATAGTGGCCATGTGTGTGCACAGCA...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACAAAGTACGGTAGCTCATaGCACTTCTCTGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWNMNMDLHALSHVVDLTKYGSS*HFSGGS Trigger: GGACCCACCAGAGAAGTGCCATGAGCTACCGTACTT...TGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTCCCCCACGTTCAAGTTaGCAAGTTCCTCATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSPPRSS*QVPHLV Trigger: GACAAGATGAGGAACTTGTCAACTTGAACGTGGGGG...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACACCCCCACGTTCAAGTTaGCAAGTTCCTCATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VWNMNMDLHALSHVVDLTPPRSS*QVPHLV Trigger: GACAAGATGAGGAACTTGTCAACTTGAACGTGGGGG...TGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | TTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCCGCAGGAGTGTACTTTaGTCCACAGACTGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHALSHVVDLTCMSSSSVRRSVL*STDCLK Trigger: CTTTAAGCAGTCTGTGGATCAAAGTACACTCCTGCG...GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTAGATGGGGATGCTGGTaGGACTGGACTTGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSRWGCW*DWTCVH Trigger: ATGAACACAAGTCCAGTCTCACCAGCATCCCCATCT...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGTCTGGAATTCCGACATaGTGTGCACACACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEHEHGFTCIVSCCRSYMSGIPT*CAHTWP Trigger: TGGCCATGTGTGTGCACAGCATGTCGGAATTCCAGA...CATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CCA 90 bp | CATAAGAACATAGAAACAAGGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCACATCGTTGCTTTTCTaGTCCCAGTCCTTGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKNIETRQSPYQIRSLLGTSLLF*SQSLSW Trigger: CCACGACAAGGACTGGGACCAGAAAAGCAACGATGT...GCCCAATAAACTTCTAATTTGGTATGGAGACTGCCTTGTTTCTATGTTCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTACATCGTTGCTTTTCTaGTCCCAGTCCTTGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSTSLLF*SQSLSW Trigger: CCACGACAAGGACTGGGACCAGAAAAGCAACGATGT...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTATCTTCTTTCGGAGCTaGCCAAATCTCAGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSIFFRS*PNLSSS Trigger: TGATGAGCTGAGATTTGGTCAGCTCCGAAAGAAGAT...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGCATATTTGAAGAGAAAAACGCATGTACATGCACATGTGTATGTACAGGAGGCATGTACTTGCTGTaGATAAACGTCCCTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGIFEEKNACTCTCVCTGGMYLL*INVPNV Trigger: AACATTAGGGACGTTTATGCACAGCAAGTACATGCC...TCCTGTACATACACATGTGCATGTACATGCGTTTTTCTCTTCAAATATGCCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
||
| CDS-3UTR GCA 90 bp | TTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCGGCATGTACTTGCTGTaGATAAACGTCCCTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHALSHVVDLTCMSSSSVGMYLL*INVPNV Trigger: AACATTAGGGACGTTTATGCACAGCAAGTACATGCC...GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| 3UTR CAA 72 bp | TCCCATGTCTGGAACATGAACATGGATTTACATGCATaGTCTCATGTTGTAGATCTTACATGCATGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHVWNMNMDLHA*SHVVDLTCMSS Trigger: TGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGACATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR GCA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTGGCATGTACTTGCTGTaGATAAACGTCCCTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MDLHALSHVVDLTCMSSSGMYLL*INVPNV Trigger: AACATTAGGGACGTTTATGCACAGCAAGTACATGCC...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS CCA 90 bp | GGAAGAGAAGCAGTAGCCCCACCTCATGGTAACTGTGCCTCAGTGTaGCCCCAAGAGACCGAAGCCCTACAGAGTGCCGGGCAAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GREAVAPPHGNCASV*PQETEALQSAGQAS Trigger: TGAAGCTTGCCCGGCACTCTGTAGGGCTTCGGTCTCTTGGGGCCACACTGAGGCACAGTTACCATGAGGTGGGGCTACTGCTTCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS GCA 90 bp | GCACAGGGTCATCCACTTCTCCATCCTCGTTCTGGAATTCCGACATaGTGTGCACACACATGGCCACTATGGAAGCCAGCACCACGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQGHPLLHPRSGIPT*CAHTWPLWKPAPRS Trigger: TGAGCGTGGTGCTGGCTTCCATAGTGGCCATGTGTGTGCACAGCATGTCGGAATTCCAGAACGAGGATGGAGAAGTGGATGACCCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CAA 90 bp | GTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATTCTGGTCCCAGTCCTaGTCGTGGCTCTCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VDLTCMSSSSVSWASALSFWSQS*SWLSSL Trigger: CAAGGAGGAGAGCCACGACAAGGACTGGGACCAGAA...TGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
||
| CDS-3UTR CAA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTATTCTGGTCCCAGTCCTaGTCGTGGCTCTCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTCMSSSSVSWASALSSVFWSQS*SWLSSL Trigger: CAAGGAGGAGAGCCACGACAAGGACTGGGACCAGAA...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS GCA 90 bp | CCAGCTCTTTCTCAAACAGAGACGATTCTTCAAAGGAGGAGTCTGTaGTCACATCGTTGCTTTTCTGGTCCCAGTCCTTGTCGTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PALSQTETILQRRSL*SHRCFSGPSPCRGS Trigger: AGAGCCACGACAAGGACTGGGACCAGAAAAGCAACGATGTGAGCACAGACTCCTCCTTTGAAGAATCGTCTCTGTTTGAGAAAGAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CCA 90 bp | GCTCAAGGAGGAGATGGCAATGAGCTTGGCCGACAGGCAGTAAGCTaGATTTTCCATTCGAATCCAGATCTTCTTTCGGAGCTGACCAAA | + |
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Preference number: 5 (lower is better) Translates to: AQGGDGNELGRQAVS*IFHSNPDLLSELTK Trigger: TTTGGTCAGCTCCGAAAGAAGATCTGGATTCGAATGGAAAATCCAGCTTACTGCCTGTCGGCCAAGCTCATTGCCATCTCCTCCTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CCA 90 bp | CGGGCAAGCTTCAGAATTCGGAAAATCCTCATGAGCCGAAGGATCTaGACCACCTTGCCCATATTCTCAATGTCCTCACTCTCTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RASFRIRKILMSRRI*TTLPIFSMSSLSSS Trigger: GGAAGAAGAGAGTGAGGACATTGAGAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCATGAGGATTTTCCGAATTCTGAAGCTTGCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCTGTGCTCACATCGTaGCTTTTCTGGTCCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VVDLTCMSSSSVSWASALSVLTS*LFWSQS Trigger: GGACTGGGACCAGAAAAGCAACGATGTGAGCACAGA...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCACTCTCTTCTTCCTaGGTGTCCACAGCCAACGTG | + |
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Preference number: 5 (lower is better) Translates to: VVDLTCMSSSSVSWASALSLSSS*VSTANV Trigger: CACGTTGGCTGTGGACACCAAGGAAGAAGAGAGTGA...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAAGGATCTGGACCACCTaGCCCATATTCTCAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: LTCMSSSSVSWASALSSVRIWTT*PIFSMS Trigger: GGACATTGAGAATATGGGCAAGGTGGTCCAGATCCT...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | AGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGGATCTGGACCACCTaGCCCATATTCTCAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: RSYMHVVIFSQLGLCSIIRIWTT*PIFSMS Trigger: GGACATTGAGAATATGGGCAAGGTGGTCCAGATCCT...GATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | CTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAGACAAGTTCCTCATCTaGTCCAGGGCGATGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: LTCMSSSSVSWASALSSVDKFLI*SRAMEK Trigger: TTTTTCCATCGCCCTGGACAAGATGAGGAACTTGTC...TACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTACCGCAGGAGTGTACTTaGATCCACAGACTGCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: VVDLTCMSSSSVSWASALPQECT*IHRLLK Trigger: TTTAAGCAGTCTGTGGATCAAAGTACACTCCTGCGG...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCTCCTAATTCCCATGTCTGGTCACTCTCTTCTTCCTaGGTGTCCACAGCCAACGTG | + |
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Preference number: 5 (lower is better) Translates to: GSLHTKLEVYWAPNSHVWSLSSS*VSTANV Trigger: CACGTTGGCTGTGGACACCAAGGAAGAAGAGAGTGA...CCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAGACTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTACTGGTGAGACTGGACTaGTGTTCATCTTTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: VVDLTCMSSSSVSWASALLVRLD*CSSFST Trigger: TGTGGAGAAAGATGAACACAAGTCCAGTCTCACCAG...TAGAGCAGAGGCCCAGCTGACTGAAGATGACGACATGCATGTAAGATCTACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | ATGTCGTCATCTTCAGTCAGCTGGGCCTCTGCTCTATCATCAGTAATTTATAGTTCTGTGCTCACATCGTaGCTTTTCTGGTCCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: MSSSSVSWASALSSVIYSSVLTS*LFWSQS Trigger: GGACTGGGACCAGAAAAGCAACGATGTGAGCACAGA...ACTATAAATTACTGATGATAGAGCAGAGGCCCAGCTGACTGAAGATGACGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCTCACTCTCTTCTTCCTaGGTGTCCACAGCCAACGTG | + |
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Preference number: 5 (lower is better) Translates to: HALSHVVDLTCMSSSSVSSLSSS*VSTANV Trigger: CACGTTGGCTGTGGACACCAAGGAAGAAGAGAGTGA...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GGCAGTCTCCATACCAAATTAGAAGTTTATTGGGCTCCTAATTCCCATGTCTGGGACAAGTTCCTCATCTaGTCCAGGGCGATGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: GSLHTKLEVYWAPNSHVWDKFLI*SRAMEK Trigger: TTTTTCCATCGCCCTGGACAAGATGAGGAACTTGTC...CCAGACATGGGAATTAGGAGCCCAATAAACTTCTAATTTGGTATGGAGACTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055673.2 |
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| CDS-3UTR CAA 90 bp | CTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGTTCTGGTCCCAGTCCTaGTCGTGGCTCTCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LEHEHGFTCIVSCCRSYMFWSQS*SWLSSL Trigger: CAAGGAGGAGAGCCACGACAAGGACTGGGACCAGAA...CATGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | CATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCAGCAGGATCTGGACCACCTaGCCCATATTCTCAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: HALSHVVDLTCMSSSSVSRIWTT*PIFSMS Trigger: GGACATTGAGAATATGGGCAAGGTGGTCCAGATCCT...GCTGACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS TCA 90 bp | CCATCACATGCAGCTTCCCTGTGTAATAAAAGTTCAAGACGTATCTaGACAGGAAGGGGTTCCGATCAAAGTAGTACTCTTTATCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PSHAASLCNKSSRRI*TGRGSDQSSTLYLP Trigger: TGGCAGATAAAGAGTACTACTTTGATCGGAACCCCTTCCTGTTCAGATACGTCTTGAACTTTTATTACACAGGGAAGCTGCATGTGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GTCTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATCTGTGCTCACATCGTaGCTTTTCTGGTCCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VWNMNMDLHALSHVVDLTSVLTS*LFWSQS Trigger: GGACTGGGACCAGAAAAGCAACGATGTGAGCACAGA...TGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | TTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTTCAGTCCCGCAGGAGTGTACTTaGATCCACAGACTGCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LHALSHVVDLTCMSSSSVPQECT*IHRLLK Trigger: TTTAAGCAGTCTGTGGATCAAAGTACACTCCTGCGG...GACTGAAGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTGACAAGTTCCTCATCTaGTCCAGGGCGATGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: MDLHALSHVVDLTCMSSSDKFLI*SRAMEK Trigger: TTTTTCCATCGCCCTGGACAAGATGAGGAACTTGTC...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | ATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACATGCATGTCGTCATCTCTGGTGAGACTGGACTaGTGTTCATCTTTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: MDLHALSHVVDLTCMSSSLVRLD*CSSFST Trigger: TGTGGAGAAAGATGAACACAAGTCCAGTCTCACCAG...AGATGACGACATGCATGTAAGATCTACAACATGAGACAATGCATGTAAATCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS-3UTR CAA 90 bp | GTCTGGAACATGAACATGGATTTACATGCATTGTCTCATGTTGTAGATCTTACACTGGTGAGACTGGACTaGTGTTCATCTTTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: VWNMNMDLHALSHVVDLTLVRLD*CSSFST Trigger: TGTGGAGAAAGATGAACACAAGTCCAGTCTCACCAG...TGTAAGATCTACAACATGAGACAATGCATGTAAATCCATGTTCATGTTCCAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CCA 72 bp | GCAGTAGCCCCACCTCATGGTAACTGTGCCTCAGTGTaGCCCCAAGAGACCGAAGCCCTACAGAGTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: AVAPPHGNCASV*PQETEALQSAG Trigger: CCCGGCACTCTGTAGGGCTTCGGTCTCTTGGGGCCACACTGAGGCACAGTTACCATGAGGTGGGGCTACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS GCA 72 bp | TTTTCTGGTCCCAGTCCTTGTCGTGGCTCTCCTCCTTaGGCTCCTGGTACCGACTGCTACAGCAGGAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: FSGPSPCRGSPP*APGTDCYSRSQ Trigger: TTGACTCCTGCTGTAGCAGTCGGTACCAGGAGCGCAAGGAGGAGAGCCACGACAAGGACTGGGACCAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS GCA 72 bp | CTCAGTGTGGCCCCAAGAGACCGAAGCCCTACAGAGTaGCGGGCAAGCTTCAGAATTCGGAAAATCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: LSVAPRDRSPTE*RASFRIRKILM Trigger: CATGAGGATTTTCCGAATTCTGAAGCTTGCCCGGCACTCTGTAGGGCTTCGGTCTCTTGGGGCCACACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS GCA 72 bp | ACGGTAGCTCATGGCACTTCTCTGGTGGGTCCTCGCTaGACTGGTCCACTTCCATGTCTTTCTGCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TVAHGTSLVGPR*TGPLPCLSASG Trigger: ACCAGAAGCAGAAAGACATGGAAGTGGACCAGTGCAGCGAGGACCCACCAGAGAAGTGCCATGAGCTACCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CAA 72 bp | GACGATTCTTCAAAGGAGGAGTCTGTGCTCACATCGTaGCTTTTCTGGTCCCAGTCCTTGTCGTGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DDSSKEESVLTS*LFWSQSLSWLS Trigger: GGAGAGCCACGACAAGGACTGGGACCAGAAAAGCAACGATGTGAGCACAGACTCCTCCTTTGAAGAATCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CAA 90 bp | TCAAACAGAGACGATTCTTCAAAGGAGGAGTCTGTGCTCACATCGTaGCTTTTCTGGTCCCAGTCCTTGTCGTGGCTCTCCTCCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SNRDDSSKEESVLTS*LFWSQSLSWLSSLR Trigger: GCGCAAGGAGGAGAGCCACGACAAGGACTGGGACCAGAAAAGCAACGATGTGAGCACAGACTCCTCCTTTGAAGAATCGTCTCTGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CAA 72 bp | CGGAAAATCCTCATGAGCCGAAGGATCTGGACCACCTaGCCCATATTCTCAATGTCCTCACTCTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RKILMSRRIWTT*PIFSMSSLSSS Trigger: GGAAGAAGAGAGTGAGGACATTGAGAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCATGAGGATTTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CAA 90 bp | TTCAGAATTCGGAAAATCCTCATGAGCCGAAGGATCTGGACCACCTaGCCCATATTCTCAATGTCCTCACTCTCTTCTTCCTTGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRIRKILMSRRIWTT*PIFSMSSLSSSLVS Trigger: GGACACCAAGGAAGAAGAGAGTGAGGACATTGAGAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCATGAGGATTTTCCGAATTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS GCA 72 bp | TCTCAAACAGAGACGATTCTTCAAAGGAGGAGTCTGTaGTCACATCGTTGCTTTTCTGGTCCCAGTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQTETILQRRSL*SHRCFSGPSPC Trigger: ACAAGGACTGGGACCAGAAAAGCAACGATGTGAGCACAGACTCCTCCTTTGAAGAATCGTCTCTGTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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| CDS CCA 72 bp | TTCAGAATTCGGAAAATCCTCATGAGCCGAAGGATCTaGACCACCTTGCCCATATTCTCAATGTCCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: FRIRKILMSRRI*TTLPIFSMSSL Trigger: GAGTGAGGACATTGAGAATATGGGCAAGGTGGTCCAGATCCTTCGGCTCATGAGGATTTTCCGAATTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055673.2 ENSMUST00000164495.9 ENSMUST00000217974.2 |
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