Pregenerated sensors for KCNQ4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028631Ensembl transcript IDs: ENSMUST00000030376.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCCCATCCCCGGGTGGGGCCGGGCTTGGCAGGAGGACTTCCCTaGTCTACCTGGAAGGGCGGGCCTGGAGACCTCACCTTGCATAGC | + |
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Preference number: 1 (lower is better) Translates to: WAHPRVGPGLAGGLP*STWKGGPGDLTLHS Trigger: GCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTCCTCCTGCCAAGCCCGGCCCCACCCGGGGATGGGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | GTGCTTTATGGGCACCTGTGGGGGCACCTTGGGCCCATCCCCGGGTaGGGCCGGGCTTGGCAGGAGGACTTCCCTGCTCTACCTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VLYGHLWGHLGPIPG*GRAWQEDFPALPGR Trigger: CCTTCCAGGTAGAGCAGGGAAGTCCTCCTGCCAAGCCCGGCCCCACCCGGGGATGGGCCCAAGGTGCCCCCACAGGTGCCCATAAAGCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | GGTCTGGGAGCGCCCAGTGGCCTCCGGTCAGCCATTGCTGTGGCCTaGCATTTCATGCTCCTGGGGCGCTGGTACCTGGCTGGCATTGGG | + |
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Preference number: 1 (lower is better) Translates to: GLGAPSGLRSAIAVA*HFMLLGRWYLAGIG Trigger: CCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCGCTCCCAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | GACAGGGTCTGGGAGCGCCCAGTGGCCTCCGGTCAGCCATTGCTGTaGCCTGGCATTTCATGCTCCTGGGGCGCTGGTACCTGGCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: DRVWERPVASGQPLL*PGISCSWGAGTWLA Trigger: TGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCGCTCCCAGACCCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR GCA 90 bp | CGCCCAGTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATaGTCCTGGGGCGCTGGTACCTGGCTGGCATTGGGTATCTCGCCC | + |
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Preference number: 1 (lower is better) Translates to: RPVASGQPLLWPGIS*SWGAGTWLALGISP Trigger: GGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | GTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTaGGGCGCTGGTACCTGGCTGGCATTGGGTATCTCGCCCACCCAG | + |
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Preference number: 1 (lower is better) Translates to: VASGQPLLWPGISCS*GAGTWLALGISPTQ Trigger: CTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR GCA 90 bp | GACTTCCCTGCTCTACCTGGAAGGGCGGGCCTGGAGACCTCACCTTaGATAGCTAGAAGCTGGGTCAGGGACCAGGGCCCCAGTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: DFPALPGRAGLETSP*IARSWVRDQGPSAL Trigger: CAGAGCACTGGGGCCCTGGTCCCTGACCCAGCTTCTAGCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | GAATGGAGGTGGAGTATGGCCAAGCAGCCTGAGACCAGCTACTGCTaGGGCCCATCTCCCAGTAAGGGAGGGGCAGAGGAACCCCATGGG | + |
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Preference number: 1 (lower is better) Translates to: EWRWSMAKQPETSYC*GPSPSKGGAEEPHG Trigger: CCCATGGGGTTCCTCTGCCCCTCCCTTACTGGGAGATGGGCCCCAGCAGTAGCTGGTCTCAGGCTGCTTGGCCATACTCCACCTCCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR GCA 90 bp | TCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTaGCAGGGAGCGAGTTCAAGTAAGAGAGGAGTCCAGAGGCCCCGG | + |
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Preference number: 1 (lower is better) Translates to: SRPPRQLNTAYGLSP*QGASSSKRGVQRPR Trigger: CCGGGGCCTCTGGACTCCTCTCTTACTTGAACTCGCTCCCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | GGCCTGGCATTTCATGCTCCTGGGGCGCTGGTACCTGGCTGGCATTaGGTATCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GLAFHAPGALVPGWH*VSRPPRQLNTAYGL Trigger: GAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR GCA 90 bp | TCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATaGAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTCTCCCCCGG | + |
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Preference number: 1 (lower is better) Translates to: STQALALVHAGPSMR*RQFGLSPLFPSLPR Trigger: CCGGGGGAGACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | CCATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTGGTACCTaGCTGGCATTGGGTATCTCGCCCACCCAGACAGCTCAATACTGC | + |
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Preference number: 1 (lower is better) Translates to: PLLWPGISCSWGAGT*LALGISPTQTAQYC Trigger: GCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR TCA 90 bp | GCCCGCAGTGTTTGGGTGTTTGTGCCAATATGCAGCGCTGCCAATTaGAGTGAGAAAGTGGGGCAGAGACCGGTGCCGGTGAGAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARSVWVFVPICSAAN*SEKVGQRPVPVRAR Trigger: CCTGGCTCTCACCGGCACCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAAACACCCAAACACTGCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | TGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTGGTACCTGGCTaGCATTGGGTATCTCGCCCACCCAGACAGCTCAATACTGCGTAT | + |
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Preference number: 1 (lower is better) Translates to: CCGLAFHAPGALVPG*HWVSRPPRQLNTAY Trigger: ATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR TCA 90 bp | GCGCTGCCAATTGAAGTGAGAAAGTGGGGCAGAGACCGGTGCCGGTaGGAGCCAGGTGCAGTTGCTATAGCACTGGATACACGTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: ALPIEVRKWGRDRCR*EPGAVAIALDTRVL Trigger: GAGGACACGTGTATCCAGTGCTATAGCAACTGCACCTGGCTCTCACCGGCACCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR TCA 90 bp | AGGGGGTGGAGTGGCTCACCAGGGGGCAATACAATGCAAGTGAAGTaGGCCAGGATGGGCTCCATCCAGGGCCTGATGGTACATGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: RGWSGSPGGNTMQVK*ARMGSIQGLMVHAD Trigger: ATCTGCATGTACCATCAGGCCCTGGATGGAGCCCATCCTGGCTCACTTCACTTGCATTGTATTGCCCCCTGGTGAGCCACTCCACCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR GCA 90 bp | CTCGCTGAGACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTaGAAGGCCCCAAGGCCTAGGCCTGAGTTACACTATGGGGACACC | + |
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Preference number: 1 (lower is better) Translates to: LAETRKRMCLDSLQV*KAPRPRPELHYGDT Trigger: GGTGTCCCCATAGTGTAACTCAGGCCTAGGCCTTGGGGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGTCTCAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | TGGAGGGCCAATGGGAATGGATATCCAGCAGTAAGAGCGAGCCCCTaGGGTGACACCTACAAAGGGACAGAAAGGCCCAGGTCTTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: WRANGNGYPAVRASP*GDTYKGTERPRSCP Trigger: AGGGCAAGACCTGGGCCTTTCTGTCCCTTTGTAGGTGTCACCCCAGGGGCTCGCTCTTACTGCTGGATATCCATTCCCATTGGCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR TCA 90 bp | AGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATaGGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RIQPKPWHWYMQVPV*DADSSASAPCSQVS Trigger: GGAGACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR GCA 90 bp | ATAGTTTGCATATATGATGCCCATCTACCTTATGGCAGAGTCCTGTaGTTTATGGGCACCTGTGGGGGCACCTTGGGCCCATCCCCGGGT | + |
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Preference number: 1 (lower is better) Translates to: IVCIYDAHLPYGRVL*FMGTCGGTLGPSPG Trigger: ACCCGGGGATGGGCCCAAGGTGCCCCCACAGGTGCCCATAAAGCACAGGACTCTGCCATAAGGTAGATGGGCATCATATATGCAAACTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CCA 90 bp | TTCAAGTGTGTGGCATCGTGTGCATCGGTGTGTGCGGCATTCTGCTaGAGAAATAAAAGGACCATGCTTGTGGTTCCTGGTGGTGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: FKCVASCASVCAAFC*RNKRTMLVVPGGGP Trigger: TGGCCCACCACCAGGAACCACAAGCATGGTCCTTTTATTTCTCCAGCAGAATGCCGCACACACCGATGCACACGATGCCACACACTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR TCA 90 bp | TCTTGCCCTTTGGAGAGGACAGAGAGGTTTAGGCCCCATGCTGGGTaGGGATGGATGTTAAGCCAAAGAATGGAGGTGGAGTATGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: SCPLERTERFRPHAG*GWMLSQRMEVEYGQ Trigger: TTGGCCATACTCCACCTCCATTCTTTGGCTTAACATCCATCCTCACCCAGCATGGGGCCTAAACCTCTCTGTCCTCTCCAAAGGGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CAA 90 bp | GGAGCGGACAGGGTCTGGGAGCGCCCAGTGGCCTCCGGTCAGCCATaGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTGGTACCTGG | + |
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Preference number: 2 (lower is better) Translates to: GADRVWERPVASGQP*LWPGISCSWGAGTW Trigger: CCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCGCTCCCAGACCCTGTCCGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGGCAGGAGGACTTCCCTGCTCTACCTGGAAGGGCGGGCCTGGAGACCTCGGGCAATCCGAAGGCTaGCCCGCCCCTGAGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GLAGGLPCSTWKGGPGDLGQSEG*PAPEKP Trigger: GGGCTTCTCAGGGGCGGGGCAGCCTTCGGATTGCCC...GAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTCCTCCTGCCAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAAGGGCGGGCCTGGAGACCTCACCTTGCATAGCTAGAAGCTGGGTCAGGAGGGCCCCAGTGCTCTaGTCCCATTCCCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PGRAGLETSPCIARSWVRRAPVL*SHSQGR Trigger: TCTGCCCTGGGAATGGGAGCAGAGCACTGGGGCCCT...CCTGACCCAGCTTCTAGCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | CTACAAAGGGACAGAAAGGCCCAGGTCTTGCCCTTTGGAGAGGACAGAGAGGTTCCTGTGGGGGCACCTTaGGCCCATCCCCGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LQRDRKAQVLPFGEDREVPVGAP*AHPRVG Trigger: CCCCACCCGGGGATGGGCCCAAGGTGCCCCCACAGG...AACCTCTCTGTCCTCTCCAAAGGGCAAGACCTGGGCCTTTCTGTCCCTTTGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGCCAATATGCAGCGCTGCCAATTGAAGTGAGAAAGTGGGGCAGAGACCGGCCAGGGCAGAGCCCCTaGCAGGCGGGCCACATTGAG | + |
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Preference number: 2 (lower is better) Translates to: LCQYAALPIEVRKWGRDRPGQSP*QAGHIE Trigger: CTCAATGTGGCCCGCCTGGCAGGGGCTCTGCCCTGG...CCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCACCAGGGGGCAATACAATGCAAGTGAAGTGAGCCAGGATGGGCTCCATGGACCAGGGCCCCAGTaGTCTGCTCCCATTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WLTRGQYNASEVSQDGLHGPGPQ*SAPIPR Trigger: CCTGGGAATGGGAGCAGAGCACTGGGGCCCTGGTCC...ATGGAGCCCATCCTGGCTCACTTCACTTGCATTGTATTGCCCCCTGGTGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGAGTCCTGTGCTTTATaGGCACCTGTGGGGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: GTIGLSRIQPKPWHWYMQESCAL*APVGAP Trigger: AGGTGCCCCCACAGGTGCCCATAAAGCACAGGACTC...CTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGGGGAGACACGTGGATaGTCTAAACCCTCCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GTIGLSRIQPKPWHWYMQGETRG*SKPSSP Trigger: AGGAGAGGAGGGTTTAGAGCATCCACGTGTCTCCCC...CTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGCTGAGACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTGCAAGGCCGCTCAATACTGCGTATaGCCTCTCTCCCTGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAETRKRMCLDSLQVCKAAQYCV*PLSLPG Trigger: CCCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGC...GGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGTCTCAGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCTGGGGCGCTGGTACCTaGCTGGCATTGGGTATCTCG | + |
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Preference number: 2 (lower is better) Translates to: QDSTQALALVHAGPSMRCWGAGT*LALGIS Trigger: CGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCA...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTAGGCCCCATGCTGGGTaGGGATGGATGTTAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSRPHAG*GWMLSQ Trigger: TTGGCTTAACATCCATCCTCACCCAGCATGGGGCCT...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATCCAGGGCCTGATGGTACATGCAGATGGTAGGACAGAGATTGGGCACCATCCTGAGACCAGCTACTaGTGGGGCCCATCTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SIQGLMVHADGRTEIGHHPETSY*WGPSPS Trigger: ACTGGGAGATGGGCCCCAGCAGTAGCTGGTCTCAGG...ATGGTGCCCAATCTCTGTCCTACCATCTGCATGTACCATCAGGCCCTGGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCTGCAGCGCTGCCAATTaGAGTGAGAAAGTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QDSTQALALVHAGPSMRCCSAAN*SEKVGQ Trigger: CTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCA...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCAGACAGTATGGCCTCTCTCCCTaGCAGGGAGCGAGTTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: STQALALVHAGPSMRCRQYGLSP*QGASSS Trigger: ACTTGAACTCGCTCCCTGGCAGGGAGAGAGGCCATA...CTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCTGAGACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTGCAAGGCCCAGACAGCTCAATACTaGGTATGGCCTCTCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LAETRKRMCLDSLQVCKAQTAQY*VWPLSL Trigger: CAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTG...GGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGTCTCAGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCTGAGACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTGCAAGGCCCTGGAGACCTCACCTTaGATAGCTAGAAGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LAETRKRMCLDSLQVCKALETSP*IARSWV Trigger: GACCCAGCTTCTAGCTATGCAAGGTGAGGTCTCCAG...GGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGTCTCAGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGTTCCTGGTGGTGGGCCACTGTCTGGTAGGTTTAGGGGAAATACAGGAATGCATAGCTAGAAGCTaGGTCAGGGACCAGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LWFLVVGHCLVGLGEIQECIARS*VRDQGP Trigger: GGGGCCCTGGTCCCTGACCCAGCTTCTAGCTATGCA...TTCCTGTATTTCCCCTAAACCTACCAGACAGTGGCCCACCACCAGGAACCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGCCAGGCGGGCCACATTaGGCCTTGATGGAGCGGACA | + |
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Preference number: 2 (lower is better) Translates to: SHVSFGHRIILVSRPSVQPGGPH*ALMERT Trigger: TGTCCGCTCCATCAAGGCTCAATGTGGCCCGCCTGG...CTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGGATGGGGCCCGCAGTGTTTGGGTGTTTGTGCCAATATGCAGCGCTGCCCTATTGGACCTTTTGTaGGGAGGGGAGCAAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: TEDGARSVWVFVPICSAALLDLL*GGEQVK Trigger: TTTGACTTGCTCCCCTCCTCACAAAAGGTCCAATAG...GGCAGCGCTGCATATTGGCACAAACACCCAAACACTGCGGGCCCCATCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | GTACATGCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCAATGGAGGTGGAGTATaGCCAAGCAGCCTGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: VHAGPSMRCRQFGLSPLFNGGGV*PSSLRP Trigger: TGGTCTCAGGCTGCTTGGCCATACTCCACCTCCATT...GAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | GTACATGCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCGCCAAAGAATGGAGGTaGAGTATGGCCAAGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VHAGPSMRCRQFGLSPLFAKEWR*SMAKQP Trigger: AGGCTGCTTGGCCATACTCCACCTCCATTCTTTGGC...GAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGCTGAGACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTGCAAGGCCCAACCAGAGGACTATTaGACCTTTTGTGAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LAETRKRMCLDSLQVCKAQPEDY*TFCEEG Trigger: CCCCTCCTCACAAAAGGTCCAATAGTCCTCTGGTTG...GGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGTCTCAGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGCTCCATATGGCCAAGCAGCCTaGGACCAGCTACTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLLWSQDNLSLQTLCTAPYGQAA*DQLLLG Trigger: CCCCAGCAGTAGCTGGTCTCAGGCTGCTTGGCCATA...TGGAGCTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCAGGGCCTGATGGTACATGCAGATGGTAGGACAGAGATTGGGCACCATCCAGGTCTTGCCCTTTaGAGAGGACAGAGAGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: SIQGLMVHADGRTEIGHHPGLAL*RGQRGL Trigger: TAAACCTCTCTGTCCTCTCCAAAGGGCAAGACCTGG...ATGGTGCCCAATCTCTGTCCTACCATCTGCATGTACCATCAGGCCCTGGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTTGTGCGGCATTCTGCTaGAGAAATAAAAGGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: HHRAEQDSTQALALVHAGCAAFC*RNKRTM Trigger: CATGGTCCTTTTATTTCTCCAGCAGAATGCCGCACA...ACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGGGTCAGCCATTGCTGTaGCCTGGCATTTCATGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SHVSFGHRIILVSRPSVQGQPLL*PGISCS Trigger: GGAGCATGAAATGCCAGGCCACAGCAATGGCTGACC...CTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CAA 90 bp | CTGGTAGGTTTAGGGGAAATACAGGAACTTGTGCTGTCAAAACTGTaGGAGGGCCAATGGGAATGGATATCCAGCAGTAAGAGCGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LVGLGEIQELVLSKL*EGQWEWISSSKSEP Trigger: GGGCTCGCTCTTACTGCTGGATATCCATTCCCATTGGCCCTCCAACAGTTTTGACAGCACAAGTTCCTGTATTTCCCCTAAACCTACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCATGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGGCAATACAATGCAAGTaGAGTGAGCCAGGATGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SHVSFGHRIILVSRPSVQAIQCK*SEPGWA Trigger: AGCCCATCCTGGCTCACTTCACTTGCATTGTATTGC...CTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGCCAATATGCAGCGCTGCCAATTGAAGTGAGAAAGTGGGGCAGAGACCGGCATAGTTTGCATATATaGTGCCCATCTACCTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: LCQYAALPIEVRKWGRDRHSLHI*CPSTLW Trigger: CCATAAGGTAGATGGGCATCATATATGCAAACTATG...CCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGATGGTAGGACAGAGATTGGGCACCATAGGGCTGAGCAGGATTCAACCCAAATACAGGAACTTGTaGTGTCAAAACTGTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MQMVGQRLGTIGLSRIQPKYRNL*CQNCWR Trigger: CCTCCAACAGTTTTGACAGCACAAGTTCCTGTATTT...GGGTTGAATCCTGCTCAGCCCTATGGTGCCCAATCTCTGTCCTACCATCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | CCCCGGGTGGGGCCGGGCTTGGCAGGAGGACTTCCCTaGTCTACCTGGAAGGGCGGGCCTGGAGACCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PRVGPGLAGGLP*STWKGGPGDLT Trigger: GGTGAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTCCTCCTGCCAAGCCCGGCCCCACCCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | GGGCACCTGTGGGGGCACCTTGGGCCCATCCCCGGGTaGGGCCGGGCTTGGCAGGAGGACTTCCCTGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GHLWGHLGPIPG*GRAWQEDFPAL Trigger: TAGAGCAGGGAAGTCCTCCTGCCAAGCCCGGCCCCACCCGGGGATGGGCCCAAGGTGCCCCCACAGGTGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR TCA 72 bp | GGGCAGAGCCCCTGCCAGGCGGGCCACATTGAGCCTTaGTGGAGCGGACAGGGTCTGGGAGCGCCCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GQSPCQAGHIEP*WSGQGLGAPSG Trigger: GCCACTGGGCGCTCCCAGACCCTGTCCGCTCCATCAAGGCTCAATGTGGCCCGCCTGGCAGGGGCTCTGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | CTAGAAGCTGGGTCAGGGACCAGGGCCCCAGTGCTCTaGTCCCATTCCCAGGGCAGAGCCCCTGCCAGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LEAGSGTRAPVL*SHSQGRAPARR Trigger: CCGCCTGGCAGGGGCTCTGCCCTGGGAATGGGAGCAGAGCACTGGGGCCCTGGTCCCTGACCCAGCTTCTAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | GGGTCTGGGAGCGCCCAGTGGCCTCCGGTCAGCCATTaGTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSGSAQWPPVSH*CGLAFHAPGAL Trigger: CAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCGCTCCCAGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | GGGCCGGGCTTGGCAGGAGGACTTCCCTGCTCTACCTaGAAGGGCGGGCCTGGAGACCTCACCTTGCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPGLAGGLPCST*KGGPGDLTLHS Trigger: GCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTCCTCCTGCCAAGCCCGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | GCCTTGATGGAGCGGACAGGGTCTGGGAGCGCCCAGTaGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ALMERTGSGSAQ*PPVSHCCGLAF Trigger: AAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCGCTCCCAGACCCTGTCCGCTCCATCAAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | GCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATaGTCCTGGGGCGCTGGTACCTGGCTGGCATTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ASGQPLLWPGIS*SWGAGTWLALG Trigger: ACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | TGGCCTGGCATTTCATGCTCCTGGGGCGCTGGTACCTaGCTGGCATTGGGTATCTCGCCCACCCAGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WPGISCSWGAGT*LALGISPTQTA Trigger: AGCTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | ATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTaGTACCTGGCTGGCATTGGGTATCTCGCCCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: IAVAWHFMLLGR*YLAGIGYLAHP Trigger: TGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | GGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTaGGGCGCTGGTACCTGGCTGGCATTGGGTATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: GQPLLWPGISCS*GAGTWLALGIS Trigger: CGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | ATGCCCATCTACCTTATGGCAGAGTCCTGTGCTTTATaGGCACCTGTGGGGGCACCTTGGGCCCATCCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: MPIYLMAESCAL*APVGAPWAHPR Trigger: CCGGGGATGGGCCCAAGGTGCCCCCACAGGTGCCCATAAAGCACAGGACTCTGCCATAAGGTAGATGGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGCCTCCGGTCAGCCATaGCTGTGGCCTGGCATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTIGLSRIQPKPWHWYMQASGQP*LWPGIS Trigger: TGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGC...CTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR TCA 72 bp | CCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATaGGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PKPWHWYMQVPV*DADSSASAPCS Trigger: GGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | GCATTGGGTATCTCGCCCACCCAGACAGCTCAATACTaGGTATGGCCTCTCTCCCTGCCAGGGAGCGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALGISPTQTAQY*VWPLSLPGSEF Trigger: GAACTCGCTCCCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | TTTCATGCTCCTGGGGCGCTGGTACCTGGCTGGCATTaGGTATCTCGCCCACCCAGACAGCTCAATACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: FHAPGALVPGWH*VSRPPRQLNTA Trigger: CGCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | CTGGCATTTCATGCTCCTGGGGCGCTGGTACCTGGCTaGCATTGGGTATCTCGCCCACCCAGACAGCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LAFHAPGALVPG*HWVSRPPRQLN Trigger: ATTGAGCTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | GCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATaGAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ALALVHAGPSMR*RQFGLSPLFPS Trigger: ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | CTCCAGACCCTCTGTACAGCTCCATCTCTGAGGGGGTaGAGTGGCTCACCAGGGGGCAATACAATGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQTLCTAPSLRG*SGSPGGNTMQV Trigger: CACTTGCATTGTATTGCCCCCTGGTGAGCCACTCCACCCCCTCAGAGATGGAGCTGTACAGAGGGTCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | CCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTaGCAGGGAGCGAGTTCAAGTAAGAGAGGAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRQLNTAYGLSP*QGASSSKRGVQ Trigger: CTGGACTCCTCTCTTACTTGAACTCGCTCCCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | GACCCTCTGTACAGCTCCATCTCTGAGGGGGTGGAGTaGCTCACCAGGGGGCAATACAATGCAAGTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DPLYSSISEGVE*LTRGQYNASEV Trigger: CACTTCACTTGCATTGTATTGCCCCCTGGTGAGCCACTCCACCCCCTCAGAGATGGAGCTGTACAGAGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCCCCAGGTCTTGCCCTTaGGAGAGGACAGAGAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QDSTQALALVHAGPSMRCPRSCP*ERTERF Trigger: AAACCTCTCTGTCCTCTCCAAAGGGCAAGACCTGGG...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTGTGCTGTCAAAACTGTaGGAGGGCCAATGGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSVLSKL*EGQWEW Trigger: CCATTCCCATTGGCCCTCCAACAGTTTTGACAGCAC...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR TCA 72 bp | GTTTGGGTGTTTGTGCCAATATGCAGCGCTGCCAATTaGAGTGAGAAAGTGGGGCAGAGACCGGTGCCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VWVFVPICSAAN*SEKVGQRPVPV Trigger: CACCGGCACCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAAACACCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | AGGATGGATGTTAAGCCAAAGAATGGAGGTGGAGTATaGCCAAGCAGCCTGAGACCAGCTACTGCTGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RMDVKPKNGGGV*PSSLRPATAGA Trigger: GGCCCCAGCAGTAGCTGGTCTCAGGCTGCTTGGCCATACTCCACCTCCATTCTTTGGCTTAACATCCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR TCA 72 bp | ATTGAAGTGAGAAAGTGGGGCAGAGACCGGTGCCGGTaGGAGCCAGGTGCAGTTGCTATAGCACTGGATACA | + |
|
Preference number: 3 (lower is better) Translates to: IEVRKWGRDRCR*EPGAVAIALDT Trigger: TGTATCCAGTGCTATAGCAACTGCACCTGGCTCTCACCGGCACCGGTCTCTGCCCCACTTTCTCACTTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | ATATATGATGCCCATCTACCTTATGGCAGAGTCCTGTaGTTTATGGGCACCTGTGGGGGCACCTTGGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IYDAHLPYGRVL*FMGTCGGTLGP Trigger: TGGGCCCAAGGTGCCCCCACAGGTGCCCATAAAGCACAGGACTCTGCCATAAGGTAGATGGGCATCATATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | ACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTaGAAGGCCCCAAGGCCTAGGCCTGAGTTACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: TRKRMCLDSLQV*KAPRPRPELHY Trigger: ATAGTGTAACTCAGGCCTAGGCCTTGGGGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR TCA 72 bp | TTGGAGAGGACAGAGAGGTTTAGGCCCCATGCTGGGTaGGGATGGATGTTAAGCCAAAGAATGGAGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LERTERFRPHAG*GWMLSQRMEVE Trigger: CTCCACCTCCATTCTTTGGCTTAACATCCATCCTCACCCAGCATGGGGCCTAAACCTCTCTGTCCTCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | CAGGAACTTGTGCTGTCAAAACTGTTGGAGGGCCAATaGGAATGGATATCCAGCAGTAAGAGCGAGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QELVLSKLLEGQ*EWISSSKSEPL Trigger: CAGGGGCTCGCTCTTACTGCTGGATATCCATTCCCATTGGCCCTCCAACAGTTTTGACAGCACAAGTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CCA 72 bp | GTGGCATCGTGTGCATCGGTGTGTGCGGCATTCTGCTaGAGAAATAAAAGGACCATGCTTGTGGTTCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VASCASVCAAFC*RNKRTMLVVPG Trigger: ACCAGGAACCACAAGCATGGTCCTTTTATTTCTCCAGCAGAATGCCGCACACACCGATGCACACGATGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCATGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGAGAAAGGCCCAGGTCTaGCCCTTTGGAGAGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHVSFGHRIILVSRPSVQRKAQV*PFGEDR Trigger: TCTGTCCTCTCCAAAGGGCAAGACCTGGGCCTTTCT...CTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACATGCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCGGGAAATACAGGAACTaGTGCTGTCAAAACTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VHAGPSMRCRQFGLSPLFGKYRN*CCQNCW Trigger: CCAACAGTTTTGACAGCACAAGTTCCTGTATTTCCC...GAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | TGTGTGGCATCGTGTGCATCGGTGTGTGCGGCATTCTaGTGGAGAAATAAAAGGACCATGCTTGTGGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CVASCASVCAAF*WRNKRTMLVVP Trigger: AGGAACCACAAGCATGGTCCTTTTATTTCTCCAGCAGAATGCCGCACACACCGATGCACACGATGCCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR GCA 72 bp | AAACTGAGGATGGGGCCCGCAGTGTTTGGGTGTTTGTaGCAATATGCAGCGCTGCCAATTGAAGTGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLRMGPAVFGCL*QYAALPIEVRK Trigger: CTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAAACACCCAAACACTGCGGGCCCCATCCTCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTGGCAGAAGGAGGCACTaGCTGGCCGGTGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VASGQPLLWPGISCSWGAGRRRH*LAGGRW Trigger: CCACCTGCCACCGGCCAGGCAGTGCCTCCTTCTGCC...AGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CAA 72 bp | AGGGTCTGGGAGCGCCCAGTGGCCTCCGGTCAGCCATaGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVWERPVASGQP*LWPGISCSWGA Trigger: AGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGCGCTCCCAGACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR TCA 90 bp | GCATTTCATGCTCCTGGGGCGCTGGTACCTGGCTGGCATTGGGTATCTCGCCCACACTCTGCACGGCCGTaGGCGCCACCAACTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AFHAPGALVPGWHWVSRPHSARP*APPTPR Trigger: GCGCGGAGTTGGTGGCGCTCACGGCCGTGCAGAGTG...TGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGCATGAAATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAGTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCCCGCAGCTATCACTaGCACCGAGGCCACGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AQWPPVSHCCGLAFHAPGARSYH*HRGHEH Trigger: GTGTTCGTGGCCTCGGTGGCAGTGATAGCTGCGGGC...CCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCACTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGGGGCGCTGGTACCTGGCTGGCATTGGGTATCTCGCCCACCCAGACAGCCAACAGCTTCCAGGTaGCACCGCGGCGATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: APGALVPGWHWVSRPPRQPTASR*HRGDPY Trigger: GTATGGATCGCCGCGGTGGCACCTGGAAGCTGTTGG...CTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTTCGAAGAGCGGCACTTaGACAGTGCCCAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VASGQPLLWPGISCSWGASKSGT*TVPRLA Trigger: GGCCAGCCTGGGCACTGTGCAAGTGCCGCTCTTCGA...AGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTTGTGGTAGTCCGAGGTaGTGTCGGGGTCGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VASGQPLLWPGISCSWGACGSPR*CRGRRA Trigger: CGCTCTTCGACCCCGACATCACCTCGGACTACCACA...AGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | TATCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTGCCAGGGGCGGAGGGGCCAGATaGTGCTTGGAGGGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLAHPDSSILRMASLPARGGGAR*CLEGPV Trigger: GACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCC...CCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCCCTGCTCTACCTGGAAGGGCGGGCCTGGAGACCTCACCTTGCATAGCTCCCGGCTTGTGTCCGTaGAGTACAGGCGCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DFPALPGRAGLETSPCIAPGLCP*STGATQ Trigger: CTGCGTGGCGCCTGTACTCCACGGACACAAGCCGGG...AGCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTGGAGGGGCCAGATGCTaGTTGGAGGGGCCTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSGGARC*LEGPVR Trigger: GCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCC...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR GCA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTCCTTCTCCCGAGTCTTaGGGTCCCCAGGGCCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSPSPES*GPQGPD Trigger: GTCGGGGCCCTGGGGACCGCAAGACTCGGGAGAAGG...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | CACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCTCGGCCACTTCCTCTaGGGGGCCCTCCTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHRAEQDSTQALALVHAGLGHFL*GALLSR Trigger: TCTGCTGAGGAGGGCCCCTCAGAGGAAGTGGCCGAG...ACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGATGGGGCCCGCAGTGTTTGGGTGTTTGTGCCAATATGCAGCGCTGCCCGGCAGCCAGAACCCTaGCCAGCCATGTATGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEDGARSVWVFVPICSAARQPEP*PAMYVA Trigger: CGCCACATACATGGCTGGGCAGGGTTCTGGCTGCCG...GGCAGCGCTGCATATTGGCACAAACACCCAAACACTGCGGGCCCCATCCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTGGGGCGCTGGTACCTGGCTGGCATTGGGTATCTCGCCCACCCAGACAGAGTTCCTGGTGCTCCTaGATGGTGGACAGTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: APGALVPGWHWVSRPPRQSSWCS*MVDSTD Trigger: GTCTGTACTGTCCACCATCCAGGAGCACCAGGAACT...CTGTCTGGGTGGGCGAGATACCCAATGCCAGCCAGGTACCAGCGCCCCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | TCCATCCAGGGCCTGATGGTACATGCAGATGGTAGGACAGAGATTGGGCACCATCTGGCCGGTGGCAGGTaGCAACGGGCGGGTAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIQGLMVHADGRTEIGHHLAGGR*QRAGSE Trigger: CTCGCTACCCGCCCGTTGCCACCTGCCACCGGCCAG...ATGGTGCCCAATCTCTGTCCTACCATCTGCATGTACCATCAGGCCCTGGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | TTGTGGTTCCTGGTGGTGGGCCACTGTCTGGTAGGTTTAGGGGAAATACAGGAAGCACTGCCTGGCCGGTaGCAGGTGGCAACGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWFLVVGHCLVGLGEIQEALPGR*QVATGG Trigger: CCCGCCCGTTGCCACCTGCCACCGGCCAGGCAGTGC...TTCCTGTATTTCCCCTAAACCTACCAGACAGTGGCCCACCACCAGGAACCACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCAATGGGAATGGATATCCAGCAGTAAGAGCGAGCCCCTGGGGTGACACCCCCCGACCCACAATTTaGTCCACCCGGGCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RANGNGYPAVRASPWGDTPRPTI*STRACR Trigger: CCTGCAAGCCCGGGTGGACCAAATTGTGGGTCGGGG...GGTGTCACCCCAGGGGCTCGCTCTTACTGCTGGATATCCATTCCCATTGGCCCT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGCGCGCCCCATCATGCTaGTTTCATCCACTGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTIGLSRIQPKPWHWYMQRAPSC*FHPLPP Trigger: CGGAGGCAGTGGATGAAATCAGCATGATGGGGCGCG...CTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGGGCGGGCCTGGAGACCTCACCTTGCATAGCTAGAAGCTGGGTCAGGCTGCGCTTCTCAAAGTaGTTCTGCCTGTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRAGLETSPCIARSWVRLRFSK*FCLCCS Trigger: GGAGCAGCACAGGCAGAAGCACTTTGAGAAGCGCAG...CCTGACCCAGCTTCTAGCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTCGCCCACCTGCTCACTaGTTGGCGAGGTGGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSRPPAH*LARWES Trigger: CGATTCCCACCTCGCCAAGCAGTGAGCAGGTGGGCG...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CCA 90 bp | TCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCAGACAGCACTGCTTGGCGAGGTaGGAATCGGCGGAGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STQALALVHAGPSMRCRQHCLAR*ESAEGP Trigger: TGGCCCCTCCGCCGATTCCCACCTCGCCAAGCAGTG...CTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCCTTGCTGGGGCTGGATaGCTCGCCCACCTGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QDSTQALALVHAGPSMRCLAGAG*LAHLLT Trigger: AGTGAGCAGGTGGGCGAGGCATCCAGCCCCAGCAAG...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCACCAGGGGGCAATACAATGCAAGTGAAGTGAGCCAGGATGGGCTCCATCAGAGCAGCGAGGCTTaGGTCTTAGAGAGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLTRGQYNASEVSQDGLHQSSEA*VLERPG Trigger: TCCGGGCCTCTCTAAGACTCAAGCCTCGCTGCTCTG...ATGGAGCCCATCCTGGCTCACTTCACTTGCATTGTATTGCCCCCTGGTGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR TCA 90 bp | TATCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTGCCAGGCATGTTGGTGCTGACTaGGCGAGAGATGCTGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YLAHPDSSILRMASLPARHVGAD*ARDAER Trigger: ACGCTCAGCATCTCTCGCTCAGTCAGCACCAACATG...CCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR GCA 90 bp | TGGGTATCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTGCGATGCTGAGCGTCTGTaGGGAGACAGAGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WVSRPPRQLNTAYGLSPCDAERL*GDRDVL Trigger: GAGGACATCTCTGTCTCCGCACAGACGCTCAGCATC...GCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | GGCACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGCCTGGTGCTCCTGGATaGTGGACAGTACAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTIGLSRIQPKPWHWYMQPGAPG*WTVQTA Trigger: TGCTGTCTGTACTGTCCACCATCCAGGAGCACCAGG...CTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CCA 90 bp | CTACAAAGGGACAGAAAGGCCCAGGTCTTGCCCTTTGGAGAGGACAGAGAGGTTGGGCCAGATGCTGCTTaGAGGGGCCTGTCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQRDRKAQVLPFGEDREVGPDAA*RGLSAS Trigger: AGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCC...AACCTCTCTGTCCTCTCCAAAGGGCAAGACCTGGGCCTTTCTGTCCCTTTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCCGATGTACCAGGCGGTaGTCAGCTCCTTACTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QDSTQALALVHAGPSMRCRCTRR*SAPYCA Trigger: CGCACAGTAAGGAGCTGATCACCGCCTGGTACATCG...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCAATACAATGCAAGTGAAGTGAGCCAGGATGGGCTCCATCCAGGGCCTAGCGGGTGCGGTCATTaGAGCTCCAGCTTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQYNASEVSQDGLHPGPSGCGH*SSSFSA Trigger: TGCAGAAAAGCTGGAGCTTCAATGACCGCACCCGCT...AGGCCCTGGATGGAGCCCATCCTGGCTCACTTCACTTGCATTGTATTGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR GCA 90 bp | TGGGTATCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTGCGATCCATACGCACCATaGGCAGGATCTGTAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVSRPPRQLNTAYGLSPCDPYAP*AGSVGS Trigger: GCTTCCTACAGATCCTGCGCATGGTGCGTATGGATC...GCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR GCA 90 bp | TCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCAGACAGGGGCAAAGAAGGAGATaGCCAGTAAGGCGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STQALALVHAGPSMRCRQGQRRR*PVRRSR Trigger: CCGGCTTCGCCTTACTGGGCATCTCCTTCTTTGCCC...CTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| 3UTR CAA 72 bp | CCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTaGTTCCCAAGTCTCCCCCGGAGTATTGTCGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSMRCRQFGLSP*FPSLPRSIVVG Trigger: TCCAACGACAATACTCCGGGGGAGACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCTGCGGATTCGGTCTTTaGTGCCCATCCGGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSTQALALVHAGPSMRCCGFGL*CPSGCF Trigger: AAAGCAGCCGGATGGGCATCAAAGACCGAATCCGCA...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | GTACATGCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCGCCCAGCCATGTATGTaGCGTCTTGTCACCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHAGPSMRCRQFGLSPLFAQPCM*RLVTIA Trigger: GGCTATGGTGACAAGACGCCACATACATGGCTGGGC...GAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | TGGCTCACCAGGGGGCAATACAATGCAAGTGAAGTGAGCCAGGATGGGCTCCATAGAGGGCCAGCTCTCTaGAAGATGGGAGAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLTRGQYNASEVSQDGLHRGPAL*KMGECC Trigger: ACAGCATTCTCCCATCTTTCAGAGAGCTGGCCCTCT...ATGGAGCCCATCCTGGCTCACTTCACTTGCATTGTATTGCCCCCTGGTGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | TCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCAGACAGGCCGCAGCGTCTCCTTaGATTTCCTTTTGGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: STQALALVHAGPSMRCRQAAASP*ISFWLP Trigger: TGGTAGCCAAAAGGAAATTCAAGGAGACGCTGCGGC...CTGTCTGCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR GCA 90 bp | TACAGGAACTTGTGCTGTCAAAACTGTTGGAGGGCCAATGGGAATGGATATCCATCGCCCTGTTCACTCTaGACGGCCGTGAGCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YRNLCCQNCWRANGNGYPSPCSL*TAVSAT Trigger: GGTGGCGCTCACGGCCGTGCAGAGTGAACAGGGCGA...TGGATATCCATTCCCATTGGCCCTCCAACAGTTTTGACAGCACAAGTTCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR GCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCTTGGCAAGTTCCTGGTaGTCCTGGATGGTGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QDSTQALALVHAGPSMRCLASSW*SWMVDS Trigger: ACTGTCCACCATCCAGGAGCACCAGGAACTTGCCAA...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGATGGTAGGACAGAGATTGGGCACCATAGGGCTGAGCAGGATTCAACCCTCGTTGGCAAGTTCCTaGTGCTCCTGGATGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MQMVGQRLGTIGLSRIQPSLASS*CSWMVD Trigger: GTCCACCATCCAGGAGCACCAGGAACTTGCCAACGA...GGGTTGAATCCTGCTCAGCCCTATGGTGCCCAATCTCTGTCCTACCATCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | CTACAAAGGGACAGAAAGGCCCAGGTCTTGCCCTTTGGAGAGGACAGAGAGGTTGGAAAGAGGCAAAGATaGGCACCAGGAACCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQRDRKAQVLPFGEDREVGKRQR*APGTRC Trigger: ACATCGGGTTCCTGGTGCTCATCTTTGCCTCTTTCC...AACCTCTCTGTCCTCTCCAAAGGGCAAGACCTGGGCCTTTCTGTCCCTTTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | TGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGCTCCACTGAGCGAGAGATGCTaGGCGTCTGTGCGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLWSQDNLSLQTLCTAPLSERC*ASVRRQ Trigger: CTGTCTCCGCACAGACGCTCAGCATCTCTCGCTCAG...TGGAGCTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCCCAGTATGAGATGCAGGAGAAGTCAGAGTTaGCATCCTTCTCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDSTQALALVHAGPSMRCRRSQS*HPSQPG Trigger: ACCTGGCTGAGAAGGATGCCAACTCTGACTTCTCCT...GCATCTCATACTGGGACCTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | CTCGCTGAGACTAGGAAGAGGATGTGCCTGGATTCTCTCCAGGTGTGCAAGGCCGATGAGATTAGCTGCTaGCATCCTGCGCTTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAETRKRMCLDSLQVCKADEISC*HPALLK Trigger: TTTGAGAAGCGCAGGATGCCAGCAGCTAATCTCATC...GGCCTTGCACACCTGGAGAGAATCCAGGCACATCCTCTTCCTAGTCTCAGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR GCA 90 bp | TTGTGCCAATATGCAGCGCTGCCAATTGAAGTGAGAAAGTGGGGCAGAGACCGGTCGATGGACTGCACCTaGTTTTCCACCTTGACTACG | + |
|
Preference number: 4 (lower is better) Translates to: LCQYAALPIEVRKWGRDRSMDCT*FSTLTT Trigger: CGTAGTCAAGGTGGAAAAGCAGGTGCAGTCCATCGA...CCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CCA 90 bp | CTACAAAGGGACAGAAAGGCCCAGGTCTTGCCCTTTGGAGAGGACAGAGAGGTTCATAGTAATACCAGGTaGCTGTCAAATAGGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQRDRKAQVLPFGEDREVHSNTR*LSNRPG Trigger: GCCGGGCCTATTTGACAGCCACCTGGTATTACTATG...AACCTCTCTGTCCTCTCCAAAGGGCAAGACCTGGGCCTTTCTGTCCCTTTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CAA 72 bp | CTAAAACTGAGGATGGGGCCCGCAGTGTTTGGGTGTTaGTGCCAATATGCAGCGCTGCCAATTGAAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKLRMGPAVFGC*CQYAALPIEVR Trigger: TCTCACTTCAATTGGCAGCGCTGCATATTGGCACAAACACCCAAACACTGCGGGCCCCATCCTCAGTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR TCA 90 bp | TCCCATGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGGTCCAGGTGTCCTGCTaGATACTGCTCAATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFGHRIILVSRPSVQVQVSC*ILLNDI Trigger: GATGTCATTGAGCAGTATTCAGCAGGACACCTGGAC...CTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCTTTGGTCACAGGATAATCTTAGTCTCCAGACCCTCTGTACAGCTCCACAGCTCTCTGAAAGATaGGAGAATGCTGTCATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLLWSQDNLSLQTLCTAPQLSER*ENAVIV Trigger: TACTATGACAGCATTCTCCCATCTTTCAGAGAGCTG...TGGAGCTGTACAGAGGGTCTGGAGACTAAGATTATCCTGTGACCAAAGGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| 3UTR CAA 72 bp | TTAGGGGAAATACAGGAACTTGTGCTGTCAAAACTGTaGGAGGGCCAATGGGAATGGATATCCAGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGEIQELVLSKL*EGQWEWISSSK Trigger: CTTACTGCTGGATATCCATTCCCATTGGCCCTCCAACAGTTTTGACAGCACAAGTTCCTGTATTTCCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CCA 90 bp | TGCTTTCCCCAGGGCAGAAGGAGGCACTGCCTGGCCGGTGGCAGGTaGCAACGGGCGGGTAGCGAGAGGGCGCTCCATCAGGTACTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CFPQGRRRHCLAGGR*QRAGSERALHQVLA Trigger: CGCCAGTACCTGATGGAGCGCCCTCTCGCTACCCGCCCGTTGCCACCTGCCACCGGCCAGGCAGTGCCTCCTTCTGCCCTGGGGAAAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCCTCCGGTCAGCCATTGCTGTGGCCTGGCATTTCATGCTCCTGGGGCGCTGGGGCCAGATGCTGCTaGGAGGGGCCTGTCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VASGQPLLWPGISCSWGAGARCC*EGPVRF Trigger: GAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCC...AGCGCCCCAGGAGCATGAAATGCCAGGCCACAGCAATGGCTGACCGGAGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS GCA 90 bp | ACCTGCTCACTGCTTGGCGAGGTGGGAATCGGCGGAGGGGCCAGATaGTGCTTGGAGGGGCCTGTCCGCTTCTGGGAGCTGCTTATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TCSLLGEVGIGGGAR*CLEGPVRFWELLMR Trigger: CCGCATAAGCAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGCCAAGCAGTGAGCAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS GCA 90 bp | CTGCCTCCGTGTCTGAAGGACCCTTATCGCCCTTCTCCCGAGTCTTaGGGTCCCCAGGGCCCCGACCCACAATTTGGTCCACCCGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPPCLKDPYRPSPES*GPQGPDPQFGPPGL Trigger: AAGCCCGGGTGGACCAAATTGTGGGTCGGGGCCCTGGGGACCGCAAGACTCGGGAGAAGGGCGATAAGGGTCCTTCAGACACGGAGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS CCA 90 bp | CACTGCTTGGCGAGGTGGGAATCGGCGGAGGGGCCAGATGCTGCTTaGAGGGGCCTGTCCGCTTCTGGGAGCTGCTTATGCGGATTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HCLARWESAEGPDAA*RGLSASGSCLCGFG Trigger: ACCGAATCCGCATAAGCAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGCCAAGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS GCA 90 bp | TGCTCACTGCTTGGCGAGGTGGGAATCGGCGGAGGGGCCAGATGCTaGTTGGAGGGGCCTGTCCGCTTCTGGGAGCTGCTTATGCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: CSLLGEVGIGGGARC*LEGPVRFWELLMRI Trigger: AATCCGCATAAGCAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGCCAAGCAGTGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCCCTGCTCTACCTGGAAGGGCGGGCCTGGAGACCTCACCTTGCATAGCTGGCCGTAAGCCCCCATaGCGGGCCCGTTGTATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DFPALPGRAGLETSPCIAGRKPP*RARCMC Trigger: GCACATACAACGGGCCCGCAATGGGGGCTTACGGCC...AGCTATGCAAGGTGAGGTCTCCAGGCCCGCCCTTCCAGGTAGAGCAGGGAAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | GTACATGCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCCTTCTCCCGAGTCTaGCGGTCCCCAGGGCCCCGA | + |
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Preference number: 5 (lower is better) Translates to: VHAGPSMRCRQFGLSPLFPFSRV*RSPGPR Trigger: TCGGGGCCCTGGGGACCGCAAGACTCGGGAGAAGGG...GAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | GGCACCATAGGGCTGAGCAGGATTCAACCCAAGCCCTGGCACTGGTACATGCAGGTCGAAGAGCGGCACTaGCACAGTGCCCAGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GTIGLSRIQPKPWHWYMQVEERH*HSAQAG Trigger: GCCAGCCTGGGCACTGTGCAAGTGCCGCTCTTCGAC...CTGCATGTACCAGTGCCAGGGCTTGGGTTGAATCCTGCTCAGCCCTATGGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTGCCCCGACCCACAATTaGGTCCACCCGGGCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSAPTHN*VHPGLQ Trigger: CTGCAAGCCCGGGTGGACCAAATTGTGGGTCGGGGC...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS TCA 90 bp | GACTACGCGCCCCATCATGCTGATTTCATCCACTGCCTCCGTGTCTaGAGGACCCTTATCGCCCTTCTCCCGAGTCTTGCGGTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DYAPHHADFIHCLRV*RTLIALLPSLAVPR Trigger: CCTGGGGACCGCAAGACTCGGGAGAAGGGCGATAAGGGTCCTTCAGACACGGAGGCAGTGGATGAAATCAGCATGATGGGGCGCGTAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCCAAGTGCAGAGCAGCGAGGCTaGAGTCTTAGAGAGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: AGPSMRCRQFGLSPLFPSAEQRG*SLREAR Trigger: CCGGGCCTCTCTAAGACTCAAGCCTCGCTGCTCTGC...ACTTGGGAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 90 bp | CTCACCTCCAGGGGCCGTAAGCCCCCATTGCGGGCCCGTTGTATGTaGTCAAACAAGAGGGCCAGCTCTCTGAAAGATGGGAGAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTSRGRKPPLRARCM*SNKRASSLKDGRML Trigger: CAGCATTCTCCCATCTTTCAGAGAGCTGGCCCTCTTGTTTGAGCACATACAACGGGCCCGCAATGGGGGCTTACGGCCCCTGGAGGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGGATGGGGCCCGCAGTGTTTGGGTGTTTGTGCCAATATGCAGCGCTGCCTCAAATAGGCCCGGCTaGTGTCCGTGGAGTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: TEDGARSVWVFVPICSAASNRPG*CPWSTG Trigger: GCCTGTACTCCACGGACACAAGCCGGGCCTATTTGA...GGCAGCGCTGCATATTGGCACAAACACCCAAACACTGCGGGCCCCATCCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCAATATGCAGCGCTGCCAATTGAAGTGAGAAAGTGGGGCAGAGACCGGCCACCTGCTCACTGCTaGGCGAGGTGGGAATCGGCG | + |
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Preference number: 5 (lower is better) Translates to: LCQYAALPIEVRKWGRDRPPAHC*ARWESA Trigger: CGCCGATTCCCACCTCGCCAAGCAGTGAGCAGGTGG...CCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 90 bp | CGCGGACGTAGCAAAGATGTTGCCTTGTGTGCCCGCAGCTATCACTaGCACCGAGGCCACGAACACGATGAAGTCGATGACACAGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RGRSKDVALCARSYH*HRGHEHDEVDDTEG Trigger: CCCTTCTGTGTCATCGACTTCATCGTGTTCGTGGCCTCGGTGGCAGTGATAGCTGCGGGCACACAAGGCAACATCTTTGCTACGTCCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | TGGAGGGCCAATGGGAATGGATATCCAGCAGTAAGAGCGAGCCCCTGGGGTGACCCCATTGCGGGCCCGTaGTATGTGCTCAAACAAGAG | + |
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Preference number: 5 (lower is better) Translates to: WRANGNGYPAVRASPWGDPIAGP*YVLKQE Trigger: CTCTTGTTTGAGCACATACAACGGGCCCGCAATGGG...GTCACCCCAGGGGCTCGCTCTTACTGCTGGATATCCATTCCCATTGGCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | TGGAGGGCCAATGGGAATGGATATCCAGCAGTAAGAGCGAGCCCCTGGGGTGACATGCGGATTCGGTCTTaGATGCCCATCCGGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: WRANGNGYPAVRASPWGDMRIRS*MPIRLL Trigger: AAGCAGCCGGATGGGCATCAAAGACCGAATCCGCAT...GTCACCCCAGGGGCTCGCTCTTACTGCTGGATATCCATTCCCATTGGCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | GTACATGCAGGTCCCAGTATGAGATGCAGACAGTTCGGCCTCAGCCCCTTGTTCCGGGCTTGCAGGCTCTaGATTCGTCCCAGCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: VHAGPSMRCRQFGLSPLFRACRL*IRPSMS Trigger: GGACATGCTGGGACGAATCAAGAGCCTGCAAGCCCG...GAACAAGGGGCTGAGGCCGAACTGTCTGCATCTCATACTGGGACCTGCATGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | AGGGGGCAATACAATGCAAGTGAAGTGAGCCAGGATGGGCTCCATCCAGGGCCTGGCCGCAGCGTCTCCTaGAATTTCCTTTTGGCTACC | + |
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Preference number: 5 (lower is better) Translates to: RGQYNASEVSQDGLHPGPGRSVS*NFLLAT Trigger: GGTAGCCAAAAGGAAATTCAAGGAGACGCTGCGGCC...AGGCCCTGGATGGAGCCCATCCTGGCTCACTTCACTTGCATTGTATTGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGATGGTAGGACAGAGATTGGGCACCATAGGGCTGAGCAGGATTCAACCCACCTGCTTTTCCACCTaGACTACGCGCCCCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: MQMVGQRLGTIGLSRIQPTCFST*TTRPIM Trigger: CATGATGGGGCGCGTAGTCAAGGTGGAAAAGCAGGT...GGGTTGAATCCTGCTCAGCCCTATGGTGCCCAATCTCTGTCCTACCATCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCAATATGCAGCGCTGCCAATTGAAGTGAGAAAGTGGGGCAGAGACCGGATAAGGAGACACTCGTaGGCAAGTTCCTGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCQYAALPIEVRKWGRDRIRRHS*ASSWCS Trigger: GGAGCACCAGGAACTTGCCAACGAGTGTCTCCTTAT...CCGGTCTCTGCCCCACTTTCTCACTTCAATTGGCAGCGCTGCATATTGGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | TTGTGGTTCCTGGTGGTGGGCCACTGTCTGGTAGGTTTAGGGGAAATACAGGAAGAGGAGAAGTCAGAGTaGGCATCCTTCTCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LWFLVVGHCLVGLGEIQEEEKSE*ASFSAR Trigger: CCTGGCTGAGAAGGATGCCAACTCTGACTTCTCCTC...TTCCTGTATTTCCCCTAAACCTACCAGACAGTGGCCCACCACCAGGAACCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS-3UTR CAA 90 bp | TATCTCGCCCACCCAGACAGCTCAATACTGCGTATGGCCTCTCTCCCTGCCAGGTCCTTGAATTTCCTTTaGGCTACCAGGAACTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: YLAHPDSSILRMASLPARSLNFL*ATRNFR Trigger: TCTGAAGTTCCTGGTAGCCAAAAGGAAATTCAAGGA...CCTGGCAGGGAGAGAGGCCATACGCAGTATTGAGCTGTCTGGGTGGGCGAGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | GGAGAGCCGCCCCCGCCCGCCTCGCCCTGTTCACTCTaGACGGCCGTGAGCGCCACCAACTCCGCGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GEPPPPASPCSL*TAVSATNSARG Trigger: CCCCCGCGCGGAGTTGGTGGCGCTCACGGCCGTGCAGAGTGAACAGGGCGAGGCGGGCGGGGGCGGCTCTCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | CCATCCGGCTGCTTTCCCCAGGGCAGAAGGAGGCACTaGCTGGCCGGTGGCAGGTGGCAACGGGCGGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PSGCFPQGRRRH*LAGGRWQRAGS Trigger: GCTACCCGCCCGTTGCCACCTGCCACCGGCCAGGCAGTGCCTCCTTCTGCCCTGGGGAAAGCAGCCGGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CCA 72 bp | CAGGGCAGAAGGAGGCACTGCCTGGCCGGTGGCAGGTaGCAACGGGCGGGTAGCGAGAGGGCGCTCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: QGRRRHCLAGGR*QRAGSERALHQ Trigger: CTGATGGAGCGCCCTCTCGCTACCCGCCCGTTGCCACCTGCCACCGGCCAGGCAGTGCCTCCTTCTGCCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | CTGCTTGGCGAGGTGGGAATCGGCGGAGGGGCCAGATaGTGCTTGGAGGGGCCTGTCCGCTTCTGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLGEVGIGGGAR*CLEGPVRFWEL Trigger: CAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGCCAAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | CTTGGCGAGGTGGGAATCGGCGGAGGGGCCAGATGCTaGTTGGAGGGGCCTGTCCGCTTCTGGGAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LGEVGIGGGARC*LEGPVRFWELL Trigger: AAGCAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGCCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CCA 72 bp | GCGAGGTGGGAATCGGCGGAGGGGCCAGATGCTGCTTaGAGGGGCCTGTCCGCTTCTGGGAGCTGCTTATGC | + |
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Preference number: 6 (lower is better) Translates to: ARWESAEGPDAA*RGLSASGSCLC Trigger: GCATAAGCAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CCA 72 bp | CGAGTCTTGCGGTCCCCAGGGCCCCGACCCACAATTTaGTCCACCCGGGCTTGCAGGCTCTTGATTCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RVLRSPGPRPTI*STRACRLLIRP Trigger: GGGACGAATCAAGAGCCTGCAAGCCCGGGTGGACCAAATTGTGGGTCGGGGCCCTGGGGACCGCAAGACTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 72 bp | CCGAGTCTTGCGGTCCCCAGGGCCCCGACCCACAATTaGGTCCACCCGGGCTTGCAGGCTCTTGATTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSLAVPRAPTHN*VHPGLQALDSS Trigger: GGACGAATCAAGAGCCTGCAAGCCCGGGTGGACCAAATTGTGGGTCGGGGCCCTGGGGACCGCAAGACTCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 90 bp | TCAGGTACTGGCGCCCGCCTCACCTCCAGGGGCCGTAAGCCCCCATaGCGGGCCCGTTGTATGTGCTCAAACAAGAGGGCCAGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SGTGARLTSRGRKPP*RARCMCSNKRASSL Trigger: CAGAGAGCTGGCCCTCTTGTTTGAGCACATACAACGGGCCCGCAATGGGGGCTTACGGCCCCTGGAGGTGAGGCGGGCGCCAGTACCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 90 bp | TCACTGCTTGGCGAGGTGGGAATCGGCGGAGGGGCCAGATGCTGCTaGGAGGGGCCTGTCCGCTTCTGGGAGCTGCTTATGCGGATTCGG | + |
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Preference number: 6 (lower is better) Translates to: SLLGEVGIGGGARCC*EGPVRFWELLMRIR Trigger: CCGAATCCGCATAAGCAGCTCCCAGAAGCGGACAGGCCCCTCCAAGCAGCATCTGGCCCCTCCGCCGATTCCCACCTCGCCAAGCAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 90 bp | GAGGGGCCTGTCCGCTTCTGGGAGCTGCTTATGCGGATTCGGTCTTaGATGCCCATCCGGCTGCTTTCCCCAGGGCAGAAGGAGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: EGPVRFWELLMRIRS*MPIRLLSPGQKEAL Trigger: CAGTGCCTCCTTCTGCCCTGGGGAAAGCAGCCGGATGGGCATCAAAGACCGAATCCGCATAAGCAGCTCCCAGAAGCGGACAGGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS TCA 72 bp | CTCACACTGGTAGCTCTTCTCCTCGGCCACTTCCTCTaGGGGGCCCTCCTCAGCAGAGCAGCGAGGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LTLVALLLGHFL*GALLSRAARLE Trigger: CTCAAGCCTCGCTGCTCTGCTGAGGAGGGCCCCTCAGAGGAAGTGGCCGAGGAGAAGAGCTACCAGTGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CCA 72 bp | CGGCTTGTGTCCGTGGAGTACAGGCGCCACGCAGCCTaGATGAGATTAGCTGCTGGCATCCTGCGCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RLVSVEYRRHAA*MRLAAGILRFS Trigger: TGAGAAGCGCAGGATGCCAGCAGCTAATCTCATCCAGGCTGCGTGGCGCCTGTACTCCACGGACACAAGCCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS TCA 72 bp | TCCGCTTCTGGGAGCTGCTTATGCGGATTCGGTCTTTaGTGCCCATCCGGCTGCTTTCCCCAGGGCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SASGSCLCGFGL*CPSGCFPQGRR Trigger: CCTTCTGCCCTGGGGAAAGCAGCCGGATGGGCATCAAAGACCGAATCCGCATAAGCAGCTCCCAGAAGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | AGATGCCCAGTAAGGCGAAGCCGGCAGCCAGAACCCTaGCCAGCCATGTATGTGGCGTCTTGTCACCATAGC | + |
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Preference number: 6 (lower is better) Translates to: RCPVRRSRQPEP*PAMYVASCHHS Trigger: GCTATGGTGACAAGACGCCACATACATGGCTGGGCAGGGTTCTGGCTGCCGGCTTCGCCTTACTGGGCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | AGGGGCCGTAAGCCCCCATTGCGGGCCCGTTGTATGTaGTCAAACAAGAGGGCCAGCTCTCTGAAAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGRKPPLRARCM*SNKRASSLKDG Trigger: CCCATCTTTCAGAGAGCTGGCCCTCTTGTTTGAGCACATACAACGGGCCCGCAATGGGGGCTTACGGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 72 bp | CATACTGCGCAACGCGGACGTAGCAAAGATGTTGCCTaGTGTGCCCGCAGCTATCACTGCCACCGAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HTAQRGRSKDVA*CARSYHCHRGH Trigger: GTGGCCTCGGTGGCAGTGATAGCTGCGGGCACACAAGGCAACATCTTTGCTACGTCCGCGTTGCGCAGTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 72 bp | GTCCGCTTCTGGGAGCTGCTTATGCGGATTCGGTCTTaGATGCCCATCCGGCTGCTTTCCCCAGGGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VRFWELLMRIRS*MPIRLLSPGQK Trigger: CTTCTGCCCTGGGGAAAGCAGCCGGATGGGCATCAAAGACCGAATCCGCATAAGCAGCTCCCAGAAGCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 90 bp | ATCTGTAGGAAGCGCATACTGCGCAACGCGGACGTAGCAAAGATGTaGCCTTGTGTGCCCGCAGCTATCACTGCCACCGAGGCCACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ICRKRILRNADVAKM*PCVPAAITATEATN Trigger: GTTCGTGGCCTCGGTGGCAGTGATAGCTGCGGGCACACAAGGCAACATCTTTGCTACGTCCGCGTTGCGCAGTATGCGCTTCCTACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 72 bp | CATAGTAATACCAGGTGGCTGTCAAATAGGCCCGGCTaGTGTCCGTGGAGTACAGGCGCCACGCAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HSNTRWLSNRPG*CPWSTGATQPG Trigger: TCCAGGCTGCGTGGCGCCTGTACTCCACGGACACAAGCCGGGCCTATTTGACAGCCACCTGGTATTACTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | AGCAAAGATGTTGCCTTGTGTGCCCGCAGCTATCACTaGCACCGAGGCCACGAACACGATGAAGTCGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: SKDVALCARSYH*HRGHEHDEVDD Trigger: GTCATCGACTTCATCGTGTTCGTGGCCTCGGTGGCAGTGATAGCTGCGGGCACACAAGGCAACATCTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CCA 72 bp | ACCAGAGCGAGTCGGCATAGGAGGAGAAGTCAGAGTTaGCATCCTTCTCAGCCAGGTAGACCAGGAAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRASRHRRRSQS*HPSQPGRPGKR Trigger: CCTCTTTCCTGGTCTACCTGGCTGAGAAGGATGCCAACTCTGACTTCTCCTCCTATGCCGACTCGCTCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS GCA 72 bp | AAGCCCAGCAGCAGATCCAACTTATGTTCGATGGACTaGACCTGCTTTTCCACCTTGACTACGCGCCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: KPSSRSNLCSMD*TCFSTLTTRPI Trigger: GATGGGGCGCGTAGTCAAGGTGGAAAAGCAGGTGCAGTCCATCGAACATAAGTTGGATCTGCTGCTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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| CDS CAA 72 bp | ACAATCATCACGAATTCCAAGATAAGGAGACACTCGTaGGCAAGTTCCTGGTGCTCCTGGATGGTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: TIITNSKIRRHS*ASSWCSWMVDS Trigger: ACTGTCCACCATCCAGGAGCACCAGGAACTTGCCAACGAGTGTCTCCTTATCTTGGAATTCGTGATGATTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030376.8 |
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