Pregenerated sensors for KCNQ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009545Ensembl transcript IDs: ENSMUST00000009689.11, ENSMUST00000185383.2, ENSMUST00000186284.7, ENSMUST00000186488.7, ENSMUST00000186798.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCAGTTAGTGTGGGCCGGGCCTGTCTTGCCCTGCACGTTCCCTaGTGGTCTCTGGATTCAGGGCTGAGGGTGGAAACCCCAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: PAVSVGRACLALHVP*WSLDSGLRVETPDS Trigger: AGAGTCTGGGGTTTCCACCCTCAGCCCTGAATCCAGAGACCATCAGGGAACGTGCAGGGCAAGACAGGCCCGGCCCACACTAACTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR TCA 90 bp | CCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTaGTATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: PRQVLVPTGWAEGCW*YPDPGQWLGPWVSG Trigger: CCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR TCA 90 bp | GTTCGTAGGTGGGCAGGCTGTTGCTGGGTAGGAAGAGCTCAGGGTTaGTGGAGCCACCTTCATTGCTGGCTACAACTTGTGACCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VRRWAGCCWVGRAQG*WSHLHCWLQLVTCC Trigger: ACAGCAGGTCACAAGTTGTAGCCAGCAATGAAGGTGGCTCCATCAACCCTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCTACGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR TCA 90 bp | GAGCTCAGGGTTGATGGAGCCACCTTCATTGCTGGCTACAACTTGTaGCCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ELRVDGATFIAGYNL*PAVAGWTTLLHGQQ Trigger: CTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAGCAATGAAGGTGGCTCCATCAACCCTGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR TCA 90 bp | TGTTCCAGCCATCAGAAGAGCAGCATCAACATCTTGATAGGGGCCTaGGAGGAACCCCATGCCCAGACAAGTTCTAGTTCCCACTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CSSHQKSSINILIGA*EEPHAQTSSSSHWL Trigger: CAGCCAGTGGGAACTAGAACTTGTCTGGGCATGGGGTTCCTCTCAGGCCCCTATCAAGATGTTGATGCTGCTCTTCTGATGGCTGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CCA 90 bp | GAAGAATCGGTGATGCCCCTAACTTCAATGTGGCGTGAAAGAGGCTaGAGTCTGAGCATTGGTCCAGCACCTCTGACCAGCAAGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: EESVMPLTSMWRERG*SLSIGPAPLTSKKE Trigger: CTCCTTCTTGCTGGTCAGAGGTGCTGGACCAATGCTCAGACTCCAGCCTCTTTCACGCCACATTGAAGTTAGGGGCATCACCGATTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCCCACTGGGCTACAGCCTGCAGTTAGTGTGGGCCGGGCCTGTCTTGCCCTGGGTGTGCCCCTGTTaGGAGGGAGGTGGGGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: ELPLGYSLQLVWAGPVLPWVCPC*EGGGAD Trigger: GTCTGCCCCACCTCCCTCTCAACAGGGGCACACCCA...GGGCAAGACAGGCCCGGCCCACACTAACTGCAGGCTGTAGCCCAGTGGGAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCCCACTGGGCTACAGCCTGCAGTTAGTGTGGGCCGGGCCTGTCTTGCCCCTCTGGATTCAGGGCTaGGGGTGGAAACCCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: ELPLGYSLQLVWAGPVLPLWIQG*GWKPQT Trigger: AGTCTGGGGTTTCCACCCTCAGCCCTGAATCCAGAG...GGGCAAGACAGGCCCGGCCCACACTAACTGCAGGCTGTAGCCCAGTGGGAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CAA 90 bp | GCTGGGCAGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTaGGCCCATGGGTTTCGGGGCCTTAGGGAGCTAGGCTGTCATATC | + |
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Preference number: 2 (lower is better) Translates to: AGQRGVGDIQIQASG*AHGFRGLRELGCHI Trigger: GATATGACAGCCTAGCTCCCTAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCTGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTCCATCCAGGCCAGTGGCTTaGCCCATGGGTTTCGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LCLSCILLYTYTPHPYVPSRPVA*PMGFGA Trigger: GGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGA...TGGAACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR CCA 90 bp | CTCATCAGGGCCTGTCTGGGGCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTTGCATGGACAGCAGCTaGTGGAGCATGTCTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: LIRACLGHSQLFVGGQAVCMDSS*WSMSVM Trigger: CATCACAGACATGCTCCACCAGCTGCTGTCCATGCA...AACAGCCTGCCCACCTACGAACAACTGACTGTGCCCCAGACAGGCCCTGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTAGGCCTTCAAGGGGGTaGGAACCAGGTGGGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLCLSCILLYTYTPHPYVRPSRG*EPGGCA Trigger: GGCACACCCACCTGGTTCTCACCCCCTTGAAGGCCT...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATCCAGATCCAGGCCAGTaGCTTGGCCCATGGGTTTCG | + |
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Preference number: 2 (lower is better) Translates to: ASLCLSCILLYTYTPHPYPDPGQ*LGPWVS Trigger: CGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGG...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CAA 90 bp | TTGATGGAGCCACCTTCATTGCTGGCTACAACTTGTGACCTGCTGTaGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LMEPPSLLATTCDLL*QVGPPCCMDSSWWS Trigger: GCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAGCAATGAAGGTGGCTCCATCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATATCTTGATAGGGGCCTaGGAGGAACCCCATGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ASLCLSCILLYTYTPHPYILIGA*EEPHAQ Trigger: CTGGGCATGGGGTTCCTCTCAGGCCCCTATCAAGAT...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATAGGGCTTCCCTCTGCCTaGGCTGCATCCTGCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: EGGNPRLFLFPFRKPLGIGLPSA*AASCFT Trigger: TGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGCCC...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR CCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGAGTTCTAGTTCCCACTaGCTGGGCAGAGGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWSSSSH*LGRGVL Trigger: CAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACT...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CCA 72 bp | GCTGAGCTCCCACTGGGCTACAGCCTGCAGTTAGTGTaGGCCGGGCCTGTCTTGCCCTGCACGTTCCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: AELPLGYSLQLV*AGPVLPCTFPD Trigger: ATCAGGGAACGTGCAGGGCAAGACAGGCCCGGCCCACACTAACTGCAGGCTGTAGCCCAGTGGGAGCTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR TCA 72 bp | AGTGTGGGCCGGGCCTGTCTTGCCCTGCACGTTCCCTaGTGGTCTCTGGATTCAGGGCTGAGGGTGGAAACC | + |
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Preference number: 3 (lower is better) Translates to: SVGRACLALHVP*WSLDSGLRVET Trigger: GGTTTCCACCCTCAGCCCTGAATCCAGAGACCATCAGGGAACGTGCAGGGCAAGACAGGCCCGGCCCACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR CAA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGTGGGTGTGCCCCTGTaGAGAGGGAGGTGGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RGVLVISRSRPVAWPMGFVGVPL*RGRWGR Trigger: TCTGCCCCACCTCCCTCTCAACAGGGGCACACCCAC...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR TCA 72 bp | GTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTaGTATCCAGATCCAGGCCAGTGGCTTGGCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: VLVPTGWAEGCW*YPDPGQWLGPW Trigger: CCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR-3UTR CAA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGATCCAGGCCAGTGGCTaGGCCCATGGGTTTCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWIQASG*AHGFRG Trigger: GCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGAT...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CCA 72 bp | GAGGAACCCCATGCCCAGACAAGTTCTAGTTCCCACTaGCTGGGCAGAGGGGTGTTGGTGATATCCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: EEPHAQTSSSSH*LGRGVLVISRS Trigger: GGATCTGGATATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATGGGGTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CCA 72 bp | GTGATGCCCCTAACTTCAATGTGGCGTGAAAGAGGCTaGAGTCTGAGCATTGGTCCAGCACCTCTGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: VMPLTSMWRERG*SLSIGPAPLTS Trigger: GCTGGTCAGAGGTGCTGGACCAATGCTCAGACTCCAGCCTCTTTCACGCCACATTGAAGTTAGGGGCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CCA 72 bp | CAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTaGAGCATGTCTGTGATGATCACCAGTCTCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: QVGPPCCMDSSW*SMSVMITSLWS Trigger: GGACCAGAGACTGGTGATCATCACAGACATGCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR CCA 72 bp | CTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATaGGCTTCCCTCTGCCTGAGCTGCATCCTGCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: LFPFRKPLGIPG*ASLCLSCILLY Trigger: GTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGCCCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR GCA 72 bp | CTTGGCATACCTGGATGGGCTTCCCTCTGCCTGAGCTaGATCCTGCTTTACACATATACTCCCCATCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: LGIPGWASLCLS*ILLYTYTPHPY Trigger: ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGCCCATCCAGGTATGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR GCA 72 bp | TGGAGCCACCTTCATTGCTGGCTACAACTTGTGACCTaGTGTTGCAGGTTGGACCACCTTGTTGCATGGACA | + |
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Preference number: 3 (lower is better) Translates to: WSHLHCWLQLVT*CCRLDHLVAWT Trigger: TGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAGCAATGAAGGTGGCTCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR TCA 72 bp | CATCAGAAGAGCAGCATCAACATCTTGATAGGGGCCTaGGAGGAACCCCATGCCCAGACAAGTTCTAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: HQKSSINILIGA*EEPHAQTSSSS Trigger: GGAACTAGAACTTGTCTGGGCATGGGGTTCCTCTCAGGCCCCTATCAAGATGTTGATGCTGCTCTTCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CCA 72 bp | ATCCTGGAAGAATCGGTGATGCCCCTAACTTCAATGTaGCGTGAAAGAGGCTGGAGTCTGAGCATTGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: ILEESVMPLTSM*RERGWSLSIGP Trigger: TGGACCAATGCTCAGACTCCAGCCTCTTTCACGCCACATTGAAGTTAGGGGCATCACCGATTCTTCCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR GCA 72 bp | ATCACCAGAAATTATCTTGATTTCTGTGAGGCGTGGTaGCCAAGCCCAAGGAACCAATCCTGGAAGAATCGG | + |
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Preference number: 3 (lower is better) Translates to: ITRNYLDFCEAW*PSPRNQSWKNR Trigger: CCGATTCTTCCAGGATTGGTTCCTTGGGCTTGGGCACCACGCCTCACAGAAATCAAGATAATTTCTGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GAGCTCCCACTGGGCTACAGCCTGCAGTTAGTGTGGGCCGGGCCTGTCTTGCCCACTCGGCCCTGGATGTaGGTGCGCGCCAGCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: ELPLGYSLQLVWAGPVLPTRPWM*VRASSG Trigger: CCCGCTGCTGGCGCGCACCCACATCCAGGGCCGAGT...GGGCAAGACAGGCCCGGCCCACACTAACTGCAGGCTGTAGCCCAGTGGGAGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GGTGAGAACCAGGTGGGTGTGCCCCTGTTGAGAGGGAGGTGGGGCAGACCTGTGAGAAGAGGGTCCCGGTaGCCAGAGCGGCATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: GENQVGVPLLRGRWGRPVRRGSR*PERHTA Trigger: AGCAGTATGCCGCTCTGGCCACCGGGACCCTCTTCT...CACAGGTCTGCCCCACCTCCCTCTCAACAGGGGCACACCCACCTGGTTCTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCAGAAGGGACACTTCTTaGCCACCGCGCTGCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: RGVLVISRSRPVAWPMGFRRDTS*PPRCPA Trigger: GGCGGGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCT...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | GGTGAGAACCAGGTGGGTGTGCCCCTGTTGAGAGGGAGGTGGGGCAGACCTGTGCAATGTACAGGGTGGTaGTCAGCTCCTGGCGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GENQVGVPLLRGRWGRPVQCTGW*SAPGGE Trigger: TTCACCGCCAGGAGCTGATCACCACCCTGTACATTG...CACAGGTCTGCCCCACCTCCCTCTCAACAGGGGCACACCCACCTGGTTCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | GCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTGCTGGGTAGGAAGAGCTCAGGTAGCCGGCCCCAGATaGCCACGTACTTGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: AQSVVRRWAGCCWVGRAQVAGPR*PRTCCG Trigger: GCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTAC...CTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCTACGAACAACTGACTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR GCA 90 bp | GGTGAGAACCAGGTGGGTGTGCCCCTGTTGAGAGGGAGGTGGGGCAGACCTGTGTTCTGCCTCTGCTTCTaGTGGACCTTCAGCGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: GENQVGVPLLRGRWGRPVFCLCF*WTFSAN Trigger: GTTCGCGCTGAAGGTCCAGCAGAAGCAGAGGCAGAA...CACAGGTCTGCCCCACCTCCCTCTCAACAGGGGCACACCCACCTGGTTCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACACTCGGCCCTGGATGTaGGTGCGCGCCAGCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LATTCDLLLQVGPPCCMDTRPWM*VRASSG Trigger: CCCGCTGCTGGCGCGCACCCACATCCAGGGCCGAGT...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| 3UTR CAA 72 bp | AGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTaGGCCCATGGGTTTCGGGGCCTTAGGGAGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGVGDIQIQASG*AHGFRGLRELG Trigger: GCCTAGCTCCCTAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CAA 72 bp | GGCTACAGCCTGCAGTTAGTGTGGGCCGGGCCTGTCTaGCCCTGCACGTTCCCTGATGGTCTCTGGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: GYSLQLVWAGPV*PCTFPDGLWIQ Trigger: CTGAATCCAGAGACCATCAGGGAACGTGCAGGGCAAGACAGGCCCGGCCCACACTAACTGCAGGCTGTAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATACTTGCTGCGGCAGCCTaGAGACCAGAGGCGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: HAQTSSSSHWLGRGVLVILAAAA*RPEADH Trigger: GTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAG...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CTCATCAGGGCCTGTCTGGGGCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTAGAAGAGGGTCCCGGTaGCCAGAGCGGCATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LIRACLGHSQLFVGGQAVRRGSR*PERHTA Trigger: AGCAGTATGCCGCTCTGGCCACCGGGACCCTCTTCT...AACAGCCTGCCCACCTACGAACAACTGACTGTGCCCCAGACAGGCCCTGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR TCA 90 bp | CTCATCAGGGCCTGTCTGGGGCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTAGCATCCGCAGGATCTaGAGGAAGCGGATACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LIRACLGHSQLFVGGQAVSIRRI*RKRIPL Trigger: CAGGGGTATCCGCTTCCTTCAGATCCTGCGGATGCT...AACAGCCTGCCCACCTACGAACAACTGACTGTGCCCCAGACAGGCCCTGATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR TCA 90 bp | GACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCTCCATGCAGTCTGGATaGGTGAGGCTGCAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: DLLLQVGPPCCMDSSWWSSMQSG*VRLQLG Trigger: TCCCAGCTGCAGCCTCACTCATCCAGACTGCATGGA...GCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR TCA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACGGGGACAGAAGCGTGTaGCTCCGAGCAGGCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LATTCDLLLQVGPPCCMDGDRSV*LRAGFR Trigger: CCGGAAGCCTGCTCGGAGTCACACGCTTCTGTCCCC...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR GCA 90 bp | GCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTGCTGGGTAGGAAGAGCTCAGTGCCCACGTACTTGCTaGGGCAGCCTGCAGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQSVVRRWAGCCWVGRAQCPRTC*GSLQTR Trigger: TCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCA...CTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCTACGAACAACTGACTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR CCA 90 bp | CTCATCAGGGCCTGTCTGGGGCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTTGCCTCTGCTTCTGCTaGACCTTCAGCGCGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: LIRACLGHSQLFVGGQAVCLCFC*TFSANP Trigger: TGGGTTCGCGCTGAAGGTCCAGCAGAAGCAGAGGCA...AACAGCCTGCCCACCTACGAACAACTGACTGTGCCCCAGACAGGCCCTGATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR TCA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTACTGGGATCTGCCGGTTaGAGTGCTTCTGCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVISRSRPVAWPMGFGALLGSAG*SASASA Trigger: AGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCAG...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR TCA 90 bp | GCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTGCTGGGTAGGAAGAGCTCAGCTGGGATCTGCCGGTTaGAGTGCTTCTGCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSVVRRWAGCCWVGRAQLGSAG*SASASA Trigger: AGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCAG...CTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCTACGAACAACTGACTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR TCA 90 bp | GTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGATGCAGTCTGGATGAGTaGGGCTGCAGCTGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTCCCRLDHLVAWTAAGGCSLDE*GCSWDL Trigger: CAGATCCCAGCTGCAGCCTCACTCATCCAGACTGCA...TCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR TCA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGGGGACAGAAGCGTGTaGCTCCGAGCAGGCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLCLSCILLYTYTPHPYGDRSV*LRAGFR Trigger: CCGGAAGCCTGCTCGGAGTCACACGCTTCTGTCCCC...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | CTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCACTTGCTGCGGCAGCCTaGAGACCAGAGGCGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQLVTCCCRLDHLVAWTALAAAA*RPEADH Trigger: GTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAG...TGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR GCA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATAAGATGCCCACGTACTTaGTGCGGCAGCCTGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HAQTSSSSHWLGRGVLVIRCPRT*CGSLQT Trigger: GGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCT...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | ACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGAGATGCCCACGTACTTaGTGCGGCAGCCTGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TCDLLLQVGPPCCMDSSWRCPRT*CGSLQT Trigger: GGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCT...CCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTAGCCGGCCCCAGATaGCCACGTACTTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLCLSCILLYTYTPHPYVAGPR*PRTCCG Trigger: GCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTAC...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATAGAGCATCTGCGTAGCTaGCAAACTCGATGCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HAQTSSSSHWLGRGVLVIEHLRS*QTRCGR Trigger: CCGGCCGCATCGAGTTTGGCAGCTACGCAGATGCTC...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCACCCGGGGGCTCCGGTTaGCGCGATGGGCGCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAAPGGSG*RDGRID Trigger: GTCTATGCGCCCATCGCGCCAACCGGAGCCCCCGGG...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCTGCCTCTGCTTCTGCTaGACCTTCAGCGCGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVLVISRSRPVAWPMGFCLCFC*TFSANP Trigger: TGGGTTCGCGCTGAAGGTCCAGCAGAAGCAGAGGCA...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GGTGAGAACCAGGTGGGTGTGCCCCTGTTGAGAGGGAGGTGGGGCAGACCTGTGGGCTTCCGTGCTTGCTaGAATTTCTTCTTGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GENQVGVPLLRGRWGRPVGFRAC*NFFLAT Trigger: TGTAGCCAAGAAGAAATTCCAGCAAGCACGGAAGCC...CACAGGTCTGCCCCACCTCCCTCTCAACAGGGGCACACCCACCTGGTTCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR TCA 90 bp | GGTGAGAACCAGGTGGGTGTGCCCCTGTTGAGAGGGAGGTGGGGCAGACCTGTGTTTCTGAGATGGGGATaGACAAAGATGGCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GENQVGVPLLRGRWGRPVFLRWG*TKMASQ Trigger: TTGGGAAGCCATCTTTGTTCATCCCCATCTCAGAAA...CACAGGTCTGCCCCACCTCCCTCTCAACAGGGGCACACCCACCTGGTTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCTGCCAAACTCGATaGGGCCGGACTCGTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LATTCDLLLQVGPPCCMDSCQTR*GRTRSP Trigger: CGGTGAACGAGTCCGGCCGCATCGAGTTTGGCAGCT...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CCA 90 bp | GACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCAGAAACAGGAGGCGATaGTCTTCCCAACCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLLQVGPPCCMDSSWWSRNRRR*SSQPTS Trigger: AGACGTGGGTTGGGAAGACCATCGCCTCCTGTTTCT...GCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR CCA 90 bp | GCACAGTCAGTTGTTCGTAGGTGGGCAGGCTGTTGCTGGGTAGGAAGAGCTCAGCACCTCCATGCAGTCTaGATGAGTGAGGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSVVRRWAGCCWVGRAQHLHAV*MSEAAA Trigger: AGCTGCAGCCTCACTCATCCAGACTGCATGGAGGTG...CTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCTACGAACAACTGACTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACGCTCCTGGCGGTGAATaGAGACTACAGAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LATTCDLLLQVGPPCCMDAPGGE*RLQSPG Trigger: TCCTGGGCTCTGTAGTCTTCATTCACCGCCAGGAGC...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGCAATGTACAGGGTGGTaGTCAGCTCCTGGCGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCDLLLQVGPPCCMDSSWQCTGW*SAPGGE Trigger: TTCACCGCCAGGAGCTGATCACCACCCTGTACATTG...CCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR GCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCAGCGCATAGACCGTGCTaGCCTCAGGGCCACCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAAAHRPC*PQGHLR Trigger: CCGAAGGTGGCCCTGAGGGCAGCACGGTCTATGCGC...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATATGCCCACGTACTTGCTaGGGCAGCCTGCAGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGICPRTC*GSLQTR Trigger: TCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCA...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGAGCATCTGCGTAGCTaGCAAACTCGATGCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLVTCCCRLDHLVAWTAEHLRS*QTRCGR Trigger: CCGGCCGCATCGAGTTTGGCAGCTACGCAGATGCTC...TGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR GCA 90 bp | GTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAATCTGCCGGTTGAAGTaGTTCTGCCTCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTCCCRLDHLVAWTAAGGICRLK*FCLCFC Trigger: GCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGAT...TCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGGCTGCAGCTGGGATCTaGCGGTTGAAGTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWLQLVTCCCRLDHLVAWAAAGI*RLKCFC Trigger: GCAGAAGCACTTCAACCGGCAGATCCCAGCTGCAGC...CCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCAGAAACAGGAGGCGATaGTCTTCCCAACCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGVLVISRSRPVAWPMGFRNRRR*SSQPTS Trigger: AGACGTGGGTTGGGAAGACCATCGCCTCCTGTTTCT...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATAAGCATCCGCAGGATCTaGAGGAAGCGGATACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGISIRRI*RKRIPL Trigger: CAGGGGTATCCGCTTCCTTCAGATCCTGCGGATGCT...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATAGCTCCTGGCGGTGAATaGAGACTACAGAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGIAPGGE*RLQSPG Trigger: TCCTGGGCTCTGTAGTCTTCATTCACCGCCAGGAGC...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR TCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGGGGAGTACTGCTCGATaGCATCTCGCACGTCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWGSTAR*HLARRR Trigger: CCTACGACGTGCGAGATGTCATCGAGCAGTACTCCC...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTAGCTGCCAAACTCGATaGGGCCGGACTCGTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVSCQTR*GRTRSP Trigger: CGGTGAACGAGTCCGGCCGCATCGAGTTTGGCAGCT...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCATGTATCCCCGCTGGGAGTaGAAAGAAGGATATGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQVGPPCCMDSSWWSMYPRWE*KEGYGE Trigger: TTCGCCATATCCTTCTTTGCACTCCCAGCGGGGATA...CATGCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACTTCTGCCTCTGCTTCTaGTGGACCTTCAGCGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LATTCDLLLQVGPPCCMDFCLCF*WTFSAN Trigger: GTTCGCGCTGAAGGTCCAGCAGAAGCAGAGGCAGAA...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR GCA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGCTGCAGCTGGGATCTaGCGGTTGAAGTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLCLSCILLYTYTPHPYAAAGI*RLKCFC Trigger: GCAGAAGCACTTCAACCGGCAGATCCCAGCTGCAGC...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTACTTGTGACCTGCTGTTaGAGGTTGGACCACCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVISRSRPVAWPMGFGALLVTCC*RLDHLV Trigger: AACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAG...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAACACTTCCAACCCGTaGGGCGCTCGAGGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LATTCDLLLQVGPPCCMDNTSNP*GARGSC Trigger: ACAACTTCCTCGAGCGCCCCACGGGTTGGAAGTGTT...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CCA 90 bp | GACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCCATAGATCTTCCAAGTaGCTGAGTCAGGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLLLQVGPPCCMDSSWWSHRSSK*LSQGSQ Trigger: CTGAGAACCCTGACTCAGCCACTTGGAAGATCTATG...GCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR CCA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTAATGGACAGCAGCTGGTaGAGCATGTCTGTGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVISRSRPVAWPMGFGALMDSSW*SMSVMI Trigger: GATCATCACAGACATGCTCCACCAGCTGCTGTCCAT...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATATGCATGGACAGCAGCTaGTGGAGCATGTCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HAQTSSSSHWLGRGVLVICMDSS*WSMSVM Trigger: CATCACAGACATGCTCCACCAGCTGCTGTCCATGCA...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATATGGGCAGGCTGTTGCTaGGTAGGAAGAGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGIWAGCC*VGRAQG Trigger: ACCCTGAGCTCTTCCTACCCAGCAACAGCCTGCCCA...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| 3UTR CAA 72 bp | CCACCTTCATTGCTGGCTACAACTTGTGACCTGCTGTaGCAGGTTGGACCACCTTGTTGCATGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLLATTCDLL*QVGPPCCMDSS Trigger: GCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAGCAATGAAGGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTTGCAGTCTGGATGAGTaGGGCTGCAGCTGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVCSLDE*GCSWDL Trigger: CAGATCCCAGCTGCAGCCTCACTCATCCAGACTGCA...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTTCCATGCAGTCTGGATaGGTGAGGCTGCAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVSMQSG*VRLQLG Trigger: TCCCAGCTGCAGCCTCACTCATCCAGACTGCATGGA...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTATTGGCTACAAAGTACTaGATGCGCCTGATGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVISRSRPVAWPMGFGALLATKY*MRLMTL Trigger: CAAGGTCATCAGGCGCATGCAGTACTTTGTAGCCAA...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTAGGTGGGCAGGCTGTTaGTGGGTAGGAAGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVRWAGC*WVGRAQ Trigger: CTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCT...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGAACACTTCCAACCCGTaGGGCGCTCGAGGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWNTSNP*GARGSC Trigger: ACAACTTCCTCGAGCGCCCCACGGGTTGGAAGTGTT...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | ACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGCGAACACTTGTCCTTTaGAACCCACGCAGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TCDLLLQVGPPCCMDSSWRTLVL*NPRRGQ Trigger: TTGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCG...CCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCATGTGTCATAGCCATCAATaGAGAAATGGTCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQVGPPCCMDSSWWSMCHSHQ*RNGLAS Trigger: GGAGGCCAGACCATTTCTCCATTGATGGCTATGACA...CATGCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTCGCAGCTGTGACACATaGGTGATGGGGGTCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVRSCDT*VMGVSS Trigger: ACTGCTGACCCCCATCACCCATGTGTCACAGCTGCG...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTAGGGGATGAACAAAGATaGCTTCCCAATGGACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVISRSRPVAWPMGFGALGDEQR*LPNGLI Trigger: GATCAGTCCATTGGGAAGCCATCTTTGTTCATCCCC...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGGGCTTCCCAATGGACTaGTCCAGCCTTCTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWGFPMD*SSLLCS Trigger: ACTACAGAGAAGGCTGGATCAGTCCATTGGGAAGCC...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGATCTGCCGGTTGAAGTaGTTCTGCCTCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWICRLK*FCLCFC Trigger: GCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGAT...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCATGGCCCTGGGAGTACTaGTCGATGACATCTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAAWPWEY*SMTSRT Trigger: CGTGCGAGATGTCATCGAGCAGTACTCCCAGGGCCA...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTCACCTCCATGCAGTCTaGATGAGTGAGGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVHLHAV*MSEAAA Trigger: AGCTGCAGCCTCACTCATCCAGACTGCATGGAGGTG...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTCCAACCATAAGGTTCAGGTaGCCCTGGGAGTACTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCLSCILLYTYTPHPYVPTIRFR*PWEYCS Trigger: CGAGCAGTACTCCCAGGGCCACCTGAACCTTATGGT...TGGAACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGCTGTTGCAGGTTaGACCACCTTGTTGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGIPAVAG*TTLLHG Trigger: TCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGG...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCAGCTGGCTACAACTTGTaGCCTGCTGTTGCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAAAGYNL*PAVAGW Trigger: CCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAGC...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCATCAGACGGGCACCGATaGTGTTACTGCCACGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAASDGHR*CYCHGL Trigger: AAGACCGTGGCAGTAACACCATCGGTGCCCGTCTGA...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATAAGCCACCTTCATTGCTaGCTACAACTTGTGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGISHLHC*LQLVTC Trigger: GCAGGTCACAAGTTGTAGCCAGCAATGAAGGTGGCT...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATAGTCTTTGCTCTTTTCTaGGATGGGGATGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HAQTSSSSHWLGRGVLVIVFALF*DGDEQR Trigger: TCTTTGTTCATCCCCATCTCAGAAAAGAGCAAAGAC...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTCCATATCCCCGCTGGGAGTaGAAAGAAGGATATGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLSCILLYTYTPHPYVPYPRWE*KEGYGE Trigger: TTCGCCATATCCTTCTTTGCACTCCCAGCGGGGATA...TGGAACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACATAGATCTTCCAAGTaGCTGAGTCAGGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGGNPRLFLFPFRKPLGIHRSSK*LSQGSQ Trigger: CTGAGAACCCTGACTCAGCCACTTGGAAGATCTATG...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGTGTCATAGCCATCAATaGAGAAATGGTCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWCHSHQ*RNGLAS Trigger: GGAGGCCAGACCATTTCTCCATTGATGGCTATGACA...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATAAGATGGCTTCCCAATaGACTGATCCAGCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLCLSCILLYTYTPHPYKMASQ*TDPAFS Trigger: AGAGAAGGCTGGATCAGTCCATTGGGAAGCCATCTT...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGATGATCACCAGTCTCTaGTCCAGTTGTGTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWMITSL*SSCVTL Trigger: CAAGGTGACACAACTGGACCAGAGACTGGTGATCAT...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTCCAGTCGTAGGGCTTCCGTaGTTGCTGGAATTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLSCILLYTYTPHPYVPVVGLP*LLEFLL Trigger: AAGAAGAAATTCCAGCAAGCACGGAAGCCCTACGAC...TGGAACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCACGAACACTTGTCCTTTaGAACCCACGCAGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAARTLVL*NPRRGQ Trigger: TTGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCG...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR GCA 90 bp | CTGCTTTACACATATACTCCCCATCCCTATGTTCCAGCCATCAGAAGAGCAGCACACCGATGGTGTTACTaGCACGGTCTTTGCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLYTYTPHPYVPAIRRAAHRWCY*HGLCSF Trigger: AAAAGAGCAAAGACCGTGGCAGTAACACCATCGGTG...TGCTGCTCTTCTGATGGCTGGAACATAGGGATGGGGAGTATATGTGTAAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTGCTGGAATTTCTTCTTaGCTACAAAGTACTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVAGISS*LQSTAC Trigger: GCATGCAGTACTTTGTAGCCAAGAAGAAATTCCAGC...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR TCA 90 bp | CTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCATATCCTTATCCAGCTTaGACTTCTTCTTCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LQLVTCCCRLDHLVAWTAYPYPA*TSSSLP Trigger: TGGTAAAGAAGAAGAAGTTCAAGCTGGATAAGGATA...TGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR TCA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTTATCCTTATCCAGCTTaGACTTCTTCTTCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCLSCILLYTYTPHPYVYPYPA*TSSSLP Trigger: TGGTAAAGAAGAAGAAGTTCAAGCTGGATAAGGATA...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| 3UTR CAA 72 bp | ATTAAAACACAAGAGTCTGAATCACCAGAAATTATCTaGATTTCTGTGAGGCGTGGTGCCCAAGCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKTQESESPEII*ISVRRGAQAQG Trigger: TCCTTGGGCTTGGGCACCACGCCTCACAGAAATCAAGATAATTTCTGGTGATTCAGACTCTTGTGTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS CCA 90 bp | CCTGGATGTGGGTGCGCGCCAGCAGCGGGCGGCGCGCACTGTAGATaGAGACCCGCGGGTCAAGGCTCACCCGCGGACGTGGGCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGCGCAPAAGGAHCR*RPAGQGSPADVGRG Trigger: ACCTCGGCCCACGTCCGCGGGTGAGCCTTGACCCGCGGGTCTCCATCTACAGTGCGCGCCGCCCGCTGCTGGCGCGCACCCACATCCAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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| CDS GCA 90 bp | GCGCGAGCCCGGGGGCTCCGGTTGGCGCGATGGGCGCATAGACCGTaGTGCCCTCAGGGCCACCTTCGGCCAGCTCCAGTGAGAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARARGLRLARWAHRP*CPQGHLRPAPVRRD Trigger: GTCCCTTCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGGGCAGCACGGTCTATGCGCCCATCGCGCCAACCGGAGCCCCCGGGCTCGCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS TCA 90 bp | CCTCAGGGCCACCTTCGGCCAGCTCCAGTGAGAAGGGACACTTCTTaGCCACCGCGCTGCCCCGCCGGGCGCCTAGCAGGCGGCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PQGHLRPAPVRRDTS*PPRCPAGRLAGGSN Trigger: GTTGGAGCCGCCTGCTAGGCGCCCGGCGGGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS GCA 90 bp | CGAGCCCGGGGGCTCCGGTTGGCGCGATGGGCGCATAGACCGTGCTaGCCTCAGGGCCACCTTCGGCCAGCTCCAGTGAGAAGGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: RARGLRLARWAHRPC*PQGHLRPAPVRRDT Trigger: AGTGTCCCTTCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGGGCAGCACGGTCTATGCGCCCATCGCGCCAACCGGAGCCCCCGGGCTCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS GCA 90 bp | TGGGCTTCCGGGCAAAACGTAGCCGGCCCCAGATGCCCACGTACTTaGTGCGGCAGCCTGCAGACCAGAGGCGGACCACATATTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WASGQNVAGPRCPRT*CGSLQTRGGPHILS Trigger: GGACAGAATATGTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCGGAAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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| CDS GCA 90 bp | GCTTCCGGGCAAAACGTAGCCGGCCCCAGATGCCCACGTACTTGCTaGGGCAGCCTGCAGACCAGAGGCGGACCACATATTCTGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASGQNVAGPRCPRTC*GSLQTRGGPHILSQ Trigger: TTGGGACAGAATATGTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGAGAAGGGACACTTCTaGACCACCGCGCTGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVLVISRSRPVAWPMGFEKGHF*TTALPR Trigger: GCGGGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCTC...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CAA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATACAGATGCCCACGTACTaGCTGCGGCAGCCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HAQTSSSSHWLGRGVLVIQMPTY*LRQPAD Trigger: GTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTG...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CAA 90 bp | ACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGCAGATGCCCACGTACTaGCTGCGGCAGCCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TCDLLLQVGPPCCMDSSWQMPTY*LRQPAD Trigger: GTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTG...CCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCATGGCTGGGATCTGCCGGTaGAAGTGCTTCTGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQVGPPCCMDSSWWSMAGICR*KCFCLC Trigger: GCAGAGGCAGAAGCACTTCAACCGGCAGATCCCAGC...CATGCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCCTGGGGCACAGTCAGTaGTTCGTAGGTGGGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGVLVISRSRPVAWPMGFLGHSQ*FVGGQA Trigger: AGCCTGCCCACCTACGAACAACTGACTGTGCCCCAG...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS CCA 90 bp | CAGGGCAAGAATGCCAGTGGGGACAGGGTGTCCAGAGACTTGCCCTaGATACCCTGGGCAATCGTCTCCCTTTGCAAGGCAAACAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGKNASGDRVSRDLP*IPWAIVSLCKANSH Trigger: ATGGCTGTTTGCCTTGCAAAGGGAGACGATTGCCCAGGGTATCCAGGGCAAGTCTCTGGACACCCTGTCCCCACTGGCATTCTTGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186284.7 |
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| CDS TCA 90 bp | CGTGTGACTCCGAGCAGGCTTCCGGACATAGATCTTCCAAGTGGCTaGGTCAGGGTTCTCAGCGGCATAGCACCTCCATGCAGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVTPSRLPDIDLPSG*VRVLSGIAPPCSLD Trigger: ATCCAGACTGCATGGAGGTGCTATGCCGCTGAGAACCCTGACTCAGCCACTTGGAAGATCTATGTCCGGAAGCCTGCTCGGAGTCACACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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| CDS CCA 90 bp | CTTCTGCTGGACCTTCAGCGCGAACCCAGAGCCAAGTATCCCCGCTaGGAGTGCAAAGAAGGATATGGCGAAGACAGAGAAACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLDLQREPRAKYPR*ECKEGYGEDRETGG Trigger: GCCTCCTGTTTCTCTGTCTTCGCCATATCCTTCTTTGCACTCCCAGCGGGGATACTTGGCTCTGGGTTCGCGCTGAAGGTCCAGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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| CDS CCA 90 bp | GAAGCGTGTGACTCCGAGCAGGCTTCCGGACATAGATCTTCCAAGTaGCTGAGTCAGGGTTCTCAGCGGCATAGCACCTCCATGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EACDSEQASGHRSSK*LSQGSQRHSTSMQS Trigger: AGACTGCATGGAGGTGCTATGCCGCTGAGAACCCTGACTCAGCCACTTGGAAGATCTATGTCCGGAAGCCTGCTCGGAGTCACACGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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| CDS-3UTR CAA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTAGCGAACACTTGTCCTTaGGAACCCACGCAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVISRSRPVAWPMGFGALANTCP*EPTQRT Trigger: TGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCGC...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CAA 90 bp | TTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCGGGGCCTTAACCTGCTGTTGCAGGTaGGACCACCTTGTTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LVISRSRPVAWPMGFGALTCCCR*DHLVAW Trigger: CCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGT...TAAGGCCCCGAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS TCA 90 bp | AAGCCTCCTGGCATGTTCTTGGGGATCAGAATAGAAGTGGGGAGCTaGTGCATTGTCCCAGGGCCTAGAGAGGGAGCGGGAGGCAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KPPGMFLGIRIEVGS*CIVPGPREGAGGRK Trigger: TTTTCTGCCTCCCGCTCCCTCTCTAGGCCCTGGGACAATGCATCAGCTCCCCACTTCTATTCTGATCCCCAAGAACATGCCAGGAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186798.2 |
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| CDS CCA 90 bp | AATGCCAGTGGGGACAGGGTGTCCAGAGACTTGCCCTGGATACCCTaGGCAATCGTCTCCCTTTGCAAGGCAAACAGCCATCCGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: NASGDRVSRDLPWIP*AIVSLCKANSHPNS Trigger: TGAATTCGGATGGCTGTTTGCCTTGCAAAGGGAGACGATTGCCCAGGGTATCCAGGGCAAGTCTCTGGACACCCTGTCCCCACTGGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186284.7 |
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| CDS GCA 90 bp | ACAATCTCCATCCAGAAGAGGGTCCCGGTGGCCAGAGCGGCATACTaGTCAATAGTGGACAGGACACTGAAGATGAGGCAGACCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: TISIQKRVPVARAAY*SIVDRTLKMRQTRT Trigger: TGTTCTGGTCTGCCTCATCTTCAGTGTCCTGTCCACTATTGAGCAGTATGCCGCTCTGGCCACCGGGACCCTCTTCTGGATGGAGATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CCA 90 bp | ATGGACAGCAGCTGGTGGAGCATGTCTGTGATGATCACCAGTCTCTaGTCCAGTTGTGTCACCTTGTCTTCCACCCTGTTCAGACGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MDSSWWSMSVMITSL*SSCVTLSSTLFRRA Trigger: TGCCCGTCTGAACAGGGTGGAAGACAAGGTGACACAACTGGACCAGAGACTGGTGATCATCACAGACATGCTCCACCAGCTGCTGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
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| CDS-3UTR CAA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACGCGAACACTTGTCCTTaGGAACCCACGCAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LATTCDLLLQVGPPCCMDANTCP*EPTQRT Trigger: TGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCGC...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATGTTGCTGGGATCTGCCGGTaGAAGTGCTTCTGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCLSCILLYTYTPHPYVAGICR*KCFCLC Trigger: GCAGAGGCAGAAGCACTTCAACCGGCAGATCCCAGC...AACATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CAA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGGCAGGTTGGACCACCTaGTTGCATGGACAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWAGWTT*LHGQQL Trigger: CAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGC...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACAGCAGCTGGTGGAGCATGCCTCTGCAAAGCTGTTaGTTCTCAAGAAATGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQVGPPCCMDSSWWSMPLQSC*FSRNGV Trigger: CACCCCATTTCTTGAGAACAAACAGCTTTGCAGAGG...CATGCTCCACCAGCTGCTGTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCCAGACAAGTTCTAGTTCCCACTGGCTGGGCAGAGGGGTGTTGGTGATAATGGAGCCACCTTCATaGCTGGCTACAACTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HAQTSSSSHWLGRGVLVIMEPPS*LATTCD Trigger: GTCACAAGTTGTAGCCAGCAATGAAGGTGGCTCCAT...TATCACCAACACCCCTCTGCCCAGCCAGTGGGAACTAGAACTTGTCTGGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CAA 90 bp | GCTTCCCTCTGCCTGAGCTGCATCCTGCTTTACACATATACTCCCCATCCCTATACTTGTGACCTGCTGTaGCAGGTTGGACCACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASLCLSCILLYTYTPHPYTCDLL*QVGPPC Trigger: ACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGT...ATAGGGATGGGGAGTATATGTGTAAAGCAGGATGCAGCTCAGGCAGAGGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CCA 90 bp | CCTTCCAGGTCCAGGTCCTCTGCAAAGCTGTTTGTTCTCAAGAAATaGGGTGTGCTTACTTCCAGCAGTGTAGGGCTCTTCCTTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSRSSAKLFVLKK*GVLTSSSVGLFLTE Trigger: CTCAGTAAGGAAGAGCCCTACACTGCTGGAAGTAAGCACACCCCATTTCTTGAGAACAAACAGCTTTGCAGAGGACCTGGACCTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGTCCAGTTGTGTCACCTaGTCTTCCACCCTGTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWSSCVT*SSTLFR Trigger: TCTGAACAGGGTGGAAGACAAGGTGACACAACTGGA...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS TCA 90 bp | GAAATGGGGTGTGCTTACTTCCAGCAGTGTAGGGCTCTTCCTTACTaGGCTGTCATAGCCATCAATGGAGAAATGGTCTGGCCTCCTATC | + |
|
Preference number: 5 (lower is better) Translates to: EMGCAYFQQCRALPY*AVIAINGEMVWPPI Trigger: GATAGGAGGCCAGACCATTTCTCCATTGATGGCTATGACAGCTCAGTAAGGAAGAGCCCTACACTGCTGGAAGTAAGCACACCCCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGGAAACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTCTGCAAAGCTGTTaGTTCTCAAGAAATGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGGNPRLFLFPFRKPLGIPLQSC*FSRNGV Trigger: CACCCCATTTCTTGAGAACAAACAGCTTTGCAGAGG...TATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTTTCCACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGTGTTGGTGATATCCAGATCCAGGCCAGTGGCTTGGCCCATGGGTTTCTTATCCTTATCCAGCTaGAACTTCTTCTTCTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: RGVLVISRSRPVAWPMGFLSLSS*NFFFFT Trigger: GGTAAAGAAGAAGAAGTTCAAGCTGGATAAGGATAA...GAAACCCATGGGCCAAGCCACTGGCCTGGATCTGGATATCACCAACACCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CCA 90 bp | GCTGTCATAGCCATCAATGGAGAAATGGTCTGGCCTCCTATCCTCTaGGGGATCATAAGTGATGTGAGGAACATTGAACATCTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVIAINGEMVWPPIL*GIISDVRNIEHLLS Trigger: GGAGAGAAGATGTTCAATGTTCCTCACATCACTTATGATCCCCCAGAGGATAGGAGGCCAGACCATTTCTCCATTGATGGCTATGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCAGACTCTTCCTGTTTCCCTTTAGGAAGCCACTTGGCATACCTGGATGGTGCTGGAATTTCTTCTaGGCTACAAAGTACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: NPRLFLFPFRKPLGIPGWCWNFF*ATKYCM Trigger: CATGCAGTACTTTGTAGCCAAGAAGAAATTCCAGCA...CCATCCAGGTATGCCAAGTGGCTTCCTAAAGGGAAACAGGAAGAGTCTGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCTACAACTTGTGACCTGCTGTTGCAGGTTGGACCACCTTGTTGCATGGACTTATCCTTATCCAGCTaGAACTTCTTCTTCTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LATTCDLLLQVGPPCCMDLSLSS*NFFFFT Trigger: GGTAAAGAAGAAGAAGTTCAAGCTGGATAAGGATAA...GTCCATGCAACAAGGTGGTCCAACCTGCAACAGCAGGTCACAAGTTGTAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185383.2 |
||
| CDS CCA 72 bp | GGGTGCGCGCCAGCAGCGGGCGGCGCGCACTGTAGATaGAGACCCGCGGGTCAAGGCTCACCCGCGGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCAPAAGGAHCR*RPAGQGSPADV Trigger: CACGTCCGCGGGTGAGCCTTGACCCGCGGGTCTCCATCTACAGTGCGCGCCGCCCGCTGCTGGCGCGCACCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS GCA 72 bp | CGGGGGCTCCGGTTGGCGCGATGGGCGCATAGACCGTaGTGCCCTCAGGGCCACCTTCGGCCAGCTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGLRLARWAHRP*CPQGHLRPAPV Trigger: CACTGGAGCTGGCCGAAGGTGGCCCTGAGGGCAGCACGGTCTATGCGCCCATCGCGCCAACCGGAGCCCCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 90 bp | CCCTCAGGGCCACCTTCGGCCAGCTCCAGTGAGAAGGGACACTTCTaGACCACCGCGCTGCCCCGCCGGGCGCCTAGCAGGCGGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSGPPSASSSEKGHF*TTALPRRAPSRRLQ Trigger: TTGGAGCCGCCTGCTAGGCGCCCGGCGGGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS GCA 72 bp | GGGCTCCGGTTGGCGCGATGGGCGCATAGACCGTGCTaGCCTCAGGGCCACCTTCGGCCAGCTCCAGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLRLARWAHRPC*PQGHLRPAPVR Trigger: TCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGGGCAGCACGGTCTATGCGCCCATCGCGCCAACCGGAGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 72 bp | CCACCTTCGGCCAGCTCCAGTGAGAAGGGACACTTCTaGACCACCGCGCTGCCCCGCCGGGCGCCTAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPSASSSEKGHF*TTALPRRAPSR Trigger: CCTGCTAGGCGCCCGGCGGGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCTCACTGGAGCTGGCCGAAGGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 72 bp | CGGGCAAAACGTAGCCGGCCCCAGATGCCCACGTACTaGCTGCGGCAGCCTGCAGACCAGAGGCGGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: RAKRSRPQMPTY*LRQPADQRRTT Trigger: TGTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CAA 90 bp | ATGGGCTTCCGGGCAAAACGTAGCCGGCCCCAGATGCCCACGTACTaGCTGCGGCAGCCTGCAGACCAGAGGCGGACCACATATTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: MGFRAKRSRPQMPTY*LRQPADQRRTTYSV Trigger: GACAGAATATGTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCGGAAGCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS TCA 72 bp | TGGCCCGATGGTGATCCCGCAGCTGTGACACATGGGTaGTGGGGGTCAGCAGTGTCTCCCCTTCCAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPDGDPAAVTHG*WGSAVSPLPGP Trigger: TGGACCTGGAAGGGGAGACACTGCTGACCCCCATCACCCATGTGTCACAGCTGCGGGATCACCATCGGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS GCA 72 bp | CCGGCCCCAGATGCCCACGTACTTGCTGCGGCAGCCTaGAGACCAGAGGCGGACCACATATTCTGTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PAPDAHVLAAAA*RPEADHIFCPK Trigger: TTTGGGACAGAATATGTGGTCCGCCTCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS GCA 72 bp | AAATGGGCTTCCGGGCAAAACGTAGCCGGCCCCAGATaGCCACGTACTTGCTGCGGCAGCCTGCAGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KWASGQNVAGPR*PRTCCGSLQTR Trigger: TCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCGGAAGCCCATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS TCA 72 bp | TGCATGCGCCTGATGACCTTGATGGTGGCCCGATGGTaGTCCCGCAGCTGTGACACATGGGTGATGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CMRLMTLMVARW*SRSCDTWVMGV Trigger: GACCCCCATCACCCATGTGTCACAGCTGCGGGATCACCATCGGGCCACCATCAAGGTCATCAGGCGCATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS GCA 72 bp | CCCACCACAGAGCATCTGCGTAGCTGCCAAACTCGATaGGGCCGGACTCGTTCACCGCATCTTTCTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PTTEHLRSCQTR*GRTRSPHLSQP Trigger: TGGCTGAGAAAGATGCGGTGAACGAGTCCGGCCGCATCGAGTTTGGCAGCTACGCAGATGCTCTGTGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CAA 72 bp | GGCAAGAATGCCAGTGGGGACAGGGTGTCCAGAGACTaGCCCTGGATACCCTGGGCAATCGTCTCCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GKNASGDRVSRD*PWIPWAIVSLC Trigger: GCAAAGGGAGACGATTGCCCAGGGTATCCAGGGCAAGTCTCTGGACACCCTGTCCCCACTGGCATTCTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186284.7 |
||
| CDS TCA 72 bp | CCGAGCAGGCTTCCGGACATAGATCTTCCAAGTGGCTaGGTCAGGGTTCTCAGCGGCATAGCACCTCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: PSRLPDIDLPSG*VRVLSGIAPPC Trigger: GCATGGAGGTGCTATGCCGCTGAGAACCCTGACTCAGCCACTTGGAAGATCTATGTCCGGAAGCCTGCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS GCA 72 bp | GCAAGAATGCCAGTGGGGACAGGGTGTCCAGAGACTTaGCCTGGATACCCTGGGCAATCGTCTCCCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARMPVGTGCPET*PGYPGQSSPFA Trigger: TGCAAAGGGAGACGATTGCCCAGGGTATCCAGGGCAAGTCTCTGGACACCCTGTCCCCACTGGCATTCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186284.7 |
||
| CDS CCA 72 bp | GACTCCGAGCAGGCTTCCGGACATAGATCTTCCAAGTaGCTGAGTCAGGGTTCTCAGCGGCATAGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSEQASGHRSSK*LSQGSQRHSTS Trigger: GGAGGTGCTATGCCGCTGAGAACCCTGACTCAGCCACTTGGAAGATCTATGTCCGGAAGCCTGCTCGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CCA 72 bp | GGGGACAGGGTGTCCAGAGACTTGCCCTGGATACCCTaGGCAATCGTCTCCCTTTGCAAGGCAAACAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GDRVSRDLPWIP*AIVSLCKANSH Trigger: ATGGCTGTTTGCCTTGCAAAGGGAGACGATTGCCCAGGGTATCCAGGGCAAGTCTCTGGACACCCTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186284.7 |
||
| CDS CCA 72 bp | AATGCCAGTGGGGACAGGGTGTCCAGAGACTTGCCCTaGATACCCTGGGCAATCGTCTCCCTTTGCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NASGDRVSRDLP*IPWAIVSLCKA Trigger: TGCCTTGCAAAGGGAGACGATTGCCCAGGGTATCCAGGGCAAGTCTCTGGACACCCTGTCCCCACTGGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186284.7 |
||
| CDS TCA 72 bp | GGCATGTTCTTGGGGATCAGAATAGAAGTGGGGAGCTaGTGCATTGTCCCAGGGCCTAGAGAGGGAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GMFLGIRIEVGS*CIVPGPREGAG Trigger: TCCCGCTCCCTCTCTAGGCCCTGGGACAATGCATCAGCTCCCCACTTCTATTCTGATCCCCAAGAACATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186798.2 |
||
| CDS TCA 72 bp | CCGCAGGATCTGAAGGAAGCGGATACCCCTGATAGCTaGTGTGGCGAACACTTGTCCTTTGGAACCCACGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQDLKEADTPDS*CGEHLSFGTHA Trigger: TGCGTGGGTTCCAAAGGACAAGTGTTCGCCACATCAGCTATCAGGGGTATCCGCTTCCTTCAGATCCTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CCA 72 bp | ATGAGGCAGACCAGAACAATGAGGAAGACGGTGAAGTaGTACACGAAACACTTCCAACCCGTGGGGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: MRQTRTMRKTVK*YTKHFQPVGRS Trigger: CGAGCGCCCCACGGGTTGGAAGTGTTTCGTGTACCACTTCACCGTCTTCCTCATTGTTCTGGTCTGCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CCA 72 bp | GACCTTCAGCGCGAACCCAGAGCCAAGTATCCCCGCTaGGAGTGCAAAGAAGGATATGGCGAAGACAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DLQREPRAKYPR*ECKEGYGEDRE Trigger: TTCTCTGTCTTCGCCATATCCTTCTTTGCACTCCCAGCGGGGATACTTGGCTCTGGGTTCGCGCTGAAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CAA 72 bp | GTGATGATCACCAGTCTCTGGTCCAGTTGTGTCACCTaGTCTTCCACCCTGTTCAGACGGGCACCGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VMITSLWSSCVT*SSTLFRRAPMV Trigger: CACCATCGGTGCCCGTCTGAACAGGGTGGAAGACAAGGTGACACAACTGGACCAGAGACTGGTGATCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 72 bp | GAGCATGTCTGTGATGATCACCAGTCTCTGGTCCAGTaGTGTCACCTTGTCTTCCACCCTGTTCAGACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EHVCDDHQSLVQ*CHLVFHPVQTG Trigger: GCCCGTCTGAACAGGGTGGAAGACAAGGTGACACAACTGGACCAGAGACTGGTGATCATCACAGACATGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 90 bp | AGGAAGCGGATACCCCTGATAGCTGATGTGGCGAACACTTGTCCTTaGGAACCCACGCAGAGGACAACCATAGAGGCTACAACCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: RKRIPLIADVANTCP*EPTQRTTIEATTTM Trigger: CATCGTGGTTGTAGCCTCTATGGTTGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCGCCACATCAGCTATCAGGGGTATCCGCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CAA 90 bp | AGCATGTCTGTGATGATCACCAGTCTCTGGTCCAGTTGTGTCACCTaGTCTTCCACCCTGTTCAGACGGGCACCGATGGTGTTACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SMSVMITSLWSSCVT*SSTLFRRAPMVLLP Trigger: TGGCAGTAACACCATCGGTGCCCGTCTGAACAGGGTGGAAGACAAGGTGACACAACTGGACCAGAGACTGGTGATCATCACAGACATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS TCA 72 bp | GGCATGTTCTTGGGGATCAGAATAGAAGTGGGGAGCTaGTGCATTGTCCCAGGGCTCTCACACCACTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GMFLGIRIEVGS*CIVPGLSHHSQ Trigger: TTGTGAGTGGTGTGAGAGCCCTGGGACAATGCATCAGCTCCCCACTTCTATTCTGATCCCCAAGAACATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186488.7 |
||
| CDS GCA 72 bp | CGTGCTTGCTGGAATTTCTTCTTGGCTACAAAGTACTaGATGCGCCTGATGACCTTGATGGTGGCCCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RACWNFFLATKY*MRLMTLMVARW Trigger: CCATCGGGCCACCATCAAGGTCATCAGGCGCATGCAGTACTTTGTAGCCAAGAAGAAATTCCAGCAAGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CCA 72 bp | CTCTGTAGTTCTTTAATGCGCACCATAAGGTTCAGGTaGCCCTGGGAGTACTGCTCGATGACATCTCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LCSSLMRTIRFR*PWEYCSMTSRT Trigger: CGTGCGAGATGTCATCGAGCAGTACTCCCAGGGCCACCTGAACCTTATGGTGCGCATTAAAGAACTACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CCA 72 bp | TCACCTTGTCTTCCACCCTGTTCAGACGGGCACCGATaGTGTTACTGCCACGGTCTTTGCTCTTTTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPCLPPCSDGHR*CYCHGLCSFLR Trigger: TCTCAGAAAAGAGCAAAGACCGTGGCAGTAACACCATCGGTGCCCGTCTGAACAGGGTGGAAGACAAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CCA 72 bp | AGCTGGTGGAGCATGTCTGTGATGATCACCAGTCTCTaGTCCAGTTGTGTCACCTTGTCTTCCACCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWWSMSVMITSL*SSCVTLSSTLF Trigger: GAACAGGGTGGAAGACAAGGTGACACAACTGGACCAGAGACTGGTGATCATCACAGACATGCTCCACCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 90 bp | TCCACCCTGTTCAGACGGGCACCGATGGTGTTACTGCCACGGTCTTaGCTCTTTTCTGAGATGGGGATGAACAAAGATGGCTTCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: STLFRRAPMVLLPRS*LFSEMGMNKDGFPM Trigger: CATTGGGAAGCCATCTTTGTTCATCCCCATCTCAGAAAAGAGCAAAGACCGTGGCAGTAACACCATCGGTGCCCGTCTGAACAGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS CAA 72 bp | ATACCCCTGATAGCTGATGTGGCGAACACTTGTCCTTaGGAACCCACGCAGAGGACAACCATAGAGGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: IPLIADVANTCP*EPTQRTTIEAT Trigger: TGTAGCCTCTATGGTTGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCGCCACATCAGCTATCAGGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CAA 72 bp | CTCGATGACATCTCGCACGTCGTAGGGCTTCCGTGCTaGCTGGAATTTCTTCTTGGCTACAAAGTACTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LDDISHVVGLPC*LEFLLGYKVLH Trigger: ATGCAGTACTTTGTAGCCAAGAAGAAATTCCAGCAAGCACGGAAGCCCTACGACGTGCGAGATGTCATCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009689.11 |
||
| CDS TCA 72 bp | TGTGCTTACTTCCAGCAGTGTAGGGCTCTTCCTTACTaGGCTGTCATAGCCATCAATGGAGAAATGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CAYFQQCRALPY*AVIAINGEMVW Trigger: CCAGACCATTTCTCCATTGATGGCTATGACAGCTCAGTAAGGAAGAGCCCTACACTGCTGGAAGTAAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CCA 72 bp | GCCATCAATGGAGAAATGGTCTGGCCTCCTATCCTCTaGGGGATCATAAGTGATGTGAGGAACATTGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: AINGEMVWPPIL*GIISDVRNIEH Trigger: ATGTTCAATGTTCCTCACATCACTTATGATCCCCCAGAGGATAGGAGGCCAGACCATTTCTCCATTGATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
||
| CDS CAA 90 bp | TTGAACATCTTCTCTCCAGGACTCATCCCATTATCCTTATCCAGCTaGAACTTCTTCTTCTTTACCATGACAGACTTTTTAGGTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LNIFSPGLIPLSLSS*NFFFFTMTDFLGLG Trigger: CCCCAAACCTAAAAAGTCTGTCATGGTAAAGAAGAAGAAGTTCAAGCTGGATAAGGATAATGGGATGAGTCCTGGAGAGAAGATGTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009689.11 ENSMUST00000185383.2 |
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