Pregenerated sensors for KCNMB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091091Ensembl transcript IDs: ENSMUST00000164954.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAAGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTaGGACTGGAGAGCTGGGGCCCCCTCTTCAGCTCTCTCTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LKSSPPCRAVAKSSS*DWRAGAPSSALSLP Trigger: AGGAAGAGAGAGAGCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR GCA 90 bp | TGCCAGCAAGTCCACCAGAGAGCTGTAGTTACATTAAGGACTGACTaGCTTGAGTTCCTTTTGCCTGTGAGGAGAAGACTGCTTCCATCG | + |
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Preference number: 1 (lower is better) Translates to: CQQVHQRAVVTLRTD*LEFLLPVRRRLLPS Trigger: CGATGGAAGCAGTCTTCTCCTCACAGGCAAAAGGAACTCAAGGCAGTCAGTCCTTAATGTAACTACAGCTCTCTGGTGGACTTGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR TCA 90 bp | CTGCTTCCATCGCTTGTGGAAGGAGACTGGGGAAAGAAAAACTGTTaGAATGGTACACGTTCTTTAGACTTAATAGAAAGTAGACAACAT | + |
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Preference number: 1 (lower is better) Translates to: LLPSLVEGDWGKKNC*NGTRSLDLIESRQH Trigger: ATGTTGTCTACTTTCTATTAAGTCTAAAGAACGTGTACCATTTCAACAGTTTTTCTTTCCCCAGTCTCCTTCCACAAGCGATGGAAGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CAA 90 bp | TCTCAAGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTaGGGACTGGAGAGCTGGGGCCCCCTCTTCAGCTCTCTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SQVFSTMSGSGQVFI*GLESWGPLFSSLSS Trigger: GGAAGAGAGAGAGCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCCTTTTGCCTGTGAGGAGAAGACTGCTTCCATCGCTTGTGGAAGGAGACAGGGCCTTGTGCAGGTaGGGCAGGTACTCTACAATA | + |
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Preference number: 2 (lower is better) Translates to: EFLLPVRRRLLPSLVEGDRALCR*GRYSTI Trigger: TATTGTAGAGTACCTGCCTCACCTGCACAAGGCCCT...GTCTCCTTCCACAAGCGATGGAAGCAGTCTTCTCCTCACAGGCAAAAGGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTTATGGAAAGCTGTACCTTTGCCCCTCACACAGCAGGTCTGTAAGCAGATATTGGGACTGGAGAGCTaGGGCCCCCTCTTCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLWKAVPLPLTQQVCKQILGLES*GPLFSS Trigger: AGAGCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAA...TATCTGCTTACAGACCTGCTGTGTGAGGGGCAAAGGTACAGCTTTCCATAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGACGTTCTTTTATGGAAAGCTGTACCTTTGCCCCTCACACAGCAGGTCTGTCTGCCTCCCAAGGGCTaGCTGGGGTCTCAAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KDVLLWKAVPLPLTQQVCLPPKG*LGSQVF Trigger: GAAGACTTGAGACCCCAGCCAGCCCTTGGGAGGCAG...ACAGACCTGCTGTGTGAGGGGCAAAGGTACAGCTTTCCATAAAAGAACGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGTTCCTTTTGCCTGTGAGGAGAAGACTGCTTCCATCGCTTGTGGAAGGAAAAGACGTTCTTTTATaGAAAGCTGTACCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LEFLLPVRRRLLPSLVEGKDVLL*KAVPLP Trigger: GGGCAAAGGTACAGCTTTCCATAAAAGAACGTCTTT...TCCTTCCACAAGCGATGGAAGCAGTCTTCTCCTCACAGGCAAAAGGAACTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CCA 72 bp | TCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTaGGACTGGAGAGCTGGGGCCCCCTCTTCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SPPCRAVAKSSS*DWRAGAPSSAL Trigger: GAGAGCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CCA 72 bp | CCATGTCGGGCAGTGGCCAAGTCTTCATCTTGGGACTaGAGAGCTGGGGCCCCCTCTTCAGCTCTCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: PCRAVAKSSSWD*RAGAPSSALSL Trigger: AAGAGAGAGAGCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CCA 72 bp | GCTGGGGTCTCAAGTCTTCTCCACCATGTCGGGCAGTaGCCAAGTCTTCATCTTGGGACTGGAGAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: AGVSSLLHHVGQ*PSLHLGTGELG Trigger: CCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGAGACCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGTTCCTTTTGCCTGTGAGGAGAAGACTGCTTCCATCGCTTGTGGAAGGATGGAAAGCTGTACCTTaGCCCCTCACACAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LEFLLPVRRRLLPSLVEGWKAVP*PLTQQV Trigger: GACCTGCTGTGTGAGGGGCAAAGGTACAGCTTTCCA...TCCTTCCACAAGCGATGGAAGCAGTCTTCTCCTCACAGGCAAAAGGAACTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR GCA 72 bp | GCGTTGGACAGACAGACCCAGCAGTGGCATGTTACATaGCAGCAAGTCCACCAGAGAGCTGTAGTTACATTA | + |
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Preference number: 3 (lower is better) Translates to: ALDRQTQQWHVT*QQVHQRAVVTL Trigger: TAATGTAACTACAGCTCTCTGGTGGACTTGCTGGCATGTAACATGCCACTGCTGGGTCTGTCTGTCCAACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR GCA 72 bp | GTCCACCAGAGAGCTGTAGTTACATTAAGGACTGACTaGCTTGAGTTCCTTTTGCCTGTGAGGAGAAGACTG | + |
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Preference number: 3 (lower is better) Translates to: VHQRAVVTLRTD*LEFLLPVRRRL Trigger: CAGTCTTCTCCTCACAGGCAAAAGGAACTCAAGGCAGTCAGTCCTTAATGTAACTACAGCTCTCTGGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR TCA 72 bp | TCGCTTGTGGAAGGAGACTGGGGAAAGAAAAACTGTTaGAATGGTACACGTTCTTTAGACTTAATAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: SLVEGDWGKKNC*NGTRSLDLIES Trigger: ACTTTCTATTAAGTCTAAAGAACGTGTACCATTTCAACAGTTTTTCTTTCCCCAGTCTCCTTCCACAAGCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CAA 72 bp | TTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTaGGGACTGGAGAGCTGGGGCCCCCTCTTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSTMSGSGQVFI*GLESWGPLFSS Trigger: AGAGCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | TCTTCCTTCCCTGACTCTGCCACACTGTACAGTGTAGACCTGCACCGGCCCACAGATCTCCCGTGGTCCTaGCAGCTACCCTCACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSFPDSATLYSVDLHRPTDLPWS*QLPSQV Trigger: CACCTGTGAGGGTAGCTGCCAGGACCACGGGAGATC...TGTGGGCCGGTGCAGGTCTACACTGTACAGTGTGGCAGAGTCAGGGAAGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR TCA 90 bp | GGTCTCAAGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTGGGACGTCCTCACCAGCGCTTaGTGGAAGCTTTGGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GLKSSPPCRAVAKSSSWDVLTSA*WKLWVH Trigger: GTGCACCCAAAGCTTCCATCAAGCGCTGGTGAGGAC...GTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR TCA 90 bp | GGCAGTGGCCAAGTCTTCATCTTGGGACTGGAGAGCTGGGGCCCCCTCTTCAGCGGCCAAAATAAGCAGTaGAAGACAACCTTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSGQVFILGLESWGPLFSGQNKQ*KTTLWP Trigger: TGGCCACAAGGTTGTCTTTCACTGCTTATTTTGGCC...GCTGAAGAGGGGGCCCCAGCTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | GTCTCAAGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTGGGACTCCCTGTAGCGTGATTTaGACAGGGATGCTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VSSLLHHVGQWPSLHLGTPCSVI*TGMLKG Trigger: GCCCTTCAGCATCCCTGTCCAAATCACGCTACAGGG...AGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CAA 72 bp | TTGCCCCTCACACAGCAGGTCTGTAAGCAGATAGGATaGTTTCTAGTACTGGGGCTCAAGCCCAGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LPLTQQVCKQIG*FLVLGLKPRAL Trigger: CAAGGCCCTGGGCTTGAGCCCCAGTACTAGAAACAATCCTATCTGCTTACAGACCTGCTGTGTGAGGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | AGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTGGGACTGGAGAGAGGGCTTCAACACAGTaGTCCCCAACAGGAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: SLLHHVGQWPSLHLGTGERASTQ*SPTGRT Trigger: TGTTCTTCCTGTTGGGGACCACTGTGTTGAAGCCCT...CTCTCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | AACTCAGGTGCCCATGCTTACACAGCAAACATTTTACCAACTGAGCCATCTCCCCATGGGGATCTCCCGTaGTCCTGGCAGCTACCCTCA | + |
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Preference number: 4 (lower is better) Translates to: NSGAHAYTANILPTEPSPHGDLP*SWQLPS Trigger: TGAGGGTAGCTGCCAGGACCACGGGAGATCCCCATG...GGGAGATGGCTCAGTTGGTAAAATGTTTGCTGTGTAAGCATGGGCACCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR TCA 90 bp | GGTCTCAAGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTGGGACGACAGTGGTGCAGTTTaGTTCTTCTCTGGGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: GLKSSPPCRAVAKSSSWDDSGAV*FFSGRS Trigger: AGATCTCCCAGAGAAGAATCAAACTGCACCACTGTC...GTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | AGAGCTGTAGTTACATTAAGGACTGACTGCCTTGAGTTCCTTTTGCCTGTGAGGCAGAGGAAGCCATCATaGCCACGCCCAGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: RAVVTLRTDCLEFLLPVRQRKPS*PRPAAW Trigger: CCATGCTGCTGGGCGTGGCCATGATGGCTTCCTCTG...CCTCACAGGCAAAAGGAACTCAAGGCAGTCAGTCCTTAATGTAACTACAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | TCAAGTCTTCTCCACCATGTCGGGCAGTGGCCAAGTCTTCATCTTGGGACTGGATGTGTGTGTGGACAGTaGTGCAGTTTGATTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSLLHHVGQWPSLHLGTGCVCGQ*CSLILL Trigger: GAGAAGAATCAAACTGCACCACTGTCCACACACACA...TCCAGTCCCAAGATGAAGACTTGGCCACTGCCCGACATGGTGGAGAAGACTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR TCA 90 bp | AAGACTGCTTCCATCGCTTGTGGAAGGAGACTGGGGAAAGAAAAACTGTTGAAAAGCTACCCTCACAGGTaGAGGAAAAGTCCAGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: KTASIACGRRLGKEKLLKSYPHR*RKSPAR Trigger: ACGGGCTGGACTTTTCCTTCACCTGTGAGGGTAGCT...TTTCAACAGTTTTTCTTTCCCCAGTCTCCTTCCACAAGCGATGGAAGCAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTAGTTACATTAAGGACTGACTGCCTTGAGTTCCTTTTGCCTGTGAGGGATGGAAGCTTTGGGTaGACCTTCAGGGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RAVVTLRTDCLEFLLPVRDGSFG*TFRGSP Trigger: TGGAGATCCCCTGAAGGTGCACCCAAAGCTTCCATC...CCTCACAGGCAAAAGGAACTCAAGGCAGTCAGTCCTTAATGTAACTACAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTAGTTACATTAAGGACTGACTGCCTTGAGTTCCTTTTGCCTGTGAGGGTGTGTGGACAGTGGTaGAGTTTGATTCTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RAVVTLRTDCLEFLLPVRVCGQW*SLILLW Trigger: CCAGAGAAGAATCAAACTGCACCACTGTCCACACAC...CCTCACAGGCAAAAGGAACTCAAGGCAGTCAGTCCTTAATGTAACTACAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CAA 72 bp | GTAGTTACATTAAGGACTGACTGCCTTGAGTTCCTTTaGCCTGTGAGGAGAAGACTGCTTCCATCGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VVTLRTDCLEFL*PVRRRLLPSLV Trigger: CACAAGCGATGGAAGCAGTCTTCTCCTCACAGGCAAAAGGAACTCAAGGCAGTCAGTCCTTAATGTAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS-3UTR CCA 90 bp | AAAGACGTTCTTTTATGGAAAGCTGTACCTTTGCCCCTCACACAGCAGGTCTGTTCCACAATGTGTGTGTaGACAGTGGTGCAGTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: KDVLLWKAVPLPLTQQVCSTMCV*TVVQFD Trigger: ATCAAACTGCACCACTGTCCACACACACATTGTGGA...ACAGACCTGCTGTGTGAGGGGCAAAGGTACAGCTTTCCATAAAAGAACGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| 3UTR CAA 72 bp | ACATTTAAAGACGTTCTTTTATGGAAAGCTGTACCTTaGCCCCTCACACAGCAGGTCTGTAAGCAGATAGGA | + |
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Preference number: 4 (lower is better) Translates to: TFKDVLLWKAVP*PLTQQVCKQIG Trigger: TCCTATCTGCTTACAGACCTGCTGTGTGAGGGGCAAAGGTACAGCTTTCCATAAAAGAACGTCTTTAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 90 bp | GGATCTCCATTGATTTTGCCCGAGGCCGGAAGTGCTGTCCTCCCTTaGCGCCTCCGGCCACCCTGTAGCGTGATTTGGACAGGGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: GSPLILPEAGSAVLP*RLRPPCSVIWTGML Trigger: CAGCATCCCTGTCCAAATCACGCTACAGGGTGGCCGGAGGCGCCAAGGGAGGACAGCACTTCCGGCCTCGGGCAAAATCAATGGAGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 90 bp | CAGTGGTCCCCAACAGGAAGAACATCAGTACAGAGGAAGCCATCATaGCCACGCCCAGCAGCATGGCCCGGTCCTCACCAGCGCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: QWSPTGRTSVQRKPS*PRPAAWPGPHQRLM Trigger: CATCAAGCGCTGGTGAGGACCGGGCCATGCTGCTGGGCGTGGCCATGATGGCTTCCTCTGTACTGATGTTCTTCCTGTTGGGGACCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 90 bp | CACTTTCTGTCCCGAGTGGCTCAGGTTTACGAACACCTGCAGGCATaGGGATCTCCCGTGGTCCTGGCAGCTACCCTCACAGGTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: HFLSRVAQVYEHLQA*GSPVVLAATLTGEG Trigger: TCCTTCACCTGTGAGGGTAGCTGCCAGGACCACGGGAGATCCCCATGCCTGCAGGTGTTCGTAAACCTGAGCCACTCGGGACAGAAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS TCA 90 bp | GTCCAGCCCGTCATCCACAATGTGTGTGTGGACAGTGGTGCAGTTTaGTTCTTCTCTGGGAGATCTGAGCATGAAGGGCTTCAACACAGT | + |
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Preference number: 5 (lower is better) Translates to: VQPVIHNVCVDSGAV*FFSGRSEHEGLQHS Trigger: ACTGTGTTGAAGCCCTTCATGCTCAGATCTCCCAGAGAAGAATCAAACTGCACCACTGTCCACACACACATTGTGGATGACGGGCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 72 bp | TTGATTTTGCCCGAGGCCGGAAGTGCTGTCCTCCCTTaGCGCCTCCGGCCACCCTGTAGCGTGATTTGGACA | + |
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Preference number: 6 (lower is better) Translates to: LILPEAGSAVLP*RLRPPCSVIWT Trigger: TGTCCAAATCACGCTACAGGGTGGCCGGAGGCGCCAAGGGAGGACAGCACTTCCGGCCTCGGGCAAAATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 72 bp | TCCCGAGTGGCTCAGGTTTACGAACACCTGCAGGCATaGGGATCTCCCGTGGTCCTGGCAGCTACCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: SRVAQVYEHLQA*GSPVVLAATLT Trigger: TGTGAGGGTAGCTGCCAGGACCACGGGAGATCCCCATGCCTGCAGGTGTTCGTAAACCTGAGCCACTCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CAA 90 bp | CTTGATGGAAGCTTTGGGTGCACCTTCAGGGGATCTCCATTGATTTaGCCCGAGGCCGGAAGTGCTGTCCTCCCTTGGCGCCTCCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LDGSFGCTFRGSPLI*PEAGSAVLPWRLRP Trigger: TGGCCGGAGGCGCCAAGGGAGGACAGCACTTCCGGCCTCGGGCAAAATCAATGGAGATCCCCTGAAGGTGCACCCAAAGCTTCCATCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 72 bp | CCAACAGGAAGAACATCAGTACAGAGGAAGCCATCATaGCCACGCCCAGCAGCATGGCCCGGTCCTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: PTGRTSVQRKPS*PRPAAWPGPHQ Trigger: CTGGTGAGGACCGGGCCATGCTGCTGGGCGTGGCCATGATGGCTTCCTCTGTACTGATGTTCTTCCTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 72 bp | ACGAACACCTGCAGGCATGGGGATCTCCCGTGGTCCTaGCAGCTACCCTCACAGGTGAAGGAAAAGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TNTCRHGDLPWS*QLPSQVKEKSS Trigger: GCTGGACTTTTCCTTCACCTGTGAGGGTAGCTGCCAGGACCACGGGAGATCCCCATGCCTGCAGGTGTTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS GCA 72 bp | GCCCGGTCCTCACCAGCGCTTGATGGAAGCTTTGGGTaGACCTTCAGGGGATCTCCATTGATTTTGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: ARSSPALDGSFG*TFRGSPLILPE Trigger: CTCGGGCAAAATCAATGGAGATCCCCTGAAGGTGCACCCAAAGCTTCCATCAAGCGCTGGTGAGGACCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS CCA 72 bp | AGGTTTACGAACACCTGCAGGCATGGGGATCTCCCGTaGTCCTGGCAGCTACCCTCACAGGTGAAGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: RFTNTCRHGDLP*SWQLPSQVKEK Trigger: CTTTTCCTTCACCTGTGAGGGTAGCTGCCAGGACCACGGGAGATCCCCATGCCTGCAGGTGTTCGTAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS TCA 72 bp | GACACTTGGGTGTGTAAAAGCACTTGGGGTTGGTCCTaGTGGCCTCGTCGTCGTAGTGGAGAAGCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: DTWVCKSTWGWS*WPRRRSGEALS Trigger: AGAAAGTGCTTCTCCACTACGACGACGAGGCCATCAGGACCAACCCCAAGTGCTTTTACACACCCAAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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| CDS TCA 72 bp | GTCATCCACAATGTGTGTGTGGACAGTGGTGCAGTTTaGTTCTTCTCTGGGAGATCTGAGCATGAAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VIHNVCVDSGAV*FFSGRSEHEGL Trigger: AAGCCCTTCATGCTCAGATCTCCCAGAGAAGAATCAAACTGCACCACTGTCCACACACACATTGTGGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164954.3 |
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