Pregenerated sensors for KCNMB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020155Ensembl transcript IDs: ENSMUST00000020362.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCACACTCACGCTGCCCATGCAGTTCTGTGACCACGGATGGGTGTaGCTTTTGATGGAAGTAGGCCAGTCCTTGTTGACAGGACGGCAA | + |
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Preference number: 1 (lower is better) Translates to: FTLTLPMQFCDHGWV*LLMEVGQSLLTGRQ Trigger: TTGCCGTCCTGTCAACAAGGACTGGCCTACTTCCATCAAAAGCCACACCCATCCGTGGTCACAGAACTGCATGGGCAGCGTGAGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 90 bp | CTTCCATCCAGGGGGCCTAACAACTGTGTCTTCCCAGCTTGTCTCTaGTGGGAGAAACAGCCTCTCGAAGCCCATCCTCATCTCCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: LPSRGPNNCVFPACL*WEKQPLEAHPHLPK Trigger: TTTAGGGAGATGAGGATGGGCTTCGAGAGGCTGTTTCTCCCATCAGAGACAAGCTGGGAAGACACAGTTGTTAGGCCCCCTGGATGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 90 bp | CACAGTTTCACACTCACGCTGCCCATGCAGTTCTGTGACCACGGATaGGTGTGGCTTTTGATGGAAGTAGGCCAGTCCTTGTTGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: HSFTLTLPMQFCDHG*VWLLMEVGQSLLTG Trigger: TCCTGTCAACAAGGACTGGCCTACTTCCATCAAAAGCCACACCCATCCGTGGTCACAGAACTGCATGGGCAGCGTGAGTGTGAAACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTACACATGTGTGTGCACTTGAGTGCAGGTGCCCATaGAACCGAGAGGTATCAACCTCCCTGCAGCTGGAGTTACAGACA | + |
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Preference number: 1 (lower is better) Translates to: VCVCTHVCALECRCP*NREVSTSLQLELQT Trigger: TGTCTGTAACTCCAGCTGCAGGGAGGTTGATACCTCTCGGTTCCATGGGCACCTGCACTCAAGTGCACACACATGTGTACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 90 bp | AAGGTCGTCATGACTAATGCATGGGGCAAGGGAGCTGGGCATCCCTaGACACTGATTCTTCTAGAAGGGTGTGTCCTTTTCTCCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: KVVMTNAWGKGAGHP*TLILLEGCVLFSCC Trigger: ACAGCAGGAGAAAAGGACACACCCTTCTAGAAGAATCAGTGTGCAGGGATGCCCAGCTCCCTTGCCCCATGCATTAGTCATGACGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 90 bp | CCTTGTAACATTCACACATGGAAGAGGCCGGCTTTCTTCAAGTCATaGATTGAGTCACAGCCTTGGCTGAAGAGCTGGAGCTGTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PCNIHTWKRPAFFKS*IESQPWLKSWSCVR Trigger: CCTCACACAGCTCCAGCTCTTCAGCCAAGGCTGTGACTCAATTCATGACTTGAAGAAAGCCGGCCTCTTCCATGTGTGAATGTTACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 90 bp | TGGGTGTTTACTAGTCATCTGGAGACACTGCAGCATGGAGAAAGGTaGACAGAGCTTCCGCAACCGAGACTGCATCACTTTATAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: WVFTSHLETLQHGER*TELPQPRLHHFIEG Trigger: CCCTTCTATAAAGTGATGCAGTCTCGGTTGCGGAAGCTCTGTCCACCTTTCTCCATGCTGCAGTGTCTCCAGATGACTAGTAAACACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 90 bp | AGAGCTTCCGCAACCGAGACTGCATCACTTTATAGAAGGGATTTGTaGCATCTGAGCAAGTCGCAGAACTGGTCCCTGTGGATACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: RASATETASLYRRDL*HLSKSQNWSLWILK Trigger: CTTCAGTATCCACAGGGACCAGTTCTGCGACTTGCTCAGATGTCACAAATCCCTTCTATAAAGTGATGCAGTCTCGGTTGCGGAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 90 bp | AATAGACAGCTCCTTGAAGGCATCCATACACCTGACTCATATCCCTaGCCCTTCCAGGCTTCAGCCATTAGAGAGCACAGAACAAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NRQLLEGIHTPDSYP*PFQASAIREHRTSF Trigger: AAAGCTTGTTCTGTGCTCTCTAATGGCTGAAGCCTGGAAGGGCCAGGGATATGAGTCAGGTGTATGGATGCCTTCAAGGAGCTGTCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 90 bp | GTAGCATCTTGCAAACTCTACCATAATGTCAGAATATGGCTTTCCTaGCCTTGGAGGGAGATGCCTTGGGGAATGATGAGCTATTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: VASCKLYHNVRIWLS*PWREMPWGMMSYFS Trigger: GGAAAAATAGCTCATCATTCCCCAAGGCATCTCCCTCCAAGGTCAGGAAAGCCATATTCTGACATTATGGTAGAGTTTGCAAGATGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 90 bp | AAGCAGTACATTCAGTTGCCCTGTCAATGGGAATTATTGTTTTTATaGCAATTCAAAGAAGCTGAATTTGGCCAAGGACAACATCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: KQYIQLPCQWELLFL*QFKEAEFGQGQHPE Trigger: TTCAGGATGTTGTCCTTGGCCAAATTCAGCTTCTTTGAATTGTCATAAAAACAATAATTCCCATTGACAGGGCAACTGAATGTACTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR TCA 90 bp | ATCAGACCCAGGTCATCTGCAAGAGCCACACACACACCCTTAGCCACTGAGGCACCTGCTAGCCACATGTaGATCTCCCCGGTGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: IRPRSSARATHTPLATEAPASHM*ISPVVA Trigger: TGCTACCACCGGGGAGATTCACATGTGGCTAGCAGG...TGCCTCAGTGGCTAAGGGTGTGTGTGTGGCTCTTGCAGATGACCTGGGTCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 90 bp | CTCACGCTGCCCATGCAGTTCTGTGACCACGGATGGGTGTGGCTTTaGATGGAAGTAGGCCAGTCCTTGTTGACAGGACGGCAAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: LTLPMQFCDHGWVWL*MEVGQSLLTGRQKF Trigger: AAATTTTTGCCGTCCTGTCAACAAGGACTGGCCTACTTCCATCAAAAGCCACACCCATCCGTGGTCACAGAACTGCATGGGCAGCGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCCACCTCTAAGTCCATCACGCTCAAATGCCCACAGTTTCACACTCACGCTGGTCATCTGGAGACACTaGAGCATGGAGAAAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LPPLSPSRSNAHSFTLTLVIWRH*SMEKGG Trigger: TCCACCTTTCTCCATGCTGCAGTGTCTCCAGATGAC...CAGCGTGAGTGTGAAACTGTGGGCATTTGAGCGTGATGGACTTAGAGGTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR GCA 90 bp | ACATTAGATCAGAAGCCCAGGGGTCCTGATGACTCTGATCCCCATGTGGAGGCCGGTAATAATTGCATCTaGTGTGAGCATGGACGGACC | + |
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Preference number: 2 (lower is better) Translates to: TLDQKPRGPDDSDPHVEAGNNCI*CEHGRT Trigger: GGTCCGTCCATGCTCACAGCAGATGCAATTATTACC...GGCCTCCACATGGGGATCAGAGTCATCAGGACCCCTGGGCTTCTGATCTAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR GCA 90 bp | ATCAGACCCAGGTCATCTGCAAGAGCCACACACACACCCTTAGCCACTGAGGCATCCATCACGCTCAAATaGCCACAGTTTCACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: IRPRSSARATHTPLATEASITLK*PQFHTH Trigger: GTGAGTGTGAAACTGTGGGCATTTGAGCGTGATGGA...TGCCTCAGTGGCTAAGGGTGTGTGTGTGGCTCTTGCAGATGACCTGGGTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR TCA 90 bp | ACATTAGATCAGAAGCCCAGGGGTCCTGATGACTCTGATCCCCATGTGGAGGCCAATCATTTTCAGCACTaGCGCTGTAGTGGGTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: TLDQKPRGPDDSDPHVEANHFQH*RCSGCL Trigger: TAAACACCCACTACAGCGTCAGTGCTGAAAATGATT...GGCCTCCACATGGGGATCAGAGTCATCAGGACCCCTGGGCTTCTGATCTAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR TCA 90 bp | CAGATTGAAAGTATTTGGGTAATAATTGCATCTGCTGTGAGCATGGACGGACCCTCTGCAGTTCCTTGGTaGGTCTCTGCTGTGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QIESIWVIIASAVSMDGPSAVPW*VSAVVQ Trigger: CTGCACCACAGCAGAGACTCACCAAGGAACTGCAGA...GGGTCCGTCCATGCTCACAGCAGATGCAATTATTACCCAAATACTTTCAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTGGGTGTTTACTAGTCATCTGGAGACACTGCAGCATGGAGAAAGGTGGAGGGATTTGTGACATCTaGGCAAGTCGCAGAACTGGT | + |
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Preference number: 2 (lower is better) Translates to: CSGCLLVIWRHCSMEKGGGICDI*ASRRTG Trigger: ACCAGTTCTGCGACTTGCTCAGATGTCACAAATCCC...TCCACCTTTCTCCATGCTGCAGTGTCTCCAGATGACTAGTAAACACCCACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CCA 90 bp | ATACCTGGAGGGGTCGCAACCTACAGATTGAGAATTACTGTTTTAATGAGGAACATGGGGCAAGGGAGCTaGGCATCCCTGCACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: IPGGVATYRLRITVLMRNMGQGS*ASLHTD Trigger: ATCAGTGTGCAGGGATGCCCAGCTCCCTTGCCCCAT...GTTCCTCATTAAAACAGTAATTCTCAATCTGTAGGTTGCGACCCCTCCAGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CCA 90 bp | GGATCTGTATCGGCAGGTTCTGCCCCATTGGATTCAATCAAGGGCAGATTGAAACCTGAATGTGATGGGTaGGTATTTGGGGAGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: GSVSAGSAPLDSIKGRLKPECDG*VFGELR Trigger: TCTTAGCTCCCCAAATACCCACCCATCACATTCAGG...TTTCAATCTGCCCTTGATTGAATCCAATGGGGCAGAACCTGCCGATACAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATCCTGGTAGCAGACAGCGTCATTGCAGGTAACAGATATGAACCAACTGAAATGGGAAGCTGTAACTaGGAGCTTCTTGGTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: IILVADSVIAGNRYEPTEMGSCN*ELLGPP Trigger: TGGAGGACCAAGAAGCTCCCAGTTACAGCTTCCCAT...TTCAGTTGGTTCATATCTGTTACCTGCAATGACGCTGTCTGCTACCAGGATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTGGGTGTTTACTAGTCATCTGGAGACACTGCAGCATGGAGAAAGGTGGAGCTTTCCAAAGATGTTaGACAAATGAAATAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: CSGCLLVIWRHCSMEKGGAFQRC*TNEIGD Trigger: GTCTCCTATTTCATTTGTTCAACATCTTTGGAAAGC...TCCACCTTTCTCCATGCTGCAGTGTCTCCAGATGACTAGTAAACACCCACTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR TCA 90 bp | ATACCTGGAGGGGTCGCAACCTACAGATTGAGAATTACTGTTTTAATGAGGAACACAATTCAAAGAAGCTaGATTTGGCCAAGGACAACA | + |
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Preference number: 2 (lower is better) Translates to: IPGGVATYRLRITVLMRNTIQRS*IWPRTT Trigger: TGTTGTCCTTGGCCAAATTCAGCTTCTTTGAATTGT...GTTCCTCATTAAAACAGTAATTCTCAATCTGTAGGTTGCGACCCCTCCAGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 72 bp | AGGACAGGGGAGGCCTCTCTGTTCCCAGGCAGCCATTaGTGCCAAGATCATCTTTCTCCCACCTCTAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: RTGEASLFPGSH*CQDHLSPTSKS Trigger: GGACTTAGAGGTGGGAGAAAGATGATCTTGGCAGCAATGGCTGCCTGGGAACAGAGAGGCCTCCCCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | ATCAGACCCAGGTCATCTGCAAGAGCCACACACACACCCTTAGCCACTGAGGCAGGATGGGTGTGGCTTTaGATGGAAGTAGGCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: IRPRSSARATHTPLATEAGWVWL*MEVGQS Trigger: GGACTGGCCTACTTCCATCAAAAGCCACACCCATCC...TGCCTCAGTGGCTAAGGGTGTGTGTGTGGCTCTTGCAGATGACCTGGGTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 72 bp | ACAGGGGAGGCCTCTCTGTTCCCAGGCAGCCATTGCTaGCAAGATCATCTTTCTCCCACCTCTAAGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: TGEASLFPGSHC*QDHLSPTSKSI Trigger: GATGGACTTAGAGGTGGGAGAAAGATGATCTTGGCAGCAATGGCTGCCTGGGAACAGAGAGGCCTCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | ACATTAGATCAGAAGCCCAGGGGTCCTGATGACTCTGATCCCCATGTGGAGGCCATGAGCTATTTTTCCTaGAGAGGAGGGGCCACGGAT | + |
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Preference number: 3 (lower is better) Translates to: TLDQKPRGPDDSDPHVEAMSYFS*RGGATD Trigger: ATCCGTGGCCCCTCCTCTCAAGGAAAAATAGCTCAT...GGCCTCCACATGGGGATCAGAGTCATCAGGACCCCTGGGCTTCTGATCTAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 72 bp | CGCTGTAGTGGGTGTTTACTAGTCATCTGGAGACACTaGAGCATGGAGAAAGGTGGACAGAGCTTCCGCAAC | + |
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Preference number: 3 (lower is better) Translates to: RCSGCLLVIWRH*SMEKGGQSFRN Trigger: GTTGCGGAAGCTCTGTCCACCTTTCTCCATGCTGCAGTGTCTCCAGATGACTAGTAAACACCCACTACAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTACACATGTGTGTGCACTTGAGTaGAGGTGCCCATGGAACCGAGAGGTATCAACCTCC | + |
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Preference number: 3 (lower is better) Translates to: CVCVCTHVCALE*RCPWNREVSTS Trigger: GGAGGTTGATACCTCTCGGTTCCATGGGCACCTGCACTCAAGTGCACACACATGTGTACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 72 bp | CTCCTTGAAGGCATCCATACACCTGACTCATATCCCTaGCCCTTCCAGGCTTCAGCCATTAGAGAGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: LLEGIHTPDSYP*PFQASAIREHR Trigger: TCTGTGCTCTCTAATGGCTGAAGCCTGGAAGGGCCAGGGATATGAGTCAGGTGTATGGATGCCTTCAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCCACCTCTAAGTCCATCACGCTCAAATGCCCACAGTTTCACACTCACGCTGCTGTGTCTTCCCAGCTaGTCTCTGATGGGAGAAACA | + |
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Preference number: 3 (lower is better) Translates to: LPPLSPSRSNAHSFTLTLLCLPS*SLMGET Trigger: TGTTTCTCCCATCAGAGACAAGCTGGGAAGACACAG...CAGCGTGAGTGTGAAACTGTGGGCATTTGAGCGTGATGGACTTAGAGGTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | GGATCTGTATCGGCAGGTTCTGCCCCATTGGATTCAATCAAGGGCAGATTGAAAGGACTCTGCAGTTCCTaGGTGAGTCTCTGCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: GSVSAGSAPLDSIKGRLKGLCSS*VSLCCG Trigger: ACCACAGCAGAGACTCACCAAGGAACTGCAGAGTCC...TTTCAATCTGCCCTTGATTGAATCCAATGGGGCAGAACCTGCCGATACAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCCCTTCCAGGCTTCAGCCATTAGAGAGCACAGAACAAGCTTTTCCCTTTTGGAGGGAGATGCCTaGGGGAATGATGAGCTATTT | + |
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Preference number: 3 (lower is better) Translates to: PWPFQASAIREHRTSFSLLEGDA*GNDELF Trigger: AAATAGCTCATCATTCCCCAAGGCATCTCCCTCCAA...AAGGGAAAAGCTTGTTCTGTGCTCTCTAATGGCTGAAGCCTGGAAGGGCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | ATCAGACCCAGGTCATCTGCAAGAGCCACACACACACCCTTAGCCACTGAGGCAAAAATAGACAGCTCCTaGAAGGCATCCATACACCTG | + |
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Preference number: 3 (lower is better) Translates to: IRPRSSARATHTPLATEAKIDSS*KASIHL Trigger: CAGGTGTATGGATGCCTTCAAGGAGCTGTCTATTTT...TGCCTCAGTGGCTAAGGGTGTGTGTGTGGCTCTTGCAGATGACCTGGGTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | CACATGGAAGAGGCCGGCTTTCTTCAAGTCATGAATTaGGTCACAGCCTTGGCTGAAGAGCTGGAGCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: HMEEAGFLQVMN*VTALAEELELC Trigger: ACACAGCTCCAGCTCTTCAGCCAAGGCTGTGACTCAATTCATGACTTGAAGAAAGCCGGCCTCTTCCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTACACATGTGTGTGCACTTaGGTGCAGGTGCCCATGGAACCGAGAGGTATCAAC | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVYTCVCT*VQVPMEPRGIN Trigger: GTTGATACCTCTCGGTTCCATGGGCACCTGCACTCAAGTGCACACACATGTGTACACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 72 bp | ATGACTAATGCATGGGGCAAGGGAGCTGGGCATCCCTaGACACTGATTCTTCTAGAAGGGTGTGTCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: MTNAWGKGAGHP*TLILLEGCVLF Trigger: GAAAAGGACACACCCTTCTAGAAGAATCAGTGTGCAGGGATGCCCAGCTCCCTTGCCCCATGCATTAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR GCA 72 bp | CATCTTTCTCCCACCTCTAAGTCCATCACGCTCAAATaGCCACAGTTTCACACTCACGCTGCCCATGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: HLSPTSKSITLK*PQFHTHAAHAV Trigger: AACTGCATGGGCAGCGTGAGTGTGAAACTGTGGGCATTTGAGCGTGATGGACTTAGAGGTGGGAGAAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | GCAACCGAGACTGCATCACTTTATAGAAGGGATTTGTaGCATCTGAGCAAGTCGCAGAACTGGTCCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: ATETASLYRRDL*HLSKSQNWSLW Trigger: CCACAGGGACCAGTTCTGCGACTTGCTCAGATGTCACAAATCCCTTCTATAAAGTGATGCAGTCTCGGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 72 bp | ATGAACCAACTGAAGTCAGGGATGGGAAGCTGTAACTaGGAGCTTCTTGGTCCTCCAAAGTCACTGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: MNQLKSGMGSCN*ELLGPPKSLGI Trigger: GATTCCCAGTGACTTTGGAGGACCAAGAAGCTCCCAGTTACAGCTTCCCATCCCTGACTTCAGTTGGTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CCA 72 bp | AAGTGTCAAATCCAGTGTGGTGACATCATCTGCATGTaGAGAGAACACCAAAAGGCACGGCAGCACAACCTG | + |
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Preference number: 3 (lower is better) Translates to: KCQIQCGDIICM*REHQKARQHNL Trigger: CAGGTTGTGCTGCCGTGCCTTTTGGTGTTCTCTCCACATGCAGATGATGTCACCACACTGGATTTGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | ATGGTAGTTGTAAGAAAGAGCCCTGCTAGCCACATGTaGATCTCCCCGGTGGTAGCATCTTGCAAACTCTAC | + |
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Preference number: 3 (lower is better) Translates to: MVVVRKSPASHM*ISPVVASCKLY Trigger: GTAGAGTTTGCAAGATGCTACCACCGGGGAGATTCACATGTGGCTAGCAGGGCTCTTTCTTACAACTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGACAGCGTCATTGCAGGTAACAGATATGAACCAACTGAAGTCAGGGATGGGATCGGATACGCATTCTaGAGCAAGAAACAGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: ADSVIAGNRYEPTEVRDGIGYAF*SKKQLS Trigger: GGAAAGCTGTTTCTTGCTCAAGAATGCGTATCCGAT...CCCATCCCTGACTTCAGTTGGTTCATATCTGTTACCTGCAATGACGCTGTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR-3UTR CAA 90 bp | TGTAGTGGGTGTTTACTAGTCATCTGGAGACACTGCAGCATGGAGAAAGGTGGATCAAAGAAGCTGAATTaGGCCAAGGACAACATCCTG | + |
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Preference number: 3 (lower is better) Translates to: CSGCLLVIWRHCSMEKGGSKKLN*AKDNIL Trigger: CAGGATGTTGTCCTTGGCCAAATTCAGCTTCTTTGA...TCCACCTTTCTCCATGCTGCAGTGTCTCCAGATGACTAGTAAACACCCACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | TGCAAACTCTACCATAATGTCAGAATATGGCTTTCCTaGCCTTGGAGGGAGATGCCTTGGGGAATGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: CKLYHNVRIWLS*PWREMPWGMMS Trigger: GCTCATCATTCCCCAAGGCATCTCCCTCCAAGGTCAGGAAAGCCATATTCTGACATTATGGTAGAGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | GTCCTCCAAAGTCACTGGGAATCGGATACGCATTCTTaGGCAAGAAACAGCTTTCCAAAGATGTTGAACAAA | + |
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Preference number: 3 (lower is better) Translates to: VLQSHWESDTHS*ARNSFPKMLNK Trigger: TTTGTTCAACATCTTTGGAAAGCTGTTTCTTGCTCAAGAATGCGTATCCGATTCCCAGTGACTTTGGAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | CAGGTTCTGCCCCATTGGATTCAATCAAGGGCAGATTaGAAGTATTTGGGTAATAATTGCATCTGCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: QVLPHWIQSRAD*KYLGNNCICCE Trigger: CTCACAGCAGATGCAATTATTACCCAAATACTTTCAATCTGCCCTTGATTGAATCCAATGGGGCAGAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | CTGGACTCCAATCAGTGTTCCATATTTGATCAGCTATaGTATGTATATCATGCTGCCTTGATCTGGAATGTC | + |
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Preference number: 3 (lower is better) Translates to: LDSNQCSIFDQL*YVYHAALIWNV Trigger: GACATTCCAGATCAAGGCAGCATGATATACATATCATAGCTGATCAAATATGGAACACTGATTGGAGTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR TCA 72 bp | AACCAAGCAGCTGGACTCCAATCAGTGTTCCATATTTaGTCAGCTATGATATGTATATCATGCTGCCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: NQAAGLQSVFHI*SAMICISCCLD Trigger: ATCAAGGCAGCATGATATACATATCATAGCTGATCAAATATGGAACACTGATTGGAGTCCAGCTGCTTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CCA 90 bp | ATCAGACCCAGGTCATCTGCAAGAGCCACACACACACCCTTAGCCACTGAGGCACGGTCAGCAGGAAGGTaGGCCAGAAGAAGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: IRPRSSARATHTPLATEARSAGR*ARRRRR Trigger: TCTTCTCCTTCTTCTGGCCCACCTTCCTGCTGACCG...TGCCTCAGTGGCTAAGGGTGTGTGTGTGGCTCTTGCAGATGACCTGGGTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 72 bp | CCCATGCAGTTCTGTGACCACGGATGGGTGTGGCTTTaGATGGAAGTAGGCCAGTCCTTGTTGACAGGACGG | + |
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Preference number: 4 (lower is better) Translates to: PMQFCDHGWVWL*MEVGQSLLTGR Trigger: CCGTCCTGTCAACAAGGACTGGCCTACTTCCATCAAAAGCCACACCCATCCGTGGTCACAGAACTGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR TCA 90 bp | CTCCCACCTCTAAGTCCATCACGCTCAAATGCCCACAGTTTCACACTCACGCTGGAGCACTGTTGGTTTTaGTCCCGAGTGTCTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPLSPSRSNAHSFTLTLEHCWF*SRVSSV Trigger: CACGGAAGACACTCGGGATCAAAACCAACAGTGCTC...CAGCGTGAGTGTGAAACTGTGGGCATTTGAGCGTGATGGACTTAGAGGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CCA 90 bp | ACATTAGATCAGAAGCCCAGGGGTCCTGATGACTCTGATCCCCATGTGGAGGCCATTGACCCAAAGGCATaGGTACTGGGGCACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLDQKPRGPDDSDPHVEAIDPKA*VLGHLL Trigger: AAGAAGGTGCCCCAGTACCCATGCCTTTGGGTCAAT...GGCCTCCACATGGGGATCAGAGTCATCAGGACCCCTGGGCTTCTGATCTAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CCA 90 bp | AAGGTGGACAGAGCTTCCGCAACCGAGACTGCATCACTTTATAGAAGGGATTTGGTCTCTCCGCGCTTCTaGGCCATCACCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVDRASATETASLYRRDLVSPRF*AITSFF Trigger: GAAGAAGCTGGTGATGGCCCAGAAGCGCGGAGAGAC...CAAATCCCTTCTATAAAGTGATGCAGTCTCGGTTGCGGAAGCTCTGTCCACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTACACATGTGTGTGCACTaGAGTGCAGGTGCCCATGGAACCGAGAGGTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVHMCVH*SAGAHGTERYQ Trigger: TTGATACCTCTCGGTTCCATGGGCACCTGCACTCAAGTGCACACACATGTGTACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR TCA 90 bp | ATCATCCTGGTAGCAGACAGCGTCATTGCAGGTAACAGATATGAACCAACTGAACGACGCTGGTCTCGTTaGCTTGAGGTGCAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IILVADSVIAGNRYEPTERRWSR*LEVQKG Trigger: GCCTTTCTGCACCTCAAGTCAACGAGACCAGCGTCG...TTCAGTTGGTTCATATCTGTTACCTGCAATGACGCTGTCTGCTACCAGGATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CCA 90 bp | CCCTGGCCCTTCCAGGCTTCAGCCATTAGAGAGCACAGAACAAGCTTTTCCCTTCAATCAAGTGACATATaGATTCCTGGGTCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PWPFQASAIREHRTSFSLQSSDI*IPGSTH Trigger: GTGTGTGGACCCAGGAATCCATATGTCACTTGATTG...AAGGGAAAAGCTTGTTCTGTGCTCTCTAATGGCTGAAGCCTGGAAGGGCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 72 bp | CAGAATATGGCTTTCCTGACCTTGGAGGGAGATGCCTaGGGGAATGATGAGCTATTTTTCCTTGAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNMAFLTLEGDA*GNDELFFLERR Trigger: CCTCCTCTCAAGGAAAAATAGCTCATCATTCCCCAAGGCATCTCCCTCCAAGGTCAGGAAAGCCATATTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CCA 90 bp | GGATCTGTATCGGCAGGTTCTGCCCCATTGGATTCAATCAAGGGCAGATTGAAAAGTTGTCCAGGTTCCTaGGGATATAGGAGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAGSAPLDSIKGRLKSCPGS*GYRSTV Trigger: AACAGTGCTCCTATATCCCCAGGAACCTGGACAACT...TTTCAATCTGCCCTTGATTGAATCCAATGGGGCAGAACCTGCCGATACAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR TCA 90 bp | ATGAACCAACTGAAGTCAGGGATGGGAAGCTGTAACTGGGAGCTTCTTGGTCCTTATAGAAATTGGCTCTaGCCTTCTTCACATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MNQLKSGMGSCNWELLGPYRNWL*PSSHLP Trigger: TGGCAGATGTGAAGAAGGTCAGAGCCAATTTCTATA...AGGACCAAGAAGCTCCCAGTTACAGCTTCCCATCCCTGACTTCAGTTGGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR GCA 90 bp | ATGAACCAACTGAAGTCAGGGATGGGAAGCTGTAACTGGGAGCTTCTTGGTCCTCTCGTTGACTTGAGGTaGAGAAAGGCAATAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: MNQLKSGMGSCNWELLGPLVDLR*RKAIEF Trigger: GAATTCTATTGCCTTTCTGCACCTCAAGTCAACGAG...AGGACCAAGAAGCTCCCAGTTACAGCTTCCCATCCCTGACTTCAGTTGGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 72 bp | GGTCCTCCAAAGTCACTGGGAATCGGATACGCATTCTaGAGCAAGAAACAGCTTTCCAAAGATGTTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GPPKSLGIGYAF*SKKQLSKDVEQ Trigger: TTGTTCAACATCTTTGGAAAGCTGTTTCTTGCTCAAGAATGCGTATCCGATTCCCAGTGACTTTGGAGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR TCA 90 bp | ATCATCCTGGTAGCAGACAGCGTCATTGCAGGTAACAGATATGAACCAACTGAATTAGTTTCAATCAAGTaGCATATGGATTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IILVADSVIAGNRYEPTELVSIK*HMDSWV Trigger: GACCCAGGAATCCATATGTCACTTGATTGAAACTAA...TTCAGTTGGTTCATATCTGTTACCTGCAATGACGCTGTCTGCTACCAGGATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 72 bp | GGTTATTCAATACCTGGAGGGGTCGCAACCTACAGATaGAGAATTACTGTTTTAATGAGGAACTTGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GYSIPGGVATYR*RITVLMRNLES Trigger: TGATTCCAAGTTCCTCATTAAAACAGTAATTCTCAATCTGTAGGTTGCGACCCCTCCAGGTATTGAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| 3UTR CAA 72 bp | AATTATTGTTTTTATGACAATTCAAAGAAGCTGAATTaGGCCAAGGACAACATCCTGAATGTGATGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYCFYDNSKKLN*AKDNILNVMGG Trigger: CCCACCCATCACATTCAGGATGTTGTCCTTGGCCAAATTCAGCTTCTTTGAATTGTCATAAAAACAATAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS GCA 90 bp | AGTTGTACCCAGGACGTAGTAGGTGATGGCAGCACACACTACCATTaGCACTCCCAGGCAGAGGGCTCGTGTCTCTCCGCGCTTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCTQDVVGDGSTHYH*HSQAEGSCLSALLG Trigger: GCCCAGAAGCGCGGAGAGACACGAGCCCTCTGCCTGGGAGTGGCAATGGTAGTGTGTGCTGCCATCACCTACTACGTCCTGGGTACAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCCTTCCAGGCTTCAGCCATTAGAGAGCACAGAACAAGCTTTTCCCTTGGAGAAGAGGAGGACTaGGGGCCCGTAGAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PWPFQASAIREHRTSFSLGEEED*GPVEAL Trigger: CAGCGCCTCTACGGGCCCCAAGTCCTCCTCTTCTCC...AAGGGAAAAGCTTGTTCTGTGCTCTCTAATGGCTGAAGCCTGGAAGGGCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 90 bp | TTTTCTGGTAGAGGGGCAGCACAGTTGTACCCAGGACGTAGTAGGTaGTGGCAGCACACACTACCATTGCCACTCCCAGGCAGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSGRGAAQLYPGRSR*WQHTLPLPLPGRGL Trigger: GAGCCCTCTGCCTGGGAGTGGCAATGGTAGTGTGTGCTGCCATCACCTACTACGTCCTGGGTACAACTGTGCTGCCCCTCTACCAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 90 bp | CTTCCGTGTGATACAGCATGGCCCATCTGCCCACAGCTGATACATTaGCCCAAAGGCATGGGTACTGGGGCACCTTCTTGCCCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPCDTAWPICPQLIH*PKGMGTGAPSCPPA Trigger: AGCTGGAGGGCAAGAAGGTGCCCCAGTACCCATGCCTTTGGGTCAATGTATCAGCTGTGGGCAGATGGGCCATGCTGTATCACACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 90 bp | CCGAGTGTCTTCCGTGTGATACAGCATGGCCCATCTGCCCACAGCTaGTACATTGACCCAAAGGCATGGGTACTGGGGCACCTTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVFRVIQHGPSAHS*YIDPKAWVLGHLLA Trigger: GGCAAGAAGGTGCCCCAGTACCCATGCCTTTGGGTCAATGTATCAGCTGTGGGCAGATGGGCCATGCTGTATCACACGGAAGACACTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCCTTCCAGGCTTCAGCCATTAGAGAGCACAGAACAAGCTTTTCCCTTCAGCACACACTACCATaGCCACTCCCAGGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PWPFQASAIREHRTSFSLQHTLP*PLPGRG Trigger: CCCTCTGCCTGGGAGTGGCAATGGTAGTGTGTGCTG...AAGGGAAAAGCTTGTTCTGTGCTCTCTAATGGCTGAAGCCTGGAAGGGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS CCA 90 bp | GCCCATCTGCCCACAGCTGATACATTGACCCAAAGGCATGGGTACTaGGGCACCTTCTTGCCCTCCAGCTCTTCCTGGTCCTTGATATTA | + |
|
Preference number: 5 (lower is better) Translates to: AHLPTADTLTQRHGY*GTFLPSSSSWSLIL Trigger: TAATATCAAGGACCAGGAAGAGCTGGAGGGCAAGAAGGTGCCCCAGTACCCATGCCTTTGGGTCAATGTATCAGCTGTGGGCAGATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 90 bp | GGACTTGGGGCCCGTAGAGGCGCTGGTACACGACGCTGGTCTCGTTaGCTTGAGGTGCAGAAAGGCAATAGAATTCATGGTGCTTATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLGARRGAGTRRWSR*LEVQKGNRIHGAYR Trigger: TCTATAAGCACCATGAATTCTATTGCCTTTCTGCACCTCAAGTCAACGAGACCAGCGTCGTGTACCAGCGCCTCTACGGGCCCCAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS CCA 90 bp | CCTTCTTCACATCTGCCAAGGCTGTCTGGTAGTTGTCCAGGTTCCTaGGGATATAGGAGCACTGTTGGTTTTGATCCCGAGTGTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSSHLPRLSGSCPGS*GYRSTVGFDPECLP Trigger: CGGAAGACACTCGGGATCAAAACCAACAGTGCTCCTATATCCCCAGGAACCTGGACAACTACCAGACAGCCTTGGCAGATGTGAAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CAA 90 bp | ACATTAGATCAGAAGCCCAGGGGTCCTGATGACTCTGATCCCCATGTGGAGGCCATGGATAGGGACCTGTaGAGCTTCACCATGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: TLDQKPRGPDDSDPHVEAMDRDL*SFTMAI Trigger: TATTGCCATGGTGAAGCTCAACAGGTCCCTATCCAT...GGCCTCCACATGGGGATCAGAGTCATCAGGACCCCTGGGCTTCTGATCTAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS GCA 90 bp | CCCGTAGAGGCGCTGGTACACGACGCTGGTCTCGTTGACTTGAGGTaGAGAAAGGCAATAGAATTCATGGTGCTTATAGAAATTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVEALVHDAGLVDLR*RKAIEFMVLIEIGS Trigger: AGAGCCAATTTCTATAAGCACCATGAATTCTATTGCCTTTCTGCACCTCAAGTCAACGAGACCAGCGTCGTGTACCAGCGCCTCTACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS-3UTR CAA 90 bp | CAGATTGAAAGTATTTGGGTAATAATTGCATCTGCTGTGAGCATGGACGGACCCAGAGGGGCAGCACAGTaGTACCCAGGACGTAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QIESIWVIIASAVSMDGPRGAAQ*YPGRSR Trigger: CCTACTACGTCCTGGGTACAACTGTGCTGCCCCTCT...GGGTCCGTCCATGCTCACAGCAGATGCAATTATTACCCAAATACTTTCAATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 72 bp | AGAGGGGCAGCACAGTTGTACCCAGGACGTAGTAGGTaGTGGCAGCACACACTACCATTGCCACTCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGAAQLYPGRSR*WQHTLPLPLPG Trigger: GCCTGGGAGTGGCAATGGTAGTGTGTGCTGCCATCACCTACTACGTCCTGGGTACAACTGTGCTGCCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS CCA 72 bp | CCCACAGCTGATACATTGACCCAAAGGCATGGGTACTaGGGCACCTTCTTGCCCTCCAGCTCTTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTADTLTQRHGY*GTFLPSSSSWS Trigger: GGACCAGGAAGAGCTGGAGGGCAAGAAGGTGCCCCAGTACCCATGCCTTTGGGTCAATGTATCAGCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 72 bp | TTCCGTGTGATACAGCATGGCCCATCTGCCCACAGCTaGTACATTGACCCAAAGGCATGGGTACTGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FRVIQHGPSAHS*YIDPKAWVLGH Trigger: GTGCCCCAGTACCCATGCCTTTGGGTCAATGTATCAGCTGTGGGCAGATGGGCCATGCTGTATCACACGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS CCA 72 bp | CATCTGCCAAGGCTGTCTGGTAGTTGTCCAGGTTCCTaGGGATATAGGAGCACTGTTGGTTTTGATCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: HLPRLSGSCPGS*GYRSTVGFDPE Trigger: CTCGGGATCAAAACCAACAGTGCTCCTATATCCCCAGGAACCTGGACAACTACCAGACAGCCTTGGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS CAA 72 bp | GTAGAGGCGCTGGTACACGACGCTGGTCTCGTTGACTaGAGGTGCAGAAAGGCAATAGAATTCATGGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VEALVHDAGLVD*RCRKAIEFMVL Trigger: AAGCACCATGAATTCTATTGCCTTTCTGCACCTCAAGTCAACGAGACCAGCGTCGTGTACCAGCGCCTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS CAA 90 bp | TTGGGGCCCGTAGAGGCGCTGGTACACGACGCTGGTCTCGTTGACTaGAGGTGCAGAAAGGCAATAGAATTCATGGTGCTTATAGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: LGPVEALVHDAGLVD*RCRKAIEFMVLIEI Trigger: AATTTCTATAAGCACCATGAATTCTATTGCCTTTCTGCACCTCAAGTCAACGAGACCAGCGTCGTGTACCAGCGCCTCTACGGGCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS GCA 72 bp | GCGCTGGTACACGACGCTGGTCTCGTTGACTTGAGGTaGAGAAAGGCAATAGAATTCATGGTGCTTATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALVHDAGLVDLR*RKAIEFMVLIE Trigger: TTCTATAAGCACCATGAATTCTATTGCCTTTCTGCACCTCAAGTCAACGAGACCAGCGTCGTGTACCAGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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| CDS TCA 72 bp | AGCTCTTCCTGGTCCTTGATATTAGTTTCAATCAAGTaGCATATGGATTCCTGGGTCCACACACTTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSWSLILVSIK*HMDSWVHTLFW Trigger: CCAGAAAAGTGTGTGGACCCAGGAATCCATATGTCACTTGATTGAAACTAATATCAAGGACCAGGAAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020362.3 |
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