RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNS2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050963

Ensembl transcript IDs: ENSMUST00000072868.5, ENSMUST00000228725.2

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCCATCTGGATGGCCCTCCCTCAAGGTCTATGAAACTACTGCTTaGGGGAACTTAATGCTCCTGGGACCTTTTCATGCTCAGAAGCGA +
Preference number: 1 (lower is better)
Translates to: QPSGWPSLKVYETTA*GNLMLLGPFHAQKR
Trigger: TCGCTTCTGAGCATGAAAAGGTCCCAGGAGCATTAAGTTCCCCCAAGCAGTAGTTTCATAGACCTTGAGGGAGGGCCATCCAGATGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp TTTCCACCCTGGGTAAGCCACCTGCCTTCATGCATGTCTGCATCTTaGATATGCTCTGCACTACCAGGTTTCCATGCCAAGGCAGGAACT +
Preference number: 1 (lower is better)
Translates to: FPPWVSHLPSCMSAS*ICSALPGFHAKAGT
Trigger: AGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCATGAAGGCAGGTGGCTTACCCAGGGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 90 bp TACAGTGTTTCCACCCTGGGTAAGCCACCTGCCTTCATGCATGTCTaGATCTTGAATATGCTCTGCACTACCAGGTTTCCATGCCAAGGC +
Preference number: 1 (lower is better)
Translates to: YSVSTLGKPPAFMHV*ILNMLCTTRFPCQG
Trigger: GCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCATGAAGGCAGGTGGCTTACCCAGGGTGGAAACACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 90 bp CTCAAGCACAGCAGCGATGTAATGGCGCAGGAGCCGCCAGGACGCTaGCACAGTAGTGTGTTAATGAGTGTTAAAACTGACATCGCAAAT +
Preference number: 1 (lower is better)
Translates to: LKHSSDVMAQEPPGR*HSSVLMSVKTDIAN
Trigger: ATTTGCGATGTCAGTTTTAACACTCATTAACACACTACTGTGCCAGCGTCCTGGCGGCTCCTGCGCCATTACATCGCTGCTGTGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072868.5
3UTR GCA 90 bp GGTAAGCCACCTGCCTTCATGCATGTCTGCATCTTGAATATGCTCTaGACTACCAGGTTTCCATGCCAAGGCAGGAACTCAAGGCAATCA +
Preference number: 1 (lower is better)
Translates to: GKPPAFMHVCILNML*TTRFPCQGRNSRQS
Trigger: TGATTGCCTTGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCATGAAGGCAGGTGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp CAAATGCCCACCCTGCATGCTATGACAAAGCTTGGCCCATGTATTTaGCCCAGTAATACTGAACAGGTCAAATGCCAAGAGTGGAGTTGC +
Preference number: 1 (lower is better)
Translates to: QMPTLHAMTKLGPCI*PSNTEQVKCQEWSC
Trigger: GCAACTCCACTCTTGGCATTTGACCTGTTCAGTATTACTGGGTCAAATACATGGGCCAAGCTTTGTCATAGCATGCAGGGTGGGCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 90 bp CTTCTGATTCACAGGCGGGGTTCCTTGAAGTCAACCTCACATTCCTaGTGCTTTGGAATAATAGACATAGATGTGTCTGCACGTAGGCAC +
Preference number: 1 (lower is better)
Translates to: LLIHRRGSLKSTSHS*CFGIIDIDVSARRH
Trigger: GTGCCTACGTGCAGACACATCTATGTCTATTATTCCAAAGCAGCAGGAATGTGAGGTTGACTTCAAGGAACCCCGCCTGTGAATCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp CTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATaGGTCCACTTCATCTTGGTAGCCTTTACTCCCAAGAACACGGCA +
Preference number: 1 (lower is better)
Translates to: LCSPRKDCTGYLDHL*VHFILVAFTPKNTA
Trigger: TGCCGTGTTCTTGGGAGTAAAGGCTACCAAGATGAAGTGGACTCATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 90 bp TCCATCAGCTTCATGGTCAGTGACCATGCAATTCATGCCCAGTTATaGTATACCATCAGCCTCAGCAAACCAAACAGTCCTCACAGGTTA +
Preference number: 1 (lower is better)
Translates to: SISFMVSDHAIHAQL*YTISLSKPNSPHRL
Trigger: TAACCTGTGAGGACTGTTTGGTTTGCTGAGGCTGATGGTATACCATAACTGGGCATGAATTGCATGGTCACTGACCATGAAGCTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp ACTCTGCATCTCCTCTTTTCTTCTTTCCATCAGCTTCATGGTCAGTaGCCATGCAATTCATGCCCAGTTATGGTATACCATCAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: TLHLLFSSFHQLHGQ*PCNSCPVMVYHQPQ
Trigger: CTGAGGCTGATGGTATACCATAACTGGGCATGAATTGCATGGTCACTGACCATGAAGCTGATGGAAAGAAGAAAAGAGGAGATGCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp GATTATTTTCACATGGTTGTGATCCAAATCTCACGATATCCTTGCTaGCCTCATAGACAGATGTGTTGTCACTGGAACCCATACAGCAGC +
Preference number: 1 (lower is better)
Translates to: DYFHMVVIQISRYPC*PHRQMCCHWNPYSS
Trigger: GCTGCTGTATGGGTTCCAGTGACAACACATCTGTCTATGAGGTCAGCAAGGATATCGTGAGATTTGGATCACAACCATGTGAAAATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 90 bp ATGCATGTCTGCATCTTGAATATGCTCTGCACTACCAGGTTTCCATaGCAAGGCAGGAACTCAAGGCAATCAAACACTATACATACACTA +
Preference number: 1 (lower is better)
Translates to: MHVCILNMLCTTRFP*QGRNSRQSNTIHTL
Trigger: TAGTGTATGTATAGTGTTTGATTGCCTTGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp AGAGCAGGCAAGAAAATATTTAAGCTATTGCCCTTGCCAGCAACCTaGCAGTGCTTACCTCACAAAGACAACAAAACACAAACTTCTTCC +
Preference number: 1 (lower is better)
Translates to: RAGKKIFKLLPLPAT*QCLPHKDNKTQTSS
Trigger: GGAAGAAGTTTGTGTTTTGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAAATATTTTCTTGCCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp ATAATTATCTTCTGTTTAATCTGCATATTTGCAAGGCTGGCATCCTaGGTATGTCAGTCATGTGCCTCATTCTGGAGTCGAGGCACAAGA +
Preference number: 1 (lower is better)
Translates to: IIIFCLICIFARLAS*VCQSCASFWSRGTR
Trigger: TCTTGTGCCTCGACTCCAGAATGAGGCACATGACTGACATACTCAGGATGCCAGCCTTGCAAATATGCAGATTAAACAGAAGATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072868.5
3UTR CCA 90 bp CTAAGTTACTCTGCATCTCCTCTTTTCTTCTTTCCATCAGCTTCATaGTCAGTGACCATGCAATTCATGCCCAGTTATGGTATACCATCA +
Preference number: 1 (lower is better)
Translates to: LSYSASPLFFFPSAS*SVTMQFMPSYGIPS
Trigger: TGATGGTATACCATAACTGGGCATGAATTGCATGGTCACTGACCATGAAGCTGATGGAAAGAAGAAAAGAGGAGATGCAGAGTAACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 90 bp AATGAAAGCAAGGGATACATAATTGAGATTATTTTCACATGGTTGTaGTCCAAATCTCACGATATCCTTGCTGACCTCATAGACAGATGT +
Preference number: 1 (lower is better)
Translates to: NESKGYIIEIIFTWL*SKSHDILADLIDRC
Trigger: ACATCTGTCTATGAGGTCAGCAAGGATATCGTGAGATTTGGATCACAACCATGTGAAAATAATCTCAATTATGTATCCCTTGCTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACACAGTGTTTCCACCCTaGGTAAGCCACCTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNTVFPP*VSHLPS
Trigger: TGAAGGCAGGTGGCTTACCCAGGGTGGAAACACTGT...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGAGGGCTTATGTCCCATaGAGCTCTCCCTCTAGGGCA +
Preference number: 2 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHRRAYVP*SSPSRA
Trigger: TGCCCTAGAGGGAGAGCTGCATGGGACATAAGCCCT...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCGTCTATGGAGATCACTaGAGAGCCCAGCCATCTGGA +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSVYGDH*RAQPSG
Trigger: TCCAGATGGCTGGGCTCTGCAGTGATCTCCATAGAC...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CAA 90 bp GTTTCCACCCTGGGTAAGCCACCTGCCTTCATGCATGTCTGCATCTaGAATATGCTCTGCACTACCAGGTTTCCATGCCAAGGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: VSTLGKPPAFMHVCI*NMLCTTRFPCQGRN
Trigger: GTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCATGAAGGCAGGTGGCTTACCCAGGGTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAACCCTTGCCAGCAACCTaGCAGTGCTTACCTCACAAA +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKPLPAT*QCLPHK
Trigger: TTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGG...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAGAACACGGCAGAAAATaGATCTGCTCTCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKEHGRK*ICSLLE
Trigger: CTCCAGGAGAGAGCAGATTCATTTTCTGCCGTGTTC...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp CATCTTGAATATGCTCTGCACTACCAGGTTTCCATGCCAAGGCAGGAACTCAAGAGGGCTTATGTCCCATaGAGCTCTCCCTCTAGGGCA +
Preference number: 2 (lower is better)
Translates to: HLEYALHYQVSMPRQELKRAYVP*SSPSRA
Trigger: TGCCCTAGAGGGAGAGCTGCATGGGACATAAGCCCT...CTTGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCGTCCCCTGCCTTCAGTaGAACTGGGAACAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSVPCLQ*NWEQFY
Trigger: ATAAAACTGTTCCCAGTTGCACTGAAGGCAGGGGAC...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCACAAACTTCTTCCAGTaGAGGAGAAAGACAGCACGG +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSTNFFQ*RRKTAR
Trigger: CCGTGCTGTCTTTCTCCTCCACTGGAAGAAGTTTGT...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp CATCTTGAATATGCTCTGCACTACCAGGTTTCCATGCCAAGGCAGGAACTCAAGCCCTTGCCAGCAACCTaGCAGTGCTTACCTCACAAA +
Preference number: 2 (lower is better)
Translates to: HLEYALHYQVSMPRQELKPLPAT*QCLPHK
Trigger: TTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGG...CTTGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTTGCATGTCTGCATCTTaGATATGCTCTGCACTACCA +
Preference number: 2 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATCMSAS*ICSALP
Trigger: TGGTAGTGCAGAGCATATTCAAGATGCAGACATGCA...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTCCAACTCCTGTCTTCTaGTTCACAGGCGGGGTTCCT +
Preference number: 2 (lower is better)
Translates to: NLGNAELGWETQPQTNVSPTPVF*FTGGVP
Trigger: AGGAACCCCGCCTGTGAATCAGAAGACAGGAGTTGG...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCACTTCACTGAGAGGTaGAAAGGCATGTTATTAGAC +
Preference number: 2 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNHFTER*KGMLLD
Trigger: GTCTAATAACATGCCTTTGCACCTCTCAGTGAAGTG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCTGCATTGGTCAAGTGTaGTTAGCTTTGCGATCTCTC +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSCIGQV*LALRSL
Trigger: GAGAGATCGCAAAGCTAAGCACACTTGACCAATGCA...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAATTGGGATTCCCCCAATaGAAGGCACCAGATAAAACA +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKLGFPQ*KAPDKT
Trigger: TGTTTTATCTGGTGCCTTTCATTGGGGGAATCCCAA...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAATGCATTGGTCAAGTGTaGTTAGCTTTGCGATCTCTC +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKCIGQV*LALRSL
Trigger: GAGAGATCGCAAAGCTAAGCACACTTGACCAATGCA...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTACAGTGTTTCCACCCTaGGTAAGCCACCTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: NLGNAELGWETQPQTNVSTVFPP*VSHLPS
Trigger: TGAAGGCAGGTGGCTTACCCAGGGTGGAAACACTGT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCTTTCCATCAGCTTCATaGTCAGTGACCATGCAATTC +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSFPSAS*SVTMQF
Trigger: GAATTGCATGGTCACTGACCATGAAGCTGATGGAAA...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATGCCCAGCCATCTGGATaGCCCTCCCTCAAGGTCTAT +
Preference number: 2 (lower is better)
Translates to: CIYCVPQERIVQATLIIYAQPSG*PSLKVY
Trigger: ATAGACCTTGAGGGAGGGCCATCCAGATGGCTGGGC...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACACACAGCTTAATGGTTaGAAGGGTTGTTTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNTQLNG*KGCLLF
Trigger: AAACAACAAACAACCCTTTCAACCATTAAGCTGTGT...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACATGTTTTGTGTTAACTaGACAGTGTGTTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNMFCVN*TVCWKR
Trigger: CCTTTTCCAACACACTGTTCAGTTAACACAAAACAT...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCTACCTTGATCATCTATaGGTCCACTTCATCTTGGTA +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSYLDHL*VHFILV
Trigger: TACCAAGATGAAGTGGACTCATAGATGATCAAGGTA...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACACCTCACATTCCTGCTaGTTTGGAATAATAGACATA +
Preference number: 2 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNTSHSC*FGIIDI
Trigger: TATGTCTATTATTCCAAAGCAGCAGGAATGTGAGGT...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCTCAACCTCACATTCCTaGTGCTTTGGAATAATAGAC +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSSTSHS*CFGIID
Trigger: GTCTATTATTCCAAAGCAGCAGGAATGTGAGGTTGA...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACAGTGGACAGAGAAATTaGCATTCTAGATACTCATCT +
Preference number: 2 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNSGQRN*HSRYSS
Trigger: AGATGAGTATCTAGAATGCCAATTTCTCTGTCCACT...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCGAATACTGTACACAGTaGACAGAGAAATTGGCATTC +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSEYCTQ*TEKLAF
Trigger: GAATGCCAATTTCTCTGTCCACTGTGTACAGTATTC...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCAAACTTTGGTCAAAATaGCCTGGATTGAGCATCTCA +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSKLWSK*PGLSIS
Trigger: TGAGATGCTCAATCCAGGCCATTTTGACCAAAGTTT...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAATGCCTTCAGTGCAACTaGGAACAGTTTTATACATCC +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKCLQCN*EQFYTS
Trigger: GGATGTATAAAACTGTTCCCAGTTGCACTGAAGGCA...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAATATGAAACTACTGCTTaGGGGAACTTAATGCTCCTG +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKYETTA*GNLMLL
Trigger: CAGGAGCATTAAGTTCCCCCAAGCAGTAGTTTCATA...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTGAATCTGCTCTCTCCTaGAGGAGAAACTACCATGGG +
Preference number: 2 (lower is better)
Translates to: NLGNAELGWETQPQTNVSESALS*RRNYHG
Trigger: CCCATGGTAGTTTCTCCTCCAGGAGAGAGCAGATTC...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCAACCTCTCTAAACATTaGAAAAGCAATCTAGGGCTT +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSNLSKH*KSNLGL
Trigger: AAGCCCTAGATTGCTTTTGCAATGTTTAGAGAGGTT...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCAACAAGAGTTCCATATaGAAACTCCCAAAACCAACT +
Preference number: 2 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSNKSSI*KLPKPT
Trigger: AGTTGGTTTTGGGAGTTTGCATATGGAACTCTTGTT...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAGAATACTGTACACAGTaGACAGAGAAATTGGCATTC +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKEYCTQ*TEKLAF
Trigger: GAATGCCAATTTCTCTGTCCACTGTGTACAGTATTC...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp TTAAGCTATTGCCCTTGCCAGCAACCTGACAGTGCTTACCTCACAAAGACAACACAAAATGGCCTGGATTaGGCATCTCAGCCAGAAATA +
Preference number: 2 (lower is better)
Translates to: LSYCPCQQPDSAYLTKTTQNGLD*ASQPEI
Trigger: TATTTCTGGCTGAGATGCTCAATCCAGGCCATTTTG...TGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAATGGATTGTCCTTAACTaGCTAAAACACAAAATGGAC +
Preference number: 2 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKWIVLN*LKHKMD
Trigger: GTCCATTTTGTGTTTTAGTCAGTTAAGGACAATCCA...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TTTTGCCATGATGCAAACACCAGTGAGTGTCACTTCACTGAGAGGTGCAAAGGCAGGGATGATTTCTTATaGCACAGCCCTAAAATTGCC +
Preference number: 2 (lower is better)
Translates to: FCHDANTSECHFTERCKGRDDFL*HSPKIA
Trigger: GGCAATTTTAGGGCTGTGGCATAAGAAATCATCCCT...GCCTTTGCACCTCTCAGTGAAGTGACACTCACTGGTGTTTGCATCATGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTCACTTCACTGAGAGGTaGAAAGGCATGTTATTAGAC +
Preference number: 2 (lower is better)
Translates to: HTAASEIGAQTIPLTGNAHFTER*KGMLLD
Trigger: GTCTAATAACATGCCTTTGCACCTCTCAGTGAAGTG...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CAA 90 bp TGCACATCACAAGGACAGGACCAAGTAGAAAGACAACTCGAAGATTaGCATTGGTCAAGTGTGCTTAGCTTTGCGATCTCTCTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: CTSQGQDQVERQLED*HWSSVLSFAISLFW
Trigger: CCAAAACAGAGAGATCGCAAAGCTAAGCACACTTGACCAATGCAAATCTTCGAGTTGTCTTTCTACTTGGTCCTGTCCTTGTGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTAGACATTATCTGACTTaGCTAGTCAGAGGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: NLGNAELGWETQPQTNVSRHYLT*LVRGFV
Trigger: CACAAAGCCTCTGACTAGTCAAGTCAGATAATGTCT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp CATCTTGAATATGCTCTGCACTACCAGGTTTCCATGCCAAGGCAGGAACTCAAGGACAACTCGAAGATTTaGATTGGTCAAGTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: HLEYALHYQVSMPRQELKDNSKI*IGQVCL
Trigger: TAAGCACACTTGACCAATGCAAATCTTCGAGTTGTC...CTTGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATACAAACTTCTTCCAGTaGAGGAGAAAGACAGCACGG +
Preference number: 2 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHTNFFQ*RRKTAR
Trigger: CCGTGCTGTCTTTCTCCTCCACTGGAAGAAGTTTGT...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR TCA 90 bp TTAAGCTATTGCCCTTGCCAGCAACCTGACAGTGCTTACCTCACAAAGACAACAGGTAATGCTGGGATATaGGCATTAGAATACTGTACA +
Preference number: 2 (lower is better)
Translates to: LSYCPCQQPDSAYLTKTTGNAGI*ALEYCT
Trigger: TGTACAGTATTCTAATGCTCATATCCCAGCATTACC...TGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATAGGGATGATTTCTTATaGCACAGCCCTAAAATTGCC +
Preference number: 2 (lower is better)
Translates to: CIYCVPQERIVQATLIIYRDDFL*HSPKIA
Trigger: GGCAATTTTAGGGCTGTGGCATAAGAAATCATCCCT...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATATCTTGAATATGCTCTaGACTACCAGGTTTCCATGC +
Preference number: 2 (lower is better)
Translates to: CIYCVPQERIVQATLIIYILNML*TTRFPC
Trigger: GCATGGAAACCTGGTAGTGCAGAGCATATTCAAGAT...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTAACAAGAGTTCCATATaGAAACTCCCAAAACCAACT +
Preference number: 2 (lower is better)
Translates to: NLGNAELGWETQPQTNVSNKSSI*KLPKPT
Trigger: AGTTGGTTTTGGGAGTTTGCATATGGAACTCTTGTT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TTAAGCTATTGCCCTTGCCAGCAACCTGACAGTGCTTACCTCACAAAGACAACAAGTGGACAGAGAAATTaGCATTCTAGATACTCATCT +
Preference number: 2 (lower is better)
Translates to: LSYCPCQQPDSAYLTKTTSGQRN*HSRYSS
Trigger: AGATGAGTATCTAGAATGCCAATTTCTCTGTCCACT...TGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATTTTCCATCAGCTTCATaGTCAGTGACCATGCAATTC +
Preference number: 2 (lower is better)
Translates to: CIYCVPQERIVQATLIIYFPSAS*SVTMQF
Trigger: GAATTGCATGGTCACTGACCATGAAGCTGATGGAAA...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR GCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATTCAACCTCACATTCCTaGTGCTTTGGAATAATAGAC +
Preference number: 2 (lower is better)
Translates to: CIYCVPQERIVQATLIIYSTSHS*CFGIID
Trigger: GTCTATTATTCCAAAGCAGCAGGAATGTGAGGTTGA...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATATGAAAGATCTGAACTaGAGGCTCAAGGGCATTAAA +
Preference number: 2 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHMKDLN*RLKGIK
Trigger: TTTAATGCCCTTGAGCCTCCAGTTCAGATCTTTCAT...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTAGTTTTATACATCCTTaGTCTTCTAGTGCTGAAGAT +
Preference number: 2 (lower is better)
Translates to: NLGNAELGWETQPQTNVSSFIHP*SSSAED
Trigger: ATCTTCAGCACTAGAAGACCAAGGATGTATAAAACT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CAA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGTAGGCACTAGGAGGTaGCCACCTTCTGCCCCTCAT +
Preference number: 3 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATVGTRR*PPSAPH
Trigger: ATGAGGGGCAGAAGGTGGCAACCTCCTAGTGCCTAC...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp GTCTATGGAGATCACTGCAGAGCCCAGCCATCTGGATaGCCCTCCCTCAAGGTCTATGAAACTACTGCTTGG +
Preference number: 3 (lower is better)
Translates to: VYGDHCRAQPSG*PSLKVYETTAW
Trigger: CCAAGCAGTAGTTTCATAGACCTTGAGGGAGGGCCATCCAGATGGCTGGGCTCTGCAGTGATCTCCATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp GGTTCCCAGGGCCTTTACACCATTCTTTATGGTCTATaGAGATCACTGCAGAGCCCAGCCATCTGGATGGCC +
Preference number: 3 (lower is better)
Translates to: GSQGLYTILYGL*RSLQSPAIWMA
Trigger: GGCCATCCAGATGGCTGGGCTCTGCAGTGATCTCCATAGACCATAAAGAATGGTGTAAAGGCCCTGGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp AGCAGCGATGTAATGGCGCAGGAGCCGCCAGGACGCTaGCACAGTAGTGTGTTAATGAGTGTTAAAACTGAC +
Preference number: 3 (lower is better)
Translates to: SSDVMAQEPPGR*HSSVLMSVKTD
Trigger: GTCAGTTTTAACACTCATTAACACACTACTGTGCCAGCGTCCTGGCGGCTCCTGCGCCATTACATCGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072868.5
3UTR CCA 72 bp GGATGGCCCTCCCTCAAGGTCTATGAAACTACTGCTTaGGGGAACTTAATGCTCCTGGGACCTTTTCATGCT +
Preference number: 3 (lower is better)
Translates to: GWPSLKVYETTA*GNLMLLGPFHA
Trigger: AGCATGAAAAGGTCCCAGGAGCATTAAGTTCCCCCAAGCAGTAGTTTCATAGACCTTGAGGGAGGGCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp AGGGAAAGGTTCCCAGGGCCTTTACACCATTCTTTATaGTCTATGGAGATCACTGCAGAGCCCAGCCATCTG +
Preference number: 3 (lower is better)
Translates to: RERFPGPLHHSL*SMEITAEPSHL
Trigger: CAGATGGCTGGGCTCTGCAGTGATCTCCATAGACCATAAAGAATGGTGTAAAGGCCCTGGGAACCTTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp TCCTCAGCAGCCAACCTGGGAAATGCAGAACTTGGATaGGAAACACAGCCCCAGACTAATGTATCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: SSAANLGNAELG*ETQPQTNVSVP
Trigger: TGGCACAGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTTGGCTGCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp TGGGTAAGCCACCTGCCTTCATGCATGTCTGCATCTTaGATATGCTCTGCACTACCAGGTTTCCATGCCAAG +
Preference number: 3 (lower is better)
Translates to: WVSHLPSCMSAS*ICSALPGFHAK
Trigger: CTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCATGAAGGCAGGTGGCTTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 72 bp CCTGCCTTCATGCATGTCTGCATCTTGAATATGCTCTaGACTACCAGGTTTCCATGCCAAGGCAGGAACTCA +
Preference number: 3 (lower is better)
Translates to: PAFMHVCILNML*TTRFPCQGRNS
Trigger: TGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATGCAGACATGCATGAAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CAA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTAGACAACTCGAAGATTaGCATTGGTCAAGTGTGCTT +
Preference number: 3 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATRQLED*HWSSVL
Trigger: AAGCACACTTGACCAATGCAAATCTTCGAGTTGTCT...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CAA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAATCAAAATGGCCTGGATaGAGCATCTCAGCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKSKWPG*SISARN
Trigger: ATTTCTGGCTGAGATGCTCAATCCAGGCCATTTTGA...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR-3UTR CAA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTTATAACTCTTTTCTTTaGACTTCTACCCCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATYNSFL*TSTPVP
Trigger: GGGGACAGGGGTAGAAGTCAAAAGAAAAGAGTTATA...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp CTTGGTAGCCTTTACTCCCAAGAACACGGCAGAAAATaGATCTGCTCTCTCCTGGAGGAGAAACTACCATGG +
Preference number: 3 (lower is better)
Translates to: LGSLYSQEHGRK*ICSLLEEKLPW
Trigger: CCATGGTAGTTTCTCCTCCAGGAGAGAGCAGATTCATTTTCTGCCGTGTTCTTGGGAGTAAAGGCTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 72 bp ATTTGCAAGGCTGGCATCCTGAGTATGTCAGTCATGTaGCTCATTCTGGAGTCGAGGCACAAGAAACTCAAG +
Preference number: 3 (lower is better)
Translates to: ICKAGILSMSVM*LILESRHKKLK
Trigger: CTTGAGTTTCTTGTGCCTCGACTCCAGAATGAGGCACATGACTGACATACTCAGGATGCCAGCCTTGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072868.5
3UTR-3UTR CAA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAAGACAACTCGAAGATTaGCATTGGTCAAGTGTGCTT +
Preference number: 3 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKRQLED*HWSSVL
Trigger: AAGCACACTTGACCAATGCAAATCTTCGAGTTGTCT...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 72 bp AGGCGGGGTTCCTTGAAGTCAACCTCACATTCCTGCTaGTTTGGAATAATAGACATAGATGTGTCTGCACGT +
Preference number: 3 (lower is better)
Translates to: RRGSLKSTSHSC*FGIIDIDVSAR
Trigger: ACGTGCAGACACATCTATGTCTATTATTCCAAAGCAGCAGGAATGTGAGGTTGACTTCAAGGAACCCCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR GCA 72 bp CACAGGCGGGGTTCCTTGAAGTCAACCTCACATTCCTaGTGCTTTGGAATAATAGACATAGATGTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: HRRGSLKSTSHS*CFGIIDIDVSA
Trigger: TGCAGACACATCTATGTCTATTATTCCAAAGCAGCAGGAATGTGAGGTTGACTTCAAGGAACCCCGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp CCCAAGAACACGGCAGAAAATGAATCTGCTCTCTCCTaGAGGAGAAACTACCATGGGAGACATTATCTGACT +
Preference number: 3 (lower is better)
Translates to: PKNTAENESALS*RRNYHGRHYLT
Trigger: AGTCAGATAATGTCTCCCATGGTAGTTTCTCCTCCAGGAGAGAGCAGATTCATTTTCTGCCGTGTTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp CACATGGTTGTGATCCAAATCTCACGATATCCTTGCTaGCCTCATAGACAGATGTGTTGTCACTGGAACCCA +
Preference number: 3 (lower is better)
Translates to: HMVVIQISRYPC*PHRQMCCHWNP
Trigger: TGGGTTCCAGTGACAACACATCTGTCTATGAGGTCAGCAAGGATATCGTGAGATTTGGATCACAACCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp ACCCTGCATGCTATGACAAAGCTTGGCCCATGTATTTaGCCCAGTAATACTGAACAGGTCAAATGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: TLHAMTKLGPCI*PSNTEQVKCQE
Trigger: CTCTTGGCATTTGACCTGTTCAGTATTACTGGGTCAAATACATGGGCCAAGCTTTGTCATAGCATGCAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp TTCATGGTCAGTGACCATGCAATTCATGCCCAGTTATaGTATACCATCAGCCTCAGCAAACCAAACAGTCCT +
Preference number: 3 (lower is better)
Translates to: FMVSDHAIHAQL*YTISLSKPNSP
Trigger: AGGACTGTTTGGTTTGCTGAGGCTGATGGTATACCATAACTGGGCATGAATTGCATGGTCACTGACCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp TTCTGTTTAATCTGCATATTTGCAAGGCTGGCATCCTaGGTATGTCAGTCATGTGCCTCATTCTGGAGTCGA +
Preference number: 3 (lower is better)
Translates to: FCLICIFARLAS*VCQSCASFWSR
Trigger: TCGACTCCAGAATGAGGCACATGACTGACATACTCAGGATGCCAGCCTTGCAAATATGCAGATTAAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072868.5
3UTR GCA 72 bp GATGCAAACACCAGTGAGTGTCACTTCACTGAGAGGTaGAAAGGCATGTTATTAGACACACCATCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: DANTSECHFTER*KGMLLDTPSSK
Trigger: TTTTGAGGATGGTGTGTCTAATAACATGCCTTTGCACCTCTCAGTGAAGTGACACTCACTGGTGTTTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp GCACAGACAATTCCACTCACAGGTAATGCTGGGATATaGGCATTAGAATACTGTACACAGTGGACAGAGAAA +
Preference number: 3 (lower is better)
Translates to: AQTIPLTGNAGI*ALEYCTQWTEK
Trigger: TTTCTCTGTCCACTGTGTACAGTATTCTAATGCTCATATCCCAGCATTACCTGTGAGTGGAATTGTCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp CTCCTCTTTTCTTCTTTCCATCAGCTTCATGGTCAGTaGCCATGCAATTCATGCCCAGTTATGGTATACCAT +
Preference number: 3 (lower is better)
Translates to: LLFSSFHQLHGQ*PCNSCPVMVYH
Trigger: ATGGTATACCATAACTGGGCATGAATTGCATGGTCACTGACCATGAAGCTGATGGAAAGAAGAAAAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp CAGGACCAAGTAGAAAGACAACTCGAAGATTTGCATTaGTCAAGTGTGCTTAGCTTTGCGATCTCTCTGTTT +
Preference number: 3 (lower is better)
Translates to: QDQVERQLEDLH*SSVLSFAISLF
Trigger: AAACAGAGAGATCGCAAAGCTAAGCACACTTGACCAATGCAAATCTTCGAGTTGTCTTTCTACTTGGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR TCA 72 bp AAGAAAATATTTAAGCTATTGCCCTTGCCAGCAACCTaGCAGTGCTTACCTCACAAAGACAACAAAACACAA +
Preference number: 3 (lower is better)
Translates to: KKIFKLLPLPAT*QCLPHKDNKTQ
Trigger: TTGTGTTTTGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAAATATTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CCA 72 bp ACACAAAATGGACCAATTAAGAGTAGGCCCAAACTTTaGATTAAAAGCCTGTTTATCTCCGTATTTGGATCC +
Preference number: 3 (lower is better)
Translates to: TQNGPIKSRPKL*IKSLFISVFGS
Trigger: GGATCCAAATACGGAGATAAACAGGCTTTTAATCCAAAGTTTGGGCCTACTCTTAATTGGTCCATTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCCAGCCACAGCTGCCTaGGGAAGTTGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNPATAA*GSCPGV
Trigger: AACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCGCACAGCTCAGCCATaGCGTGAAGCTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNRTAQP*REACRC
Trigger: ACACCGGCAAGCTTCACGTCATGGCTGAGCTGTGCG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCGCTGCCTGCGGAAGTTaGCCAGGGGTTGCCCATCGA +
Preference number: 4 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSAACGS*PGVAHR
Trigger: TCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGC...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCCCAGCCACAGCTGCCTaGGGAAGTTGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSPATAA*GSCPGV
Trigger: AACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGG...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCAACGCCAGCCACAGCTaGCTGCGGAAGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSNASHS*LRKLPR
Trigger: CCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTT...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAATGGCCTCTCGCGAGTaGCAGAGGAGCAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKMASRE*QRSRRP
Trigger: GGGCCGTCTGCTCCTCTGCCACTCGCGAGAGGCCAT...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACACCAGCAGGCAGGGATaGTGGCCAGGCCTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNTSRQG*WPGLRS
Trigger: AGAACGAAGGCCTGGCCACCATCCCTGCCTGCTGGT...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCCCCAGCTGTTGTCCCTaGGACCACATCTCCGTACCC +
Preference number: 4 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSPSCCP*DHISVP
Trigger: GGGTACGGAGATGTGGTCCCAGGGACAACAGCTGGG...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TTTTGCCATGATGCAAACACCAGTGAGTGTCACTTCACTGAGAGGTGCAAAGGCATGGCCTCTCGCGAGTaGCAGAGGAGCAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: FCHDANTSECHFTERCKGMASRE*QRSRRP
Trigger: GGGCCGTCTGCTCCTCTGCCACTCGCGAGAGGCCAT...GCCTTTGCACCTCTCAGTGAAGTGACACTCACTGGTGTTTGCATCATGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAAGCTGTACTTCAGGGTaGCTCCCAAGGAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKSCTSG*LPRSGG
Trigger: GCCTCCGCTCCTTGGGAGCCACCCTGAAGTACAGCT...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCTTTCCTGGTCACTCTaGTCGTCCCATTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNLSWSL*SSHFSC
Trigger: GCAGGAGAAATGGGACGAGCAGAGTGACCAGGAAAG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTGCTGCCTGCGGAAGTTaGCCAGGGGTTGCCCATCGA +
Preference number: 4 (lower is better)
Translates to: HTAASEIGAQTIPLTGNAAACGS*PGVAHR
Trigger: TCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGC...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAAAGCGCAGCAGCGTATaGGAACGCAGCCGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKKRSSV*ERSRLL
Trigger: CAAGAGACGGCTGCGTTCCCATACGCTGCTGCGCTT...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTCTTTCCTGGTCACTCTaGTCGTCCCATTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATLSWSL*SSHFSC
Trigger: GCAGGAGAAATGGGACGAGCAGAGTGACCAGGAAAG...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTAAGTTGCCCAGGGGTTaGCCATCGAACTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATKLPRG*PSNLEA
Trigger: TGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTT...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAGGATGCCTGCCAAGATaGAGGCAGAGGCAGTCAACT +
Preference number: 4 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKGCLPR*RQRQST
Trigger: AGTTGACTGCCTCTGCCTGCATCTTGGCAGGCATCC...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTCACCACCAGGATGCCTaGCAAGATGCAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HTAASEIGAQTIPLTGNAHHQDA*QDAGRG
Trigger: GCCTCTGCCTGCATCTTGGCAGGCATCCTGGTGGTG...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TTTTGCCATGATGCAAACACCAGTGAGTGTCACTTCACTGAGAGGTGCAAAGGCACCAGCAGGCAGGGATaGTGGCCAGGCCTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: FCHDANTSECHFTERCKGTSRQG*WPGLRS
Trigger: AGAACGAAGGCCTGGCCACCATCCCTGCCTGCTGGT...GCCTTTGCACCTCTCAGTGAAGTGACACTCACTGGTGTTTGCATCATGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAACGAAGGAGGAAGTGGTaGTTTCCTGGTCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKRRRKW*FPGHSA
Trigger: AGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCG...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTCACCACCAGGATGCCTaGCAAGATGCAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NLGNAELGWETQPQTNVSHHQDA*QDAGRG
Trigger: GCCTCTGCCTGCATCTTGGCAGGCATCCTGGTGGTG...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGGAAGTGGTGCTTTCCTaGTCACTCTGCTCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHREVVLS*SLCSSH
Trigger: ATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTC...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGCCACAATTTCGAACCTaGGGTCTTCACCGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHRPQFRT*GLHRGY
Trigger: GTAACCCCGGTGAAGACCCCAGGTTCGAAATTGTGG...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTCCCAGCTGTTGTCCCTaGGACCACATCTCCGTACCC +
Preference number: 4 (lower is better)
Translates to: NLGNAELGWETQPQTNVSPSCCP*DHISVP
Trigger: GGGTACGGAGATGTGGTCCCAGGGACAACAGCTGGG...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp AGAGACCACACTGCCTGTGGTCTCTACCGCCGATATCCCAAAGTGCAGAACAAAAGATGGAAAGGACACTaGAGACCCTGCTTAGGACTG +
Preference number: 4 (lower is better)
Translates to: RDHTACGLYRRYPKVQNKRWKGH*RPCLGL
Trigger: CAGTCCTAAGCAGGGTCTTCAGTGTCCTTTCCATCT...TTTGTTCTGCACTTTGGGATATCGGCGGTAGAGACCACAGGCAGTGTGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGAGTGTCTGGCCAGCTTaGGAATTCGGAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHRSVWPA*EFGRSS
Trigger: TGAGGATCTTCCGAATTCTCAAGCTGGCCAGACACT...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATAACGCCAGCCACAGCTaGCTGCGGAAGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHNASHS*LRKLPR
Trigger: CCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTT...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTGGATGCCTGCCAAGATaGAGGCAGAGGCAGTCAACT +
Preference number: 4 (lower is better)
Translates to: HTAASEIGAQTIPLTGNAGCLPR*RQRQST
Trigger: AGTTGACTGCCTCTGCCTGCATCTTGGCAGGCATCC...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGCATCGAAGGAGGAAGTaGTGCTTTCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHRHRRRK*CFPGHS
Trigger: AGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATG...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTAGGGATTTGGAAGTCTaGCAGGCTATTGAGGCACAT +
Preference number: 4 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATRDLEV*QAIEAH
Trigger: ATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCT...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGCCAAGGCAGGAACTCAAGGCAATCAAACACTATACATACACTATCCTGTGTCAGCTGTACTTCAGGGTaGCTCCCAAGGAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CQGRNSRQSNTIHTLSCVSCTSG*LPRSGG
Trigger: GCCTCCGCTCCTTGGGAGCCACCCTGAAGTACAGCT...GACACAGGATAGTGTATGTATAGTGTTTGATTGCCTTGAGTTCCTGCCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATCGCACAGCTCAGCCATaGCGTGAAGCTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: CIYCVPQERIVQATLIIYRTAQP*REACRC
Trigger: ACACCGGCAAGCTTCACGTCATGGCTGAGCTGTGCG...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTATTAGCCTCAGGACTTaGGCCACCCTGCCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: HTAASEIGAQTIPLTGNAISLRT*ATLPKL
Trigger: TAACTTGGGCAGGGTGGCTCAAGTCCTGAGGCTAAT...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTAGTAGTCCCTTAAATTaGCCGAAGGGACCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATSSPLN*PKGPLS
Trigger: TGAAAGAGGTCCCTTCGGTCAATTTAAGGGACTACT...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp TTTTGCCATGATGCAAACACCAGTGAGTGTCACTTCACTGAGAGGTGCAAAGGCCGAAGGAGGAAGTGGTaGTTTCCTGGTCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: FCHDANTSECHFTERCKGRRRKW*FPGHSA
Trigger: AGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCG...GCCTTTGCACCTCTCAGTGAAGTGACACTCACTGGTGTTTGCATCATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGCCAAGGCAGGAACTCAAGGCAATCAAACACTATACATACACTATCCTGTGTCAAGCGCAGCAGCGTATaGGAACGCAGCCGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CQGRNSRQSNTIHTLSCVKRSSV*ERSRLL
Trigger: CAAGAGACGGCTGCGTTCCCATACGCTGCTGCGCTT...GACACAGGATAGTGTATGTATAGTGTTTGATTGCCTTGAGTTCCTGCCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGCCAAGGCAGGAACTCAAGGCAATCAAACACTATACATACACTATCCTGTGTCCGCAGAGTTCCAGAATaGCCTCTCGCGAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CQGRNSRQSNTIHTLSCVRRVPE*PLASGR
Trigger: TCTGCCACTCGCGAGAGGCCATTCTGGAACTCTGCG...GACACAGGATAGTGTATGTATAGTGTTTGATTGCCTTGAGTTCCTGCCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTCCACAATTTCGAACCTaGGGTCTTCACCGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: HTAASEIGAQTIPLTGNAPQFRT*GLHRGY
Trigger: GTAACCCCGGTGAAGACCCCAGGTTCGAAATTGTGG...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGCAAGCAATGCCAAAGTaGTCCACAATTTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHRQAMPK*STISNL
Trigger: CAGGTTCGAAATTGTGGAGCACTTTGGCATTGCTTG...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATAGACCACCACCAGGATaGCTGCCAAGATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CIYCVPQERIVQATLIIYRPPPG*LPRCRQ
Trigger: CTGCCTGCATCTTGGCAGGCATCCTGGTGGTGGTCT...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCATGTTTGTCAGACTTaGCATGAGGGACTTAACTTT +
Preference number: 4 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNHVCQT*HEGLNF
Trigger: AAAGTTAAGTCCCTCATGGCAAGTCTGACAAACATG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTAGATGGAAAGGACACTaGAGACCCTGCTTAGGACTG +
Preference number: 4 (lower is better)
Translates to: NLGNAELGWETQPQTNVSRWKGH*RPCLGL
Trigger: CAGTCCTAAGCAGGGTCTTCAGTGTCCTTTCCATCT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp TTAAGCTATTGCCCTTGCCAGCAACCTGACAGTGCTTACCTCACAAAGACAACAAGTGTCTGGCCAGCTTaGGAATTCGGAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: LSYCPCQQPDSAYLTKTTSVWPA*EFGRSS
Trigger: TGAGGATCTTCCGAATTCTCAAGCTGGCCAGACACT...TGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTGATGGAAATCCCCACTaGGAGGTAGAGCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: NLGNAELGWETQPQTNVSDGNPH*EVEQEQ
Trigger: TTGCTCTTGCTCTACCTCTCAGTGGGGATTTCCATC...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CAGCAAACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTCATGTTTGTCAGACTTaGCATGAGGGACTTAACTTT +
Preference number: 4 (lower is better)
Translates to: QQTKQSSQVRLSPAFSATHVCQT*HEGLNF
Trigger: AAAGTTAAGTCCCTCATGGCAAGTCTGACAAACATG...AGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGCCAAGGCAGGAACTCAAGGCAATCAAACACTATACATACACTATCCTGTGTCTCACCGGGGTTACCCTaGCTATCAGGGATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CQGRNSRQSNTIHTLSCVSPGLP*LSGIWK
Trigger: CTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGA...GACACAGGATAGTGTATGTATAGTGTTTGATTGCCTTGAGTTCCTGCCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR GCA 90 bp CATCTTGAATATGCTCTGCACTACCAGGTTTCCATGCCAAGGCAGGAACTCAAGCAAGCAATGCCAAAGTaGTCCACAATTTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: HLEYALHYQVSMPRQELKQAMPK*STISNL
Trigger: CAGGTTCGAAATTGTGGAGCACTTTGGCATTGCTTG...CTTGAGTTCCTGCCTTGGCATGGAAACCTGGTAGTGCAGAGCATATTCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATGAAGTGGTGCTTTCCTaGTCACTCTGCTCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHEVVLS*SLCSSH
Trigger: ATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTC...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTAGGGATTTGGAAGTCTaGCAGGCTATTGAGGCACAT +
Preference number: 4 (lower is better)
Translates to: NLGNAELGWETQPQTNVSRDLEV*QAIEAH
Trigger: ATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATTCACCGGGGTTACCCTaGCTATCAGGGATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHSPGLP*LSGIWK
Trigger: CTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGA...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATGATGGAAATCCCCACTaGGAGGTAGAGCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: CIYCVPQERIVQATLIIYDGNPH*EVEQEQ
Trigger: TTGCTCTTGCTCTACCTCTCAGTGGGGATTTCCATC...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR TCA 90 bp TTAAGCTATTGCCCTTGCCAGCAACCTGACAGTGCTTACCTCACAAAGACAACAAGTAGTCCCTTAAATTaGCCGAAGGGACCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSYCPCQQPDSAYLTKTTSSPLN*PKGPLS
Trigger: TGAAAGAGGTCCCTTCGGTCAATTTAAGGGACTACT...TGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATCATCGAAGGAGGAAGTaGTGCTTTCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHHRRRK*CFPGHS
Trigger: AGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATG...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CCA 90 bp TGCCAAGGCAGGAACTCAAGGCAATCAAACACTATACATACACTATCCTGTGTCTGGCTATCAGGGATTTaGAAGTCTGGCAGGCTATTG +
Preference number: 4 (lower is better)
Translates to: CQGRNSRQSNTIHTLSCVWLSGI*KSGRLL
Trigger: CAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCA...GACACAGGATAGTGTATGTATAGTGTTTGATTGCCTTGAGTTCCTGCCTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CAA 72 bp CAAGGACAGGACCAAGTAGAAAGACAACTCGAAGATTaGCATTGGTCAAGTGTGCTTAGCTTTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: QGQDQVERQLED*HWSSVLSFAIS
Trigger: AGAGATCGCAAAGCTAAGCACACTTGACCAATGCAAATCTTCGAGTTGTCTTTCTACTTGGTCCTGTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CAA 72 bp CTTGAAAAACATGCTAATACCAAGACACAGCAAACTTaGGTCAAAATGGCCTGGATTGAGCATCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LEKHANTKTQQT*VKMAWIEHLSQ
Trigger: CTGGCTGAGATGCTCAATCCAGGCCATTTTGACCAAAGTTTGCTGTGTCTTGGTATTAGCATGTTTTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
3UTR CAA 72 bp TGTTTAGCTAAAGTCGCTGTCCCTAAATTTAACTGTTaGGAGGAAAAACATTCAGTCTTTACTACATATCGA +
Preference number: 4 (lower is better)
Translates to: CLAKVAVPKFNC*EEKHSVFTTYR
Trigger: TCGATATGTAGTAAAGACTGAATGTTTTTCCTCCAAACAGTTAAATTTAGGGACAGCGACTTTAGCTAAACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp AGGAGCAGACGGCCCAGGCGTGTCTCAGGGAAGCGCAGCAGCGTATaGGAACGCAGCCGTCTCTTGAAGCCACCCACATTGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: RSRRPRRVSGKRSSV*ERSRLLKPPTLMRI
Trigger: GATCCGCATCAATGTGGGTGGCTTCAAGAGACGGCTGCGTTCCCATACGCTGCTGCGCTTCCCTGAGACACGCCTGGGCCGTCTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp AGAACTCACGCTGAACGTCATCGTAGTCATCGCAGAGTTCCAGAATaGCCTCTCGCGAGTGGCAGAGGAGCAGACGGCCCAGGCGTGTCT +
Preference number: 5 (lower is better)
Translates to: RTHAERHRSHRRVPE*PLASGRGADGPGVS
Trigger: AGACACGCCTGGGCCGTCTGCTCCTCTGCCACTCGCGAGAGGCCATTCTGGAACTCTGCGATGACTACGATGACGTTCAGCGTGAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 90 bp TTAGGACTGAGTAGCCTGGGTTGTCCAACGCCAGCCACAGCTGCCTaGGGAAGTTGCCCAGGGGTTGCCCATCGAACTTGGAAGCATCAT +
Preference number: 5 (lower is better)
Translates to: LGLSSLGCPTPATAA*GSCPGVAHRTWKHH
Trigger: ATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTTGGACAACCCAGGCTACTCAGTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp TGGAACCCATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGAGCTGCCTGCGGAAGTaGCCCAGGGGTTGCCCATCG +
Preference number: 5 (lower is better)
Translates to: WNPYSSLGNRSTDNSTHRSCLRK*PRGCPS
Trigger: CGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCT...CCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATGGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 90 bp AGTAGCCTGGGTTGTCCAACGCCAGCCACAGCTGCCTGCGGAAGTTaGCCAGGGGTTGCCCATCGAACTTGGAAGCATCATTATAGAAGG +
Preference number: 5 (lower is better)
Translates to: SSLGCPTPATAACGS*PGVAHRTWKHHYRR
Trigger: CCTTCTATAATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTTGGACAACCCAGGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp GGGGTCTTCACCGGGGTTACCCTGGCTATCAGGGATTTGGAAGTCTaGCAGGCTATTGAGGCACATGGTGATGATGGAGCCCAACACCAC +
Preference number: 5 (lower is better)
Translates to: GVFTGVTLAIRDLEV*QAIEAHGDDGAQHH
Trigger: GTGGTGTTGGGCTCCATCATCACCATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp TCGAACCTGGGGTCTTCACCGGGGTTACCCTGGCTATCAGGGATTTaGAAGTCTGGCAGGCTATTGAGGCACATGGTGATGATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SNLGSSPGLPWLSGI*KSGRLLRHMVMMEP
Trigger: GGGCTCCATCATCACCATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCCAGGTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp TGCCAAGATGCAGGCAGAGGCAGTCAACTTCCCAGCTGTTGTCCCTaGGACCACATCTCCGTACCCAACTGTGGTCATACTGACAGTGGC +
Preference number: 5 (lower is better)
Translates to: CQDAGRGSQLPSCCP*DHISVPNCGHTDSG
Trigger: GCCACTGTCAGTATGACCACAGTTGGGTACGGAGATGTGGTCCCAGGGACAACAGCTGGGAAGTTGACTGCCTCTGCCTGCATCTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACGAAGTTGCCCAGGGGTaGCCCATCGAACTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNEVAQG*PIELGS
Trigger: GCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTC...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp GCCACAGCTGCCTGCGGAAGTTGCCCAGGGGTTGCCCATCGAACTTaGAAGCATCATTATAGAAGGCCAAGATCTCATCGAAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ATAACGSCPGVAHRT*KHHYRRPRSHRRRK
Trigger: CTTCCTCCTTCGATGAGATCTTGGCCTTCTATAATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp TTAAGCTATTGCCCTTGCCAGCAACCTGACAGTGCTTACCTCACAAAGACAACAAGCTGCCTGCGGAAGTaGCCCAGGGGTTGCCCATCG +
Preference number: 5 (lower is better)
Translates to: LSYCPCQQPDSAYLTKTTSCLRK*PRGCPS
Trigger: CGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCT...TGTTGTCTTTGTGAGGTAAGCACTGTCAGGTTGCTGGCAAGGGCAATAGCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCTCAACTTCCCAGCTGTaGTCCCTGGGACCACATCTC +
Preference number: 5 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSSTSQL*SLGPHL
Trigger: GAGATGTGGTCCCAGGGACAACAGCTGGGAAGTTGA...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 90 bp GCAAACCTGGCCACCAACTCAAATGTGAACCAAGCAATGCCAAAGTaGTCCACAATTTCGAACCTGGGGTCTTCACCGGGGTTACCCTGG +
Preference number: 5 (lower is better)
Translates to: ANLATNSNVNQAMPK*STISNLGSSPGLPW
Trigger: CCAGGGTAACCCCGGTGAAGACCCCAGGTTCGAAATTGTGGAGCACTTTGGCATTGCTTGGTTCACATTTGAGTTGGTGGCCAGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp AAGTGCTCCACAATTTCGAACCTGGGGTCTTCACCGGGGTTACCCTaGCTATCAGGGATTTGGAAGTCTGGCAGGCTATTGAGGCACATG +
Preference number: 5 (lower is better)
Translates to: KCSTISNLGSSPGLP*LSGIWKSGRLLRHM
Trigger: CATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCCAGGTTCGAAATTGTGGAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCTGGCTATCAGGGATTaGGAAGTCTGGCAGGCTATT +
Preference number: 5 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNLAIRD*EVWQAI
Trigger: AATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ACCAAACAGTCCTCACAGGTTAGGCTGTCCCCTGCCTTCAGTGCAACTGGGAACCATAGCACTCTCAAGTaGCTTTTGGCGCCGATAGAA +
Preference number: 5 (lower is better)
Translates to: TKQSSQVRLSPAFSATGNHSTLK*LLAPIE
Trigger: TTCTATCGGCGCCAAAAGCAACTTGAGAGTGCTATG...GTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp TTACTACCTGATGAGCTAGGCATAGGCTCAGCATTCTACACGCCCCTCCTCAGCCATAGCACTCTCAAGTaGCTTTTGGCGCCGATAGAA +
Preference number: 5 (lower is better)
Translates to: LLPDELGIGSAFYTPLLSHSTLK*LLAPIE
Trigger: TTCTATCGGCGCCAAAAGCAACTTGAGAGTGCTATG...GCTGAGGAGGGGCGTGTAGAATGCTGAGCCTATGCCTAGCTCATCAGGTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 90 bp TGGAAGCATCATTATAGAAGGCCAAGATCTCATCGAAGGAGGAAGTaGTGCTTTCCTGGTCACTCTGCTCGTCCCATTTCTCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: WKHHYRRPRSHRRRK*CFPGHSARPISPAQ
Trigger: CTGAGCAGGAGAAATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATGAGATCTTGGCCTTCTATAATGATGCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp CATACAGCAGCCTCGGAAATAGGAGCACAGACAATTCCACTCACAGGTAATGCTTTGAAGCCACCCACATaGATGCGGATCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: HTAASEIGAQTIPLTGNALKPPT*MRISPS
Trigger: GGATGGAGAGATCCGCATCAATGTGGGTGGCTTCAA...AGCATTACCTGTGAGTGGAATTGTCTGTGCTCCTATTTCCGAGGCTGCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 90 bp AAGCATCATTATAGAAGGCCAAGATCTCATCGAAGGAGGAAGTGGTaGTTTCCTGGTCACTCTGCTCGTCCCATTTCTCCTGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: KHHYRRPRSHRRRKW*FPGHSARPISPAQV
Trigger: AACCTGAGCAGGAGAAATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATGAGATCTTGGCCTTCTATAATGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTTTGAAGCCACCCACATaGATGCGGATCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: NLGNAELGWETQPQTNVSLKPPT*MRISPS
Trigger: GGATGGAGAGATCCGCATCAATGTGGGTGGCTTCAA...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATGAAGTTGCCCAGGGGTaGCCCATCGAACTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHEVAQG*PIELGS
Trigger: GCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTC...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTGAGTGTCTGGCCAGCTaGAGAATTCGGAAGATCCTC +
Preference number: 5 (lower is better)
Translates to: NLGNAELGWETQPQTNVSECLAS*RIRKIL
Trigger: GAGGATCTTCCGAATTCTCAAGCTGGCCAGACACTC...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATGAACGCAGCCGTCTCTaGAAGCCACCCACATTGATG +
Preference number: 5 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHERSRL*KPPTLM
Trigger: CATCAATGTGGGTGGCTTCAAGAGACGGCTGCGTTC...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp AACCTGGGAAATGCAGAACTTGGATGGGAAACACAGCCCCAGACTAATGTATCTAAGTCTGGCAGGCTATaGAGGCACATGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: NLGNAELGWETQPQTNVSKSGRL*RHMVMM
Trigger: CATCATCACCATGTGCCTCAATAGCCTGCCAGACTT...AGATACATTAGTCTGGGGCTGTGTTTCCCATCCAAGTTCTGCATTTCCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATTCAACTTCCCAGCTGTaGTCCCTGGGACCACATCTC +
Preference number: 5 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHSTSQL*SLGPHL
Trigger: GAGATGTGGTCCCAGGGACAACAGCTGGGAAGTTGA...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATGAGTGTCTGGCCAGCTaGAGAATTCGGAAGATCCTC +
Preference number: 5 (lower is better)
Translates to: CIYCVPQERIVQATLIIYECLAS*RIRKIL
Trigger: GAGGATCTTCCGAATTCTCAAGCTGGCCAGACACTC...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATAAGTCTGGCAGGCTATaGAGGCACATGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHKSGRL*RHMVMM
Trigger: CATCATCACCATGTGCCTCAATAGCCTGCCAGACTT...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp ATACATCCTTGGTCTTCTAGTGCTGAAGATACCAGCCAACAACAAGAGTTCCATACTCTCAAGTTGCTTTaGGCGCCGATAGAAATGGGA +
Preference number: 5 (lower is better)
Translates to: IHPWSSSAEDTSQQQEFHTLKLL*APIEMG
Trigger: TCCCATTTCTATCGGCGCCAAAAGCAACTTGAGAGT...ATGGAACTCTTGTTGTTGGCTGGTATCTTCAGCACTAGAAGACCAAGGATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS-3UTR CAA 90 bp TGCATCTACTGTGTTCCCCAAGAAAGGATTGTACAGGCTACCTTGATCATCTATACTCTCAAGTTGCTTTaGGCGCCGATAGAAATGGGA +
Preference number: 5 (lower is better)
Translates to: CIYCVPQERIVQATLIIYTLKLL*APIEMG
Trigger: TCCCATTTCTATCGGCGCCAAAAGCAACTTGAGAGT...ATAGATGATCAAGGTAGCCTGTACAATCCTTTCTTGGGGAACACAGTAGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp CGGCCCAGGCGTGTCTCAGGGAAGCGCAGCAGCGTATaGGAACGCAGCCGTCTCTTGAAGCCACCCACATTG +
Preference number: 6 (lower is better)
Translates to: RPRRVSGKRSSV*ERSRLLKPPTL
Trigger: CAATGTGGGTGGCTTCAAGAGACGGCTGCGTTCCCATACGCTGCTGCGCTTCCCTGAGACACGCCTGGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 72 bp AGTAGCCTGGGTTGTCCAACGCCAGCCACAGCTGCCTaGGGAAGTTGCCCAGGGGTTGCCCATCGAACTTGG +
Preference number: 6 (lower is better)
Translates to: SSLGCPTPATAA*GSCPGVAHRTW
Trigger: CCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTTGGACAACCCAGGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 72 bp GGGTTGTCCAACGCCAGCCACAGCTGCCTGCGGAAGTaGCCCAGGGGTTGCCCATCGAACTTGGAAGCATCA +
Preference number: 6 (lower is better)
Translates to: GLSNASHSCLRK*PRGCPSNLEAS
Trigger: TGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTTGGACAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 90 bp CGTGTCTCAGGGAAGCGCAGCAGCGTATGGGAACGCAGCCGTCTCTaGAAGCCACCCACATTGATGCGGATCTCTCCATCCTCGACGTCG +
Preference number: 6 (lower is better)
Translates to: RVSGKRSSVWERSRL*KPPTLMRISPSSTS
Trigger: CGACGTCGAGGATGGAGAGATCCGCATCAATGTGGGTGGCTTCAAGAGACGGCTGCGTTCCCATACGCTGCTGCGCTTCCCTGAGACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 72 bp GGTTGTCCAACGCCAGCCACAGCTGCCTGCGGAAGTTaGCCAGGGGTTGCCCATCGAACTTGGAAGCATCAT +
Preference number: 6 (lower is better)
Translates to: GCPTPATAACGS*PGVAHRTWKHH
Trigger: ATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTTGGACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp GCTGAACGTCATCGTAGTCATCGCAGAGTTCCAGAATaGCCTCTCGCGAGTGGCAGAGGAGCAGACGGCCCA +
Preference number: 6 (lower is better)
Translates to: AERHRSHRRVPE*PLASGRGADGP
Trigger: TGGGCCGTCTGCTCCTCTGCCACTCGCGAGAGGCCATTCTGGAACTCTGCGATGACTACGATGACGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp AGAGCAACCCCACTTCCTTGTAGCTGTACTTCAGGGTaGCTCCCAAGGAGCGGAGGCCAGTGGAGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: RATPLPCSCTSG*LPRSGGQWSVW
Trigger: CCAGACACTCCACTGGCCTCCGCTCCTTGGGAGCCACCCTGAAGTACAGCTACAAGGAAGTGGGGTTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 72 bp GGGAAGCGCAGCAGCGTATGGGAACGCAGCCGTCTCTaGAAGCCACCCACATTGATGCGGATCTCTCCATCC +
Preference number: 6 (lower is better)
Translates to: GKRSSVWERSRL*KPPTLMRISPS
Trigger: GGATGGAGAGATCCGCATCAATGTGGGTGGCTTCAAGAGACGGCTGCGTTCCCATACGCTGCTGCGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 90 bp CGCAGCAGCGTATGGGAACGCAGCCGTCTCTTGAAGCCACCCACATaGATGCGGATCTCTCCATCCTCGACGTCGGTATCGGACACATCC +
Preference number: 6 (lower is better)
Translates to: RSSVWERSRLLKPPT*MRISPSSTSVSDTS
Trigger: GGATGTGTCCGATACCGACGTCGAGGATGGAGAGATCCGCATCAATGTGGGTGGCTTCAAGAGACGGCTGCGTTCCCATACGCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 72 bp CGCCAGCCACAGCTGCCTGCGGAAGTTGCCCAGGGGTaGCCCATCGAACTTGGAAGCATCATTATAGAAGGC +
Preference number: 6 (lower is better)
Translates to: RQPQLPAEVAQG*PIELGSIIIEG
Trigger: GCCTTCTATAATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 72 bp GTATGGGAACGCAGCCGTCTCTTGAAGCCACCCACATaGATGCGGATCTCTCCATCCTCGACGTCGGTATCG +
Preference number: 6 (lower is better)
Translates to: VWERSRLLKPPT*MRISPSSTSVS
Trigger: CGATACCGACGTCGAGGATGGAGAGATCCGCATCAATGTGGGTGGCTTCAAGAGACGGCTGCGTTCCCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 90 bp GTTGTCCAACGCCAGCCACAGCTGCCTGCGGAAGTTGCCCAGGGGTaGCCCATCGAACTTGGAAGCATCATTATAGAAGGCCAAGATCTC +
Preference number: 6 (lower is better)
Translates to: VVQRQPQLPAEVAQG*PIELGSIIIEGQDL
Trigger: GAGATCTTGGCCTTCTATAATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGCAGCTGTGGCTGGCGTTGGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 90 bp TTCGAACCTGGGGTCTTCACCGGGGTTACCCTGGCTATCAGGGATTaGGAAGTCTGGCAGGCTATTGAGGCACATGGTGATGATGGAGCC +
Preference number: 6 (lower is better)
Translates to: FEPGVFTGVTLAIRD*EVWQAIEAHGDDGA
Trigger: GGCTCCATCATCACCATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCCAGGTTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp GGGTCTTCACCGGGGTTACCCTGGCTATCAGGGATTTaGAAGTCTGGCAGGCTATTGAGGCACATGGTGATG +
Preference number: 6 (lower is better)
Translates to: GSSPGLPWLSGI*KSGRLLRHMVM
Trigger: CATCACCATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 72 bp GGGGTCTTCACCGGGGTTACCCTGGCTATCAGGGATTaGGAAGTCTGGCAGGCTATTGAGGCACATGGTGAT +
Preference number: 6 (lower is better)
Translates to: GVFTGVTLAIRD*EVWQAIEAHGD
Trigger: ATCACCATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 90 bp CCGGGGTTACCCTGGCTATCAGGGATTTGGAAGTCTGGCAGGCTATaGAGGCACATGGTGATGATGGAGCCCAACACCACCAAGATGGAA +
Preference number: 6 (lower is better)
Translates to: PGLPWLSGIWKSGRL*RHMVMMEPNTTKME
Trigger: TTCCATCTTGGTGGTGTTGGGCTCCATCATCACCATGTGCCTCAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 72 bp TCTGCTCGTCCCATTTCTCCTGCTCAGGTTCCACTTTaGGGCCGTGATAGCTATAGCTGCAGCAAGAGTCGA +
Preference number: 6 (lower is better)
Translates to: SARPISPAQVPL*GRDSYSCSKSR
Trigger: TCGACTCTTGCTGCAGCTATAGCTATCACGGCCGCAAAGTGGAACCTGAGCAGGAGAAATGGGACGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp GCCAAGATCTCATCGAAGGAGGAAGTGGTGCTTTCCTaGTCACTCTGCTCGTCCCATTTCTCCTGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: AKISSKEEVVLS*SLCSSHFSCSG
Trigger: ACCTGAGCAGGAGAAATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATGAGATCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp ACCAAGCAATGCCAAAGTGCTCCACAATTTCGAACCTaGGGTCTTCACCGGGGTTACCCTGGCTATCAGGGA +
Preference number: 6 (lower is better)
Translates to: TKQCQSAPQFRT*GLHRGYPGYQG
Trigger: TCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCCAGGTTCGAAATTGTGGAGCACTTTGGCATTGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS TCA 72 bp GGTGTAGGCCACCACAGAGAAGATGGAAATCCCCACTaGGAGGTAGAGCAAGAGCAACCCCACTTCCTTGTA +
Preference number: 6 (lower is better)
Translates to: GVGHHREDGNPH*EVEQEQPHFLV
Trigger: TACAAGGAAGTGGGGTTGCTCTTGCTCTACCTCTCAGTGGGGATTTCCATCTTCTCTGTGGTGGCCTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 72 bp TCATCGAAGGAGGAAGTGGTGCTTTCCTGGTCACTCTaGTCGTCCCATTTCTCCTGCTCAGGTTCCACTTTG +
Preference number: 6 (lower is better)
Translates to: SSKEEVVLSWSL*SSHFSCSGSTL
Trigger: CAAAGTGGAACCTGAGCAGGAGAAATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS GCA 72 bp GCCACCAACTCAAATGTGAACCAAGCAATGCCAAAGTaGTCCACAATTTCGAACCTGGGGTCTTCACCGGGG +
Preference number: 6 (lower is better)
Translates to: ATNSNVNQAMPK*STISNLGSSPG
Trigger: CCCCGGTGAAGACCCCAGGTTCGAAATTGTGGAGCACTTTGGCATTGCTTGGTTCACATTTGAGTTGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp GCCTGCGGAAGTTGCCCAGGGGTTGCCCATCGAACTTaGAAGCATCATTATAGAAGGCCAAGATCTCATCGA +
Preference number: 6 (lower is better)
Translates to: ACGSCPGVAHRT*KHHYRRPRSHR
Trigger: TCGATGAGATCTTGGCCTTCTATAATGATGCTTCCAAGTTCGATGGGCAACCCCTGGGCAACTTCCGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp ACAATTTCGAACCTGGGGTCTTCACCGGGGTTACCCTaGCTATCAGGGATTTGGAAGTCTGGCAGGCTATTG +
Preference number: 6 (lower is better)
Translates to: TISNLGSSPGLP*LSGIWKSGRLL
Trigger: CAATAGCCTGCCAGACTTCCAAATCCCTGATAGCCAGGGTAACCCCGGTGAAGACCCCAGGTTCGAAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CCA 72 bp CATTATAGAAGGCCAAGATCTCATCGAAGGAGGAAGTaGTGCTTTCCTGGTCACTCTGCTCGTCCCATTTCT +
Preference number: 6 (lower is better)
Translates to: HYRRPRSHRRRK*CFPGHSARPIS
Trigger: AGAAATGGGACGAGCAGAGTGACCAGGAAAGCACCACTTCCTCCTTCGATGAGATCTTGGCCTTCTATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2
CDS CAA 72 bp ACAATGGACATGAGATCAATAAGGTTTAGAGCATTCTaGAAGAACTTAAGAAAGTCAGGGGCCACAGCAAAC +
Preference number: 6 (lower is better)
Translates to: TMDMRSIRFRAF*KNLRKSGATAN
Trigger: GTTTGCTGTGGCCCCTGACTTTCTTAAGTTCTTCAAGAATGCTCTAAACCTTATTGATCTCATGTCCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072868.5
ENSMUST00000228725.2