Pregenerated sensors for KCNS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040164Ensembl transcript IDs: ENSMUST00000045196.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGAGAGGGAGTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTaGATCATTAATCAAGCTAATGTCTCACCGGGCTTGCCTGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: REGVVLPTVGWALPY*IINQANVSPGLPAS Trigger: GCTTGCAGGCAAGCCCGGTGAGACATTAGCTTGATTAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR TCA 90 bp | TGCAAGCAGGAACTGAAGCAGAGGCCATGGAGGAACACTGCTTACTaGCTCGCTCCCGTGGCCAGTTCAGTCTACTTTCTTATATACCCG | + |
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Preference number: 1 (lower is better) Translates to: CKQELKQRPWRNTAY*LAPVASSVYFLIYP Trigger: CGGGTATATAAGAAAGTAGACTGAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTCAGTTCCTGCTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR CCA 90 bp | TCCCGTGGCCAGTTCAGTCTACTTTCTTATATACCCGAGAGGGAGTaGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTGAATCATTA | + |
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Preference number: 1 (lower is better) Translates to: SRGQFSLLSYIPERE*YCPQWAGPSHIESL Trigger: TAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCGGGTATATAAGAAAGTAGACTGAACTGGCCACGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR CCA 90 bp | AGTCTACTTTCTTATATACCCGAGAGGGAGTGGTACTGCCCACAGTaGGCTGGGCCCTCCCATATTGAATCATTAATCAAGCTAATGTCT | + |
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Preference number: 1 (lower is better) Translates to: SLLSYIPEREWYCPQ*AGPSHIESLIKLMS Trigger: AGACATTAGCTTGATTAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCGGGTATATAAGAAAGTAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCTGCCTGCAAGCAATCTaGTGGAGATGTCCCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: EAEAMEEHCLLTRSRGQFCLQAI*WRCPLS Trigger: ACTGAGGGGACATCTCCATCAGATTGCTTGCAGGCA...GAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGATGAGCTGGGCCTTCTCAGTAACCTCCTCTCTGGGTCACATGCTGTGCTGCTCTGTGTTAGCTaGTTCCCAGGCTGTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FRDELGLLSNLLSGSHAVLLCVS*FPGCGE Trigger: CTCCCCACAGCCTGGGAATCAGCTAACACAGAGCAG...CACAGCATGTGACCCAGAGAGGAGGTTACTGAGAAGGCCCAGCTCATCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCCCAGAAGGGTCTATTCAGGCTTTCTCTGTAAGTCATCCCTAGGAAGTGACGGCTCAGGTGGATaGCGCCCATGCAGACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LGPRRVYSGFLCKSSLGSDGSGG*RPCRPQ Trigger: TTGGGGTCTGCATGGGCGCCATCCACCTGAGCCGTC...ACTTCCTAGGGATGACTTACAGAGAAAGCCTGAATAGACCCTTCTGGGACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCCCAGAAGGGTCTATTCAGGCTTTCTCTGTAAGTCATCCCTAGGAAGTCTGATTCCCAGGCTGTaGGGAGGGAACACAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LGPRRVYSGFLCKSSLGSLIPRL*GGNTEP Trigger: GGGCTCTGTGTTCCCTCCCCACAGCCTGGGAATCAG...ACTTCCTAGGGATGACTTACAGAGAAAGCCTGAATAGACCCTTCTGGGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATCTGATGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCCCAGGTAACTTTCTAAAAAGGCTCCTATaGAGGCCGCCCTCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SNLMEMSPQWRLLLPGNFLKRLL*RPPSSS Trigger: GGAGGAAGAGGGCGGCCTCCATAGGAGCCTTTTTAG...AAAGTTACCTGGGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR GCA 90 bp | GAAGCAGAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCATGGGGATAATCATCTaGCAGGCTAAAAAGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EAEAMEEHCLLTRSRGQFMGIII*QAKKAP Trigger: AGGAGCCTTTTTAGCCTGGCAGATGATTATCCCCAT...GAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCTTACATATCCCAGGTCATAGTTCACTGAGGGATGCCAAGGCAGGAGCAAGCAGGGGAGGACTCTaGTCTGTGTTAGCTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: FGLHIPGHSSLRDAKAGASRGGL*SVLADS Trigger: GGAATCAGCTAACACAGAGCAGAGTCCTCCCCTGCT...TGCTCCTGCCTTGGCATCCCTCAGTGAACTATGACCTGGGATATGTAAGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCCTCATCTGTGAAATGGGGATAATCATCTGCCAGGCTAAAAAGGCTCCTAGGGCTGTGCTATCCTaGCTGAGCTTTTCAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SALICEMGIIICQAKKAPRAVLS*LSFSRK Trigger: CTTTCTTGAAAAGCTCAGGCAGGATAGCACAGCCCT...AGGAGCCTTTTTAGCCTGGCAGATGATTATCCCCATTTCACAGATGAGGGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR CCA 90 bp | CATATTGAATCATTAATCAAGCTAATGTCTCACCGGGCTTGCCTGCAAGCAATCTTAGTGATTTCTCTGTaGCATTCAGCTGGGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HIESLIKLMSHRACLQAILVISL*HSAGPQ Trigger: CTGAGGCCCAGCTGAATGCCACAGAGAAATCACTAA...GATTGCTTGCAGGCAAGCCCGGTGAGACATTAGCTTGATTAATGATTCAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCAGTCTATTCTGGGGACAGGCCTaGGCCACCTTTCCTGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: EAMEEHCLLTRSRGQFSLFWGQA*ATFPVA Trigger: TGCCACAGGAAAGGTGGCCAAGGCCTGTCCCCAGAA...TAGACTGAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR TCA 72 bp | AAGCTAATGTCTCACCGGGCTTGCCTGCAAGCAATCTaGTGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: KLMSHRACLQAI*WRCPLSGGSSS Trigger: GGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCTTGCAGGCAAGCCCGGTGAGACATTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR GCA 72 bp | CTTGTGTCAGGTCAGGTGCATGCAACTGCACCCCTCTaGCACCAACAGTTCAGAGATGAGCTGGGCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LVSGQVHATAPL*HQQFRDELGLL Trigger: GAGAAGGCCCAGCTCATCTCTGAACTGTTGGTGGCAGAGGGGTGCAGTTGCATGCACCTGACCTGACACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR CCA 72 bp | CTGCACCCCTCTGCCACCAACAGTTCAGAGATGAGCTaGGCCTTCTCAGTAACCTCCTCTCTGGGTCACATG | + |
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Preference number: 3 (lower is better) Translates to: LHPSATNSSEMS*AFSVTSSLGHM Trigger: CATGTGACCCAGAGAGGAGGTTACTGAGAAGGCCCAGCTCATCTCTGAACTGTTGGTGGCAGAGGGGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR GCA 72 bp | CAAGCAGGAACTGAAGCAGAGGCCATGGAGGAACACTaGTTACTGACTCGCTCCCGTGGCCAGTTCAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: QAGTEAEAMEEH*LLTRSRGQFSL Trigger: TAGACTGAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTCAGTTCCTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR TCA 72 bp | GTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTaGATCATTAATCAAGCTAATGTCTCACCGGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VVLPTVGWALPY*IINQANVSPGL Trigger: CAAGCCCGGTGAGACATTAGCTTGATTAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR TCA 72 bp | GAACTGAAGCAGAGGCCATGGAGGAACACTGCTTACTaGCTCGCTCCCGTGGCCAGTTCAGTCTACTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ELKQRPWRNTAY*LAPVASSVYFL Trigger: AAGAAAGTAGACTGAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR GCA 72 bp | TCCCAGGTAACTTTAGCTTGTGTCAGGTCAGGTGCATaGAACTGCACCCCTCTGCCACCAACAGTTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SQVTLACVRSGA*NCTPLPPTVQR Trigger: TCTCTGAACTGTTGGTGGCAGAGGGGTGCAGTTGCATGCACCTGACCTGACACAAGCTAAAGTTACCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR CCA 72 bp | CAGTTCAGTCTACTTTCTTATATACCCGAGAGGGAGTaGTACTGCCCACAGTGGGCTGGGCCCTCCCATATT | + |
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Preference number: 3 (lower is better) Translates to: QFSLLSYIPERE*YCPQWAGPSHI Trigger: AATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCGGGTATATAAGAAAGTAGACTGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR GCA 72 bp | AGTCTACTTTCTTATATACCCGAGAGGGAGTGGTACTaGCCACAGTGGGCTGGGCCCTCCCATATTGAATCA | + |
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Preference number: 3 (lower is better) Translates to: SLLSYIPEREWY*PQWAGPSHIES Trigger: TGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCGGGTATATAAGAAAGTAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| 3UTR CCA 72 bp | TCTTATATACCCGAGAGGGAGTGGTACTGCCCACAGTaGGCTGGGCCCTCCCATATTGAATCATTAATCAAG | + |
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Preference number: 3 (lower is better) Translates to: SYIPEREWYCPQ*AGPSHIESLIK Trigger: CTTGATTAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCGGGTATATAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAGTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTGAATCATTAGCGCGCGGCAGCACGTaGCCAGCGCGTTCTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EREWYCPQWAGPSHIESLARGST*PARSRP Trigger: TGGGCGAGAACGCGCTGGCCACGTGCTGCCGCGCGC...TAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCAGTCTACGCAGCCCCGTGGAGTaGCGCGCCAGCTTGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: EAMEEHCLLTRSRGQFSLRSPVE*RASLST Trigger: CGTGCTCAAGCTGGCGCGCCACTCCACGGGGCTGCG...TAGACTGAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | AGCAATCTGATGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCCCAGGTAACTTTGTCGCGCACCTCCTCTaGGCTGCGACCCGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SNLMEMSPQWRLLLPGNFVAHLL*AATRGH Trigger: GTGGCCGCGGGTCGCAGCGCAGAGGAGGTGCGCGAC...AAAGTTACCTGGGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAGTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTGAATCATTACCGCTGGCTCCGCGCTaGTCACCAAGCGCTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: EREWYCPQWAGPSHIESLPLAPR*SPSAAP Trigger: TGGCGCAGCGCTTGGTGACCAGCGCGGAGCCAGCGG...TAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR TCA 90 bp | CCGAGAGGGAGTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTGAATCATCGCCAGCCAGCAGTGTaGGATAGAAGGGCAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: PRGSGTAHSGLGPPILNHRQPAV*DRRAAP Trigger: CGGTGCTGCCCTTCTATCTCACACTGCTGGCTGGCG...ATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR TCA 90 bp | CAGGCCTTGGCCACCTTTCCTGTGGCAGGTCTAGAGCTGGGTCTGGGTCCCAGACGCGGAAGATGCGCATaGGGCGGAACACTTGCACTA | + |
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Preference number: 4 (lower is better) Translates to: QALATFPVAGLELGLGPRRGRCA*GGTLAL Trigger: TAGTGCAAGTGTTCCGCCTCATGCGCATCTTCCGCG...TCTGGGACCCAGACCCAGCTCTAGACCTGCCACAGGAAAGGTGGCCAAGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | AGCAATCTGATGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCCCAGGTAACTTTCGCGCCAGCTCCCGCTaGACGTCCGAGATCTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: SNLMEMSPQWRLLLPGNFRASSR*TSEISS Trigger: CGACGAGATCTCGGACGTGCAGCGGGAGCTGGCGCG...AAAGTTACCTGGGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | GAAGCAGAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCGGTGGCAGAAGAAGTTaGGCGTGCTGGGAGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAEAMEEHCLLTRSRGQFGGRRS*ACWEPA Trigger: TGCTGGCTCCCAGCACGCGCAACTTCTTCTGCCACC...GAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | CAGGCCTTGGCCACCTTTCCTGTGGCAGGTCTAGAGCTGGGTCTGGGTCCCAGAATGAGGCGGAACACTTaGACTACCTTGCCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QALATFPVAGLELGLGPRMRRNT*TTLPRS Trigger: GGACCTGGGCAAGGTAGTGCAAGTGTTCCGCCTCAT...TCTGGGACCCAGACCCAGCTCTAGACCTGCCACAGGAAAGGTGGCCAAGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | GATGAGCTGGGCCTTCTCAGTAACCTCCTCTCTGGGTCACATGCTGTGACGGATCCGAGGCCGCCAGCTTaGCACCCACAGTCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: DELGLLSNLLSGSHAVTDPRPPA*HPQSLA Trigger: TGCCAGAGACTGTGGGTGGCAAGCTGGCGGCCTCGG...ATCCGTCACAGCATGTGACCCAGAGAGGAGGTTACTGAGAAGGCCCAGCTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCGCCACCCACAGTCTCTaGCACCACATCCCCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: EAEAMEEHCLLTRSRGQFATHSL*HHIPIA Trigger: GGCTATGGGGATGTGGTGCCAGAGACTGTGGGTGGC...GAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | GAGAGGGAGTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTGAATCATTACCGGCAGGCTGTGGATaGACATGGCAGCGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EREWYCPQWAGPSHIESLPAGCG*TWQRWR Trigger: CCTCCATCGCTGCCATGTGCATCCACAGCCTGCCGG...TAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCAGTCTAGGCTGTGGATGCACATaGCAGCGATGGAGGCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAMEEHCLLTRSRGQFSLGCGCT*QRWRRA Trigger: TGCTCGCCTCCATCGCTGCCATGTGCATCCACAGCC...TAGACTGAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | AGGGCTGTGCTATCCTGCCTGAGCTTTTCAAGAAAGATCTGTGGCCCCTATGTCAGAAGTTGCGCGTGCTaGGAGCCAGCAGCAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RAVLSCLSFSRKICGPYVRSCAC*EPAAGA Trigger: CGCGCCTGCTGCTGGCTCCCAGCACGCGCAACTTCT...GACATAGGGGCCACAGATCTTTCTTGAAAAGCTCAGGCAGGATAGCACAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR TCA 90 bp | TTCAGAGATGAGCTGGGCCTTCTCAGTAACCTCCTCTCTGGGTCACATGCTGTGCTGGATTCTCCATGGTaGGCCAGAGACGACGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FRDELGLLSNLLSGSHAVLDSPW*ARDDGA Trigger: TGCGCCGTCGTCTCTGGCTCACCATGGAGAATCCAG...CACAGCATGTGACCCAGAGAGGAGGTTACTGAGAAGGCCCAGCTCATCTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAGTGGTACTGCCCACAGTGGGCTGGGCCCTCCCATATTGAATCATTAGGGCAGCGAGTAGCCTaGATTCTCCATGGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: EREWYCPQWAGPSHIESLGQRVA*ILHGEP Trigger: TGGCTCACCATGGAGAATCCAGGCTACTCGCTGCCC...TAATGATTCAATATGGGAGGGCCCAGCCCACTGTGGGCAGTACCACTCCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | AGGGCTGTGCTATCCTGCCTGAGCTTTTCAAGAAAGATCTGTGGCCCCTATGTCTGCACATGGCAGCGATaGAGGCGAGCACCACGCCGA | + |
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Preference number: 4 (lower is better) Translates to: RAVLSCLSFSRKICGPYVCTWQR*RRAPRR Trigger: TCGGCGTGGTGCTCGCCTCCATCGCTGCCATGTGCA...GACATAGGGGCCACAGATCTTTCTTGAAAAGCTCAGGCAGGATAGCACAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | AGTGCCCTCATCTGTGAAATGGGGATAATCATCTGCCAGGCTAAAAAGGCTCCTCACGGCCGCCTCCAGTaGCTTCTGGCGCCGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: SALICEMGIIICQAKKAPHGRLQ*LLAPVE Trigger: TTCTACCGGCGCCAGAAGGCACTGGAGGCGGCCGTG...AGGAGCCTTTTTAGCCTGGCAGATGATTATCCCCATTTCACAGATGAGGGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | GATGAGCTGGGCCTTCTCAGTAACCTCCTCTCTGGGTCACATGCTGTGACGGATATGAGGTTGAGCGGGTaGCAGAAGAAGTTGCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: DELGLLSNLLSGSHAVTDMRLSG*QKKLRV Trigger: CACGCGCAACTTCTTCTGCCACCCGCTCAACCTCAT...ATCCGTCACAGCATGTGACCCAGAGAGGAGGTTACTGAGAAGGCCCAGCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | TTTGGCTTACATATCCCAGGTCATAGTTCACTGAGGGATGCCAAGGCAGGAGCAGGCTCCCGGGGAGCTTaGGTCTCCAGGTCTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: FGLHIPGHSSLRDAKAGAGSRGA*VSRSVE Trigger: CTCTACAGACCTGGAGACCCAAGCTCCCCGGGAGCC...TGCTCCTGCCTTGGCATCCCTCAGTGAACTATGACCTGGGATATGTAAGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | CATATTGAATCATTAATCAAGCTAATGTCTCACCGGGCTTGCCTGCAAGCAATCGACACGGGTCCACGCTaGTCGGCGCGTCGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HIESLIKLMSHRACLQAIDTGPR*SARRCP Trigger: AGGACAGCGACGCGCCGAGCAGCGTGGACCCGTGTC...GATTGCTTGCAGGCAAGCCCGGTGAGACATTAGCTTGATTAATGATTCAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | AGCAATCTGATGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCCCAGGTAACTTTGGTACAGCAGTAAGATaGCCACCTCACGGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SNLMEMSPQWRLLLPGNFGTAVR*PPHGSC Trigger: ACAGCTACCGTGAGGTGGGCATCTTACTGCTGTACC...AAAGTTACCTGGGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR TCA 90 bp | AGGGCTGTGCTATCCTGCCTGAGCTTTTCAAGAAAGATCTGTGGCCCCTATGTCACGACACCTCGAAGCTaGACCAAGCGATGCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RAVLSCLSFSRKICGPYVTTPRS*TKRCRS Trigger: ACTTCTGCATCGCTTGGTTCAGCTTCGAGGTGTCGT...GACATAGGGGCCACAGATCTTTCTTGAAAAGCTCAGGCAGGATAGCACAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CCA 90 bp | AGTGCCCTCATCTGTGAAATGGGGATAATCATCTGCCAGGCTAAAAAGGCTCCTTACTCCGGCAGGCTGTaGATGCACATGGCAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: SALICEMGIIICQAKKAPYSGRL*MHMAAM Trigger: CATCGCTGCCATGTGCATCCACAGCCTGCCGGAGTA...AGGAGCCTTTTTAGCCTGGCAGATGATTATCCCCATTTCACAGATGAGGGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR GCA 90 bp | CATATTGAATCATTAATCAAGCTAATGTCTCACCGGGCTTGCCTGCAAGCAATCCTGGTCACCAAGCGCTaGGCCAGCCAGCAGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HIESLIKLMSHRACLQAILVTKR*ASQQCE Trigger: CTCACACTGCTGGCTGGCGCAGCGCTTGGTGACCAG...GATTGCTTGCAGGCAAGCCCGGTGAGACATTAGCTTGATTAATGATTCAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 90 bp | GCTCCCGCTGCACGTCCGAGATCTCGTCGGGACACGGGTCCACGCTaGTCGGCGCGTCGCTGTCCTCGTCCCAGGCGCGAGGCCGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: APAARPRSRRDTGPR*SARRCPRPRREAAP Trigger: TGGCGCGGCCTCGCGCCTGGGACGAGGACAGCGACGCGCCGAGCAGCGTGGACCCGTGTCCCGACGAGATCTCGGACGTGCAGCGGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CCA 90 bp | GAGGCCGCGCCACACGCCGCTCCAGATACCGCGCGCGGCAGCACGTaGCCAGCGCGTTCTCGCCCAGGCCCCAGTAGTCAGCCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: EAAPHAAPDTARGST*PARSRPGPSSQPPG Trigger: GCCAGGAGGCTGACTACTGGGGCCTGGGCGAGAACGCGCTGGCCACGTGCTGCCGCGCGCGGTATCTGGAGCGGCGTGTGGCGCGGCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 90 bp | CCGCCGCCGCCGCCTCCCGAGCTTGGTACTCCGGCAGGCTGTGGATaGACATGGCAGCGATGGAGGCGAGCACCACGCCGATGGATACGC | + |
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Preference number: 5 (lower is better) Translates to: PPPPPPELGTPAGCG*TWQRWRRAPRRWIR Trigger: GCGTATCCATCGGCGTGGTGCTCGCCTCCATCGCTGCCATGTGCATCCACAGCCTGCCGGAGTACCAAGCTCGGGAGGCGGCGGCGGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CCA 90 bp | GCCACCGCCGCCGCCGCCTCCCGAGCTTGGTACTCCGGCAGGCTGTaGATGCACATGGCAGCGATGGAGGCGAGCACCACGCCGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: ATAAAASRAWYSGRL*MHMAAMEASTTPMD Trigger: ATCCATCGGCGTGGTGCTCGCCTCCATCGCTGCCATGTGCATCCACAGCCTGCCGGAGTACCAAGCTCGGGAGGCGGCGGCGGCGGTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 90 bp | TGCGCGTGCTGGGAGCCAGCAGCAGGCGCGACGACACCTCGAAGCTaGACCAAGCGATGCAGAAGTACTCCAGGCGGCGCAGCACCGGGT | + |
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Preference number: 5 (lower is better) Translates to: CACWEPAAGATTPRS*TKRCRSTPGGAAPG Trigger: ACCCGGTGCTGCGCCGCCTGGAGTACTTCTGCATCGCTTGGTTCAGCTTCGAGGTGTCGTCGCGCCTGCTGCTGGCTCCCAGCACGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 90 bp | TCCGATACCCCGTCAACGCTACTCAGCAAGTCCTCAAACTCGCGCTaGCCGCTGCTCCGCACGGCCGCCTCCAGTGCCTTCTGGCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SDTPSTLLSKSSNSR*PLLRTAASSAFWRR Trigger: CCGGCGCCAGAAGGCACTGGAGGCGGCCGTGCGGAGCAGCGGTCAGCGCGAGTTTGAGGACTTGCTGAGTAGCGTTGACGGGGTATCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 90 bp | CCCCGTCAACGCTACTCAGCAAGTCCTCAAACTCGCGCTGACCGCTaGTCCGCACGGCCGCCTCCAGTGCCTTCTGGCGCCGGTAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: PRQRYSASPQTRADR*SARPPPVPSGAGRS Trigger: ACTTCTACCGGCGCCAGAAGGCACTGGAGGCGGCCGTGCGGAGCAGCGGTCAGCGCGAGTTTGAGGACTTGCTGAGTAGCGTTGACGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CCA 90 bp | GCCGATGGATACGCAGCTGAAGAGCTTGCTGGGCAGCGAGTAGCCTaGATTCTCCATGGTGAGCCAGAGACGACGGCGCAGGCGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: ADGYAAEELAGQRVA*ILHGEPETTAQAAT Trigger: TGTGGCCGCCTGCGCCGTCGTCTCTGGCTCACCATGGAGAATCCAGGCTACTCGCTGCCCAGCAAGCTCTTCAGCTGCGTATCCATCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 90 bp | CGAAGGCGAAGACGCACAGCTCGTCTAGGACGTGCAGGTGCCCGGTaGGGTAGAAGTGTAGGAGGCCGAGAAAGAAGCCCGGATGCCGAT | + |
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Preference number: 5 (lower is better) Translates to: RRRRRTARLGRAGAR*GRSVGGRERSPDAD Trigger: ATCGGCATCCGGGCTTCTTTCTCGGCCTCCTACACTTCTACCGCACCGGGCACCTGCACGTCCTAGACGAGCTGTGCGTCTTCGCCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CAA 90 bp | AGCAATCTGATGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCCCAGGTAACTTTGGGTGGCAGAAGAAGTaGCGCGTGCTGGGAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SNLMEMSPQWRLLLPGNFGWQKK*RVLGAS Trigger: GCTGGCTCCCAGCACGCGCAACTTCTTCTGCCACCC...AAAGTTACCTGGGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CAA 90 bp | GAAGCAGAGGCCATGGAGGAACACTGCTTACTGACTCGCTCCCGTGGCCAGTTCACGATGTCAATGAGGTaGAGCGGGTGGCAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EAEAMEEHCLLTRSRGQFTMSMR*SGWQKK Trigger: CTTCTTCTGCCACCCGCTCAACCTCATTGACATCGT...GAACTGGCCACGGGAGCGAGTCAGTAAGCAGTGTTCCTCCATGGCCTCTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CAA 90 bp | GATGAGCTGGGCCTTCTCAGTAACCTCCTCTCTGGGTCACATGCTGTGACGGATCATGAGGCGGAACACTaGCACTACCTTGCCCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: DELGLLSNLLSGSHAVTDHEAEH*HYLAQV Trigger: GACCTGGGCAAGGTAGTGCAAGTGTTCCGCCTCATG...ATCCGTCACAGCATGTGACCCAGAGAGGAGGTTACTGAGAAGGCCCAGCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CAA 90 bp | CATATTGAATCATTAATCAAGCTAATGTCTCACCGGGCTTGCCTGCAAGCAATCCCCGAGGCCGCCAGCTaGCCACCCACAGTCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: HIESLIKLMSHRACLQAIPEAAS*PPTVSG Trigger: GCCAGAGACTGTGGGTGGCAAGCTGGCGGCCTCGGG...GATTGCTTGCAGGCAAGCCCGGTGAGACATTAGCTTGATTAATGATTCAATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CAA 90 bp | AGCAATCTGATGGAGATGTCCCCTCAGTGGAGGCTCCTCCTCCCAGGTAACTTTACCAGCAGGCAGGGATaGTGTGAAAGCCCTCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SNLMEMSPQWRLLLPGNFTSRQG*CESPRF Trigger: AAAACGAGGGCTTTCACACAATCCCTGCCTGCTGGT...AAAGTTACCTGGGAGGAGGAGCCTCCACTGAGGGGACATCTCCATCAGATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS-3UTR CAA 90 bp | AGGGCTGTGCTATCCTGCCTGAGCTTTTCAAGAAAGATCTGTGGCCCCTATGTCAATAACTGTGAGATTTaGCAGGCTCCCGGGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: RAVLSCLSFSRKICGPYVNNCEI*QAPGEL Trigger: AAGCTCCCCGGGAGCCTGCAAAATCTCACAGTTATT...GACATAGGGGCCACAGATCTTTCTTGAAAAGCTCAGGCAGGATAGCACAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 72 bp | CAGGCGGCGCAGCACCGGGTCGTCGCGCACCTCCTCTaGGCTGCGACCCGCGGCCACTGCAGCCACCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: QAAQHRVVAHLL*AATRGHCSHRR Trigger: GCGGCGGTGGCTGCAGTGGCCGCGGGTCGCAGCGCAGAGGAGGTGCGCGACGACCCGGTGCTGCGCCGCCTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 72 bp | GCACGTCCGAGATCTCGTCGGGACACGGGTCCACGCTaGTCGGCGCGTCGCTGTCCTCGTCCCAGGCGCGAG | + |
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Preference number: 6 (lower is better) Translates to: ARPRSRRDTGPR*SARRCPRPRRE Trigger: CTCGCGCCTGGGACGAGGACAGCGACGCGCCGAGCAGCGTGGACCCGTGTCCCGACGAGATCTCGGACGTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CCA 72 bp | CCACACGCCGCTCCAGATACCGCGCGCGGCAGCACGTaGCCAGCGCGTTCTCGCCCAGGCCCCAGTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PHAAPDTARGST*PARSRPGPSSQ Trigger: CTGACTACTGGGGCCTGGGCGAGAACGCGCTGGCCACGTGCTGCCGCGCGCGGTATCTGGAGCGGCGTGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CCA 72 bp | GCCGCCGCCTCCCGAGCTTGGTACTCCGGCAGGCTGTaGATGCACATGGCAGCGATGGAGGCGAGCACCACG | + |
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Preference number: 6 (lower is better) Translates to: AAASRAWYSGRL*MHMAAMEASTT Trigger: CGTGGTGCTCGCCTCCATCGCTGCCATGTGCATCCACAGCCTGCCGGAGTACCAAGCTCGGGAGGCGGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 72 bp | CTCCTCCCCGCTGGCTCCGCGCTGGTCACCAAGCGCTaGGCCAGCCAGCAGTGTGAGATAGAAGGGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLPAGSALVTKR*ASQQCEIEGQH Trigger: GTGCTGCCCTTCTATCTCACACTGCTGGCTGGCGCAGCGCTTGGTGACCAGCGCGGAGCCAGCGGGGAGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 72 bp | CGCTACTCAGCAAGTCCTCAAACTCGCGCTGACCGCTaGTCCGCACGGCCGCCTCCAGTGCCTTCTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RYSASPQTRADR*SARPPPVPSGA Trigger: GGCGCCAGAAGGCACTGGAGGCGGCCGTGCGGAGCAGCGGTCAGCGCGAGTTTGAGGACTTGCTGAGTAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 72 bp | GCTTGCTGGGCAGCGAGTAGCCTGGATTCTCCATGGTaGGCCAGAGACGACGGCGCAGGCGGCCACAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: ACWAASSLDSPW*ARDDGAGGHSE Trigger: CTCGCTGTGGCCGCCTGCGCCGTCGTCTCTGGCTCACCATGGAGAATCCAGGCTACTCGCTGCCCAGCAAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 72 bp | CCGTCAACGCTACTCAGCAAGTCCTCAAACTCGCGCTaGCCGCTGCTCCGCACGGCCGCCTCCAGTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSTLLSKSSNSR*PLLRTAASSAF Trigger: GAAGGCACTGGAGGCGGCCGTGCGGAGCAGCGGTCAGCGCGAGTTTGAGGACTTGCTGAGTAGCGTTGACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 72 bp | TGGGAGCCAGCAGCAGGCGCGACGACACCTCGAAGCTaGACCAAGCGATGCAGAAGTACTCCAGGCGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: WEPAAGATTPRS*TKRCRSTPGGA Trigger: TGCGCCGCCTGGAGTACTTCTGCATCGCTTGGTTCAGCTTCGAGGTGTCGTCGCGCCTGCTGCTGGCTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 72 bp | ACAGCAGTAAGATGCCCACCTCACGGTAGCTGTGCTTaGGCGTGGCGCCCAGCGAACGCAGCCCCGTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: TAVRCPPHGSCA*AWRPANAAPWS Trigger: ACTCCACGGGGCTGCGTTCGCTGGGCGCCACGCTCAAGCACAGCTACCGTGAGGTGGGCATCTTACTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CAA 90 bp | AGCACCGACACGATGTCAATGAGGTTGAGCGGGTGGCAGAAGAAGTaGCGCGTGCTGGGAGCCAGCAGCAGGCGCGACGACACCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: STDTMSMRLSGWQKK*RVLGASSRRDDTSK Trigger: CTTCGAGGTGTCGTCGCGCCTGCTGCTGGCTCCCAGCACGCGCAACTTCTTCTGCCACCCGCTCAACCTCATTGACATCGTGTCGGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS GCA 72 bp | AGACGCACAGCTCGTCTAGGACGTGCAGGTGCCCGGTaGGGTAGAAGTGTAGGAGGCCGAGAAAGAAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RRTARLGRAGAR*GRSVGGRERSP Trigger: CGGGCTTCTTTCTCGGCCTCCTACACTTCTACCGCACCGGGCACCTGCACGTCCTAGACGAGCTGTGCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS TCA 72 bp | CGATGGAGGCGAGCACCACGCCGATGGATACGCAGCTaGAGAGCTTGCTGGGCAGCGAGTAGCCTGGATTCT | + |
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Preference number: 6 (lower is better) Translates to: RWRRAPRRWIRS*RACWAASSLDS Trigger: AGAATCCAGGCTACTCGCTGCCCAGCAAGCTCTTCAGCTGCGTATCCATCGGCGTGGTGCTCGCCTCCATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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| CDS CCA 72 bp | TACGCAGCTGAAGAGCTTGCTGGGCAGCGAGTAGCCTaGATTCTCCATGGTGAGCCAGAGACGACGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: YAAEELAGQRVA*ILHGEPETTAQ Trigger: CTGCGCCGTCGTCTCTGGCTCACCATGGAGAATCCAGGCTACTCGCTGCCCAGCAAGCTCTTCAGCTGCGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045196.4 |
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