Pregenerated sensors for KCNQ5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028033Ensembl transcript IDs: ENSMUST00000029667.13, ENSMUST00000115300.8, ENSMUST00000173058.8, ENSMUST00000173404.2, ENSMUST00000174183.8
Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCATCAATGCCAAGGGCTGTGTCGGCGTCTATCACTGGCTTTGGCTaGGAACTCTTGAGCCGTAGTGAGGGCCTGAAGCGGGTTCGGTCG | + |
|
Preference number: 1 (lower is better) Translates to: SSMPRAVSASITGFG*ELLSRSEGLKRVRS Trigger: CGACCGAACCCGCTTCAGGCCCTCACTACGGCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGACACAGCCCTTGGCATTGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | GGGGATCTCCTGTCACCTACTGATGCTTGTCTGCTCTTAATGCTCTaGCCCCTTGGGCTAGCCATGCGCACTCGCTCCTTAAAGCTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: GDLLSPTDACLLLML*PLGLAMRTRSLKLS Trigger: GCTGAGCTTTAAGGAGCGAGTGCGCATGGCTAGCCCAAGGGGCCAGAGCATTAAGAGCAGACAAGCATCAGTAGGTGACAGGAGATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | AGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTaGTGGGTTGAGAGCCTTCCTTGCTTCCATCAACCACTTGACATC | + |
|
Preference number: 1 (lower is better) Translates to: SKGDCSGTAFCWGRG*WVESLPCFHQPLDI Trigger: GATGTCAAGTGGTTGATGGAAGCAAGGAAGGCTCTCAACCCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 90 bp | GCTGTCTGGAAGCTGTCAGCTCCCTCCTCTTCCTCAGCCCGTATTTaGAGTGAGCCTTGTTCAGTGCCAGGCAGGTTTCTCTGGCTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: AVWKLSAPSSSSARI*SEPCSVPGRFLWLL Trigger: CAAAAGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCACTCCAAATACGGGCTGAGGAAGAGGAGGGAGCTGACAGCTTCCAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 90 bp | CTGGAAGCTGTCAGCTCCCTCCTCTTCCTCAGCCCGTATTTGGAGTaGGCCTTGTTCAGTGCCAGGCAGGTTTCTCTGGCTTTTGCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: LEAVSSLLFLSPYLE*ALFSARQVSLAFAQ Trigger: TTGAGCAAAAGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCACTCCAAATACGGGCTGAGGAAGAGGAGGGAGCTGACAGCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | CTCCCTCCTCTTCCTCAGCCCGTATTTGGAGTGAGCCTTGTTCAGTaGCAGGCAGGTTTCTCTGGCTTTTGCTCAATGGTGAGGGATGTG | + |
|
Preference number: 1 (lower is better) Translates to: LPPLPQPVFGVSLVQ*QAGFSGFCSMVRDV Trigger: CACATCCCTCACCATTGAGCAAAAGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCACTCCAAATACGGGCTGAGGAAGAGGAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | ATAGTCAGAGGTCTGTTCACATTCAAAAGGCGGGATCTGAAAGGATaGCAGAGTGAGGGCGGAGGCAGAGCCTTTCCGGAGGACCTGTTG | + |
|
Preference number: 1 (lower is better) Translates to: IVRGLFTFKRRDLKG*QSEGGGRAFPEDLL Trigger: CAACAGGTCCTCCGGAAAGGCTCTGCCTCCGCCCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGAATGTGAACAGACCTCTGACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | GGACCTGTTGATAGATATCCAGCAGGCAGTCCAGCTTGGATTCGATaGACTGGACCTGTTTCTCAACCTTCACAACCCGGGCGAGCATGC | + |
|
Preference number: 1 (lower is better) Translates to: GPVDRYPAGSPAWIR*TGPVSQPSQPGRAC Trigger: GCATGCTCGCCCGGGTTGTGAAGGTTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCTGGATATCTATCAACAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | CTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGTaGCTACCACGGAGGAGCCGTCATTTTGACTCATGGGTACCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: LLAWVRRLFGLQCYW*LPRRSRHFDSWVPG Trigger: CCCAGGTACCCATGAGTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | GGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTaGTGGCTACCACGGAGGAGCCGTCATTTTGACTCATGGGTACCT | + |
|
Preference number: 1 (lower is better) Translates to: GLLAWVRRLFGLQCY*WLPRRSRHFDSWVP Trigger: AGGTACCCATGAGTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | TCACCCTGGCTGGCCTGGAACACACCTTGTAGACCAGACTGGCCTTaGACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: SPWLAWNTPCRPDWP*THKDPPNFASQILG Trigger: TCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTTCAAGGCCAGTCTGGTCTACAAGGTGTGTTCCAGGCCAGCCAGGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | ACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGTTGAGAGCCTTCCTTaGTTCCATCAACCACTTGACATCCCTAGAGATTCTGCTCATTTG | + |
|
Preference number: 1 (lower is better) Translates to: TAFCWGRGWWVESLP*FHQPLDIPRDSAHL Trigger: CAAATGAGCAGAATCTCTAGGGATGTCAAGTGGTTGATGGAAGCAAGGAAGGCTCTCAACCCACCAGCCTCTCCCCCAGCAGAACGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | TCACAATTCTTGCTGCCAGTGGGGTTCAACCTGAGACAGTATCAGTaGTGTCTGGAAGCTGTCAGCTCCCTCCTCTTCCTCAGCCCGTAT | + |
|
Preference number: 1 (lower is better) Translates to: SQFLLPVGFNLRQYQ*CLEAVSSLLFLSPY Trigger: ATACGGGCTGAGGAAGAGGAGGGAGCTGACAGCTTCCAGACAGCACTGATACTGTCTCAGGTTGAACCCCACTGGCAGCAAGAATTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 90 bp | TGGACTGGACCTGTTTCTCAACCTTCACAACCCGGGCGAGCATGCTaGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTTTCTCTCGGC | + |
|
Preference number: 1 (lower is better) Translates to: WTGPVSQPSQPGRAC*GHLLSRVLLLFSLG Trigger: GCCGAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTGTGAAGGTTGAGAAACAGGTCCAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | CTTTCCGGAGGACCTGTTGATAGATATCCAGCAGGCAGTCCAGCTTaGATTCGATGGACTGGACCTGTTTCTCAACCTTCACAACCCGGG | + |
|
Preference number: 1 (lower is better) Translates to: LSGGPVDRYPAGSPA*IRWTGPVSQPSQPG Trigger: CCCGGGTTGTGAAGGTTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCTGGATATCTATCAACAGGTCCTCCGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | AGGTCTGTTCACATTCAAAAGGCGGGATCTGAAAGGATGCCAGAGTaGGGGCGGAGGCAGAGCCTTTCCGGAGGACCTGTTGATAGATAT | + |
|
Preference number: 1 (lower is better) Translates to: RSVHIQKAGSERMPE*GRRQSLSGGPVDRY Trigger: ATATCTATCAACAGGTCCTCCGGAAAGGCTCTGCCTCCGCCCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGAATGTGAACAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 90 bp | AAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTaGGACCACACCCTGCATGTGTCCTTGAGGGGTGAGAGAGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: KDPPNFASQILGLEV*DHTLHVSLRGERER Trigger: TCTCTCTCTCTCACCCCTCAAGGACACATGCAGGGTGTGGTCGCACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | CGATGGACTGGACCTGTTTCTCAACCTTCACAACCCGGGCGAGCATaGTGGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTTTCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: RWTGPVSQPSQPGRA*WGHLLSRVLLLFSL Trigger: GAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTGTGAAGGTTGAGAAACAGGTCCAGTCCATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | TGGTTTGCAATGTTATTGGTGGCTACCACGGAGGAGCCGTCATTTTaGCTCATGGGTACCTGGGTAGCTTGGCTGTGCATAGTAGGGCTA | + |
|
Preference number: 1 (lower is better) Translates to: WFAMLLVATTEEPSF*LMGTWVAWLCIVGL Trigger: TAGCCCTACTATGCACAGCCAAGCTACCCAGGTACCCATGAGTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 90 bp | GGTAGGGCTGCAGGTGTGCAAGGCCTTCAGATGTGGCTTCCAGGTTaGAATGGAAACAGATTTTTCATCAGCTGCATAACTACGCCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: GRAAGVQGLQMWLPG*NGNRFFISCITTPD Trigger: GTCTGGCGTAGTTATGCAGCTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTGCACACCTGCAGCCCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | ACGGTTTTAAGTGGTGGGGTGAGGTCCTCCACAGAGACGTCACACTaGCATCCTTTCTCATCATACACATCATCAATGCCAAGGGCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: TVLSGGVRSSTETSH*HPFSSYTSSMPRAV Trigger: CACAGCCCTTGGCATTGATGATGTGTATGATGAGAAAGGATGCCAGTGTGACGTCTCTGTGGAGGACCTCACCCCACCACTTAAAACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | ATCTGTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTaGTTTGCAATGTTATTGGTGGCTACCACGGAGGAGCCGTCATTT | + |
|
Preference number: 1 (lower is better) Translates to: ICKVVGAAGLGAALI*FAMLLVATTEEPSF Trigger: AAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACTTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | CTTTTCCTCAGGGAACGGTCCTTGGTCAGGTTTGACTGTGCAAACTaGACACTTTCCTTGGAGGCAACAAGGCAGGTGGTGACATCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: LFLRERSLVRFDCAN*TLSLEATRQVVTSE Trigger: TTCTGATGTCACCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | TCCCATGTCGAAACTTTTCCTCAGGGAACGGTCCTTGGTCAGGTTTaGCTGTGCAAACTGAACACTTTCCTTGGAGGCAACAAGGCAGGT | + |
|
Preference number: 1 (lower is better) Translates to: SHVETFPQGTVLGQV*LCKLNTFLGGNKAG Trigger: ACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAGTTTCGACATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | GGCTGCAGGTGTGCAAGGCCTTCAGATGTGGCTTCCAGGTTGCAATaGAAACAGATTTTTCATCAGCTGCATAACTACGCCAGACACACT | + |
|
Preference number: 1 (lower is better) Translates to: GCRCARPSDVASRLQ*KQIFHQLHNYARHT Trigger: AGTGTGTCTGGCGTAGTTATGCAGCTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTGCACACCTGCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | ACCTCTATGTCCACTAAATGGGAATTGTTAGTCACCCTGGCCATTTaGGGGGACAGGATGGGCAAACCTGTGGTTGTATCCTCACAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: TSMSTKWELLVTLAI*GDRMGKPVVVSSQR Trigger: TCTCTGTGAGGATACAACCACAGGTTTGCCCATCCTGTCCCCTCAAATGGCCAGGGTGACTAACAATTCCCATTTAGTGGACATAGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 90 bp | ACTGTGCAAACTGAACACTTTCCTTGGAGGCAACAAGGCAGGTGGTaGCATCAGAAATACTCTCTTGTAAGCCGGTGGGGTTTGAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: TVQTEHFPWRQQGRW*HQKYSLVSRWGLRA Trigger: TGCTCTCAAACCCCACCGGCTTACAAGAGAGTATTTCTGATGTCACCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGTTTGCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 90 bp | TTTGGAGTGAGCCTTGTTCAGTGCCAGGCAGGTTTCTCTGGCTTTTaGTCAATGGTGAGGGATGTGTTGTGGGTATACACACATGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: FGVSLVQCQAGFSGF*SMVRDVLWVYTHVC Trigger: ACACACATGTGTGTATACCCACAACACATCCCTCACCATTGAGCAAAAGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCACTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 90 bp | CAGCTTCTGATTGGTAGGGCTGCAGGTGTGCAAGGCCTTCAGATGTaGCTTCCAGGTTGCAATGGAAACAGATTTTTCATCAGCTGCATA | + |
|
Preference number: 1 (lower is better) Translates to: QLLIGRAAGVQGLQM*LPGCNGNRFFISCI Trigger: TATGCAGCTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTGCACACCTGCAGCCCTACCAATCAGAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | GAGTTTCTCCTCCCATGTCGAAACTTTTCCTCAGGGAACGGTCCTTaGTCAGGTTTGACTGTGCAAACTGAACACTTTCCTTGGAGGCAA | + |
|
Preference number: 1 (lower is better) Translates to: EFLLPCRNFSSGNGP*SGLTVQTEHFPWRQ Trigger: TTGCCTCCAAGGAAAGTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAGTTTCGACATGGGAGGAGAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | TCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTGGGCACCATaGGGCGGACAGACAACAGAGTTTCTCCTCCCATGTCGAAACTTT | + |
|
Preference number: 1 (lower is better) Translates to: SGFVQTEICPNPWAP*GGQTTEFLLPCRNF Trigger: AAAGTTTCGACATGGGAGGAGAAACTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | GGCAAACTGAGGGCGTCTGTACTGTCTCCTGTCTTACAAATGTTCTaGGATGACCGTGACCTTCCAGTCCTTAGAGAGTCTGATGAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: GKLRASVLSPVLQMF*DDRDLPVLRESDEK Trigger: TTTCTCATCAGACTCTCTAAGGACTGGAAGGTCACGGTCATCTCAGAACATTTGTAAGACAGGAGACAGTACAGACGCCCTCAGTTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | ATGAAACTTCATAATTCTGATTGCTCGGATGACGGTTTTAAGTGGTaGGGTGAGGTCCTCCACAGAGACGTCACACTGGCATCCTTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: MKLHNSDCSDDGFKW*GEVLHRDVTLASFL Trigger: GAGAAAGGATGCCAGTGTGACGTCTCTGTGGAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATGAAGTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | CTGAATCTTCAGCTTTCAGCTATGTTAGATGAACTGTACTGTGCTTaGGGCCCGAGGATGCCTAAGAAGAAGGGGTCCCTGATACATTCA | + |
|
Preference number: 1 (lower is better) Translates to: LNLQLSAMLDELYCA*GPRMPKKKGSLIHS Trigger: TGAATGTATCAGGGACCCCTTCTTCTTAGGCATCCTCGGGCCTCAAGCACAGTACAGTTCATCTAACATAGCTGAAAGCTGAAGATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | ACCTCGTTAAACAGCCGCTGTTTTGTGCTGAGCCAGACAGGTCTTTaGTATCCACAGGACTTTGATAGTCAGAGGTCTGTTCACATTCAA | + |
|
Preference number: 1 (lower is better) Translates to: TSLNSRCFVLSQTGL*YPQDFDSQRSVHIQ Trigger: TTGAATGTGAACAGACCTCTGACTATCAAAGTCCTGTGGATAGCAAAGACCTGTCTGGCTCAGCACAAAACAGCGGCTGTTTAACGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | AACATGAAACTTCATAATTCTGATTGCTCGGATGACGGTTTTAAGTaGTGGGGTGAGGTCCTCCACAGAGACGTCACACTGGCATCCTTT | + |
|
Preference number: 1 (lower is better) Translates to: NMKLHNSDCSDDGFK*WGEVLHRDVTLASF Trigger: AAAGGATGCCAGTGTGACGTCTCTGTGGAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATGAAGTTTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 90 bp | TTGACTCGCTGCCTGAAAACTGTAAGTTCAGTTCTTCTGTCGACCTaGTCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LTRCLKTVSSVLLST*SGFVQTEICPNPWA Trigger: TGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAAGAACTGAACTTACAGTTTTCAGGCAGCGAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 90 bp | ATATCCCGGCATCTTCACACACCCCATAGCATCAGCAGCGACTGTTaGCTTGGGATTTTAGACTCAAGGTACGTTATTAAATGCATGGAT | + |
|
Preference number: 1 (lower is better) Translates to: ISRHLHTPHSISSDC*LGILDSRYVIKCMD Trigger: ATCCATGCATTTAATAACGTACCTTGAGTCTAAAATCCCAAGCCAACAGTCGCTGCTGATGCTATGGGGTGTGTGAAGATGCCGGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 90 bp | ATTCGCAGCGTAAAGGACAACATGAAAACAATGTGCGAAACTGCTTaGCACAGCGCTAAGTCACCAGAAGCACACAGATTGACATTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: IRSVKDNMKTMCETA*HSAKSPEAHRLTFK Trigger: TTTGAATGTCAATCTGTGTGCTTCTGGTGACTTAGCGCTGTGGCAAGCAGTTTCGCACATTGTTTTCATGTTGTCCTTTACGCTGCGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 90 bp | CAATTAAAAGATAACAGGCTTATAAATGGCCTTTCGCGTTCTTCCTaGCTCTTGTGCGATTTCAACTCTATAGACGGGCTTCCAGAGTAC | + |
|
Preference number: 1 (lower is better) Translates to: QLKDNRLINGLSRSS*LLCDFNSIDGLPEY Trigger: GTACTCTGGAAGCCCGTCTATAGAGTTGAAATCGCACAAGAGTCAGGAAGAACGCGAAAGGCCATTTATAAGCCTGTTATCTTTTAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 90 bp | TGTTGTCTCGTGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCTaGCGTCATTTGTCCTTTTCCAAGAATTTGATCAACGCGTGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: CCLVFCCYFLSALLI*RHLSFSKNLINACL Trigger: CAGACACGCGTTGATCAAATTCTTGGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGAGAGAAAATAACAGCAGAACACGAGACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCAGAGGTTCTGGCCTGGACAAGTGCTTGATGGCCGAGAGAGGAGGAGGGCCCGGGCGAGCATGCTaGGGTCATCTGTTGTCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: ESRGSGLDKCLMAERGGGPGRAC*GHLLSR Trigger: ACGAGACAACAGATGACCCCAGCATGCTCGCCCGGG...CCCTCCTCCTCTCTCGGCCATCAAGCACTTGTCCAGGCCAGAACCTCTGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | CCAAGGGCTGTGTCGGCGTCTATCACTGGCTTTGGCTGGGAACTCTaGAGCCGTAGTGAGGGCCTGAAGCGGGTTCGGTCGTTGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PRAVSASITGFGWEL*SRSEGLKRVRSLKL Trigger: GAGCTTCAACGACCGAACCCGCTTCAGGCCCTCACTACGGCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGACACAGCCCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCCTCGGCAGTGATGTCAGTGCTCGGGGATCTCCTGTCACCTACTGATGCTAATGCTCTGGCCCCTTaGGCTAGCCATGCGCACTCG | + |
|
Preference number: 2 (lower is better) Translates to: LPSAVMSVLGDLLSPTDANALAP*ASHAHS Trigger: CGAGTGCGCATGGCTAGCCCAAGGGGCCAGAGCATT...AGCATCAGTAGGTGACAGGAGATCCCCGAGCACTGACATCACTGCCGAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTGGGGGAGAGGCTGGTaGGTTGAGAGCCTTCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCWGRGW*VESLPC Trigger: GCAAGGAAGGCTCTCAACCCACCAGCCTCTCCCCCA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCAGGCGGTGGGGTGCCGTCAAAAGTATCTGTTTCTGTCTCTTCGGCACCGACCTACGCCAGACACACTaGATGAGGTTGGCAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRWGAVKSICFCLFGTDLRQTH*MRLAAG Trigger: CCCAGCTGCCAACCTCATCCAGTGTGTCTGGCGTAG...GTCGGTGCCGAAGAGACAGAAACAGATACTTTTGACGGCACCCCACCGCCTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGTCACCCTGGCCATTTaGGGGGACAGGATGGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCVTLAI*GDRMGK Trigger: TTTGCCCATCCTGTCCCCTCAAATGGCCAGGGTGAC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGTCACCCTGGCCATTTaGGGGGACAGGATGGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWVTLAI*GDRMGK Trigger: TTTGCCCATCCTGTCCCCTCAAATGGCCAGGGTGAC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTCTGGGATTAGAGGTGTaGGACCACACCCTGCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCLGLEV*DHTLHV Trigger: CACATGCAGGGTGTGGTCGCACACCTCTAATCCCAG...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGTGAGCCTTGTTCAGTaGCAGGCAGGTTTCTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCVSLVQ*QAGFSG Trigger: GCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCAC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGGGAACCGGAGACTTCTaGGCGCTGACGTGGCGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLGLLAWVRRLFGLQCYWGTGDF*ALTWRK Trigger: TTTTCGCCACGTCAGCGCTCAGAAGTCTCCGGTTCC...CCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTCTGTTCACATTCAAAAGGCGGGATCTGAAAGGATGCCAGAGTGAGGGCGGAAGCGGGTTCGGTCGTTaGAGCTCCAACTCTTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GLFTFKRRDLKGCQSEGGSGFGR*SSNSSG Trigger: TCCAGAAGAGTTGGAGCTTCAACGACCGAACCCGCT...TCCGCCCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGAATGTGAACAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTTCTGGCCTGGACAAGTGCTTGATGGCCGAGAGAGGAGGAGGGATCTGTAAATCAAAAGGCGGGATCTaGAAGGATGCCAGAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GSGLDKCLMAERGGGICKSKGGI*KDARVR Trigger: CCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGA...TTTACAGATCCCTCCTCCTCTCTCGGCCATCAAGCACTTGTCCAGGCCAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTATGTGCGAAACTGCTTaGCACAGCGCTAAGTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCMCETA*HSAKSP Trigger: TGGTGACTTAGCGCTGTGGCAAGCAGTTTCGCACAT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGGGACAGCGTTCTGCTaGGGGAGAGGCTGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNGTAFC*GRGWWV Trigger: AACCCACCAGCCTCTCCCCCAGCAGAACGCTGTCCC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGAACTCTTCTGGACTTTaGTGGGGCTGCCCTCGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLGLLAWVRRLFGLQCYWNSSGL*WGCPRQ Trigger: CTGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTT...CCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGAGCCTTTCCGGAGGACCTGTTGATAGATATCCAGCAGGCAGTCCAGCTTGAGACTTCTGAGCGCTaGCGTGGCGAAAATATTACC | + |
|
Preference number: 2 (lower is better) Translates to: GRAFPEDLLIDIQQAVQLETSER*RGENIT Trigger: GGTAATATTTTCGCCACGTCAGCGCTCAGAAGTCTC...AAGCTGGACTGCCTGCTGGATATCTATCAACAGGTCCTCCGGAAAGGCTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGTCAGGGACAGCGTTCTaGTGGGGGAGAGGCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVSGTAF*WGRGWW Trigger: CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGA...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACCCGGGCGAGCATGCTGGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTTGTCTATCACTGGCTTTaGCTGGGAACTCTTGAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: QPGRACWGHLLSRVLLLFVYHWL*LGTLEP Trigger: CGGCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGAC...AAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | TACCACGGAGGAGCCGTCATTTTGACTCATGGGTACCTGGGTAGCTaGGCTGTGCATAGTAGGGCTAAGCGCATAGAAAGTCTGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: YHGGAVILTHGYLGS*AVHSRAKRIESLST Trigger: AGTGCTCAGACTTTCTATGCGCTTAGCCCTACTATGCACAGCCAAGCTACCCAGGTACCCATGAGTCAAAATGACGGCTCCTCCGTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | GTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTaGCAATGTTATTGGTGGCTACCACGGAGGAGCCGTCATTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: VKLLGLLAWVRRLFG*QCYWWLPRRSRHFD Trigger: GTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | GTCGACCTGATCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTaGGGCACCATGGGGCGGACAGACAACAGAGTTTCTCCTCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: VDLIRFCTDRDLPKS*GTMGRTDNRVSPPM Trigger: CATGGGAGGAGAAACTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGATGACTAAGGAGTTTTaGTCTGCAGACCCATCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWMTKEF*SADPSS Trigger: ACTGGATGGGTCTGCAGATCAAAACTCCTTAGTCAT...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGAGAGGCTGGTGGGTTaGGAGCCTTCCTTGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNERLVG*EPSLLP Trigger: TGGAAGCAAGGAAGGCTCTCAACCCACCAGCCTCTC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCGGCTCTTCTTATCTGACGTCATTTGTCCTTTTCCAAGAATTTGATCAACGCGGCTGCCCTCGGCAGTaGTGTCAGTGCTCGGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: LGSSYLTSFVLFQEFDQRGCPRQ*CQCSGI Trigger: GATCCCCGAGCACTGACATCACTGCCGAGGGCAGCC...GCGTTGATCAAATTCTTGGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | CGCAGGCGGTGGGGTGCCGTCAAAAGTATCTGTTTCTGTCTCTTCGGCACCGACAGAAAGTCTGAGCACTaGACTCATTTGGTGTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RRRWGAVKSICFCLFGTDRKSEH*THLVLG Trigger: TCCTAACACCAAATGAGTTCAGTGCTCAGACTTTCT...GTCGGTGCCGAAGAGACAGAAACAGATACTTTTGACGGCACCCCACCGCCTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTGCAGACCCATCCAGTaGTATCTGGTTTGCAGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCCRPIQ*YLVCSY Trigger: ATAACTGCAAACCAGATAGCACTGGATGGGTCTGCA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGTGGGTAGCTTGGCTGTaGATAGTAGGGCTAAGCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLGLLAWVRRLFGLQCYWWVAWL*IVGLSA Trigger: TGCGCTTAGCCCTACTATGCACAGCCAAGCTACCCA...CCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | CCGAGGATGCCTAAGAAGAAGGGGTCCCTGATACATTCACAATTCTaGCTGCCAGTGGGGTTCAACCTGAGACAGTATCAGTGCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PRMPKKKGSLIHSQF*LPVGFNLRQYQCCL Trigger: CAGACAGCACTGATACTGTCTCAGGTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTTAGGCATCCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 90 bp | TTGGTTTGCAATGTTATTGGTGGCTACCACGGAGGAGCCGTCATTTaGACTCATGGGTACCTGGGTAGCTTGGCTGTGCATAGTAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LVCNVIGGYHGGAVI*THGYLGSLAVHSRA Trigger: AGCCCTACTATGCACAGCCAAGCTACCCAGGTACCCATGAGTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGTCAACTCTTGCAATTaGACTAATATCCCGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCVNSCN*TNIPAS Trigger: AGATGCCGGGATATTAGTTCAATTGCAAGAGTTGAC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGAGAGGCTGGTGGGTTaGGAGCCTTCCTTGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVERLVG*EPSLLP Trigger: TGGAAGCAAGGAAGGCTCTCAACCCACCAGCCTCTC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTAAAGCTCAGCTTCTaGTTGGTAGGGCTGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CKVVGAAGLGAALIWFAMLKLSF*LVGLQV Trigger: CACCTGCAGCCCTACCAATCAGAAGCTGAGCTTTAA...CATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGTGAGCCTTGTTCAGTaGCAGGCAGGTTTCTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNVSLVQ*QAGFSG Trigger: GCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCAC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTAAAGCAGACACAAAGTaGTCATGGCTTCAATGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCKADTK*SWLQCA Trigger: TGCACATTGAAGCCATGACCACTTTGTGTCTGCTTT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGACTCGCTGCCTGAAAACTGGTACCTGGGTAGCTTaGCTGTGCATAGTAGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: WDKNLDCLESRLTRCLKTGTWVA*LCIVGL Trigger: TAGCCCTACTATGCACAGCCAAGCTACCCAGGTACC...AGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | GTTTCTCAACCTTCACAACCCGGGCGAGCATGCTGGGGTCATCTGTaGTCTCGTGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSQPSQPGRACWGHL*SRVLLLFSLGSSYL Trigger: CAGATAAGAAGAGCCGAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTGTGAAGGTTGAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | CTGAACTCATTTGGTGTTAGGATGAACTGCAGGCCTCTTGAGATGTaGGCACTGGCTGACCTCGTTAAACAGCCGCTGTTTTGTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LNSFGVRMNCRPLEM*ALADLVKQPLFCAE Trigger: CTCAGCACAAAACAGCGGCTGTTTAACGAGGTCAGCCAGTGCCAACATCTCAAGAGGCCTGCAGTTCATCCTAACACCAAATGAGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGCCCTGCATGTGTCCTTaGGGGGTGAGAGAGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQPCMCP*GVRERE Trigger: CTCTCTCTCTCTCACCCCTCAAGGACACATGCAGGG...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCGGCTCTTCTTATCTGACGTCATTTGTCCTTTTCCAAGAATTTGATCAACGCGCCAGACACACTGGATaGGGTTGGCAGCTGGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGSSYLTSFVLFQEFDQRARHTG*GWQLGS Trigger: GGAACCCAGCTGCCAACCTCATCCAGTGTGTCTGGC...GCGTTGATCAAATTCTTGGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTCAGGGACAGCGTTCTaGTGGGGGAGAGGCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYSGTAF*WGRGWW Trigger: CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGTCGACCTGATCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTGGGAAGGAGTGCGAAGCCTaGAGAGAGCAGTCTTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FCRPDQVLYRQRFAQILGKECEA*REQSSQ Trigger: CTGGGAAGACTGCTCTCTGCAGGCTTCGCACTCCTT...CCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGATTTATTTCAAATTTTaGGCTCCTCTCCTCCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWIYFKF*APLLLA Trigger: GGCAAGGAGGAGAGGAGCCCAAAATTTGAAATAAAT...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGGGACAGCGTTCTGCTaGGGGAGAGGCTGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYGTAFC*GRGWWV Trigger: AACCCACCAGCCTCTCCCCCAGCAGAACGCTGTCCC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 90 bp | TGCCAGGCAGGTTTCTCTGGCTTTTGCTCAATGGTGAGGGATGTGTaGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACAT | + |
|
Preference number: 2 (lower is better) Translates to: CQAGFSGFCSMVRDV*WVYTHVCNVRWRVH Trigger: ATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACACATCCCTCACCATTGAGCAAAAGCCAGAGAAACCTGCCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 90 bp | ATTTGGAGTGAGCCTTGTTCAGTGCCAGGCAGGTTTCTCTGGCTTTaGCTCAATGGTGAGGGATGTGTTGTGGGTATACACACATGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IWSEPCSVPGRFLWL*LNGEGCVVGIHTCV Trigger: CACACATGTGTGTATACCCACAACACATCCCTCACCATTGAGCAAAAGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCACTCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 90 bp | TTCAGTTCTTCTGTCGACCTGATCAGGTTTTGTACAGACAGAGATTaGCCCAAATCCTTGGGCACCATGGGGCGGACAGACAACAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: FSSSVDLIRFCTDRD*PKSLGTMGRTDNRV Trigger: AACTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAAGAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTAGCCATGCGCACTCGCTCCTTAAAGCTCAGCTTCTGATTGGTAGGGCTGCAGCGAAAATATTACCCTaGGTTTTTGCAGAGACAACT | + |
|
Preference number: 2 (lower is better) Translates to: ASHAHSLLKAQLLIGRAAAKILP*VFAETT Trigger: AGTTGTCTCTGCAAAAACTCAGGGTAATATTTTCGC...TGCAGCCCTACCAATCAGAAGCTGAGCTTTAAGGAGCGAGTGCGCATGGCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACAAGAGAGAATTGGTTTaGTTGAGGGTGGAGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNKRELV*LRVEAG Trigger: GCCAGCCTCCACCCTCAAGCAAACCAATTCTCTCTT...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATTTGGTGTTAGGATGAACTGCAGGCCTCTTGAGATGTTGGCACTGGCTGACTGCTTCTGGCGGTGCTaGTCCTGTACTTTTAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: SFGVRMNCRPLEMLALADCFWRC*SCTFNA Trigger: TGCATTAAAAGTACAGGAGCAGCACCGCCAGAAGCA...GTCAGCCAGTGCCAACATCTCAAGAGGCCTGCAGTTCATCCTAACACCAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTTCCTCAGGGAACGGTCCTTGGTCAGGTTTGACTGTGCAAACTGAACACCATACACATCATCAATaGCAAGGGCTGTGTCGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: NFSSGNGPWSGLTVQTEHHTHHQ*QGLCRR Trigger: ACGCCGACACAGCCCTTGGCATTGATGATGTGTATG...GTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTGTTCACATTCAAAAGGCGGGATCTGAAAGGATGCCAGAGTGAGGGCGGATGTTGTCTCGTGTTCTaGTGTTATTTTCTCTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLFTFKRRDLKGCQSEGGCCLVF*CYFLSA Trigger: AGCCGAGAGAAAATAACAGCAGAACACGAGACAACA...TCCGCCCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGAATGTGAACAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTCCATCCAGTGCTATCTaGTTTGCAGTTATAAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCPSSAI*FAVINV Trigger: AACATTTATAACTGCAAACCAGATAGCACTGGATGG...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGGATTCTCTCCACTTGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGGATGACGGTTTTAAGTaGTGGGGTGAGGTCCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: IWILSTWDKNLDCLESRLDDGFK*WGEVLH Trigger: GTGGAGGACCTCACCCCACCACTTAAAACCGTCATC...CAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 90 bp | ATTCTCTCCACTTGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTaGACTCGCTGCCTGAAAACTGTAAGTTCAGTTCTTCTGTCGACC | + |
|
Preference number: 2 (lower is better) Translates to: ILSTWDKNLDCLESR*TRCLKTVSSVLLST Trigger: GGTCGACAGAAGAACTGAACTTACAGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCAAGTGGAGAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGACTCGCTGCCTGAAAACTTCTCCTGTCACCTACTaGTGCTTGTCTGCTCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: WDKNLDCLESRLTRCLKTSPVTY*CLSALN Trigger: ATTAAGAGCAGACAAGCATCAGTAGGTGACAGGAGA...AGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGACTCGCTGCCTGAAAACTTCGGCTCTTCTTATCTaGCGTCATTTGTCCTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: WDKNLDCLESRLTRCLKTSALLI*RHLSFS Trigger: GGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGA...AGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTTTGAGGGGACAGGATaGGCAAACCTGTGGTTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNFEGTG*ANLWLY Trigger: ATACAACCACAGGTTTGCCCATCCTGTCCCCTCAAA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGCTTGAGGGTGGAGGCTaGCTGAAACCTGGTGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQLEGGG*LKPGEV Trigger: AACTTCACCAGGTTTCAGCCAGCCTCCACCCTCAAG...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGTCTCTCTGTCACCCTaGCTGGCCTGGAACACACCT | + |
|
Preference number: 2 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVVSLSP*LAWNTP Trigger: AGGTGTGTTCCAGGCCAGCCAGGGTGACAGAGAGAC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCCAAGGCCTTCAGATGTaGCTTCCAGGTTGCAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVICCLVFCCYFLSALLIQGLQM*LPGCNG Trigger: TCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTG...GATAAGAAGAGCCGAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGGATTCTCTCCACTTGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGTCTCTTGTAAGCCGGTaGGGTTTGAGAGCAGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IWILSTWDKNLDCLESRLSLVSR*GLRAEV Trigger: AACCTCTGCTCTCAAACCCCACCGGCTTACAAGAGA...CAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGTCGACCTGATCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTGGGACTGAACACTTTCCTTaGAGGCAACAAGGCAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FCRPDQVLYRQRFAQILGTEHFP*RQQGRW Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGT...CCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACCTGGCAAAGGTTTCTTaGAATAAGCAGCCATTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNLAKVS*NKQPFR Trigger: CCGAAATGGCTGCTTATTTCAAGAAACCTTTGCCAG...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGAACTGTACTGTGCTTaGGGCCCGAGGATGCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYELYCA*GPRMPK Trigger: CTTAGGCATCCTCGGGCCTCAAGCACAGTACAGTTC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTATGTGCGAAACTGCTTaGCACAGCGCTAAGTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGMCETA*HSAKSP Trigger: TGGTGACTTAGCGCTGTGGCAAGCAGTTTCGCACAT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGAGATTTTTCATCAGCTaGATAACTACGCCAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: CKVVGAAGLGAALIWFAMRFFIS*ITTPDT Trigger: TGTGTCTGGCGTAGTTATGCAGCTGATGAAAAATCT...CATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACTTTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTCACCCTGGCTGGCCTaGAACACACCTTGTAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYSPWLA*NTPCRP Trigger: TGGTCTACAAGGTGTGTTCCAGGCCAGCCAGGGTGA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATCTCTGTCACCCTGGCTaGCCTGGAACACACCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYLCHPG*PGTHLV Trigger: TACAAGGTGTGTTCCAGGCCAGCCAGGGTGACAGAG...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGGCTTCCAGGTTGCAATaGAAACAGATTTTTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLGLLAWVRRLFGLQCYWASRLQ*KQIFHQ Trigger: CTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGC...CCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTCTTTGCTATCCACAGGACTTTGATAGTCAGAGGTCTGTTCACATTCAAGTCGGCGTCTATCACTaGCTTTGGCTGGGAACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TGLCYPQDFDSQRSVHIQVGVYH*LWLGTL Trigger: AAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGAC...TTGAATGTGAACAGACCTCTGACTATCAAAGTCCTGTGGATAGCAAAGACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGTCAACTCTTGCAATTaGACTAATATCCCGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNVNSCN*TNIPAS Trigger: AGATGCCGGGATATTAGTTCAATTGCAAGAGTTGAC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGAGAATTGGTTTGCTTaGGGGTGGAGGCTGGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVENWFA*GWRLAE Trigger: TTCAGCCAGCCTCCACCCTCAAGCAAACCAATTCTC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTGGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTTTCTCTCGGCTCTTAAATGCTTCTGGCGGTaGTGCTCCTGTACTTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: HAGVICCLVFCCYFLSALKCFWR*CSCTFN Trigger: ATTAAAAGTACAGGAGCAGCACCGCCAGAAGCATTT...AAGAGCCGAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTGGTTTGCAATGTTATTGGTGGCTACCACGGAGGAGCCGTCATTTTGACGGTGTTAGGATGAACTaGAGGCCTCTTGAGATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LFGLQCYWWLPRRSRHFDGVRMN*RPLEML Trigger: CAACATCTCAAGAGGCCTGCAGTTCATCCTAACACC...GTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGCAGCGACTGTTGGCTTaGGATTTTAGACTCAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVQRLLA*DFRLKV Trigger: TACCTTGAGTCTAAAATCCCAAGCCAACAGTCGCTG...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGTTTGAGGGGACAGGATaGGCAAACCTGTGGTTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQFEGTG*ANLWLY Trigger: ATACAACCACAGGTTTGCCCATCCTGTCCCCTCAAA...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGAGTATCAGTGCTGTCTaGAAGCTGTCAGCTCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVSISAV*KLSAPS Trigger: GGAGGGAGCTGACAGCTTCCAGACAGCACTGATACT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTCTTTGCTATCCACAGGACTTTGATAGTCAGAGGTCTGTTCACATTCAAATCACTGGCTTTGGCTaGGAACTCTTGAGCCGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: TGLCYPQDFDSQRSVHIQITGFG*ELLSRS Trigger: ACTACGGCTCAAGAGTTCCCAGCCAAAGCCAGTGAT...TTGAATGTGAACAGACCTCTGACTATCAAAGTCCTGTGGATAGCAAAGACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGCAGCCAGTATTGCTTaGCTTTTGGGAAATGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVAASIA*LLGNAF Trigger: AAATGCATTTCCCAAAAGGCAAGCAATACTGGCTGC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGACAAGCAGCCAGTATTaGTTGCCTTTTGGGAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQTSSQY*LPFGKC Trigger: GCATTTCCCAAAAGGCAAGCAATACTGGCTGCTTGT...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGGATGGGCAAACCTGTaGTTGTATCCTCACAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVGWANL*LYPHRE Trigger: CTCTCTGTGAGGATACAACCACAGGTTTGCCCATCC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTGTCCTTTTCCAAGAATTTGATCAACGCGTGTCTGAAGGCTTTTTATTCTCTGCTCTTAATGCTCTaGCCCCTTGGGCTAGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: HLSFSKNLINACLKAFYSLLLML*PLGLAM Trigger: CATGGCTAGCCCAAGGGGCCAGAGCATTAAGAGCAG...AGAATAAAAAGCCTTCAGACACGCGTTGATCAAATTCTTGGAAAAGGACAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTAACATGAAAACAATGTaGGAAACTGCTTGCCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGNMKTM*ETACHS Trigger: GCTGTGGCAAGCAGTTTCGCACATTGTTTTCATGTT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGCTGGCTGAAACCTGGTaGAGTTTTAAAGCAAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQLAETW*SFKAKL Trigger: CAATTTTGCTTTAAAACTTCACCAGGTTTCAGCCAG...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGTTATAAACAATTTGGATTCTCTCCACTTGGGATAAAAATCTTGACTGCCAGAAATGCCAAGGAGTaGGAAGCCTGCAGAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ISYKQFGFSPLGIKILTARNAKE*EACREQ Trigger: CTGCTCTCTGCAGGCTTCGCACTCCTTGGCATTTCT...GGCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCAAATTGTTTATAACTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGCAGCGACTGTTGGCTTaGGATTTTAGACTCAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVQRLLA*DFRLKV Trigger: TACCTTGAGTCTAAAATCCCAAGCCAACAGTCGCTG...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTCAGAAGATCCTGAATaGTACACTCTAAGAGACCGT | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYSEDPE*YTLRDR Trigger: ACGGTCTCTTAGAGTGTAGCATTCAGGATCTTCTGA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTCCATCCAGTGCTATCTaGTTTGCAGTTATAAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGPSSAI*FAVINV Trigger: AACATTTATAACTGCAAACCAGATAGCACTGGATGG...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGTCTGCTCATTTGGCTTaGATGCTAAAAAGGTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQSAHLA*MLKRLK Trigger: TTTCAACCTTTTTAGCATCCAAGCCAAATGAGCAGA...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCACTGGCAAAGGTTTCTTaGAATAAGCAGCCATTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: AGSFLCGITLLGRIEKCSLAKVS*NKQPFR Trigger: CCGAAATGGCTGCTTATTTCAAGAAACCTTTGCCAG...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGTTATAAACAATTTGGATTCTCTCCACTTGGGATAAAAATCTTGACTGCCAACCTGAGCCAAGAATaGCAGCAGGAAGTGCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISYKQFGFSPLGIKILTANLSQE*QQEVQR Trigger: TCTTTGCACTTCCTGCTGGCATTCTTGGCTCAGGTT...GGCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCAAATTGTTTATAACTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGTTATAAACAATTTGGATTCTCTCCACTTGGGATAAAAATCTTGACTGCCTTGAGATGTTGGCACTaGCTGACCTCGTTAAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: ISYKQFGFSPLGIKILTALRCWH*LTSLNS Trigger: GCTGTTTAACGAGGTCAGCCAGTGCCAACATCTCAA...GGCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCAAATTGTTTATAACTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGCAGAAGCACACAGATTaGCATTCAAATCACATTGAT | + |
|
Preference number: 2 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVQKHTD*HSNHID Trigger: ATCAATGTGATTTGAATGTCAATCTGTGTGCTTCTG...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGTCATAAAGCAGAAATaGCTGAAATTTGAAGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYVIKQK*LKFEGV Trigger: AACACCTTCAAATTTCAGGCATTTCTGCTTTATGAC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAATTTATTTCAAATTTTaGGCTCCTCTCCTCCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AGSFLCGITLLGRIEKCSIYFKF*APLLLA Trigger: GGCAAGGAGGAGAGGAGCCCAAAATTTGAAATAAAT...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGTCATAAAGCAGAAATaGCTGAAATTTGAAGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HILIGKHSQRKGQHENNVVIKQK*LKFEGV Trigger: AACACCTTCAAATTTCAGGCATTTCTGCTTTATGAC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | CCAAGGGCTGTGTCGGCGTCTATCACTGGCTTTGGCTaGGAACTCTTGAGCCGTAGTGAGGGCCTGAAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: PRAVSASITGFG*ELLSRSEGLKR Trigger: CCGCTTCAGGCCCTCACTACGGCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGACACAGCCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | AACTCTTCTGGACTTTGGTGGGGCTGCCCTCGGCAGTaGTGTCAGTGCTCGGGGATCTCCTGTCACCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: NSSGLWWGCPRQ*CQCSGISCHLL Trigger: CAGTAGGTGACAGGAGATCCCCGAGCACTGACATCACTGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 72 bp | TGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTaGAATGTTATTGGTGGCTACCACGGAGGAGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: WGCWLGCGAYLV*NVIGGYHGGAV Trigger: GACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | GTCAGCTCCCTCCTCTTCCTCAGCCCGTATTTGGAGTaGGCCTTGTTCAGTGCCAGGCAGGTTTCTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSSLLFLSPYLE*ALFSARQVSLA Trigger: AGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTCACTCCAAATACGGGCTGAGGAAGAGGAGGGAGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 72 bp | GGTCTGTTCACATTCAAAAGGCGGGATCTGAAAGGATaGCAGAGTGAGGGCGGAGGCAGAGCCTTTCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLFTFKRRDLKG*QSEGGGRAFPE Trigger: CTCCGGAAAGGCTCTGCCTCCGCCCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGAATGTGAACAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | TGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTaGGTTGAGAGCCTTCCTTGCTTCCATCAACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: CSGTAFCWGRGW*VESLPCFHQPL Trigger: AAGTGGTTGATGGAAGCAAGGAAGGCTCTCAACCCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTaGGGGAGAGGCTGGTGGGTTGAGAGCCTTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KSKGDCSGTAFC*GRGWWVESLPC Trigger: GCAAGGAAGGCTCTCAACCCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | CCACCAACCCTGTGGTTTGCGGAGGGCAGATGGGTTTaGGCTGAGAAAGCACAGGGTTATTCAGTGTGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PPTLWFAEGRWV*AEKAQGYSVCS Trigger: CGAGCACACTGAATAACCCTGTGCTTTCTCAGCCCAAACCCATCTGCCCTCCGCAAACCACAGGGTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGGCGGTGGGGTGCCGTCAAAAGTATCTGTTTCTGTCTCTTCGGCACCGACTGCTGGGGTCATCTGTaGTCTCGTGTTCTGCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RRRWGAVKSICFCLFGTDCWGHL*SRVLLL Trigger: TAACAGCAGAACACGAGACAACAGATGACCCCAGCA...GTCGGTGCCGAAGAGACAGAAACAGATACTTTTGACGGCACCCCACCGCCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 72 bp | TTGCTGCCAGTGGGGTTCAACCTGAGACAGTATCAGTaGTGTCTGGAAGCTGTCAGCTCCCTCCTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLPVGFNLRQYQ*CLEAVSSLLFL Trigger: GAGGAAGAGGAGGGAGCTGACAGCTTCCAGACAGCACTGATACTGTCTCAGGTTGAACCCCACTGGCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | CTGTCACCTACTGATGCTTGTCTGCTCTTAATGCTCTaGCCCCTTGGGCTAGCCATGCGCACTCGCTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSPTDACLLLML*PLGLAMRTRSL Trigger: TAAGGAGCGAGTGCGCATGGCTAGCCCAAGGGGCCAGAGCATTAAGAGCAGACAAGCATCAGTAGGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | ATATCCAGCAGGCAGTCCAGCTTGGATTCGATGGACTaGACCTGTTTCTCAACCTTCACAACCCGGGCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ISSRQSSLDSMD*TCFSTFTTRAS Trigger: GCTCGCCCGGGTTGTGAAGGTTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCTGGATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | GTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTaGTTTGCAATGTTATTGGTGGCTACCACGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVGAAGLGAALI*FAMLLVATTEE Trigger: CTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAATGCCAAGGGCTGTGTCGGCGTCTATCACTGGCTTTGGCTGGGAACTCACACACTGGATGAGGTaGGCAGCTGGGTTCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSMPRAVSASITGFGWELTHWMR*AAGFLL Trigger: AAGAAGGAACCCAGCTGCCAACCTCATCCAGTGTGT...GAGTTCCCAGCCAAAGCCAGTGATAGACGCCGACACAGCCCTTGGCATTGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | AGTGATGTCAGTGCTCGGGGATCTCCTGTCACCTACTaGTGCTTGTCTGCTCTTAATGCTCTGGCCCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SDVSARGSPVTY*CLSALNALAPW Trigger: CCAAGGGGCCAGAGCATTAAGAGCAGACAAGCATCAGTAGGTGACAGGAGATCCCCGAGCACTGACATCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 72 bp | GGACCTGTTTCTCAACCTTCACAACCCGGGCGAGCATaGTGGGGTCATCTGTTGTCTCGTGTTCTGCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GPVSQPSQPGRA*WGHLLSRVLLL Trigger: TAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTGTGAAGGTTGAGAAACAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTGGAGTCTTTCCAAGTaGTTTTCCCCCAACCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCWSLSK*FSPNLK Trigger: CTTGAGGTTGGGGGAAAACAACTTGGAAAGACTCCA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTGGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTTTCTCTCGGCTCTTCAACTCTTCTGGACTTaGGTGGGGCTGCCCTCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HAGVICCLVFCCYFLSALQLFWT*VGLPSA Trigger: TGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTTG...AAGAGCCGAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGACTCGCTGCCTGAAAACTGGGTACCTGGGTAGCTaGGCTGTGCATAGTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WDKNLDCLESRLTRCLKTGYLGS*AVHSRA Trigger: AGCCCTACTATGCACAGCCAAGCTACCCAGGTACCC...AGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | CTTGAGGCCCGAGGATGCCTAAGAAGAAGGGGTCCCTaGTACATTCACAATTCTTGCTGCCAGTGGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LEARGCLRRRGP*YIHNSCCQWGS Trigger: TGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTTAGGCATCCTCGGGCCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | AGGGAACGGTCCTTGGTCAGGTTTGACTGTGCAAACTaGACACTTTCCTTGGAGGCAACAAGGCAGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RERSLVRFDCAN*TLSLEATRQVV Trigger: CACCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | GATAGATATCCAGCAGGCAGTCCAGCTTGGATTCGATaGACTGGACCTGTTTCTCAACCTTCACAACCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: DRYPAGSPAWIR*TGPVSQPSQPG Trigger: CCCGGGTTGTGAAGGTTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCTGGATATCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | GTACAGACAGAGATTTGCCCAAATCCTTGGGCACCATaGGGCGGACAGACAACAGAGTTTCTCCTCCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: VQTEICPNPWAP*GGQTTEFLLPC Trigger: ACATGGGAGGAGAAACTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGATGCTTGTAGAGAGGTaGACCATTTTCAGGGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWMLVER*TIFRVD Trigger: GTCAACCCTGAAAATGGTCAACCTCTCTACAAGCAT...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCAGAGGTTCTGGCCTGGACAAGTGCTTGATGGCCGAGAGAGGAGGAGGGGTGACCAGCAGAGTATaGTTCAATGACATCTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ESRGSGLDKCLMAERGGGVTSRV*FNDIFY Trigger: GTAAAAGATGTCATTGAACAATACTCTGCTGGTCAC...CCCTCCTCCTCTCTCGGCCATCAAGCACTTGTCCAGGCCAGAACCTCTGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTTGACTCGCTGCCTGAAAACTGGAGGAGCCGTCATTTaGACTCATGGGTACCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WDKNLDCLESRLTRCLKTGGAVI*THGYLG Trigger: ACCCAGGTACCCATGAGTCAAAATGACGGCTCCTCC...AGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTTCCGGAGGACCTGTaGATAGATATCCAGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CKVVGAAGLGAALIWFAMFPEDL*IDIQQA Trigger: TGCCTGCTGGATATCTATCAACAGGTCCTCCGGAAA...CATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCTGGCCTGGACAAGTGCTTGATGGCCGAGAGAGGAGGAGGGATCTGTAAACGGCGCTTATTTGGTTaGCAATGTTATTGGTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSGLDKCLMAERGGGICKRRLFG*QCYWWL Trigger: TAGCCACCAATAACATTGCAAACCAAATAAGCGCCG...TTTACAGATCCCTCCTCCTCTCTCGGCCATCAAGCACTTGTCCAGGCCAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | CTGGCCTGGAACACACCTTGTAGACCAGACTGGCCTTaGACACACAAAGATCCACCCAACTTTGCCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LAWNTPCRPDWP*THKDPPNFASQ Trigger: TTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTTCAAGGCCAGTCTGGTCTACAAGGTGTGTTCCAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | CAGCTTTCAGCTATGTTAGATGAACTGTACTGTGCTTaGGGCCCGAGGATGCCTAAGAAGAAGGGGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLSAMLDELYCA*GPRMPKKKGSL Trigger: CAGGGACCCCTTCTTCTTAGGCATCCTCGGGCCTCAAGCACAGTACAGTTCATCTAACATAGCTGAAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | CATAATTCTGATTGCTCGGATGACGGTTTTAAGTGGTaGGGTGAGGTCCTCCACAGAGACGTCACACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HNSDCSDDGFKW*GEVLHRDVTLA Trigger: TGCCAGTGTGACGTCTCTGTGGAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | CCTGTTTCTCAACCTTCACAACCCGGGCGAGCATGCTaGGGTCATCTGTTGTCTCGTGTTCTGCTGTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: PVSQPSQPGRAC*GHLLSRVLLLF Trigger: AAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTGTGAAGGTTGAGAAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | TGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGTaGCTACCACGGAGGAGCCGTCATTTTGACTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: WVRRLFGLQCYW*LPRRSRHFDSW Trigger: CCATGAGTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | GCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTaGTGGCTACCACGGAGGAGCCGTCATTTTGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: AWVRRLFGLQCY*WLPRRSRHFDS Trigger: TGAGTCAAAATGACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | GAGGAGGGATCTGTAAAGTTGTTGGGGCTGCTGGCTTaGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: EEGSVKLLGLLA*VRRLFGLQCYW Trigger: CCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACTTTACAGATCCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGTTCTGCTCATTTGGCTaGGATGCTAAAAAGGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWFCSFG*DAKKVE Trigger: TTCAACCTTTTTAGCATCCAAGCCAAATGAGCAGAA...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | TCCACTAAATGGGAATTGTTAGTCACCCTGGCCATTTaGGGGGACAGGATGGGCAAACCTGTGGTTGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: STKWELLVTLAI*GDRMGKPVVVS Trigger: GGATACAACCACAGGTTTGCCCATCCTGTCCCCTCAAATGGCCAGGGTGACTAACAATTCCCATTTAGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | ACTGAACACTTTCCTTGGAGGCAACAAGGCAGGTGGTaGCATCAGAAATACTCTCTTGTAAGCCGGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TEHFPWRQQGRW*HQKYSLVSRWG Trigger: ACCCCACCGGCTTACAAGAGAGTATTTCTGATGTCACCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 72 bp | AGACTGGCCTTGAACACACAAAGATCCACCCAACTTTaGCTCTCAAATCCTGGGATTAGAGGTGTGCGACCA | + |
|
Preference number: 3 (lower is better) Translates to: RLALNTQRSTQL*LSNPGIRGVRP Trigger: TGGTCGCACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTTCAAGGCCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | CTTCATAATTCTGATTGCTCGGATGACGGTTTTAAGTaGTGGGGTGAGGTCCTCCACAGAGACGTCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LHNSDCSDDGFK*WGEVLHRDVTL Trigger: CAGTGTGACGTCTCTGTGGAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | GGACCTGTTGATAGATATCCAGCAGGCAGTCCAGCTTaGATTCGATGGACTGGACCTGTTTCTCAACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPVDRYPAGSPA*IRWTGPVSQPS Trigger: TGAAGGTTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCTGGATATCTATCAACAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | TCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTaGGCACCATGGGGCGGACAGACAACAGAGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGFVQTEICPNP*APWGGQTTEFL Trigger: GAGAAACTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGAAGAGAGAATTGGTTaGCTTGAGGGTGGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVEERIG*LEGGGW Trigger: CCAGCCTCCACCCTCAAGCAAACCAATTCTCTCTTC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTGGTGTTAGGATGAACTGCAGGCCTCTTGAGATGTTGGCACTGGCTGACGCTATCCACAGGACTTaGATAGTCAGAGGTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFGVRMNCRPLEMLALADAIHRT*IVRGLF Trigger: GAACAGACCTCTGACTATCAAAGTCCTGTGGATAGC...GTCAGCCAGTGCCAACATCTCAAGAGGCCTGCAGTTCATCCTAACACCAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | TACATTCACAATTCTTGCTGCCAGTGGGGTTCAACCTaGGACAGTATCAGTGCTGTCTGGAAGCTGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YIHNSCCQWGST*DSISAVWKLSA Trigger: AGCTGACAGCTTCCAGACAGCACTGATACTGTCTCAGGTTGAACCCCACTGGCAGCAAGAATTGTGAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | GAAACTTTTCCTCAGGGAACGGTCCTTGGTCAGGTTTaGCTGTGCAAACTGAACACTTTCCTTGGAGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ETFPQGTVLGQV*LCKLNTFLGGN Trigger: GTTGCCTCCAAGGAAAGTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 72 bp | AACAGCCGCTGTTTTGTGCTGAGCCAGACAGGTCTTTaGTATCCACAGGACTTTGATAGTCAGAGGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSRCFVLSQTGL*YPQDFDSQRSV Trigger: AACAGACCTCTGACTATCAAAGTCCTGTGGATAGCAAAGACCTGTCTGGCTCAGCACAAAACAGCGGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CCA 72 bp | CTCCCATGTCGAAACTTTTCCTCAGGGAACGGTCCTTaGTCAGGTTTGACTGTGCAAACTGAACACTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPCRNFSSGNGP*SGLTVQTEHFP Trigger: AGGAAAGTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAGTTTCGACATGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACAAGATCCACCCAACTTaGCCTCTCAAATCCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNKIHPT*PLKSWD Trigger: ATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTT...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACAGGTTTCTCTGGCTTTaGCTCAATGGTGAGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNRFLWL*LNGEGC Trigger: ACATCCCTCACCATTGAGCAAAAGCCAGAGAAACCT...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGCAGAGGAAGAGAGAATaGGTTTGCTTGAGGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQQRKRE*VCLRVE Trigger: CTCCACCCTCAAGCAAACCAATTCTCTCTTCCTCTG...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAATTCTGATTGCTCGGATGACGGTTTTAAGTGGTGGGGTGAGGTCCTCCACGATGTGGCTTCCAGGTaGCAATGGAAACAGATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HNSDCSDDGFKWWGEVLHDVASR*QWKQIF Trigger: AAAAATCTGTTTCCATTGCAACCTGGAAGCCACATC...GTGGAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR GCA 72 bp | ATTTGGATTCTCTCCACTTGGGATAAAAATCTTGACTaGCTCGAGAGCCGCTTGACTCGCTGCCTGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: IWILSTWDKNLD*LESRLTRCLKT Trigger: AGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGAGCAGCCAGTATTGCTaGCCTTTTGGGAAATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVSSQYC*PFGKCI Trigger: AATGCATTTCCCAAAAGGCAAGCAATACTGGCTGCT...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTAAGATCCACCCAACTTaGCCTCTCAAATCCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGKIHPT*PLKSWD Trigger: ATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 72 bp | GTAAAGGACAACATGAAAACAATGTGCGAAACTGCTTaGCACAGCGCTAAGTCACCAGAAGCACACAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: VKDNMKTMCETA*HSAKSPEAHRL Trigger: CAATCTGTGTGCTTCTGGTGACTTAGCGCTGTGGCAAGCAGTTTCGCACATTGTTTTCATGTTGTCCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR GCA 72 bp | AACATTCGCAGCGTAAAGGACAACATGAAAACAATGTaGGAAACTGCTTGCCACAGCGCTAAGTCACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NIRSVKDNMKTM*ETACHSAKSPE Trigger: TTCTGGTGACTTAGCGCTGTGGCAAGCAGTTTCGCACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGAGAGATTCTGCTCATTaGGCTTGGATGCTAAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVRDSAH*AWMLKR Trigger: CCTTTTTAGCATCCAAGCCAAATGAGCAGAATCTCT...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | GATAACAGGCTTATAAATGGCCTTTCGCGTTCTTCCTaGCTCTTGTGCGATTTCAACTCTATAGACGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DNRLINGLSRSS*LLCDFNSIDGL Trigger: AAGCCCGTCTATAGAGTTGAAATCGCACAAGAGTCAGGAAGAACGCGAAAGGCCATTTATAAGCCTGTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | ATTGGGTTCTGGGGAATTAGCATCTGTGATAGCATCTaGCTGGATGATCTGTTTGCCTGGGTTTCATCATTC | + |
|
Preference number: 3 (lower is better) Translates to: IGFWGISICDSI*LDDLFAWVSSF Trigger: GAATGATGAAACCCAGGCAAACAGATCATCCAGTCAGATGCTATCACAGATGCTAATTCCCCAGAACCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTATTACAGGTATGGGGTaGAATTCTAACAAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGITGMG*NSNKQP Trigger: TGGCTGCTTGTTAGAATTCAACCCCATACCTGTAAT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CCA 72 bp | GGTTCTGGGGAATTAGCATCTGTGATAGCATCTGACTaGATGATCTGTTTGCCTGGGTTTCATCATTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GSGELASVIASD*MICLPGFHHSL Trigger: TAAAGAATGATGAAACCCAGGCAAACAGATCATCCAGTCAGATGCTATCACAGATGCTAATTCCCCAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGTCCACTAAATGGGAATaGTTAGTCACCCTGGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVSTKWE*LVTLAI Trigger: AATGGCCAGGGTGACTAACAATTCCCATTTAGTGGA...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTTATTTATTTCAAATTTaGGGCTCCTCTCCTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGYLFQI*GSSPPC Trigger: GCAAGGAGGAGAGGAGCCCAAAATTTGAAATAAATA...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGAGCAGCCAGTATTGCTaGCCTTTTGGGAAATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVSSQYC*PFGKCI Trigger: AATGCATTTCCCAAAAGGCAAGCAATACTGGCTGCT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGTTCTGCTCATTTGGCTaGGATGCTAAAAAGGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQFCSFG*DAKKVE Trigger: TTCAACCTTTTTAGCATCCAAGCCAAATGAGCAGAA...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | GGGCGTAATGTTTCCTTAAACTTCCGCTTTGCAACATaGAACTTCATAATTCTGATTGCTCGGATGACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GRNVSLNFRFAT*NFIILIARMTV Trigger: AACCGTCATCCGAGCAATCAGAATTATGAAGTTTCATGTTGCAAAGCGGAAGTTTAAGGAAACATTACGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | TGCCTGAAAACTGTAAGTTCAGTTCTTCTGTCGACCTaGTCAGGTTTTGTACAGACAGAGATTTGCCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CLKTVSSVLLST*SGFVQTEICPN Trigger: ATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAAGAACTGAACTTACAGTTTTCAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCATCCACTAAATGGGAATaGTTAGTCACCCTGGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: AGSFLCGITLLGRIEKCSSTKWE*LVTLAI Trigger: AATGGCCAGGGTGACTAACAATTCCCATTTAGTGGA...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | AACTCTATAGACGGGCTTCCAGAGTACTTCATGCAGTaGTATGTATGGCTAAAAGAACAGCTATGCTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSIDGLPEYFMQ*YVWLKEQLCLE Trigger: TTCTAAGCATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCGTCTATAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR TCA 72 bp | GTGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCTaGCGTCATTTGTCCTTTTCCAAGAATTTGATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VFCCYFLSALLI*RHLSFSKNLIN Trigger: GTTGATCAAATTCTTGGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGAGAGAAAATAACAGCAGAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR TCA 72 bp | TCTGTTTGCAAAATGAGAAGAATAGCTCGAAAGGCTTaGGGAGCATTCCAATTTCAATGGAGTGTAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: SVCKMRRIARKA*GAFQFQWSVEF Trigger: AAATTCTACACTCCATTGAAATTGGAATGCTCCTCAAGCCTTTCGAGCTATTCTTCTCATTTTGCAAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGCAGGCCGTCGCCCCTaGCGGCCGCCGAGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWAGRRP*RPPSSA Trigger: TGCTGAACTCGGCGGCCGCCAGGGGCGACGGCCTGC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAGGGCTGTGTCGGCGTCTATCACTGGCTTTGGCTGGGAACTCTTGAGCGCAGGCCGTCGCCCCTaGCGGCCGCCGAGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MPRAVSASITGFGWELLSAGRRP*RPPSSA Trigger: TGCTGAACTCGGCGGCCGCCAGGGGCGACGGCCTGC...GCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGACACAGCCCTTGGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGACTCCACATCCTTCATaGCGCTGCCCGGGCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWTPHPS*RCPGAP Trigger: GGGGGCGCCCGGGCAGCGGCATGAAGGATGTGGAGT...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTACTCCACATCCTTCATaGCGCTGCCCGGGCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCTPHPS*RCPGAP Trigger: GGGGGCGCCCGGGCAGCGGCATGAAGGATGTGGAGT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGCACCCGCCGGTACTTaGCGTTGCGCCGACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCAPAGT*RCADSS Trigger: AGAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGGCTGCCCTCGGCAGTaGTGTCAGTGCTCGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCGCPRQ*CQCSGI Trigger: GATCCCCGAGCACTGACATCACTGCCGAGGGCAGCC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGGCTGCCCTCGGCAGTaGTGTCAGTGCTCGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWGCPRQ*CQCSGI Trigger: GATCCCCGAGCACTGACATCACTGCCGAGGGCAGCC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | GTGTCGGCGTCTATCACTGGCTTTGGCTGGGAACTCTaGAGCCGTAGTGAGGGCCTGAAGCGGGTTCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSASITGFGWEL*SRSEGLKRVRS Trigger: CGACCGAACCCGCTTCAGGCCCTCACTACGGCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTAGTTCAGCAGCACCCTaGCGCGGCCGGACTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCSSAAP*RGRTPH Trigger: ATGTGGAGTCCGGCCGCGGCAGGGTGCTGCTGAACT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGCCAGACACACTGGATaGGGTTGGCAGCTGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCARHTG*GWQLGS Trigger: GGAACCCAGCTGCCAACCTCATCCAGTGTGTCTGGC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGCCAGACACACTGGATaGGGTTGGCAGCTGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWARHTG*GWQLGS Trigger: GGAACCCAGCTGCCAACCTCATCCAGTGTGTCTGGC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | ATCATACACATCATCAATGCCAAGGGCTGTGTCGGCGTCTATCACTGGCTTTGGACTCCACATCCTTCATaGCGCTGCCCGGGCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IIHIINAKGCVGVYHWLWTPHPS*RCPGAP Trigger: GGGGGCGCCCGGGCAGCGGCATGAAGGATGTGGAGT...CCAAAGCCAGTGATAGACGCCGACACAGCCCTTGGCATTGATGATGTGTATGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | CATAATTCTGATTGCTCGGATGACGGTTTTAAGTGGTGGGGTGAGGTCCTCCACTTCGGGCCCCCTGCTTaGCCCGGCGGCTCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNSDCSDDGFKWWGEVLHFGPPA*PGGSLS Trigger: TGAGAGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAA...GTGGAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR CCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGCAGGCCGTCGCCCCTaGCGGCCGCCGAGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVAGRRP*RPPSSA Trigger: TGCTGAACTCGGCGGCCGCCAGGGGCGACGGCCTGC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGCTACGCCAGACACACTaGATGAGGTTGGCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWLRQTH*MRLAAG Trigger: CCCAGCTGCCAACCTCATCCAGTGTGTCTGGCGTAG...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACCTCATTCGGGCCCCCTaGTTGCCCCGGCGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNLIRAP*LPRRLS Trigger: AGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAATGAG...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTTCCTCAGGGAACGGTCCTTGGTCAGGTTTGACTGTGCAAACTGAACACCTCATTCGGGCCCCCTaGTTGCCCCGGCGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSGNGPWSGLTVQTEHLIRAP*LPRRLS Trigger: AGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAATGAG...GTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAGGAAAAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 72 bp | TGGCCATTTGAGGGGACAGGATGGGCAAACCTGTGGTaGTATCCTCACAGAGAGACCAGCCCCGTTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WPFEGTGWANLW*YPHRETSPVAQ Trigger: CTGTGCAACGGGGCTGGTCTCTCTGTGAGGATACAACCACAGGTTTGCCCATCCTGTCCCCTCAAATGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | AGTGAGGGCGGAGGCAGAGCCTTTCCGGAGGACCTGTaGATAGATATCCAGCAGGCAGTCCAGCTTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SEGGGRAFPEDL*IDIQQAVQLGF Trigger: GAATCCAAGCTGGACTGCCTGCTGGATATCTATCAACAGGTCCTCCGGAAAGGCTCTGCCTCCGCCCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 72 bp | TTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTaGCAATGTTATTGGTGGCTACCACGGAGGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLLAWVRRLFG*QCYWWLPRRSR Trigger: ACGGCTCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGTGGGTAGCTTGGCTGTaGATAGTAGGGCTAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWWVAWL*IVGLSA Trigger: TGCGCTTAGCCCTACTATGCACAGCCAAGCTACCCA...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGGTACCTGGGTAGCTTaGCTGTGCATAGTAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCGTWVA*LCIVGL Trigger: TAGCCCTACTATGCACAGCCAAGCTACCCAGGTACC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGCAGCTTCTGACTGCTTaGTGCCTCCCCTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWQLLTA*CLPLFF Trigger: AAAGAACAAGGGGAGGCATCAAGCAGTCAGAAGCTG...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029667.13 |
||
| CDS-3UTR GCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGTTCGGGCCCCCTGCTTaGCCCGGCGGCTCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMFGPPA*PGGSLS Trigger: TGAGAGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAA...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGTCAGGGAACGGTCCTTaGTCAGGTTTGACTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWSGNGP*SGLTVQ Trigger: TTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGA...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | CCTTCACAACCCGGGCGAGCATGCTGGGGTCATCTGTaGTCTCGTGTTCTGCTGTTATTTTCTCTCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSQPGRACWGHL*SRVLLLFSLGS Trigger: AGAGCCGAGAGAAAATAACAGCAGAACACGAGACAACAGATGACCCCAGCATGCTCGCCCGGGTTGTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| 3UTR CAA 72 bp | AGTTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTaGGTTTGCAATGTTATTGGTGGCTACCACGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCWGCWLGCGAY*VCNVIGGYHGG Trigger: TCCTCCGTGGTAGCCACCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGCCGACAGCTCTGGCTaGTGGTGTAGGAGAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVADSSG*WCRRAA Trigger: AGCCGCTCTCCTACACCAGCAGCCAGAGCTGTCGGC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGTCGACCTGATCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTGGGGCCGACAGCTCTGGCTaGTGGTGTAGGAGAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FCRPDQVLYRQRFAQILGADSSG*WCRRAA Trigger: AGCCGCTCTCCTACACCAGCAGCCAGAGCTGTCGGC...CCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGTGCAAAGAAAGAAATaGCAAGGAGTGCGAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCVQRKK*QGVRSL Trigger: CAGGCTTCGCACTCCTTGGCATTTCTTTCTTTGCAC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | ATTGCTGTTCTATATGAGCTCCACCAACCCTGTGGTTaGCGGAGGGCAGATGGGTTTGGGCTGAGAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IAVLYELHQPCG*RRADGFGLRKH Trigger: GTGCTTTCTCAGCCCAAACCCATCTGCCCTCCGCAAACCACAGGGTTGGTGGAGCTCATATAGAACAGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | TCTGTCGACCTGATCAGGTTTTGTACAGACAGAGATTaGCCCAAATCCTTGGGCACCATGGGGCGGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVDLIRFCTDRD*PKSLGTMGRTD Trigger: GTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTCGGCTCTTCTTATCTaGCGTCATTTGTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCSALLI*RHLSFS Trigger: GGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTTCGGGCCCCCTGCTTaGCCCGGCGGCTCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYFGPPA*PGGSLS Trigger: TGAGAGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTGCCGACAGCTCTGGCTaGTGGTGTAGGAGAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGADSSG*WCRRAA Trigger: AGCCGCTCTCCTACACCAGCAGCCAGAGCTGTCGGC...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGGCTGCTGGCTTGGGTaGGGCGCTTATTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNGCWLG*GAYLVC Trigger: GCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGAATGCTCTGGCCCCTTaGGCTAGCCATGCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVNALAP*ASHAHS Trigger: CGAGTGCGCATGGCTAGCCCAAGGGGCCAGAGCATT...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGCACCCGCCGGTACTTaGCGTTGCGCCGACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVAPAGT*RCADSS Trigger: AGAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTAGAGACAACTGCTATTaGAGCGATGAGAACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCRDNCY*SDENNG Trigger: ACCATTGTTCTCATCGCTTCAATAGCAGTTGTCTCT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGGAACCGGAGACTTCTaGGCGCTGACGTGGCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVGTGDF*ALTWRK Trigger: TTTTCGCCACGTCAGCGCTCAGAAGTCTCCGGTTCC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGGAAAGGATGCCAGAGTaGGGGCGGAGGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMERMPE*GRRQSL Trigger: AAGGCTCTGCCTCCGCCCTCACTCTGGCATCCTTTC...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACAAGGAGTGCGAAGCCTaGAGAGAGCAGTCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNKECEA*REQSSQ Trigger: CTGGGAAGACTGCTCTCTGCAGGCTTCGCACTCCTT...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGCGGGATCTGAAAGGATaGCAGAGTGAGGGCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQRDLKG*QSEGGG Trigger: GCCTCCGCCCTCACTCTGGCATCCTTTCAGATCCCG...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTCGGGATCTGAAAGGATaGCAGAGTGAGGGCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGRDLKG*QSEGGG Trigger: GCCTCCGCCCTCACTCTGGCATCCTTTCAGATCCCG...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGAACTCTTCTGGACTTTaGTGGGGCTGCCCTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVNSSGL*WGCPRQ Trigger: CTGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTT...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCCCGGGCGAGCATGCTaGGGTCATCTGTTGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMPGRAC*GHLLSR Trigger: ACGAGACAACAGATGACCCCAGCATGCTCGCCCGGG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGCCCGGGCGAGCATGCTaGGGTCATCTGTTGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQPGRAC*GHLLSR Trigger: ACGAGACAACAGATGACCCCAGCATGCTCGCCCGGG...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | GAGCCTTGTTCAGTGCCAGGCAGGTTTCTCTGGCTTTaGCTCAATGGTGAGGGATGTGTTGTGGGTATACAC | + |
|
Preference number: 4 (lower is better) Translates to: EPCSVPGRFLWL*LNGEGCVVGIH Trigger: GTGTATACCCACAACACATCCCTCACCATTGAGCAAAAGCCAGAGAAACCTGCCTGGCACTGAACAAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | GGAGCCGTCATTTTGACTCATGGGTACCTGGGTAGCTaGGCTGTGCATAGTAGGGCTAAGCGCATAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAVILTHGYLGS*AVHSRAKRIES Trigger: ACTTTCTATGCGCTTAGCCCTACTATGCACAGCCAAGCTACCCAGGTACCCATGAGTCAAAATGACGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCATTTGTCCTTTTCCAAGAATTTGATCAACGCGTGTCTGAAGGCTTTTTAGCACCCGCCGGTACTTaGCGTTGCGCCGACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSFVLFQEFDQRVSEGFLAPAGT*RCADSS Trigger: AGAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGC...TAAAAAGCCTTCAGACACGCGTTGATCAAATTCTTGGAAAAGGACAAATGACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGCGAAAATATTACCCTaGGTTTTTGCAGAGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWAKILP*VFAETT Trigger: AGTTGTCTCTGCAAAAACTCAGGGTAATATTTTCGC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGAAGCCAATTTTGTATaGTCAGGGATGGTAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWEANFV*SGMVEN Trigger: GTTTTCTACCATCCCTGAGCATACAAAATTGGCTTC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTGGGTAGCTTGGCTGTaGATAGTAGGGCTAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNWVAWL*IVGLSA Trigger: TGCGCTTAGCCCTACTATGCACAGCCAAGCTACCCA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGTTGGGGCTGCTGGCTTaGGTGCGGCGCTTATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMLGLLA*VRRLFG Trigger: ACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAA...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTGGATTCTCTCCACTTaGGATAAAAATCTTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCWILST*DKNLDC Trigger: GCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | ACCTGTGGTTGTATCCTCACAGAGAGACCAGCCCCGTaGCACAGGCTGTTAAATCCACCAGTACTTCATATG | + |
|
Preference number: 4 (lower is better) Translates to: TCGCILTERPAP*HRLLNPPVLHM Trigger: CATATGAAGTACTGGTGGATTTAACAGCCTGTGCAACGGGGCTGGTCTCTCTGTGAGGATACAACCACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | TTTGGTGTTAGGATGAACTGCAGGCCTCTTGAGATGTaGGCACTGGCTGACCTCGTTAAACAGCCGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGVRMNCRPLEM*ALADLVKQPLF Trigger: AAACAGCGGCTGTTTAACGAGGTCAGCCAGTGCCAACATCTCAAGAGGCCTGCAGTTCATCCTAACACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTCTGCTATTGAAGCGATaGGAACAATGGTATCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCLLLKR*EQWYLL Trigger: TAATAGATACCATTGTTCTCATCGCTTCAATAGCAG...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGAGCGGGTTCGGTCGTTaGAGCTCCAACTCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQSGFGR*SSNSSG Trigger: TCCAGAAGAGTTGGAGCTTCAACGACCGAACCCGCT...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGCTCATTCGGGCCCCCTaGTTGCCCCGGCGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVLIRAP*LPRRLS Trigger: AGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAATGAG...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGAAGGAGTGCGAAGCCTaGAGAGAGCAGTCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMKECEA*REQSSQ Trigger: CTGGGAAGACTGCTCTCTGCAGGCTTCGCACTCCTT...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGATCTATTACACAGAATaGTTTTCGAGCAAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWIYYTE*FSSKPQ Trigger: CTGAGGTTTGCTCGAAAACCATTCTGTGTAATAGAT...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCTGCTCTTAATGCTCTaGCCCCTTGGGCTAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMLLLML*PLGLAM Trigger: CATGGCTAGCCCAAGGGGCCAGAGCATTAAGAGCAG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTCTGCTCTTAATGCTCTaGCCCCTTGGGCTAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGLLLML*PLGLAM Trigger: CATGGCTAGCCCAAGGGGCCAGAGCATTAAGAGCAG...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTGCAGGCAGTCCAGCTTaGATTCGATGGACTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGAGSPA*IRWTGP Trigger: AGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGC...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTCTCTTGTAAGCCGGTaGGGTTTGAGAGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNSLVSR*GLRAEV Trigger: AACCTCTGCTCTCAAACCCCACCGGCTTACAAGAGA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTAATCCTTGGGCACCATaGGGCGGACAGACAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGNPWAP*GGQTTE Trigger: CTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGATTTGCCCAAATCCTTaGGCACCATGGGGCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMICPNP*APWGGQ Trigger: CTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAAT...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | CCTAAGAAGAAGGGGTCCCTGATACATTCACAATTCTaGCTGCCAGTGGGGTTCAACCTGAGACAGTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKKKGSLIHSQF*LPVGFNLRQYQ Trigger: CTGATACTGTCTCAGGTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | ATCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTaGGGCACCATGGGGCGGACAGACAACAGAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRFCTDRDLPKS*GTMGRTDNRVS Trigger: AGAAACTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR TCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGAGACTTCTGAGCGCTaGCGTGGCGAAAATATTACC | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVETSER*RGENIT Trigger: GGTAATATTTTCGCCACGTCAGCGCTCAGAAGTCTC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGTCAAAAGGCGGGATCTaGAAGGATGCCAGAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQSKGGI*KDARVR Trigger: CCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGA...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGTCAAAAGGCGGGATCTaGAAGGATGCCAGAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMSKGGI*KDARVR Trigger: CCTCACTCTGGCATCCTTTCAGATCCCGCCTTTTGA...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGTTAAAGCTCAGCTTCTaGCTCTGCTTCCGTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVLKLSF*LCFREV Trigger: CACCTCACGGAAGCAGAGTCAGAAGCTGAGCTTTAA...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAAGTTCAGCAGCACCCTaGCGCGGCCGGACTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSSSAAP*RGRTPH Trigger: ATGTGGAGTCCGGCCGCGGCAGGGTGCTGCTGAACT...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGAGAAATGCCAAGGAGTaGGAAGCCTGCAGAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQRNAKE*EACREQ Trigger: CTGCTCTCTGCAGGCTTCGCACTCCTTGGCATTTCT...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTGCTTCTGGCGGTGCTaGTCCTGTACTTTTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNCFWRC*SCTFNA Trigger: TGCATTAAAAGTACAGGAGCAGCACCGCCAGAAGCA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGCATACACATCATCAATaGCAAGGGCTGTGTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVHTHHQ*QGLCRR Trigger: ACGCCGACACAGCCCTTGGCATTGATGATGTGTATG...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGGCTGCTGGCTTGGGTaGGGCGCTTATTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYGCWLG*GAYLVC Trigger: GCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGTACAGACAGAGATTTaGCCAAATCCTTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNVQTEI*PNPWAP Trigger: TGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTAC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGCTACGCCAGACACACTaGATGAGGTTGGCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVLRQTH*MRLAAG Trigger: CCCAGCTGCCAACCTCATCCAGTGTGTCTGGCGTAG...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATAACTCTTCTGGACTTTaGTGGGGCTGCCCTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYNSSGL*WGCPRQ Trigger: CTGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTT...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGGTCGGCGTCTATCACTaGCTTTGGCTGGGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMVGVYH*LWLGTL Trigger: AAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGAC...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGACGGTTTTAAGTGGTaGGGTGAGGTCCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQDGFKW*GEVLHR Trigger: TCTGTGGAGGACCTCACCCCACCACTTAAAACCGTC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTGACGGTTTTAAGTGGTaGGGTGAGGTCCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGDGFKW*GEVLHR Trigger: TCTGTGGAGGACCTCACCCCACCACTTAAAACCGTC...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACCCAGCTTGGATTCGATaGACTGGACCTGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNPAWIR*TGPVSQ Trigger: TTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGG...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTTGAGATGTTGGCACTaGCTGACCTCGTTAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNLRCWH*LTSLNS Trigger: GCTGTTTAACGAGGTCAGCCAGTGCCAACATCTCAA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAGAAAGGATGCCAGAGTaGGGGCGGAGGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSERMPE*GRRQSL Trigger: AAGGCTCTGCCTCCGCCCTCACTCTGGCATCCTTTC...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGTCTTACAAATGTTCTaGGATGACCGTGACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNVLQMF*DDRDLP Trigger: TGGAAGGTCACGGTCATCTCAGAACATTTGTAAGAC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGAACCTGAGCCAAGAATaGCAGCAGGAAGTGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVNLSQE*QQEVQR Trigger: TCTTTGCACTTCCTGCTGGCATTCTTGGCTCAGGTT...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCATACACATCATCAATaGCAAGGGCTGTGTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMHTHHQ*QGLCRR Trigger: ACGCCGACACAGCCCTTGGCATTGATGATGTGTATG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCAAGGCCTTCAGATGTaGCTTCCAGGTTGCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMQGLQM*LPGCNG Trigger: TCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTACTGAACACTTTCCTTaGAGGCAACAAGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGTEHFP*RQQGRW Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | CTTCGGTTCCCCGTCTCCATGATTACAGGTATGGGGTaGAATTCTAACAAGCAGCCAGTATTGCTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRFPVSMITGMG*NSNKQPVLLAF Trigger: AAAGGCAAGCAATACTGGCTGCTTGTTAGAATTCAACCCCATACCTGTAATCATGGAGACGGGGAACCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGAACCTGAGCCAAGAATaGCAGCAGGAAGTGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMNLSQE*QQEVQR Trigger: TCTTTGCACTTCCTGCTGGCATTCTTGGCTCAGGTT...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGGTGTTAGGATGAACTaGAGGCCTCTTGAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQGVRMN*RPLEML Trigger: CAACATCTCAAGAGGCCTGCAGTTCATCCTAACACC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGAATGCTCTGGCCCCTTaGGCTAGCCATGCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVNALAP*ASHAHS Trigger: CGAGTGCGCATGGCTAGCCCAAGGGGCCAGAGCATT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGTCTATCACTGGCTTTaGCTGGGAACTCTTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVVYHWL*LGTLEP Trigger: CGGCTCAAGAGTTCCCAGCCAAAGCCAGTGATAGAC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGTCGGCGTCTATCACTaGCTTTGGCTGGGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYVGVYH*LWLGTL Trigger: AAGAGTTCCCAGCCAAAGCCAGTGATAGACGCCGAC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGATGACGGTTTTAAGTaGTGGGGTGAGGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVDDGFK*WGEVLH Trigger: GTGGAGGACCTCACCCCACCACTTAAAACCGTCATC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGGTACCTGGGTAGCTTaGCTGTGCATAGTAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYGTWVA*LCIVGL Trigger: TAGCCCTACTATGCACAGCCAAGCTACCCAGGTACC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGGTGCGGCGCTTATTTaGTTTGCAATGTTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVGAALI*FAMLLV Trigger: CACCAATAACATTGCAAACCAAATAAGCGCCGCACC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCATTGGGGCTGCTGGCTTaGGTGCGGCGCTTATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSLGLLA*VRRLFG Trigger: ACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAA...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | ACTTGGGATAAAAATCTTGACTGCCTCGAGAGCCGCTaGACTCGCTGCCTGAAAACTGTAAGTTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWDKNLDCLESR*TRCLKTVSSVL Trigger: AAGAACTGAACTTACAGTTTTCAGGCAGCGAGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATCCCAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGAGACTTCTGAGCGCTaGCGTGGCGAAAATATTACC | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYETSER*RGENIT Trigger: GGTAATATTTTCGCCACGTCAGCGCTCAGAAGTCTC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGGAACCGGAGACTTCTaGGCGCTGACGTGGCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVGTGDF*ALTWRK Trigger: TTTTCGCCACGTCAGCGCTCAGAAGTCTCCGGTTCC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTTCTCCTGTCACCTACTaGTGCTTGTCTGCTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGSPVTY*CLSALN Trigger: ATTAAGAGCAGACAAGCATCAGTAGGTGACAGGAGA...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGTCGGCTCTTCTTATCTaGCGTCATTTGTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMSALLI*RHLSFS Trigger: GGAAAAGGACAAATGACGTCAGATAAGAAGAGCCGA...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGAGAAAGTCTGAGCACTaGACTCATTTGGTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVRKSEH*THLVLG Trigger: TCCTAACACCAAATGAGTTCAGTGCTCAGACTTTCT...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTCAACAAGGCAGGTGGTaGCATCAGAAATACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGQQGRW*HQKYSL Trigger: AAGAGAGTATTTCTGATGTCACCACCTGCCTTGTTG...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCAACAAGGCAGGTGGTaGCATCAGAAATACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMQQGRW*HQKYSL Trigger: AAGAGAGTATTTCTGATGTCACCACCTGCCTTGTTG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGCTGACTCTGCTTCCGTaGGGTGTACACTCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVLTLLP*GVHSEE Trigger: TTCTTCAGAGTGTACACCTCACGGAAGCAGAGTCAG...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CTTCATAATTCTGATTGCTCGGATGACGGTTTTAAGTGGTGGGGTGAGGTCCTCGAAGCCAATTTTGTATaGTCAGGGATGGTAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHNSDCSDDGFKWWGEVLEANFV*SGMVEN Trigger: GTTTTCTACCATCCCTGAGCATACAAAATTGGCTTC...GAGGACCTCACCCCACCACTTAAAACCGTCATCCGAGCAATCAGAATTATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTACGACAACAGCAACCTaGAGACCAGATTCGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGTTTAT*RPDSND Trigger: ATCATTCGAATCTGGTCTGCAGGTTGCTGTTGTCGT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGGATAAAAATCTTGACTaGCTCGAGAGCCGCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMDKNLD*LESRLT Trigger: AGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATC...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGCAAGGCCTTCAGATGTaGCTTCCAGGTTGCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVQGLQM*LPGCNG Trigger: TCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTG...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGGGTGCGGCGCTTATTTaGTTTGCAATGTTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RASRVLHAVICMAKRTAMGAALI*FAMLLV Trigger: CACCAATAACATTGCAAACCAAATAAGCGCCGCACC...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTCTCTTGTAAGCCGGTaGGGTTTGAGAGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYSLVSR*GLRAEV Trigger: AACCTCTGCTCTCAAACCCCACCGGCTTACAAGAGA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATACTGAACACTTTCCTTaGAGGCAACAAGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYTEHFP*RQQGRW Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAGTGTTCAGT...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAAATCCTTGGGCACCATaGGGCGGACAGACAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSNPWAP*GGQTTE Trigger: CTCTGTTGTCTGTCCGCCCCATGGTGCCCAAGGATT...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTAGAGACAACTGCTATTaGAGCGATGAGAACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGRDNCY*SDENNG Trigger: ACCATTGTTCTCATCGCTTCAATAGCAGTTGTCTCT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGCGAAAATATTACCCTaGGTTTTTGCAGAGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVAKILP*VFAETT Trigger: AGTTGTCTCTGCAAAAACTCAGGGTAATATTTTCGC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGAGCGGGTTCGGTCGTTaGAGCTCCAACTCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVSGFGR*SSNSSG Trigger: TCCAGAAGAGTTGGAGCTTCAACGACCGAACCCGCT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTGCTTCTGGCGGTGCTaGTCCTGTACTTTTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYCFWRC*SCTFNA Trigger: TGCATTAAAAGTACAGGAGCAGCACCGCCAGAAGCA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGTGTTGTCTCGTGTTCTaGTGTTATTTTCTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQCCLVF*CYFLSA Trigger: AGCCGAGAGAAAATAACAGCAGAACACGAGACAACA...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGTACAGACAGAGATTTaGCCAAATCCTTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYVQTEI*PNPWAP Trigger: TGGTGCCCAAGGATTTGGGCAAATCTCTGTCTGTAC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACATCTATTACACAGAATaGTTTTCGAGCAAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNIYYTE*FSSKPQ Trigger: CTGAGGTTTGCTCGAAAACCATTCTGTGTAATAGAT...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGCAGGCAGTCCAGCTTaGATTCGATGGACTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVAGSPA*IRWTGP Trigger: AGGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGATTTGCCCAAATCCTTaGGCACCATGGGGCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVICPNP*APWGGQ Trigger: CTGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAAT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGTCTCCTGTCACCTACTaGTGCTTGTCTGCTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVSPVTY*CLSALN Trigger: ATTAAGAGCAGACAAGCATCAGTAGGTGACAGGAGA...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGTCTTACAAATGTTCTaGGATGACCGTGACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYVLQMF*DDRDLP Trigger: TGGAAGGTCACGGTCATCTCAGAACATTTGTAAGAC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGACAGAACTTACTGCTTaGTGCCTCCCCTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVTELTA*CLPLFF Trigger: AAAGAACAAGGGGAGGCATCAAGCAGTAAGTTCTGT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGAAGCCAATTTTGTATaGTCAGGGATGGTAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQEANFV*SGMVEN Trigger: GTTTTCTACCATCCCTGAGCATACAAAATTGGCTTC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGAGAAATGCCAAGGAGTaGGAAGCCTGCAGAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVRNAKE*EACREQ Trigger: CTGCTCTCTGCAGGCTTCGCACTCCTTGGCATTTCT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGAGATTTTTCATCAGCTaGATAACTACGCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQRFFIS*ITTPDT Trigger: TGTGTCTGGCGTAGTTATGCAGCTGATGAAAAATCT...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGCTTCCAGGTTGCAATaGAAACAGATTTTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQASRLQ*KQIFHQ Trigger: CTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCATCAGGGAACGGTCCTTaGTCAGGTTTGACTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSSGNGP*SGLTVQ Trigger: TTGCACAGTCAAACCTGACCAAGGACCGTTCCCTGA...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGTTAAAGCTCAGCTTCTaGCTGCTTGATGCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVLKLSF*LLDASP Trigger: AGGGGAGGCATCAAGCAGTCAGAAGCTGAGCTTTAA...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029667.13 |
||
| CDS-3UTR TCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATAGAAAGTCTGAGCACTaGACTCATTTGGTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYRKSEH*THLVLG Trigger: TCCTAACACCAAATGAGTTCAGTGCTCAGACTTTCT...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGTGAGGTGTACACTCTaGAGAACTTCTGCTTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYVRCTL*RTSAYY Trigger: GTAATAAGCAGAAGTTCTTCAGAGTGTACACCTCAC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTGTTGTCTCGTGTTCTaGTGTTATTTTCTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYCCLVF*CYFLSA Trigger: AGCCGAGAGAAAATAACAGCAGAACACGAGACAACA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGATCACTGGCTTTGGCTaGGAACTCTTGAGCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVITGFG*ELLSRS Trigger: ACTACGGCTCAAGAGTTCCCAGCCAAAGCCAGTGAT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCACCAGCTTGGATTCGATaGACTGGACCTGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSPAWIR*TGPVSQ Trigger: TTGAGAAACAGGTCCAGTCCATCGAATCCAAGCTGG...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGTGCAAAGAAAGAAATaGCAAGGAGTGCGAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVVQRKK*QGVRSL Trigger: CAGGCTTCGCACTCCTTGGCATTTCTTTCTTTGCAC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGAGATTTTTCATCAGCTaGATAACTACGCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVRFFIS*ITTPDT Trigger: TGTGTCTGGCGTAGTTATGCAGCTGATGAAAAATCT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGGTGTTAGGATGAACTaGAGGCCTCTTGAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVGVRMN*RPLEML Trigger: CAACATCTCAAGAGGCCTGCAGTTCATCCTAACACC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGCTTCCAGGTTGCAATaGAAACAGATTTTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVASRLQ*KQIFHQ Trigger: CTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGTTGAGATGTTGGCACTaGCTGACCTCGTTAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVLRCWH*LTSLNS Trigger: GCTGTTTAACGAGGTCAGCCAGTGCCAACATCTCAA...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTGGATTCTCTCCACTTaGGATAAAAATCTTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYWILST*DKNLDC Trigger: GCAGTCAAGATTTTTATCCCAAGTGGAGAGAATCCA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATCTGCTATTGAAGCGATaGGAACAATGGTATCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYLLLKR*EQWYLL Trigger: TAATAGATACCATTGTTCTCATCGCTTCAATAGCAG...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGACGACAACAGCAACCTaGAGACCAGATTCGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVTTTAT*RPDSND Trigger: ATCATTCGAATCTGGTCTGCAGGTTGCTGTTGTCGT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAAAATGCTTCTGGCGGTaGTGCTCCTGTACTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLCGITLLGRIEKCSKCFWR*CSCTFN Trigger: ATTAAAAGTACAGGAGCAGCACCGCCAGAAGCATTT...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGATAAAAATCTTGACTaGCTCGAGAGCCGCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVDKNLD*LESRLT Trigger: AGTCAAGCGGCTCTCGAGGCAGTCAAGATTTTTATC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| 3UTR CAA 72 bp | GTCTGTTTGCAAAATGAGAAGAATAGCTCGAAAGGCTaGAGGAGCATTCCAATTTCAATGGAGTGTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VCLQNEKNSSKG*RSIPISMECRI Trigger: AATTCTACACTCCATTGAAATTGGAATGCTCCTCAAGCCTTTCGAGCTATTCTTCTCATTTTGCAAACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGAAATGCTTCTGGCGGTaGTGCTCCTGTACTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HILIGKHSQRKGQHENNVKCFWR*CSCTFN Trigger: ATTAAAAGTACAGGAGCAGCACCGCCAGAAGCATTT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS CCA 90 bp | CGAGCGCCGCCGCGCGGGTGCCGAGCAACAGCAGGCCGTCGCCCCTaGCGGCCGCCGAGTTCAGCAGCACCCTGCCGCGGCCGGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPPRGCRATAGRRP*RPPSSAAPCRGRTP Trigger: TGGAGTCCGGCCGCGGCAGGGTGCTGCTGAACTCGGCGGCCGCCAGGGGCGACGGCCTGCTGTTGCTCGGCACCCGCGCGGCGGCGCTCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 ENSMUST00000174183.8 |
||
| CDS GCA 90 bp | TCTCTCTCAAGCCGCCGCCGCCTCCGCCGAGCGCCGCCGCGCGGGTaGCGAGCAACAGCAGGCCGTCGCCCCTGGCGGCCGCCGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSRRRLRRAPPRG*RATAGRRPWRPPSS Trigger: TGAACTCGGCGGCCGCCAGGGGCGACGGCCTGCTGTTGCTCGGCACCCGCGCGGCGGCGCTCGGCGGAGGCGGCGGCGGCTTGAGAGAGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 ENSMUST00000174183.8 |
||
| CDS GCA 90 bp | ACAGCAGGCCGTCGCCCCTGGCGGCCGCCGAGTTCAGCAGCACCCTaGCGCGGCCGGACTCCACATCCTTCATGCCGCTGCCCGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TAGRRPWRPPSSAAP*RGRTPHPSCRCPGA Trigger: GGCGCCCGGGCAGCGGCATGAAGGATGTGGAGTCCGGCCGCGGCAGGGTGCTGCTGAACTCGGCGGCCGCCAGGGGCGACGGCCTGCTGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 ENSMUST00000174183.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTATTCGGGCCCCCTGCTaGCCCCGGCGGCTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCIRAPC*PRRLSL Trigger: GAGAGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAAT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCATGCGCACTCGCTCCTTAAAGCTCAGCTTCTGATTGGTAGGGCTGCATGCACCCGCCGGTACTaGACGTTGCGCCGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASHAHSLLKAQLLIGRAACTRRY*TLRRQL Trigger: GAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGCA...TGCAGCCCTACCAATCAGAAGCTGAGCTTTAAGGAGCGAGTGCGCATGGCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGCAACTCTTCTGGACTTaGGTGGGGCTGCCCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWQLFWT*VGLPSA Trigger: TGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTTG...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCGACCTGATCAGGTTTTGTACAGACAGAGATTTGCCCAAATCCTTGGGATTCGGGCCCCCTGCTaGCCCCGGCGGCTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FCRPDQVLYRQRFAQILGIRAPC*PRRLSL Trigger: GAGAGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAAT...CCCAAGGATTTGGGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCGACAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGGAGGAGCCGTCATTTaGACTCATGGGTACCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWGGAVI*THGYLG Trigger: ACCCAGGTACCCATGAGTCAAAATGACGGCTCCTCC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACCGCCGGTACTTGACGTaGCGCCGACAGCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNRRYLT*RRQLWL Trigger: CAGCCAGAGCTGTCGGCGCAACGTCAAGTACCGGCG...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTGCACCCGCCGGTACTaGACGTTGCGCCGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNCTRRY*TLRRQL Trigger: GAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGCA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS TCA 90 bp | GCTAGCCATGCGCACTCGCTCCTTAAAGCTCAGCTTCTGACTGCTTaGTGCCTCCCCTTGTTCTTTCTTGGTAGGGCTGCAGGTGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASHAHSLLKAQLLTA*CLPLFFLGRAAGVQ Trigger: TTGCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGAGGCATCAAGCAGTCAGAAGCTGAGCTTTAAGGAGCGAGTGCGCATGGCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029667.13 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTGGTCCTTGGTCAGGTTaGACTGTGCAAACTGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCGPWSG*TVQTEH Trigger: GTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACC...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGATTCGGGCCCCCTGCTaGCCCCGGCGGCTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVIRAPC*PRRLSL Trigger: GAGAGAGAGCCGCCGGGGCAAGCAGGGGGCCCGAAT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGGCTATCCACAGGACTTaGATAGTCAGAGGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWAIHRT*IVRGLF Trigger: GAACAGACCTCTGACTATCAAAGTCCTGTGGATAGC...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTAAACCTCAGTCTTCCTaGCCATCCTCTATAACGACA | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCKPQSS*PSSITT Trigger: TGTCGTTATAGAGGATGGCAAGGAAGACTGAGGTTT...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATCGCCGGTACTTGACGTaGCGCCGACAGCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYRRYLT*RRQLWL Trigger: CAGCCAGAGCTGTCGGCGCAACGTCAAGTACCGGCG...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNSPCSF*VGLQVC Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACAAGCGGGTTCGGTCGTaGAAGCTCCAACTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNKRVRS*KLQLFW Trigger: CCAGAAGAGTTGGAGCTTCAACGACCGAACCCGCTT...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTCCTTTTCCAAGAATTaGATCAACGCGTGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCSFSKN*INACLK Trigger: CTTCAGACACGCGTTGATCAAATTCTTGGAAAAGGA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGGATTTGCCCAAATCCTaGGGCACCATGGGGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVDLPKS*GTMGRT Trigger: TGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATC...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGTATTACCCTGAGTTTTaGCAGAGACAACTGCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWYYPEF*QRQLLL Trigger: CAATAGCAGTTGTCTCTGCAAAAACTCAGGGTAATA...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGAGCAGGCAGTCCAGCTaGGATTCGATGGACTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMSRQSS*DSMDWT Trigger: GGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCT...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGGGTACCTGGGTAGCTaGGCTGTGCATAGTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQGYLGS*AVHSRA Trigger: AGCCCTACTATGCACAGCCAAGCTACCCAGGTACCC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTGGGTACCTGGGTAGCTaGGCTGTGCATAGTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGGYLGS*AVHSRA Trigger: AGCCCTACTATGCACAGCCAAGCTACCCAGGTACCC...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCATGCACCCGCCGGTACTaGACGTTGCGCCGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGSFLCGITLLGRIEKCSCTRRY*TLRRQL Trigger: GAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGCA...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTTCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGSPCSF*VGLQVC Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGCAACTCTTCTGGACTTaGGTGGGGCTGCCCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVQLFWT*VGLPSA Trigger: TGCCGAGGGCAGCCCCACCAAAGTCCAGAAGAGTTG...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGAAGCGGGTTCGGTCGTaGAAGCTCCAACTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMKRVRS*KLQLFW Trigger: CCAGAAGAGTTGGAGCTTCAACGACCGAACCCGCTT...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTTTCCGGAGGACCTGTaGATAGATATCCAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNFPEDL*IDIQQA Trigger: TGCCTGCTGGATATCTATCAACAGGTCCTCCGGAAA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTAGGCCTCTTGAGATGTaGGCACTGGCTGACCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGRPLEM*ALADLV Trigger: AACGAGGTCAGCCAGTGCCAACATCTCAAGAGGCCT...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACTGGTTTGCAATGTTATaGGTGGCTACCACGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNWFAML*VATTEE Trigger: CTCCTCCGTGGTAGCCACCAATAACATTGCAAACCA...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQGSVKL*GLLAWV Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTGAGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGEGSVK*LGLLAW Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCTC...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCTCAGGGAACGGTCCTaGGTCAGGTTTGACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMLRERS*VRFDCA Trigger: TGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTCACCCCTGCCACTCTTTGGGGTGGAGCAATGGGTCTCTGCTAAGTGTTCAGTTATAAACAATTaGGATTCTCTCCACTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLPLFGVEQWVSAKCSVINN*DSLHLG Trigger: TCCCAAGTGGAGAGAATCCAAATTGTTTATAACTGA...ACACTTAGCAGAGACCCATTGCTCCACCCCAAAGAGTGGCAGGGGTGACGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAAGGGCGATTGTTCAGGGACAGCGTTCTGCTGGGGGAGAGGCTGGTGGTCAGTTATAAACAATTaGGATTCTCTCCACTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSKGDCSGTAFCWGRGWWSVINN*DSLHLG Trigger: TCCCAAGTGGAGAGAATCCAAATTGTTTATAACTGA...CCACCAGCCTCTCCCCCAGCAGAACGCTGTCCCTGAACAATCGCCCTTACTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGACACACTGGATGAGGTaGGCAGCTGGGTTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMTHWMR*AAGFLL Trigger: AAGAAGGAACCCAGCTGCCAACCTCATCCAGTGTGT...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATGATTTGCCCAAATCCTaGGGCACCATGGGGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYDLPKS*GTMGRT Trigger: TGTCCGCCCCATGGTGCCCAAGGATTTGGGCAAATC...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS TCA 90 bp | AGGAACCGGAGACTTCTGAGCGCTGACGTGGCGAAAATATTACCCTaGGTTTTTGCAGAGACAACTGCTATTGAAGCGATGAGAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: RNRRLLSADVAKILP*VFAETTAIEAMRTM Trigger: CATTGTTCTCATCGCTTCAATAGCAGTTGTCTCTGCAAAAACTCAGGGTAATATTTTCGCCACGTCAGCGCTCAGAAGTCTCCGGTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||
| CDS CCA 90 bp | TTGTTCTTTCTTGGTAGGGCTGCAGGTGTGCAAGGCCTTCAGATGTaGCTTCCAGGTTGCAATGGAAACAGATTTTTCATCAGCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LFFLGRAAGVQGLQM*LPGCNGNRFFISCI Trigger: TATGCAGCTGATGAAAAATCTGTTTCCATTGCAACCTGGAAGCCACATCTGAAGGCCTTGCACACCTGCAGCCCTACCAAGAAAGAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGTCAGCTTCTGACTGCTaGATGCCTCCCCTTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMSASDC*MPPLVL Trigger: AAGAACAAGGGGAGGCATCAAGCAGTCAGAAGCTGA...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029667.13 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTTGCTGGGGTCATCTGTaGTCTCGTGTTCTGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGCWGHL*SRVLLL Trigger: TAACAGCAGAACACGAGACAACAGATGACCCCAGCA...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGTTTCCGGAGGACCTGTaGATAGATATCCAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQFPEDL*IDIQQA Trigger: TGCCTGCTGGATATCTATCAACAGGTCCTCCGGAAA...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACCGGCGCTTATTTGGTTaGCAATGTTATTGGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNRRLFG*QCYWWL Trigger: TAGCCACCAATAACATTGCAAACCAAATAAGCGCCG...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVGSVKL*GLLAWV Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS TCA 90 bp | GTACACTCTGAAGAACTTCTGCTTATTACTACAGAACTTACTGCTTaGTGCCTCCCCTTGTTCTTTCTTGGTAGGGCTGCAGGTGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VHSEELLLITTELTA*CLPLFFLGRAAGVQ Trigger: TTGCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGAGGCATCAAGCAGTAAGTTCTGTAGTAATAAGCAGAAGTTCTTCAGAGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS GCA 90 bp | AAACCTCAGTCTTCCTTGCCATCCTCTATAACGACAACAGCAACCTaGAGACCAGATTCGAATGATGAACTCCAAGCCAAAGACAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: KPQSSLPSSITTTAT*RPDSNDELQAKDND Trigger: ATCGTTGTCTTTGGCTTGGAGTTCATCATTCGAATCTGGTCTGCAGGTTGCTGTTGTCGTTATAGAGGATGGCAAGGAAGACTGAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGGGCTGCTGGCTTGGGTGCGGCGCTTATTTGGTTTGCAATGTTATTGGGAATTAAGAGGCAACTaGAAGCCAATTTTGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGLLAWVRRLFGLQCYWELRGN*KPILYA Trigger: AGCATACAAAATTGGCTTCAAGTTGCCTCTTAATTC...CCAATAACATTGCAAACCAAATAAGCGCCGCACCCAAGCCAGCAGCCCCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174183.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGACACACTGGATGAGGTaGGCAGCTGGGTTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVTHWMR*AAGFLL Trigger: AAGAAGGAACCCAGCTGCCAACCTCATCCAGTGTGT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAAGCAGGCAGTCCAGCTaGGATTCGATGGACTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AGSFLCGITLLGRIEKCSSRQSS*DSMDWT Trigger: GGTCCAGTCCATCGAATCCAAGCTGGACTGCCTGCT...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGGCTATCCACAGGACTTaGATAGTCAGAGGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMAIHRT*IVRGLF Trigger: GAACAGACCTCTGACTATCAAAGTCCTGTGGATAGC...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTCGACCTGATCAGGTTTaGTACAGACAGAGATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGRPDQV*YRQRFA Trigger: GGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCG...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAAGGGGTCCCTGATACATTCACAATTCTTGCTGCCAGTGGGGTTCAACGTGACCAGCAGAGTATaGTTCAATGACATCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KKKGSLIHSQFLLPVGFNVTSRV*FNDIFY Trigger: GTAAAAGATGTCATTGAACAATACTCTGCTGGTCAC...GTTGAACCCCACTGGCAGCAAGAATTGTGAATGTATCAGGGACCCCTTCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | AACACACAAAGATCCACCCAACTTTGCCTCTCAAATCCTGGGATTAGAGGTGTGTCCTTTTCCAAGAATTaGATCAACGCGTGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTQRSTQLCLSNPGIRGVSFSKN*INACLK Trigger: CTTCAGACACGCGTTGATCAAATTCTTGGAAAAGGA...CACACCTCTAATCCCAGGATTTGAGAGGCAAAGTTGGGTGGATCTTTGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGTGGTTTGCAATGTTATaGGTGGCTACCACGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVWFAML*VATTEE Trigger: CTCCTCCGTGGTAGCCACCAATAACATTGCAAACCA...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGCGGCGCTTATTTGGTTaGCAATGTTATTGGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMRRLFG*QCYWWL Trigger: TAGCCACCAATAACATTGCAAACCAAATAAGCGCCG...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAGAGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSFLCGITLLGRIEKCSEGSVK*LGLLAW Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCTC...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGGATGTGGCTTCCAGGTaGCAATGGAAACAGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMDVASR*QWKQIF Trigger: AAAAATCTGTTTCCATTGCAACCTGGAAGCCACATC...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGAGGCCTCTTGAGATGTaGGCACTGGCTGACCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HILIGKHSQRKGQHENNVRPLEM*ALADLV Trigger: AACGAGGTCAGCCAGTGCCAACATCTCAAGAGGCCT...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGGAGGAGCCGTCATTTaGACTCATGGGTACCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HILIGKHSQRKGQHENNVGGAVI*THGYLG Trigger: ACCCAGGTACCCATGAGTCAAAATGACGGCTCCTCC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGCTCAGGGAACGGTCCTaGGTCAGGTTTGACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HILIGKHSQRKGQHENNVLRERS*VRFDCA Trigger: TGCACAGTCAAACCTGACCAAGGACCGTTCCCTGAG...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAGACATACCTCTGAAATGTACACACCCAAAACCTACCAACATCCAGGTGAAACCTCAGTCTTCCTaGCCATCCTCTATAACGACA | + |
|
Preference number: 5 (lower is better) Translates to: IIDIPLKCTHPKPTNIQVKPQSS*PSSITT Trigger: TGTCGTTATAGAGGATGGCAAGGAAGACTGAGGTTT...CACCTGGATGTTGGTAGGTTTTGGGTGTGTACATTTCAGAGGTATGTCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCTTCCAGAGTACTTCATGCAGTGATATGTATGGCTAAAAGAACAGCTATGTATTACCCTGAGTTTTaGCAGAGACAACTGCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RASRVLHAVICMAKRTAMYYPEF*QRQLLL Trigger: CAATAGCAGTTGTCTCTGCAAAAACTCAGGGTAATA...CATAGCTGTTCTTTTAGCCATACATATCACTGCATGAAGTACTCTGGAAGCCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGTGTGACCAGCAGAGTATaGTTCAATGACATCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LWVYTHVCNVRWRVHHSGVTSRV*FNDIFY Trigger: GTAAAAGATGTCATTGAACAATACTCTGCTGGTCAC...ACCTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGCAAACATGTTTTAGGTAACTTCCTGCATGGGATGATTGCTGTTCTATATTACAGAACTTACTGCTaGATGCCTCCCCTTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGKHVLGNFLHGMIAVLYYRTYC*MPPLVL Trigger: AAGAACAAGGGGAGGCATCAAGCAGTAAGTTCTGTA...ATATAGAACAGCAATCATCCCATGCAGGAAGTTACCTAAAACATGTTTGCCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGGGTATACACACATGTGTGTAATGTCCGTTGGAGGGTACATCATTCAGGAATTAAGAGGCAACTaGAAGCCAATTTTGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCGYTHMCVMSVGGYIIQELRGN*KPILYA Trigger: AGCATACAAAATTGGCTTCAAGTTGCCTCTTAATTC...CTGAATGATGTACCCTCCAACGGACATTACACACATGTGTGTATACCCACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGGGTCCTTGGTCAGGTTaGACTGTGCAAACTGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HILIGKHSQRKGQHENNVGPWSG*TVQTEH Trigger: GTGTTCAGTTTGCACAGTCAAACCTGACCAAGGACC...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTAATTGGAAAACATTCGCAGCGTAAAGGACAACATGAAAACAATGTGCGACCTGATCAGGTTTaGTACAGACAGAGATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HILIGKHSQRKGQHENNVRPDQV*YRQRFA Trigger: GGCAAATCTCTGTCTGTACAAAACCTGATCAGGTCG...CACATTGTTTTCATGTTGTCCTTTACGCTGCGAATGTTTTCCAATTAGAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAGATGTGGCTTCCAGGTaGCAATGGAAACAGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGSFLCGITLLGRIEKCSDVASR*QWKQIF Trigger: AAAAATCTGTTTCCATTGCAACCTGGAAGCCACATC...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTAGTTTCTTATGTGGGATAACTTTGTTGGGAAGAATAGAAAAATGTTCAGAATTAAGAGGCAACTaGAAGCCAATTTTGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSFLCGITLLGRIEKCSELRGN*KPILYA Trigger: AGCATACAAAATTGGCTTCAAGTTGCCTCTTAATTC...TGAACATTTTTCTATTCTTCCCAACAAAGTTATCCCACATAAGAAACTACCGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 |
||
| CDS CCA 72 bp | CCGCGCGGGTGCCGAGCAACAGCAGGCCGTCGCCCCTaGCGGCCGCCGAGTTCAGCAGCACCCTGCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRGCRATAGRRP*RPPSSAAPCRG Trigger: GCCGCGGCAGGGTGCTGCTGAACTCGGCGGCCGCCAGGGGCGACGGCCTGCTGTTGCTCGGCACCCGCGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 ENSMUST00000174183.8 |
||
| CDS TCA 72 bp | GCACGTTGTACAGATAGTTCTGCACCCGCCGGTACTTaGCGTTGCGCCGACAGCTCTGGCTGCTGGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARCTDSSAPAGT*RCADSSGCWCR Trigger: CCTACACCAGCAGCCAGAGCTGTCGGCGCAACGTCAAGTACCGGCGGGTGCAGAACTATCTGTACAACGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 ENSMUST00000174183.8 |
||
| CDS TCA 72 bp | GCGCACTCGCTCCTTAAAGCTCAGCTTCTGACTGCTTaGTGCCTCCCCTTGTTCTTTCTTGGTAGGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AHSLLKAQLLTA*CLPLFFLGRAA Trigger: TGCAGCCCTACCAAGAAAGAACAAGGGGAGGCATCAAGCAGTCAGAAGCTGAGCTTTAAGGAGCGAGTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029667.13 |
||
| CDS CAA 90 bp | GGTATCTATTACACAGAATGGTTTTCGAGCAAACCTCAGTCTTCCTaGCCATCCTCTATAACGACAACAGCAACCTGCAGACCAGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: GIYYTEWFSSKPQSS*PSSITTTATCRPDS Trigger: CGAATCTGGTCTGCAGGTTGCTGTTGTCGTTATAGAGGATGGCAAGGAAGACTGAGGTTTGCTCGAAAACCATTCTGTGTAATAGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||
| CDS TCA 72 bp | AGACTTCTGAGCGCTGACGTGGCGAAAATATTACCCTaGGTTTTTGCAGAGACAACTGCTATTGAAGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: RLLSADVAKILP*VFAETTAIEAM Trigger: CATCGCTTCAATAGCAGTTGTCTCTGCAAAAACTCAGGGTAATATTTTCGCCACGTCAGCGCTCAGAAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||
| CDS GCA 72 bp | TCTTCCTTGCCATCCTCTATAACGACAACAGCAACCTaGAGACCAGATTCGAATGATGAACTCCAAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSLPSSITTTAT*RPDSNDELQAK Trigger: TTTGGCTTGGAGTTCATCATTCGAATCTGGTCTGCAGGTTGCTGTTGTCGTTATAGAGGATGGCAAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||
| CDS GCA 72 bp | CTCTGCTTCCGTGAGGTGTACACTCTGAAGAACTTCTaGTTATTACTACAGAACTTACTGCTTGATGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCFREVYTLKNF*LLLQNLLLDAS Trigger: GGAGGCATCAAGCAGTAAGTTCTGTAGTAATAAGCAGAAGTTCTTCAGAGTGTACACCTCACGGAAGCAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS CAA 72 bp | TACACAGAATGGTTTTCGAGCAAACCTCAGTCTTCCTaGCCATCCTCTATAACGACAACAGCAACCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YTEWFSSKPQSS*PSSITTTATCR Trigger: TCTGCAGGTTGCTGTTGTCGTTATAGAGGATGGCAAGGAAGACTGAGGTTTGCTCGAAAACCATTCTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||
| CDS TCA 72 bp | GAAGAACTTCTGCTTATTACTACAGAACTTACTGCTTaGTGCCTCCCCTTGTTCTTTCTTGGTAGGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EELLLITTELTA*CLPLFFLGRAA Trigger: TGCAGCCCTACCAAGAAAGAACAAGGGGAGGCATCAAGCAGTAAGTTCTGTAGTAATAAGCAGAAGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS TCA 72 bp | TCAGCTTCTGACTCTGCTTCCGTGAGGTGTACACTCTaGAGAACTTCTGCTTATTACTACAGAACTTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SASDSASVRCTL*RTSAYYYRTYC Trigger: GCAGTAAGTTCTGTAGTAATAAGCAGAAGTTCTTCAGAGTGTACACCTCACGGAAGCAGAGTCAGAAGCTGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115300.8 |
||
| CDS TCA 72 bp | AATATTACCCTGAGTTTTTGCAGAGACAACTGCTATTaGAGCGATGAGAACAATGGTATCTATTACACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NITLSFCRDNCY*SDENNGIYYTE Trigger: TTCTGTGTAATAGATACCATTGTTCTCATCGCTTCAATAGCAGTTGTCTCTGCAAAAACTCAGGGTAATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029667.13 ENSMUST00000115300.8 ENSMUST00000173058.8 ENSMUST00000173404.2 |
||