Pregenerated sensors for KCNMB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037610Ensembl transcript IDs: ENSMUST00000119310.8, ENSMUST00000119970.8, ENSMUST00000178668.2, ENSMUST00000191869.6, ENSMUST00000192429.6, ENSMUST00000194796.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCTGTAGAGTTTGGTCAGGATGACACTCTTCTGGTTTCCTTCTaGGTCAGAATAGCAGGGGAAGTGTTGGTGTCTCCTGAAGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: GAVEFGQDDTLLVSF*VRIAGEVLVSPEVF Trigger: GAAAACTTCAGGAGACACCAACACTTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCTACAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR TCA 90 bp | AGAGAGAATGGAACAGCACATTGGAGCTGTAGAGTTTGGTCAGGATaGCACTCTTCTGGTTTCCTTCTGGGTCAGAATAGCAGGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: RENGTAHWSCRVWSG*HSSGFLLGQNSRGS Trigger: ACTTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCTACAGCTCCAATGTGCTGTTCCATTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR CCA 90 bp | TTTCACCATAGCAACGATTGCCACACCCCCAGCCATCATACAAGTTaGCCAGAAGAGAGAATGGAACAGCACATTGGAGCTGTAGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: FHHSNDCHTPSHHTS*PEERMEQHIGAVEF Trigger: AAACTCTACAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTGGGGGTGTGGCAATCGTTGCTATGGTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR CCA 90 bp | ATTTCCCATAAATATCTTTGTAACATAGACTTTCCAAAATTGCAATaGCATGCCTACCAACACCCAGTCAGTTTACTGGGAGTGATCTCA | + |
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Preference number: 1 (lower is better) Translates to: ISHKYLCNIDFPKLQ*HAYQHPVSLLGVIS Trigger: TGAGATCACTCCCAGTAAACTGACTGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATATTTATGGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| 3UTR TCA 90 bp | AAGTATGTCATAATGTCATCATGTATGCTTCATCCTTGCATCAGTTaGTGGGAATCCCAGGGAACATTTAAGATTGCAAATTTCAACCCT | + |
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Preference number: 1 (lower is better) Translates to: KYVIMSSCMLHPCIS*WESQGTFKIANFNP Trigger: AGGGTTGAAATTTGCAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATACATGATGACATTATGACATACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCGAAACAACCAACCAATaGGGAACAGTTAATTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GNSEQRPGLGDSASMPLCETTNQ*GTVNSP Trigger: AGGAGAATTAACTGTTCCTCATTGGTTGGTTGTTTC...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCATCATACAAGTTGGCCAGAAGAGAGAATGGAACAGCACATTGGAGCTGAGAGTTTGGTCAGGATaGCACTCTTCTGGTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PAIIQVGQKREWNSTLELRVWSG*HSSGFL Trigger: AAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCT...CAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGAGAATGGAACAGCACATTGGAGCTGTAGAGTTTGGTCAGGATGACACTCTTCTGGTTTCCTTCTaGGTCAGAATAGCAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: EERMEQHIGAVEFGQDDTLLVSF*VRIAGE Trigger: TTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAG...AGTGTCATCCTGACCAAACTCTACAGCTCCAATGTGCTGTTCCATTCTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGCCCCACCAAATAGAATaGGTAAACATCAATGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VCFILASVDGNPREHLRLPHQIE*VNINVK Trigger: CTTCACATTGATGTTTACTCATTCTATTTGGTGGGG...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGACACATTTGAAGTCCTaGTTACACCCTAGGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: VCFILASVDGNPREHLRLTHLKS*LHPRDL Trigger: TAAATCCCTAGGGTGTAATCAGGACTTCAAATGTGT...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| 3UTR-3UTR GCA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGCCCCCTTCCTTACAGTaGTGTGGTAAAAATAATAAT | + |
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Preference number: 2 (lower is better) Translates to: VCFILASVDGNPREHLRLPPSLQ*CGKNNN Trigger: ATTATTATTTTTACCACAGCACTGTAAGGAAGGGGG...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTTGTCTTCAGGAAGTCTaGAAACTCAGAACAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: RMSKHQCEERLPSNLLFICLQEV*KLRTET Trigger: GGTCTCTGTTCTGAGTTTCCAGACTTCCTGAAGACA...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| 3UTR CCA 72 bp | AGCAACGATTGCCACACCCCCAGCCATCATACAAGTTaGCCAGAAGAGAGAATGGAACAGCACATTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SNDCHTPSHHTS*PEERMEQHIGA Trigger: AGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTGGGGGTGTGGCAATCGTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR TCA 72 bp | ATCCGTTGGATCCTCTCACAAAGCAGGGAGAGGTACTaGGTTAGTTTCACCATAGCAACGATTGCCACACCC | + |
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Preference number: 3 (lower is better) Translates to: IRWILSQSRERY*VSFTIATIATP Trigger: GGGTGTGGCAATCGTTGCTATGGTGAAACTAACTCAGTACCTCTCCCTGCTTTGTGAGAGGATCCAACGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR CCA 72 bp | GAGTTTGGTCAGGATGACACTCTTCTGGTTTCCTTCTaGGTCAGAATAGCAGGGGAAGTGTTGGTGTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: EFGQDDTLLVSF*VRIAGEVLVSP Trigger: AGGAGACACCAACACTTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCTGACCAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCATAAGGACATCATGTTaGCATATAGGACAGCGTTTG | + |
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Preference number: 3 (lower is better) Translates to: GNSEQRPGLGDSASMPLCIRTSC*HIGQRL Trigger: CAAACGCTGTCCTATATGCAAACATGATGTCCTTAT...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| 3UTR-3UTR CAA 90 bp | CCAGCCATCATACAAGTTGGCCAGAAGAGAGAATGGAACAGCACATTGGAGCTGATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PAIIQVGQKREWNSTLELIAGEV*VSPEVF Trigger: GAAAACTTCAGGAGACACCAACACTTCCCCTGCTAT...CAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| 3UTR TCA 72 bp | GGAACAGCACATTGGAGCTGTAGAGTTTGGTCAGGATaGCACTCTTCTGGTTTCCTTCTGGGTCAGAATAGC | + |
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Preference number: 3 (lower is better) Translates to: GTAHWSCRVWSG*HSSGFLLGQNS Trigger: GCTATTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCTACAGCTCCAATGTGCTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| CDS-3UTR CCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCCCAGGCCGAGCAGGATaGCCCGGTCCTCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCPGRAG*PGPPQP Trigger: AGGCTGGGGAGGACCGGGCCATCCTGCTCGGCCTGG...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | GCCACACCCCCAGCCATCATACAAGTTGGCCAGAAGAGAGAATGGAACAGCACAGTCCTGTCTGTAAGATaGAGAGGTCCGGCCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ATPPAIIQVGQKREWNSTVLSVR*RGPATG Trigger: ACCAGTGGCCGGACCTCTTCATCTTACAGACAGGAC...TGTGCTGTTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTGGGGGTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194796.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCCACCATAGCAACGATTaGCACACCCCCAGCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCHHSND*HTPSHH Trigger: ATGATGGCTGGGGGTGTGGCAATCGTTGCTATGGTG...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCGCAGGAAGTACATCATaGTGGAGCACACCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCAGSTS*WSTPSW Trigger: CCATGATGGTGTGCTCCATCATGATGTACTTCCTGC...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCGGCCAGAAGAGAGAATaGAACAGCACATTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCGQKRE*NSTLEL Trigger: CAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCC...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCGTCCTGTCTGTAAGATaGAGAGGTCCGGCCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTVLSVR*RGPATG Trigger: ACCAGTGGCCGGACCTCTTCATCTTACAGACAGGAC...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCTGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCG | + |
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Preference number: 4 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTCRQGY*ESFQQS Trigger: CGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCA...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCACCAGGCCGAGCAGGATaGCCCGGTCCTCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPPGRAG*PGPPQP Trigger: AGGCTGGGGAGGACCGGGCCATCCTGCTCGGCCTGG...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCCTTCTGGTTTCCTTCTaGGTCAGAATAGCAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCLLVSF*VRIAGE Trigger: TTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAG...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTATGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCG | + |
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Preference number: 4 (lower is better) Translates to: LALTDSPTATNSPVLSILCRQGY*ESFQQS Trigger: CGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCA...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACCCAGGCCGAGCAGGATaGCCCGGTCCTCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNPGRAG*PGPPQP Trigger: AGGCTGGGGAGGACCGGGCCATCCTGCTCGGCCTGG...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTATTCAGCAGGGCACACTaGGCTTCTTCTGTCCACACG | + |
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Preference number: 4 (lower is better) Translates to: LALTDSPTATNSPVLSILFSRAH*ASSVHT Trigger: CGTGTGGACAGAAGAAGCCCAGTGTGCCCTGCTGAA...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCAGGATGACACTCTTCTaGTTTCCTTCTGGGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCRMTLF*FPSGSE Trigger: TTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCT...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCGCAGGAAGTACATCATaGTGGAGCACACCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTAGSTS*WSTPSW Trigger: CCATGATGGTGTGCTCCATCATGATGTACTTCCTGC...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTCCAGGCCGAGCAGGATaGCCCGGTCCTCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFIPGRAG*PGPPQP Trigger: AGGCTGGGGAGGACCGGGCCATCCTGCTCGGCCTGG...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCGGCCAGAAGAGAGAATaGAACAGCACATTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTGQKRE*NSTLEL Trigger: CAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCC...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | GGAAACTCAGAACAGAGACCTGGTCTTGGGGATAGTGCCTCCATGCCCCTATGCAGCCATCATACAAGTTaGCCAGAAGAGAGAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: GNSEQRPGLGDSASMPLCSHHTS*PEERME Trigger: TTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCT...GCATAGGGGCATGGAGGCACTATCCCCAAGACCAGGTCTCTGTTCTGAGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATAGTCCTGTCTGTAAGATaGAGAGGTCCGGCCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ALTDSPTATNSPVLSILIVLSVR*RGPATG Trigger: ACCAGTGGCCGGACCTCTTCATCTTACAGACAGGAC...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGCAGGGAGAGGTACTaGGTTAGTTTCACCATAGCA | + |
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Preference number: 4 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTSRERY*VSFTIA Trigger: TGCTATGGTGAAACTAACTCAGTACCTCTCCCTGCT...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTCAGCAGGGCACACTaGGCTTCTTCTGTCCACACG | + |
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Preference number: 4 (lower is better) Translates to: ALTDSPTATNSPVLSILIFSRAH*ASSVHT Trigger: CGTGTGGACAGAAGAAGCCCAGTGTGCCCTGCTGAA...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAAACGTTTCTGTGATTaGCACATTCAGCAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTKRFCD*HIQQGT Trigger: TGTGCCCTGCTGAATGTGTCAATCACAGAAACGTTT...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CCA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTTGGAGCACACCATCATaGCCAGGCCGAGCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LTDSPTATNSPVLSILIFWSTPS*PGRAGW Trigger: CCATCCTGCTCGGCCTGGCCATGATGGTGTGCTCCA...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAGGAGGTCATGGTCCCTaGTTTTCTGGTAGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LALTDSPTATNSPVLSILGGHGP*FSGRYF Trigger: GAAATATCTACCAGAAAATCAGGGACCATGACCTCC...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAAAACGTTTCTGTGATTaGCACATTCAGCAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LALTDSPTATNSPVLSILKRFCD*HIQQGT Trigger: TGTGCCCTGCTGAATGTGTCAATCACAGAAACGTTT...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTTGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTDSPTATNSPVLSILIFCRQGY*ESFQQS Trigger: CGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCA...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCATTCAGCAGGGCACACTaGGCTTCTTCTGTCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPFSRAH*ASSVHT Trigger: CGTGTGGACAGAAGAAGCCCAGTGTGCCCTGCTGAA...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACGTCCTGTCTGTAAGATaGAGAGGTCCGGCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNVLSVR*RGPATG Trigger: ACCAGTGGCCGGACCTCTTCATCTTACAGACAGGAC...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATAAAACGTTTCTGTGATTaGCACATTCAGCAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALTDSPTATNSPVLSILIKRFCD*HIQQGT Trigger: TGTGCCCTGCTGAATGTGTCAATCACAGAAACGTTT...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACTGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNCRQGY*ESFQQS Trigger: CGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCA...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATAAGAGTTTGGTCAGGATaGCACTCTTCTGGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALTDSPTATNSPVLSILIRVWSG*HSSGFL Trigger: AAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCT...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR GCA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTCACCATAGCAACGATTaGCACACCCCCAGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTDSPTATNSPVLSILIFHHSND*HTPSHH Trigger: ATGATGGCTGGGGGTGTGGCAATCGTTGCTATGGTG...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATAAGGATGACACTCTTCTaGTTTCCTTCTGGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALTDSPTATNSPVLSILIRMTLF*FPSGSE Trigger: TTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCT...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACAGTCCTGTCTGTAAGATaGAGAGGTCCGGCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTVLSVR*RGPATG Trigger: ACCAGTGGCCGGACCTCTTCATCTTACAGACAGGAC...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACATGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTCRQGY*ESFQQS Trigger: CGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCA...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACCACCATAGCAACGATTaGCACACCCCCAGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNHHSND*HTPSHH Trigger: ATGATGGCTGGGGGTGTGGCAATCGTTGCTATGGTG...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACATTCAGCAGGGCACACTaGGCTTCTTCTGTCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTFSRAH*ASSVHT Trigger: CGTGTGGACAGAAGAAGCCCAGTGTGCCCTGCTGAA...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGAGGATGACACTCTTCTaGTTTCCTTCTGGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCFILASVDGNPREHLRLRMTLF*FPSGSE Trigger: TTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCT...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
||
| CDS-3UTR CCA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTGGCCAGAAGAGAGAATaGAACAGCACATTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTDSPTATNSPVLSILIFGQKRE*NSTLEL Trigger: CAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCC...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACGCAGGAAGTACATCATaGTGGAGCACACCATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNAGSTS*WSTPSW Trigger: CCATGATGGTGTGCTCCATCATGATGTACTTCCTGC...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTAGATGGAAAAGGGACTaGGAGACATGGACTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTDSPTATNSPVLSILIFRWKRD*ETWTPQ Trigger: TTGAGGAGTCCATGTCTCTCAGTCCCTTTTCCATCT...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191869.6 |
||
| CDS-3UTR GCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTCACCATAGCAACGATTaGCACACCCCCAGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFIHHSND*HTPSHH Trigger: ATGATGGCTGGGGGTGTGGCAATCGTTGCTATGGTG...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACGGCCAGAAGAGAGAATaGAACAGCACATTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNGQKRE*NSTLEL Trigger: CAGCTCCAATGTGCTGTTCCATTCTCTCTTCTGGCC...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTGGAGGTCATGGTCCCTaGTTTTCTGGTAGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTDSPTATNSPVLSILIFGGHGP*FSGRYF Trigger: GAAATATCTACCAGAAAATCAGGGACCATGACCTCC...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCAGGAGGTCATGGTCCCTaGTTTTCTGGTAGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPGGHGP*FSGRYF Trigger: GAAATATCTACCAGAAAATCAGGGACCATGACCTCC...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTGCAGGAAGTACATCATaGTGGAGCACACCATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFIAGSTS*WSTPSW Trigger: CCATGATGGTGTGCTCCATCATGATGTACTTCCTGC...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCAAAACGTTTCTGTGATTaGCACATTCAGCAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPKRFCD*HIQQGT Trigger: TGTGCCCTGCTGAATGTGTCAATCACAGAAACGTTT...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCATATCTGTTGATCCGTTaGATCCTCTCACAAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPYLLIR*ILSQSR Trigger: CCTGCTTTGTGAGAGGATCCAACGGATCAACAGATA...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACAGAGTTTGGTCAGGATaGCACTCTTCTGGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKDDRLVPASKQYNETTNRVWSG*HSSGFL Trigger: AAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCT...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | ATGAAACAACCAACCAATGAGGAACAGTTAATTCTCCTGAATAATAAGGACATCAGCAGGGAGAGGTACTaGGTTAGTTTCACCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKQPTNEEQLILLNNKDISRERY*VSFTIA Trigger: TGCTATGGTGAAACTAACTCAGTACCTCTCCCTGCT...GATGTCCTTATTATTCAGGAGAATTAACTGTTCCTCATTGGTTGGTTGTTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACAAGCAGGGAGAGGTACTaGGTTAGTTTCACCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTSRERY*VSFTIA Trigger: TGCTATGGTGAAACTAACTCAGTACCTCTCCCTGCT...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTCTTCTGGTTTCCTTCTaGGTCAGAATAGCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFILLVSF*VRIAGE Trigger: TTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAG...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACACTTCTGGTTTCCTTCTaGGTCAGAATAGCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTLLVSF*VRIAGE Trigger: TTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAG...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCAAGCCATCATACAAGTTaGCCAGAAGAGAGAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPSHHTS*PEERME Trigger: TTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCT...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTGGAGGTCATGGTCCCTaGTTTTCTGGTAGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFIGGHGP*FSGRYF Trigger: GAAATATCTACCAGAAAATCAGGGACCATGACCTCC...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACAAAACGTTTCTGTGATTaGCACATTCAGCAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTKRFCD*HIQQGT Trigger: TGTGCCCTGCTGAATGTGTCAATCACAGAAACGTTT...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR TCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACAAGAGTTTGGTCAGGATaGCACTCTTCTGGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTRVWSG*HSSGFL Trigger: AAGGAAACCAGAAGAGTGTCATCCTGACCAAACTCT...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACAAGGATGACACTCTTCTaGTTTCCTTCTGGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTRMTLF*FPSGSE Trigger: TTCTGACCCAGAAGGAAACCAGAAGAGTGTCATCCT...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | ATAATAAGGACATCATGTTTGCATATAGGACAGCGTTTGCATTATTGCTCTACATATCTGTTGATCCGTTaGATCCTCTCACAAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIRTSCLHIGQRLHYCSTYLLIR*ILSQSR Trigger: CCTGCTTTGTGAGAGGATCCAACGGATCAACAGATA...TGTAGAGCAATAATGCAAACGCTGTCCTATATGCAAACATGATGTCCTTATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTTATCTGTTGATCCGTTaGATCCTCTCACAAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFIYLLIR*ILSQSR Trigger: CCTGCTTTGTGAGAGGATCCAACGGATCAACAGATA...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS-3UTR CCA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTAGCCATCATACAAGTTaGCCAGAAGAGAGAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMSKHQCEERLPSNLLFISHHTS*PEERME Trigger: TTCCATTCTCTCTTCTGGCCAACTTGTATGATGGCT...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
||
| CDS TCA 90 bp | TCCCCGGAAGATGTCAGGTTCACGTACACCTGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCGGGCCCACAGCTGAAGGAACAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPEDVRFTYTCRQGY*ESFQQSGPQLKEQL Trigger: TAACTGTTCCTTCAGCTGTGGGCCCGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCAGGTGTACGTGAACCTGACATCTTCCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS TCA 90 bp | TATCTGTTGATCCGTTGGATCCTCTCACAAAGCAGGGAGAGGTACTaGGTTAGTTTCACCATAGCAACGATTGCCACACCCCCAGCCATC | + |
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Preference number: 5 (lower is better) Translates to: YLLIRWILSQSRERY*VSFTIATIATPPAI Trigger: GATGGCTGGGGGTGTGGCAATCGTTGCTATGGTGAAACTAACTCAGTACCTCTCCCTGCTTTGTGAGAGGATCCAACGGATCAACAGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAGTCACAGTTTTCCTTTaGTCCAGGAGGTCATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LALTDSPTATNSPVLSILVTVFL*SRRSWS Trigger: GGACCATGACCTCCTGGACAAAAGGAAAACTGTGAC...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTIAGEV*VSPEVF Trigger: GAAAACTTCAGGAGACACCAACACTTCCCCTGCTAT...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCCAGCCATCATACAAGTaGGCCAGAAGAGAGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTQPSYK*ARRENG Trigger: TCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTG...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTACAGCCATCATACAAGTaGGCCAGAAGAGAGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: LALTDSPTATNSPVLSILQPSYK*ARRENG Trigger: TCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTG...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTATTATCTGTTGATCCGTaGGATCCTCTCACAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LALTDSPTATNSPVLSILLSVDP*DPLTKQ Trigger: CTGCTTTGTGAGAGGATCCAACGGATCAACAGATAA...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGGTCACAGTTTTCCTTTaGTCCAGGAGGTCATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VCFILASVDGNPREHLRLVTVFL*SRRSWS Trigger: GGACCATGACCTCCTGGACAAAAGGAAAACTGTGAC...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| CDS-3UTR CAA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATAATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ALTDSPTATNSPVLSILIIAGEV*VSPEVF Trigger: GAAAACTTCAGGAGACACCAACACTTCCCCTGCTAT...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | TATTCTGACATGATAGCTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAATATAGGAGCACTTTaGATTGATCTTCATGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: YSDMIAGPDRLTHCNQFTNIGAL*IDLHGL Trigger: GAGACCATGAAGATCAATCAAAAGTGCTCCTATATT...GGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAGCTATCATGTCAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VCFILASVDGNPREHLRLIAGEV*VSPEVF Trigger: GAAAACTTCAGGAGACACCAACACTTCCCCTGCTAT...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| CDS-3UTR CAA 90 bp | GCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTATCTGTTGATCCGTaGGATCCTCTCACAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ALTDSPTATNSPVLSILILSVDP*DPLTKQ Trigger: CTGCTTTGTGAGAGGATCCAACGGATCAACAGATAA...TATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | TATCTTTGTAACATAGACTTTCCAAAATTGCAATGGCATGCCTACCAACACCCAGTCACAGTTTTCCTTTaGTCCAGGAGGTCATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: YLCNIDFPKLQWHAYQHPVTVFL*SRRSWS Trigger: GGACCATGACCTCCTGGACAAAAGGAAAACTGTGAC...TGGGTGTTGGTAGGCATGCCATTGCAATTTTGGAAAGTCTATGTTACAAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | CTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAATATTTGTCACAGTTTTCCTTTaGTCCAGGAGGTCATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LTDSPTATNSPVLSILIFVTVFL*SRRSWS Trigger: GGACCATGACCTCCTGGACAAAAGGAAAACTGTGAC...AAATATTAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | CTGGCCCTGACAGACTCACCCACTGCAACCAATTCACCAGTCCTTAGTATATTAAATATAGGAGCACTTTaGATTGATCTTCATGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LALTDSPTATNSPVLSILNIGAL*IDLHGL Trigger: GAGACCATGAAGATCAATCAAAAGTGCTCCTATATT...TAATATACTAAGGACTGGTGAATTGGTTGCAGTGGGTGAGTCTGTCAGGGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGTTATCTGTTGATCCGTaGGATCCTCTCACAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VCFILASVDGNPREHLRLLSVDP*DPLTKQ Trigger: CTGCTTTGTGAGAGGATCCAACGGATCAACAGATAA...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| CDS-3UTR CAA 90 bp | ATGAAACAACCAACCAATGAGGAACAGTTAATTCTCCTGAATAATAAGGACATCGTCACAGTTTTCCTTTaGTCCAGGAGGTCATGGTCC | + |
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Preference number: 5 (lower is better) Translates to: MKQPTNEEQLILLNNKDIVTVFL*SRRSWS Trigger: GGACCATGACCTCCTGGACAAAAGGAAAACTGTGAC...GATGTCCTTATTATTCAGGAGAATTAACTGTTCCTCATTGGTTGGTTGTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | GTATGCTTCATCCTTGCATCAGTTGATGGGAATCCCAGGGAACATTTAAGATTGAATATAGGAGCACTTTaGATTGATCTTCATGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: VCFILASVDGNPREHLRLNIGAL*IDLHGL Trigger: GAGACCATGAAGATCAATCAAAAGTGCTCCTATATT...CAATCTTAAATGTTCCCTGGGATTCCCATCAACTGATGCAAGGATGAAGCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119970.8 ENSMUST00000178668.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RMSKHQCEERLPSNLLFIIAGEV*VSPEVF Trigger: GAAAACTTCAGGAGACACCAACACTTCCCCTGCTAT...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | AGAATGAGTAAACATCAATGTGAAGAAAGGCTTCCCTCAAACCTGTTATTCATTCAGCCATCATACAAGTaGGCCAGAAGAGAGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: RMSKHQCEERLPSNLLFIQPSYK*ARRENG Trigger: TCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTG...AATGAATAACAGGTTTGAGGGAAGCCTTTCTTCACATTGATGTTTACTCATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | ATGAAACAACCAACCAATGAGGAACAGTTAATTCTCCTGAATAATAAGGACATCCAGCCATCATACAAGTaGGCCAGAAGAGAGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: MKQPTNEEQLILLNNKDIQPSYK*ARRENG Trigger: TCCATTCTCTCTTCTGGCCAACTTGTATGATGGCTG...GATGTCCTTATTATTCAGGAGAATTAACTGTTCCTCATTGGTTGGTTGTTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACTTATCTGTTGATCCGTaGGATCCTCTCACAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: WKDDRLVPASKQYNETTNLSVDP*DPLTKQ Trigger: CTGCTTTGTGAGAGGATCCAACGGATCAACAGATAA...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS-3UTR CAA 90 bp | TGGAAAGACGACAGACTAGTTCCAGCATCAAAACAATATAATGAAACAACCAACAATATAGGAGCACTTTaGATTGATCTTCATGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: WKDDRLVPASKQYNETTNNIGAL*IDLHGL Trigger: GAGACCATGAAGATCAATCAAAAGTGCTCCTATATT...GTTGGTTGTTTCATTATATTGTTTTGATGCTGGAACTAGTCTGTCGTCTTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS TCA 72 bp | GATGTCAGGTTCACGTACACCTGCAGGCAAGGGTACTaGGAGAGCTTCCAACAGTCGGGCCCACAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: DVRFTYTCRQGY*ESFQQSGPQLK Trigger: CTTCAGCTGTGGGCCCGACTGTTGGAAGCTCTCTCAGTACCCTTGCCTGCAGGTGTACGTGAACCTGACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000191869.6 ENSMUST00000192429.6 |
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| CDS CAA 72 bp | CTGGTTTCCTTCTGGGTCAGAATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTCCATGACGACACTCAC | + |
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Preference number: 6 (lower is better) Translates to: LVSFWVRIAGEV*VSPEVFHDDTH Trigger: GTGAGTGTCGTCATGGAAAACTTCAGGAGACACCAACACTTCCCCTGCTATTCTGACCCAGAAGGAAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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| CDS CAA 90 bp | GACACTCTTCTGGTTTCCTTCTGGGTCAGAATAGCAGGGGAAGTGTaGGTGTCTCCTGAAGTTTTCCATGACGACACTCACGAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: DTLLVSFWVRIAGEV*VSPEVFHDDTHERH Trigger: ATGTCTCTCGTGAGTGTCGTCATGGAAAACTTCAGGAGACACCAACACTTCCCCTGCTATTCTGACCCAGAAGGAAACCAGAAGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119310.8 ENSMUST00000119970.8 ENSMUST00000178668.2 ENSMUST00000192429.6 |
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