RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNMA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063142

Ensembl transcript IDs: ENSMUST00000065788.15, ENSMUST00000074983.13, ENSMUST00000100831.11, ENSMUST00000112423.10, ENSMUST00000145596.3, ENSMUST00000163322.3, ENSMUST00000172099.9, ENSMUST00000177634.8, ENSMUST00000179097.8, ENSMUST00000179836.8, ENSMUST00000188210.8, ENSMUST00000188285.7, ENSMUST00000188991.7, ENSMUST00000190044.7, ENSMUST00000190339.2, ENSMUST00000190985.8, ENSMUST00000212576.2, ENSMUST00000223655.2, ENSMUST00000223727.2, ENSMUST00000223749.2, ENSMUST00000224025.2, ENSMUST00000224077.2, ENSMUST00000224232.2, ENSMUST00000224285.2, ENSMUST00000224468.2, ENSMUST00000224787.2, ENSMUST00000224812.2, ENSMUST00000225315.2, ENSMUST00000225431.2, ENSMUST00000225471.2, ENSMUST00000225556.2, ENSMUST00000225794.2, ENSMUST00000226051.2

Found 1450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTCGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACT +
Preference number: 1 (lower is better)
Translates to: CRGTPWTWAGSADLL*TGWSGRRSSSYWTT
Trigger: AGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 90 bp GGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGACAGACTGGCCCGGGATTGGCCAGC +
Preference number: 1 (lower is better)
Translates to: GRDGVDGGALLTGRL*GVGGMRQTGPGLAS
Trigger: GCTGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp CTGTTTGTCGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGA +
Preference number: 1 (lower is better)
Translates to: LFVAGLPGLGPVRPI*CGRDGVDGGALLTG
Trigger: TCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp CTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: LDLGRFGRFAVDGME*TEELFLLDDCEEWE
Trigger: CTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp ACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATaGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGT +
Preference number: 1 (lower is better)
Translates to: TPWTWAGSADLLWTG*SGRRSSSYWTTVRS
Trigger: ACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 90 bp CACGAAGTGGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGACTACGACATGGCCACTCAGGACAG +
Preference number: 1 (lower is better)
Translates to: HEVASPGSGGQSGLS*HPQRCRLRHGHSGQ
Trigger: CTGTCCTGAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCCACTTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 90 bp GCTAGCACGAAGTGGCATCACCAGGTTCCGGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGATGCAGACTACGACATGGCCACTCAG +
Preference number: 1 (lower is better)
Translates to: ASTKWHHQVPEANQG*ADIPKDADYDMATQ
Trigger: CTGAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCCACTTCGTGCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 90 bp ACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGATTGGCCAGCGTTGTGGTCAAACTGC +
Preference number: 1 (lower is better)
Translates to: TEELFLLDDCEEWEE*DRLARDWPALWSNC
Trigger: GCAGTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp CTGGATGACTACCTCCTCCTGTCCTTCCCTATGACAACCTCCTCCTaGATGGCTACCTCCTGGATCCCTAGGGCAGGAAGTTCGGGGATG +
Preference number: 1 (lower is better)
Translates to: LDDYLLLSFPMTTSS*MATSWIPRAGSSGM
Trigger: CATCCCCGAACTTCCTGCCCTAGGGATCCAGGAGGTAGCCATCCAGGAGGAGGTTGTCATAGGGAAGGACAGGAGGAGGTAGTCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp GACCATCTAACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTaGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGAAGTGCATTCT +
Preference number: 1 (lower is better)
Translates to: DHLTGLTGPLGNGPC*PMSAECCSLLEVHS
Trigger: AGAATGCACTTCGAGGAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp GGAATGTTGACCCCAGTTGTGATGGACGGCTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGTGATGATCTGTCCATTCCAGGAGGT +
Preference number: 1 (lower is better)
Translates to: GMLTPVVMDGWRNIP*TGLLSGDDLSIPGG
Trigger: ACCTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp AAACCATTTCTTTTCTGTTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGG +
Preference number: 1 (lower is better)
Translates to: KPFLFCSVCRGTPWT*AGSADLLWTGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGAAATGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CCA 90 bp AGTTCCGTGATGATGGGAATGTTGACCCCAGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATGATCTG +
Preference number: 1 (lower is better)
Translates to: SSVMMGMLTPVVMDG*RNIPCTGLLSGDDL
Trigger: CAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCCCATCATCACGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp TCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATGAGACAGACTaGCCCGGGATTGGCCAGCGTTGTGGTCAAACTGCATCAGGCAGA +
Preference number: 1 (lower is better)
Translates to: SSYWTTVRSGRNETD*PGIGQRCGQTASGR
Trigger: TCTGCCTGATGCAGTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp GCCTTGAGCCAGACAGCTCTGGGCTATGAAACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATCACCCTCTTTCCAGTTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: ALSQTALGYETQLEL*KAYCVITLFPVPAG
Trigger: CCCAGCTGGAACTGGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGTTTCATAGCCCAGAGCTGTCTGGCTCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 90 bp CCTGGATGGCTACCTCCTGGATCCCTAGGGCAGGAAGTTCGGGGATaGTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGAAG +
Preference number: 1 (lower is better)
Translates to: PGWLPPGSLGQEVRG*FDRHMCCVCTFPSK
Trigger: CTTCGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTCCTGCCCTAGGGATCCAGGAGGTAGCCATCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp AGTAACCACAGTCTGACAAGTCACTGCAGGACAACGCCTACAAGGTaGAAGCACAGCTATATTGGCTCTGCAGGGAGTGGACAGAGGTGG +
Preference number: 1 (lower is better)
Translates to: SNHSLTSHCRTTPTR*KHSYIGSAGSGQRW
Trigger: CCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTGCAGTGACTTGTCAGACTGTGGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp CCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGACTACGACATaGCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGATG +
Preference number: 1 (lower is better)
Translates to: PIRAELTSPKMQTTT*PLRTVMAASLRVKM
Trigger: CATCTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp ATCTGTAAACCATTTCTTTTCTGTTCTGTTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGT +
Preference number: 1 (lower is better)
Translates to: ICKPFLFCSVCRGTP*TWAGSADLLWTGWS
Trigger: ACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGAAATGGTTTACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 90 bp CTGCAGGACAACGCCTACAAGGTGGAAGCACAGCTATATTGGCTCTaGAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGT +
Preference number: 1 (lower is better)
Translates to: LQDNAYKVEAQLYWL*REWTEVEAHFAYIG
Trigger: ACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp AAGTCACTGCAGGACAACGCCTACAAGGTGGAAGCACAGCTATATTaGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTAC +
Preference number: 1 (lower is better)
Translates to: KSLQDNAYKVEAQLY*LCREWTEVEAHFAY
Trigger: GTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTGCAGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp GCCAGCGTTGTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTAGGGAGGATTGGTGATGACGTACCT +
Preference number: 1 (lower is better)
Translates to: ASVVVKLHQAEDQVC*YELKLVGRIGDDVP
Trigger: AGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 90 bp ATGGCTACCTCCTGGATCCCTAGGGCAGGAAGTTCGGGGATGCTTTaGCAGGCACATGTGTTGTGTGTGTACATTTCCATCGAAGACTCT +
Preference number: 1 (lower is better)
Translates to: MATSWIPRAGSSGML*QAHVLCVYISIEDS
Trigger: AGAGTCTTCGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTCCTGCCCTAGGGATCCAGGAGGTAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 90 bp TTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTaGTGTTTCCTAAGACAGGCCCTGGGGAGCTTCGGGGTCAGCTTT +
Preference number: 1 (lower is better)
Translates to: LCVYISIEDSKQQDR*CFLRQALGSFGVSF
Trigger: AAAGCTGACCCCGAAGCTCCCCAGGGCCTGTCTTAGGAAACAGCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp AATGACCTCATAGAGAAGAGATTGGCAAGCATTGTGGAGAGGCCTTaGGCCAGACAGCTCTGGGCTATGAAACCCAACTTGAGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: NDLIEKRLASIVERP*ARQLWAMKPNLSSA
Trigger: TGCAGAGCTCAAGTTGGGTTTCATAGCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 90 bp CGACTTAATGGTGTACCAGGCAATATGGACACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTCTTGAGGTACTCAATGGAGCCCACA +
Preference number: 1 (lower is better)
Translates to: RLNGVPGNMDTFGKL*SVSHSLLRYSMEPT
Trigger: TGTGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACCATTAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp GTGCTGTTTCCTAAGACAGGCCCTGGGGAGCTTCGGGGTCAGCTTTaGAGGACAAGAAGAAACACAGAAGTTTCTCATGGGATAAACAGA +
Preference number: 1 (lower is better)
Translates to: VLFPKTGPGELRGQL*RTRRNTEVSHGINR
Trigger: TCTGTTTATCCCATGAGAAACTTCTGTGTTTCTTCTTGTCCTCCAAAGCTGACCCCGAAGCTCCCCAGGGCCTGTCTTAGGAAACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp AAGGTTCTGGGTGTGCTATGCATGAGGGATGAGGTACAACGGGGGTaGTATGAACTGATGAAAGGAGAGACCACCTCTCAAGACCTTTCT +
Preference number: 1 (lower is better)
Translates to: KVLGVLCMRDEVQRG*YELMKGETTSQDLS
Trigger: AGAAAGGTCTTGAGAGGTGGTCTCTCCTTTCATCAGTTCATATCACCCCCGTTGTACCTCATCCCTCATGCATAGCACACCCAGAACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp AGGTGGAAGCACAGCTATATTGGCTCTGCAGGGAGTGGACAGAGGTaGAAGCTCATTTTGCCTACATTGGTAATTGGAGTCCTTAGTGGA +
Preference number: 1 (lower is better)
Translates to: RWKHSYIGSAGSGQR*KLILPTLVIGVLSG
Trigger: TCCACTAAGGACTCCAATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp AACGCCTACAAGGTGGAAGCACAGCTATATTGGCTCTGCAGGGAGTaGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTGGAGT +
Preference number: 1 (lower is better)
Translates to: NAYKVEAQLYWLCRE*TEVEAHFAYIGNWS
Trigger: ACTCCAATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 90 bp GTAGTTTTTGATGGAGATCACTCTCATGATGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATACTTATTGGCAAGGATCAGGCATGC +
Preference number: 1 (lower is better)
Translates to: VVFDGDHSHDVGGIF*IRVSAILIGKDQAC
Trigger: GCATGCCTGATCCTTGCCAATAAGTATTGCGCTGACCCGGATGCAGAAGATGCCTCCAACATCATGAGAGTGATCTCCATCAAAAACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR TCA 90 bp CTGGGCATGCATGCAACAGCAGAGCTCAGACATCACGATTGCATCTaGTGGCTAGAAAAATCTTTTGACCACACGTTGAAGTGGCTGATA +
Preference number: 1 (lower is better)
Translates to: LGMHATAELRHHDCI*WLEKSFDHTLKWLI
Trigger: TATCAGCCACTTCAACGTGTGGTCAAAAGATTTTTCTAGCCATCAGATGCAATCGTGATGTCTGAGCTCTGCTGTTGCATGCATGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 90 bp TCTCCTCTTCTTTCTGTCCCTCTGCACTGCTCTGTCCTTGGGGTCTaGAGCAAACCATTACTTTTTATAGACTCTTTCAAACTGCCCATC +
Preference number: 1 (lower is better)
Translates to: SPLLSVPLHCSVLGV*SKPLLFIDSFKLPI
Trigger: GATGGGCAGTTTGAAAGAGTCTATAAAAAGTAATGGTTTGCTGCAGACCCCAAGGACAGAGCAGTGCAGAGGGACAGAAAGAAGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 90 bp AATCCTTGGGAATTAGCCTGCAAGACCCCGATGCTGTCATCAAACTaGATAGATTTGATGTTGAGTGACGCCAAGATGCATTCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: NPWELACKTPMLSSN*IDLMLSDAKMHSLS
Trigger: GGACAAGGAATGCATCTTGGCGTCACTCAACATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 90 bp GGCCTTGTTGTGATACTGCAGCATCTGAGTGATGATCCTGATCTTTaGGTGGTAGTTTTTGATGGAGATCACTCTCATGATGTTGGAGGC +
Preference number: 1 (lower is better)
Translates to: GLVVILQHLSDDPDL*VVVFDGDHSHDVGG
Trigger: GCCTCCAACATCATGAGAGTGATCTCCATCAAAAACTACCACCCAAAGATCAGGATCATCACTCAGATGCTGCAGTATCACAACAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR TCA 90 bp CTTCGAGTCAAGATGACTTTCTCAATCTCCTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCGTACTTTTTCACATTGGAGTCCATG +
Preference number: 1 (lower is better)
Translates to: LRVKMTFSISLGAHQ*NIPVESYFFTLESM
Trigger: CATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTTGACTCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp GGCAGCTTCACTTCGAGTCAAGATGACTTTCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCCAGTGGAGTCGTACTTTTTCACATT +
Preference number: 1 (lower is better)
Translates to: GSFTSSQDDFLNLLG*TPVKHSSGVVLFHI
Trigger: AATGTGAAAAAGTACGACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTTGACTCGAAGTGAAGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 90 bp CAAGACCCCGATGCTGTCATCAAACTGCATAGATTTGATGTTGAGTaGCGCCAAGATGCATTCCTTGTCCTGAAGCGAAGTATCATCAAT +
Preference number: 1 (lower is better)
Translates to: QDPDAVIKLHRFDVE*RQDAFLVLKRSIIN
Trigger: ATTGATGATACTTCGCTTCAGGACAAGGAATGCATCTTGGCGTCACTCAACATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp AAACCCAGCTCATCAGTGGTGGAGGTGAGGCTGAAGGTAAACCTTTaGATCTCCACTCTAAGAGCTTTCAAACTGGAGAATATAGAAATG +
Preference number: 1 (lower is better)
Translates to: KPSSSVVEVRLKVNL*ISTLRAFKLENIEM
Trigger: CATTTCTATATTCTCCAGTTTGAAAGCTCTTAGAGTGGAGATGCAAAGGTTTACCTTCAGCCTCACCTCCACCACTGATGAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp CTTCACATTCTAGGTGTGCCTATAACCCTTCCCCATATCCTGAGCTaGTTGCTTAAACCTGATCTGGCAACTGCAGAAATGTTACAAGAA +
Preference number: 1 (lower is better)
Translates to: LHILGVPITLPHILS*LLKPDLATAEMLQE
Trigger: TTCTTGTAACATTTCTGCAGTTGCCAGATCAGGTTTAAGCAACCAGCTCAGGATATGGGGAAGGGTTATAGGCACACCTAGAATGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CCA 90 bp CTGACCGAGAATGACCTGCTACTTTCCCACTCATTCCAGTCTTCATaGCAACCACATGAGATAAAGACAAAAGGAGAAATTGGTCCTTAC +
Preference number: 1 (lower is better)
Translates to: LTENDLLLSHSFQSS*QPHEIKTKGEIGPY
Trigger: GTAAGGACCAATTTCTCCTTTTGTCTTTATCTCATGTGGTTGCCATGAAGACTGGAATGAGTGGGAAAGTAGCAGGTCATTCTCGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp TTCCTTGTCCTGAAGCGAAGTATCATCAATATTATTCTGATTGGCTaGCAGGATAACGCACATGTCACAGAGGTTGATGTTGACAGCCCT +
Preference number: 1 (lower is better)
Translates to: FLVLKRSIINIILIG*QDNAHVTEVDVDSP
Trigger: AGGGCTGTCAACATCAACCTCTGTGACATGTGCGTTATCCTGTCAGCCAATCAGAATAATATTGATGATACTTCGCTTCAGGACAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp CATGAAATCATTGATCCATCCATGTTCCTGAATGAGCTGGGATGTTaGTCCTCAGCATACTTAACTCTGAAACACCGTCTAGTCTACAAC +
Preference number: 1 (lower is better)
Translates to: HEIIDPSMFLNELGC*SSAYLTLKHRLVYN
Trigger: GTTGTAGACTAGACGGTGTTTCAGAGTTAAGTATGCTGAGGAGCAACATCCCAGCTCATTCAGGAACATGGATGGATCAATGATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp GGTGGACCCATGGGTGTTTTAATAATTGAGTACTGCATGACAAGGTaGAAATGTAGGAAGAAGGTAGGTGTTCTTCATGGTGAGCTGTTA +
Preference number: 1 (lower is better)
Translates to: GGPMGVLIIEYCMTR*KCRKKVGVLHGELL
Trigger: TAACAGCTCACCATGAAGAACACCTACCTTCTTCCTACATTTCCACCTTGTCATGCAGTACTCAATTATTAAAACACCCATGGGTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp GTGCACACCAGTGAAACATTCCAGTGGAGTCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCTGATCATTGCCAGGAATTAACAAGG +
Preference number: 1 (lower is better)
Translates to: VHTSETFQWSRTFSH*SPCCQSDHCQELTR
Trigger: CCTTGTTAATTCCTGGCAATGATCAGATTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACTGGTGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 90 bp CAAATGCAAAATCATGATGTTAAAGGAAGTCTTAGCTTTCAGGAATaGTGTCAAGATTCTGGCAGTGGATTCTCCCCACCAACACATCTG +
Preference number: 1 (lower is better)
Translates to: QMQNHDVKGSLSFQE*CQDSGSGFSPPTHL
Trigger: CAGATGTGTTGGTGGGGAGAATCCACTGCCAGAATCTTGACAGCATTCCTGAAAGCTAAGACTTCCTTTAACATCATGATTTTGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp AGATTCTGGCAGTGGATTCTCCCCACCAACACATCTGAGTTCTGTTaGAAACCAAGAAATGTTTATAAGCCCGAATATAAAACTGCTGAC +
Preference number: 1 (lower is better)
Translates to: RFWQWILPTNTSEFC*KPRNVYKPEYKTAD
Trigger: GTCAGCAGTTTTATATTCGGGCTTATAAACATTTCTTGGTTTCCAACAGAACTCAGATGTGTTGGTGGGGAGAATCCACTGCCAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp TCACTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAATATTCGGCTCTCTCTGTTGGCAGAC +
Preference number: 1 (lower is better)
Translates to: SLAMKNPKVPSWILR*FPGLINIRLSLLAD
Trigger: GTCTGCCAACAGAGAGAGCCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR TCA 90 bp GGAACGTTTTTAATTAGGATTTCCAGGCAGATCTGGGTTTATGTTTaGAATGTTGCAGTTCTGGTCAAATGTGTACACAGCGGAAGGAGA +
Preference number: 1 (lower is better)
Translates to: GTFLIRISRQIWVYV*NVAVLVKCVHSGRR
Trigger: TCTCCTTCCGCTGTGTACACATTTGACCAGAACTGCAACATTTCAAACATAAACCCAGATCTGCCTGGAAATCCTAATTAAAAACGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp AGAGCCTACTATGGTTCAGGAAGGAAAGAAGAGCGTGGATTGACATaGATGTACTTAGGTAACCCCAAATGCAAAATCATGATGTTAAAG +
Preference number: 1 (lower is better)
Translates to: RAYYGSGRKEERGLT*MYLGNPKCKIMMLK
Trigger: CTTTAACATCATGATTTTGCATTTGGGGTTACCTAAGTACATTCATGTCAATCCACGCTCTTCTTTCCTTCCTGAACCATAGTAGGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp ACTCACGATCCTTGTGCCTCCAGTCAAAAACTAAGTATTTCCTATTaGAAAGTCTCCACAGCCCAGCCTATTATTTTTCCCATTCATGAT +
Preference number: 1 (lower is better)
Translates to: THDPCASSQKLSISY*KVSTAQPIIFPIHD
Trigger: ATCATGAATGGGAAAAATAATAGGCTGGGCTGTGGAGACTTTTCAATAGGAAATACTTAGTTTTTGACTGGAGGCACAAGGATCGTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp AAACATCTTCTCAGCTGTTTGCATCTTCAGTCCAGAATACCTTCATaGTTGAAATGGATCTCTCCCCTCCTTTTTATAGGGATGAAAGCA +
Preference number: 1 (lower is better)
Translates to: KHLLSCLHLQSRIPS*LKWISPLLFIGMKA
Trigger: TGCTTTCATCCCTATAAAAAGGAGGGGAGAGATCCATTTCAATCATGAAGGTATTCTGGACTGAAGATGCAAACAGCTGAGAAGATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp AAACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATaGCAGAGTTGGGTAGGTCATTTCAGAGCACCAGCATTTATTCTC +
Preference number: 1 (lower is better)
Translates to: KPFLQDKRVITGCYR*QSWVGHFRAPAFIL
Trigger: GAGAATAAATGCTGGTGCTCTGAAATGACCTACCCAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 90 bp TTTAATCTGTGTGGTGGACCCATGGGTGTTTTAATAATTGAGTACTaGATGACAAGGTGGAAATGTAGGAAGAAGGTAGGTGTTCTTCAT +
Preference number: 1 (lower is better)
Translates to: FNLCGGPMGVLIIEY*MTRWKCRKKVGVLH
Trigger: ATGAAGAACACCTACCTTCTTCCTACATTTCCACCTTGTCATGCAGTACTCAATTATTAAAACACCCATGGGTCCACCACACAGATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp ACTTCTTTGGCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCAGGGTTAATTAATATTCGGCTCTCT +
Preference number: 1 (lower is better)
Translates to: TSLASLAMKNPKVPS*ILRWFPGLINIRLS
Trigger: AGAGAGCCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCAAAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CCA 90 bp TGTACTTTTCTACCTCTTTCTATCATTCTTTCCACGAGGTCCTCCTaGACGATGATATTGACAACTCATAATGGCACTTTTGAATGTAAG +
Preference number: 1 (lower is better)
Translates to: CTFLPLSIILSTRSS*TMILTTHNGTFECK
Trigger: CTTACATTCAAAAGTGCCATTATGAGTTGTCAATATCATCGTCCAGGAGGACCTCGTGGAAAGAATGATAGAAAGAGGTAGAAAAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 90 bp ATGGTACTTACTTGCTATGTAGCCCATCCAATTAAAAGTCTTTATTaGATGCATGTTCTACATAACATGTCTCCTGTTGCCAAGAAGGGA +
Preference number: 1 (lower is better)
Translates to: MVLTCYVAHPIKSLY*MHVLHNMSPVAKKG
Trigger: TCCCTTCTTGGCAACAGGAGACATGTTATGTAGAACATGCATCCAATAAAGACTTTTAATTGGATGGGCTACATAGCAAGTAAGTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 90 bp GAAACTACAAAGATAATGACTTTCAACTGGGAAGATAATGAAGTTTaGTTTGTTAAGAGCTGGTGTCAATGCAGATCAAAACATACACCC +
Preference number: 1 (lower is better)
Translates to: ETTKIMTFNWEDNEV*FVKSWCQCRSKHTP
Trigger: GGGTGTATGTTTTGATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGAAAGTCATTATCTTTGTAGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 2 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGG +
Preference number: 2 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSSADLL*TGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: AGLPGLGPVRPICCGRDGDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...TCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 90 bp TCTGTTTGTCGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTaGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGG +
Preference number: 2 (lower is better)
Translates to: SVCRGTPWTWAGSAD*LWTGWSGRRSSSYW
Trigger: CCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGACAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 2 (lower is better)
Translates to: AGLPGLGPVRPICCGRDGQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...TCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp TGTTTGTCGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 2 (lower is better)
Translates to: CLSRDSLDLGRFGRFAVDEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...GTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACCTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGA +
Preference number: 2 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDLTGRL*GVGGMR
Trigger: TCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAG...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 2 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp AGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: RANWATRQRSLLANVCGVQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...CACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGG +
Preference number: 2 (lower is better)
Translates to: GPLGNGPCWPMSAECCSLALWSN*IRQKIR
Trigger: CCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC...GAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 2 (lower is better)
Translates to: VVMDGWRNIPCTGLLSGDRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...ATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp CTCATCAGCTTCGGGGAGGTGTTGGGCGAGTTCCTCATGCCCCCATTACGTTGTTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 2 (lower is better)
Translates to: LISFGEVLGEFLMPPLRCWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...ACAACGTAATGGGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCTGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp CACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 2 (lower is better)
Translates to: HSATVPVGQCLRSAVASSGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...CGAGGAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 2 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp CCAGTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCCATTCCAGGAGGTGTGAATCCTTGG +
Preference number: 2 (lower is better)
Translates to: PVVMDGWRNIPCTGL*SGDDLSIPGGVNPW
Trigger: CCAAGGATTCACACCTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp ACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 2 (lower is better)
Translates to: TYLFVHWLGVLRWASLSRLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...CCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp TCTAACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCCCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 2 (lower is better)
Translates to: SNRANWATRQRSLLANVCPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...GCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 2 (lower is better)
Translates to: GPLGNGPCWPMSAECCSLEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...GAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATGAGACAAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 2 (lower is better)
Translates to: GRRSSSYWTTVRSGRNETRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...TGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 2 (lower is better)
Translates to: LLWTGWSGRRSSSYWTTVVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...CACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: SADLLWTGWSGRRSSSYWDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...CCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp AAAGGCAACTTGCCCGGCTTAGCGAGTTCCGTGATGATGGGAATGTaGACCCCAGTTGTGATGGACGGCTGGCGTAACATCCCGTGCACT +
Preference number: 2 (lower is better)
Translates to: KGNLPGLASSVMMGM*TPVVMDGWRNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCCCATCATCACGGAACTCGCTAAGCCGGGCAAGTTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR-3UTR CCA 90 bp CGTTGTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: RCGQTASGRRSGLLVRAQASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...TTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATGATCTGTCCATTCCAGGAGGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: VTSRALGCCRVMICPFQEVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...CTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TCTAACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 2 (lower is better)
Translates to: SNRANWATRQRSLLANVCGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...GCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp CCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGACTACGACATGGCCACTCGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 2 (lower is better)
Translates to: PIRAELTSPKMQTTTWPLVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...GAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp ACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTAAATTCCAAAACAGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 2 (lower is better)
Translates to: TLAGGAEVGISQPVNSKTVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...TGTTTTGGAATTTACCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp TGTAGCCTCCTCGAAGTGCATTCTCCTCAGCTATTAGAGCCTCGAGCTCTGGTGGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 2 (lower is better)
Translates to: CSLLEVHSPQLLEPRALVEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...CACCAGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGAGGAGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp ATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 2 (lower is better)
Translates to: ITRFRRPIRAELTSPKMQMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...CTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 2 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp CCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGACTACGACATGGCCACTCACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 2 (lower is better)
Translates to: PIRAELTSPKMQTTTWPLTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...GAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 2 (lower is better)
Translates to: AGLPGLGPVRPICCGRDGMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...TCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 2 (lower is better)
Translates to: GITRFRRPIRAELTSPKMLSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GCAAATGCTGTCCCACAAGCAAAGGGCTGTGTGAGGTACAGCTCTGTGTCAGGGCACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 2 (lower is better)
Translates to: ANAVPQAKGCVRYSSVSGHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...CCCTGACACAGAGCTGTACCTCACACAGCCCTTTGCTTGTGGGACAGCATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATGAGACAATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 2 (lower is better)
Translates to: GRRSSSYWTTVRSGRNETMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...TGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATGAGACATCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GRRSSSYWTTVRSGRNETSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...TGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp CAAGTCACTGCAGGACAACGCCTACAAGGTGGAAGCACAGCTATATaGGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: QVTAGQRLQGGSTAI*ALQGVDRGGSSFCL
Trigger: TAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTGCAGTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 90 bp GCCCGACTTAATGGTGTACCAGGCAATATGGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCCCTCTTGAGGTACTCAATGGAGCCC +
Preference number: 2 (lower is better)
Translates to: ARLNGVPGNMDTFGK*CSVSHSLLRYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACCATTAAGTCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp ACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTAAATTCCAAAACACTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 2 (lower is better)
Translates to: TLAGGAEVGISQPVNSKTLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...TGTTTTGGAATTTACCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 2 (lower is better)
Translates to: GPLGNGPCWPMSAECCSLMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...GAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: VVKLHQAEDQVCWYELKLDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...GAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GCAGACTACGACATGGCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAATCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: ADYDMATQDSHGSFTSSQSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...TTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAACAGAGTCTGCTCTTaGGTGCCTCTGGCTCACGAC +
Preference number: 2 (lower is better)
Translates to: SREKNIADSPTVHMTCMGNRVCS*VPLAHD
Trigger: GTCGTGAGCCAGAGGCACCCAAGAGCAGACTCTGTT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR TCA 90 bp CGTTGTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAATTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 2 (lower is better)
Translates to: RCGQTASGRRSGLLVRAQLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...TTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp CGTTGTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAATTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: RCGQTASGRRSGLLVRAQFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...TTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp CACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGCTATTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: HHNNHHPLSLQRDHLTGLFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...TAGCCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 2 (lower is better)
Translates to: VVMDGWRNIPCTGLLSGDMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...ATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GATCACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: DHHNNHHPLSLQRDHLTGKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...CCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATGATCTGTCCATTCCAGGAGTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 2 (lower is better)
Translates to: VTSRALGCCRVMICPFQELGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...CTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp TTGGTGATGACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 2 (lower is better)
Translates to: LVMTYLFVHWLGVLRWASLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...AGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATCACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp CTCCAGTTCCTGTCTGGTTACATAATTCATCATAGCCACAGTCACCATGCCAGCTGGATGGCTACCTCCTaGATCCCTAGGGCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: LQFLSGYIIHHSHSHHASWMATS*IPRAGS
Trigger: ACTTCCTGCCCTAGGGATCCAGGAGGTAGCCATCCA...GCTGGCATGGTGACTGTGGCTATGATGAATTATGTAACCAGACAGGAACTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATCCAAAAACTGAACATTaGTATCATTCACCAACTCCG +
Preference number: 2 (lower is better)
Translates to: VVMDGWRNIPCTGLLSGDPKTEH*YHSPTP
Trigger: CGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGG...ATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR-3UTR CCA 90 bp GATGATCTGTCCATTCCAGGAGGTGTGAATCCTTGGGAATTAGCCTGCAAGACCGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 2 (lower is better)
Translates to: DDLSIPGGVNPWELACKTDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCTGGAATGGACAGATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp CGTTGTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RCGQTASGRRSGLLVRAQRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...TTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp ACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTAAATTCCAAAACAATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 2 (lower is better)
Translates to: TLAGGAEVGISQPVNSKTIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...TGTTTTGGAATTTACCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GATGATCTGTCCATTCCAGGAGGTGTGAATCCTTGGGAATTAGCCTGCAAGACCAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: DDLSIPGGVNPWELACKTRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCTGGAATGGACAGATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGAAAGAAGAGAAATGTaGATCAAGGAATCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPERREM*IKESGH
Trigger: GTGGCCAGATTCCTTGATGCACATTTCTCTTCTTTC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAAGAGCTGGTGTCAATaGAGATCAAAACATACACCC +
Preference number: 2 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPKSWCQ*RSKHTP
Trigger: GGGTGTATGTTTTGATCTGCATTGACACCAGCTCTT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR GCA 90 bp TGTAGCCTCCTCGAAGTGCATTCTCCTCAGCTATTAGAGCCTCGAGCTCTGGTGCCACAGACTACAATGTaGTTTCTGCCTCCATGTTTG +
Preference number: 2 (lower is better)
Translates to: CSLLEVHSPQLLEPRALVPQTTM*FLPPCL
Trigger: CAAACATGGAGGCAGAAAGCACATTGTAGTCTGTGG...CACCAGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGAGGAGGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCGCAAGTGCTAGGTGGTaGGCAGGGACCCCTCTAGGG +
Preference number: 2 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTASARW*AGTPLG
Trigger: CCCTAGAGGGGTCCCTGCCCACCACCTAGCACTTGC...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
3UTR-3UTR CCA 90 bp TGGGAATTAGCCTGCAAGACCCCGATGCTGTCATCAAACTGCATAGATTTGATGGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: WELACKTPMLSSNCIDLMVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...CATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 90 bp ATGATGTTGGAGGCATCTTCTGCATCCGGGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCATCTGCTGACTCTATCTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: MMLEASSASGSAQYL*ARIRHASADSILTL
Trigger: CAGAGTCAAGATAGAGTCAGCAGATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGACCCGGATGCAGAAGATGCCTCCAACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp GGGCTGTGTGAGGTACAGCTCTGTGTCAGGGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATTGGTATCATTCACGAGTTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: GLCEVQLCVRVIVIV*VQKLNIGIIHEFRD
Trigger: ATCACGGAACTCGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACACAGAGCTGTACCTCACACAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp CTCATCAGCTTCGGGGAGGTGTTGGGCGAGTTCCTCATGCCCCCATTACGTTGTTCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 2 (lower is better)
Translates to: LISFGEVLGEFLMPPLRCSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...ACAACGTAATGGGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCTGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GAATTAACAAGGGGTCATGCCTCATCAGCTTCGGGGAGGTGTTGGGCGAGTTCCATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 2 (lower is better)
Translates to: ELTRGHASSASGRCWASSMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...GGAACTCGCCCAACACCTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGTACACTGGGCATGCATaGAACAGCAGAGCTCAGACA +
Preference number: 2 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSYTGHA*NSRAQT
Trigger: TGTCTGAGCTCTGCTGTTGCATGCATGCCCAGTGTA...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR GCA 90 bp GTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 2 (lower is better)
Translates to: VRPICCGRDGVDGGALLTMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...AGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGTGCATCAAGGAATCTaGCCACTAACTCATTTTGAT +
Preference number: 2 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPVHQGI*PLTHFD
Trigger: ATCAAAATGAGTTAGTGGCCAGATTCCTTGATGCAC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCATGCTTAAACCTGATCTaGCAACTGCAGAAATGTTAC +
Preference number: 2 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPCLNLI*QLQKCY
Trigger: GTAACATTTCTGCAGTTGCCAGATCAGGTTTAAGCA...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp TGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 2 (lower is better)
Translates to: WTGWSGRRSSSYWTTVRSRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...ACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp ACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 2 (lower is better)
Translates to: TASGRRSGLLVRAQTRRELSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...CTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GTGATGACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCCTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 2 (lower is better)
Translates to: VMTYLFVHWLGVLRWASLLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...GAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATaGGTAATTGGAGTCCTTAGTGGACATGTTTCCATAGTGATCACA +
Preference number: 2 (lower is better)
Translates to: GSAGSGQRWKLILPT*VIGVLSGHVSIVIT
Trigger: TGTGATCACTATGGAAACATGTCCACTAAGGACTCCAATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 90 bp GGGCTGTGTGAGGTACAGCTCTGTGTCAGGGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATTGGTATCATTCACCAACTCCGTTAT +
Preference number: 2 (lower is better)
Translates to: GLCEVQLCVRVIVIV*VQKLNIGIIHQLRY
Trigger: ATAACGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACACAGAGCTGTACCTCACACAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR-3UTR GCA 90 bp AAAGGCAACTTGCCCGGCTTAGCGAGTTCCGTGATGATGGGAATGTTGACCCCATGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: KGNLPGLASSVMMGMLTPCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...TGGGGTCAACATTCCCATCATCACGGAACTCGCTAAGCCGGGCAAGTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR-3UTR CCA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTGGCCTAAAGAGTTCATaGAAGAGATGTCATGGGTCT +
Preference number: 2 (lower is better)
Translates to: GSAGSGQRWKLILPTLVIGLKSS*KRCHGS
Trigger: AGACCCATGACATCTCTTCCATGAACTCTTTAGGCC...AATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp CAAACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGTAGGCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 2 (lower is better)
Translates to: QTASGRRSGLLVRAQTRRQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...CCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp AATATGGACACTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCCACAAACACAATGTGTTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: NMDTFGKLCSVSHSL*RYSMEPTNTMCLSS
Trigger: TGAGCTCAAACACATTGTGTTTGTGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp AGTCAAGATGACTTTCTCAATCTCCTTGGGTGCACACCAGTGAAACATTCCAGTATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: SQDDFLNLLGCTPVKHSSINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...ACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp TGTAGCCTCCTCGAAGTGCATTCTCCTCAGCTATTAGAGCCTCGAGCTCTGGTGTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 2 (lower is better)
Translates to: CSLLEVHSPQLLEPRALVSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...CACCAGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGAGGAGGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 90 bp CACATTCTAGGTGTGCCTATAACCCTTCCCCATATCCTGAGCTGGTaGCTTAAACCTGATCTGGCAACTGCAGAAATGTTACAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: HILGVPITLPHILSW*LKPDLATAEMLQEA
Trigger: AGCTTCTTGTAACATTTCTGCAGTTGCCAGATCAGGTTTAAGCAACCAGCTCAGGATATGGGGAAGGGTTATAGGCACACCTAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CAA 90 bp AGCTATATTGGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTaGCCTACATTGGTAATTGGAGTCCTTAGTGGACATGTTTCCATA +
Preference number: 2 (lower is better)
Translates to: SYIGSAGSGQRWKLI*PTLVIGVLSGHVSI
Trigger: TATGGAAACATGTCCACTAAGGACTCCAATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp GACACTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTTGAGGTACTCAATGTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 2 (lower is better)
Translates to: DTFGKLCSVSHSLLRYSMSMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...CATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp GATGACTTTCTCAATCTCCTTGGGTGCACACCAGTGAAACATTCCAGTGGAGTCATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 2 (lower is better)
Translates to: DDFLNLLGCTPVKHSSGVIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...GACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR GCA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGAAGAGCTGGTGTCAATaGAGATCAAAACATACACCC +
Preference number: 2 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSKSWCQ*RSKHTP
Trigger: GGGTGTATGTTTTGATCTGCATTGACACCAGCTCTT...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR GCA 90 bp ACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 2 (lower is better)
Translates to: TASGRRSGLLVRAQTRREMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...CTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATaGGTTGATCTGGTTAGCCATGTGGGTACTCATGGGCTTGATTTG +
Preference number: 2 (lower is better)
Translates to: FNFSDWRDQAACGFI*VDLVSHVGTHGLDL
Trigger: CAAATCAAGCCCATGAGTACCCACATGGCTAACCAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
3UTR-3UTR TCA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTACACTGGAGGAAAACTaGAACTACAAAGATAATGAC +
Preference number: 2 (lower is better)
Translates to: GSAGSGQRWKLILPTLVITLEEN*NYKDND
Trigger: GTCATTATCTTTGTAGTTTCAGTTTTCCTCCAGTGT...AATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTACACTGGAGGAAAACTaGAACTACAAAGATAATGAC +
Preference number: 2 (lower is better)
Translates to: SREKNIADSPTVHMTCMGTLEEN*NYKDND
Trigger: GTCATTATCTTTGTAGTTTCAGTTTTCCTCCAGTGT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR TCA 90 bp GACTTTCTAAATCAATGCTCTGATTTCAATGTGGCTCTTCAACCATCCACTTCCCCCCACCAACACATCTaGGTTCTGTTGGAAACCAAG +
Preference number: 2 (lower is better)
Translates to: DFLNQCSDFNVALQPSTSPHQHI*VLLETK
Trigger: CTTGGTTTCCAACAGAACTCAGATGTGTTGGTGGGG...GGAAGTGGATGGTTGAAGAGCCACATTGAAATCAGAGCATTGATTTAGAAAGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GACACTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTTGAGGTACTCAATGCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 2 (lower is better)
Translates to: DTFGKLCSVSHSLLRYSMRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...CATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 90 bp TGGTTCCCAGGGTTAATTAATATTCGGCTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATCAGGAGCTTAAGCTTCACAAAACAC +
Preference number: 2 (lower is better)
Translates to: WFPGLINIRLSLLAD*YSMAIIRSLSFTKH
Trigger: GTGTTTTGTGAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAATATTAATTAACCCTGGGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGGGTACTCATGGGCTTaGTTTGAATGTTTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLGYSWA*FECFWD
Trigger: ATCCCAGAAACATTCAAATCAAGCCCATGAGTACCC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
3UTR-3UTR TCA 90 bp CTCCAGTTCCTGTCTGGTTACATAATTCATCATAGCCACAGTCACCATGCCAGCACAAATGGAATGAAATaGGAAGTAAGGGTGAGTGTA +
Preference number: 2 (lower is better)
Translates to: LQFLSGYIIHHSHSHHASTNGMK*EVRVSV
Trigger: TACACTCACCCTTACTTCTCATTTCATTCCATTTGT...GCTGGCATGGTGACTGTGGCTATGATGAATTATGTAACCAGACAGGAACTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR GCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGAGAACAACAGAGTCTaGTCTTGGGTGCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSENNRV*SWVPLA
Trigger: AGCCAGAGGCACCCAAGAGCAGACTCTGTTGTTCTC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp GGAGAATATAGAAATGAACCTGACTGTTCTTTGTCCAGAGCAGAGAGTGGATGCATAGTTCTGGTCTCCTaGGAGTCAACATTCATCTTC +
Preference number: 2 (lower is better)
Translates to: GEYRNEPDCSLSRAESGCIVLVS*ESTFIF
Trigger: GAAGATGAATGTTGACTCCCAGGAGACCAGAACTAT...GCATCCACTCTCTGCTCTGGACAAAGAACAGTCAGGTTCATTTCTATATTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp CATGTGTTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTGCTCATTCCAGTCTTCATaGCAACCACATGAGATAAAG +
Preference number: 2 (lower is better)
Translates to: HVLCVYISIEDSKQQDRCSFQSS*QPHEIK
Trigger: CTTTATCTCATGTGGTTGCCATGAAGACTGGAATGA...GCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGATGACTTTCTCAATAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 2 (lower is better)
Translates to: ATQDSHGSFTSSQDDFLNSETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...ATTGAGAAAGTCATCTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp GGCAAGATCATGTGGATTGAGGACAGAGCCCTGATAAAACTCCACCTGAGTGAAAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 2 (lower is better)
Translates to: GKIMWIEDRALIKLHLSESETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...TTCACTCAGGTGGAGTTTTATCAGGGCTCTGTCCTCAATCCACATGATCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGGGTACTCATGGGCTTaGTTTGAATGTTTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SPQRKREKEEKCASRNLAGYSWA*FECFWD
Trigger: ATCCCAGAAACATTCAAATCAAGCCCATGAGTACCC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR-3UTR TCA 90 bp GTCCTTACAGTCTGCCTCATTACTTCACTATTTCAGATCCCCTGTATCTCAACCTTCCATGGTTCTCTCTaGCTTTCTAAATCAATGCTC +
Preference number: 2 (lower is better)
Translates to: VLTVCLITSLFQIPCISTFHGSL*LSKSML
Trigger: GAGCATTGATTTAGAAAGTCAGAGAGAACCATGGAA...GGTTGAGATACAGGGGATCTGAAATAGTGAAGTAATGAGGCAGACTGTAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp TGGGAATTAGCCTGCAAGACCCCGATGCTGTCATCAAACTGCATAGATTTGATGTCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 2 (lower is better)
Translates to: WELACKTPMLSSNCIDLMSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...CATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CCA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGGAGGTGACTGTACACTaGGCATGCATGCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: PILKRYSVLIISAWFAPLEVTVH*ACMQQQ
Trigger: CTGCTGTTGCATGCATGCCCAGTGTACAGTCACCTC...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGCTATTAGAGCCATTGTaGTTGAGAAACAAGTTTAGA +
Preference number: 2 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSLLEPL*LRNKFR
Trigger: TCTAAACTTGTTTCTCAACCACAATGGCTCTAATAG...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGACCATTGGCCTAATGTaGATGGAAAGACTATTTAAT +
Preference number: 2 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSTIGLM*MERLFN
Trigger: ATTAAATAGTCTTTCCATCCACATTAGGCCAATGGT...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTAGTCCAGAGCAGAGAGTaGATGCTGTGTTTAGCTCAG +
Preference number: 2 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLVQSRE*MLCLAQ
Trigger: CTGAGCTAAACACAGCATCCACTCTCTGCTCTGGAC...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 90 bp CCTCTTTCTATCATTCTTTCCACGAGGTCCTCCTGGACGATGATATaGACAACTCATAATGGCACTTTTGAATGTAAGCAGCAAAGACAT +
Preference number: 2 (lower is better)
Translates to: PLSIILSTRSSWTMI*TTHNGTFECKQQRH
Trigger: ATGTCTTTGCTGCTTACATTCAAAAGTGCCATTATGAGTTGTCAATATCATCGTCCAGGAGGACCTCGTGGAAAGAATGATAGAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 90 bp TTGAGTGCAATCACAGGATCTCAAGTTGCTGAGAGATGGTTCAACTaGAGAGCCTATGTTTCTGTGATGCTTTCCAGAAAGAATAGAATG +
Preference number: 2 (lower is better)
Translates to: LSAITGSQVAERWFN*RAYVSVMLSRKNRM
Trigger: CATTCTATTCTTTCTGGAAAGCATCACAGAAACATAGGCTCTCAAGTTGAACCATCTCTCAGCAACTTGAGATCCTGTGATTGCACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 90 bp TTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTaGGGTAGGTCATTTCAGAGCACCAGCATTTATTCTCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: FTRQESYHWLLQMTE*GRSFQSTSIYSLLQ
Trigger: CTGGAGAAGAGAATAAATGCTGGTGCTCTGAAATGACCTACCCAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAATCTGGTTAGCCATGTaGGTACTCATGGGCTTGATT +
Preference number: 2 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALIWLAM*VLMGLI
Trigger: AATCAAGCCCATGAGTACCCACATGGCTAACCAGAT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTTCAACTTCTCTGATTaGAGGGATCAGGCTGCTTGT +
Preference number: 2 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQFNFSD*RDQAAC
Trigger: ACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR-3UTR CCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTATCAAGATTCTGGCAGTaGATTCTCCCCACCAACACA +
Preference number: 2 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLSRFWQ*ILPTNT
Trigger: TGTGTTGGTGGGGAGAATCCACTGCCAGAATCTTGA...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp ACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTTGCACAGAAGTTTCTCATaGGATAAACAGACCAGGGGA +
Preference number: 2 (lower is better)
Translates to: TLFTRQESYHWLLQMTELHRSFS*DKQTRG
Trigger: TCCCCTGGTCTGTTTATCCCATGAGAAACTTCTGTG...CAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTACAAATTGGGGTGGTaGCCATCATTCTCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: HSPQRKREKEEKCASRNLYKLGW*PSFSSK
Trigger: CTTTGAGGAGAATGATGGTCACCACCCCAATTTGTA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
3UTR-3UTR TCA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGAGAGTAACCACAGTCTaGCAAGTCACTGCAGGACAA +
Preference number: 2 (lower is better)
Translates to: PILKRYSVLIISAWFAPLRVTTV*QVTAGQ
Trigger: TTGTCCTGCAGTGACTTGTCAGACTGTGGTTACTCT...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAACAGTCCACATGACTTaGATGGGTGCCTTAGAAGTA +
Preference number: 2 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKTVHMT*MGALEV
Trigger: TACTTCTAAGGCACCCATGCAAGTCATGTGGACTGT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR GCA 90 bp GCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTGGTTCTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: ASLAMKNPKVPSWILRWFCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...GAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGATTTTGCATTGCTGTaGTATATGGGAAGATATCTG +
Preference number: 2 (lower is better)
Translates to: SPQRKREKEEKCASRNLADFALL*YMGRYL
Trigger: CAGATATCTTCCCATATATCACAGCAATGCAAAATC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
3UTR-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGGTGCCTTAGAAGTATaGAACAGGGAGCATAAAGAA +
Preference number: 2 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKGALEV*NREHKE
Trigger: TTCTTTATGCTCCCTGTTTCATACTTCTAAGGCACC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR GCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATGAAAGAAGAGAAATGTaGATCAAGGAATCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: STGKIMKFDLLRAGVNADERREM*IKESGH
Trigger: GTGGCCAGATTCCTTGATGCACATTTCTCTTCTTTC...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCCCCTTCTTTACAAATTaGGGTGGTGACCATCATTCT +
Preference number: 2 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSPFFTN*GGDHHS
Trigger: AGAATGATGGTCACCACCCCAATTTGTAAAGAAGGG...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTATATTGGTTGATCTaGTTAGCCATGTGGGTACTC +
Preference number: 2 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRLYWLI*LAMWVL
Trigger: GAGTACCCACATGGCTAACCAGATCAACCAATATAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCTTGTGGATTTATATTaGTTGATCTGGTTAGCCATG +
Preference number: 2 (lower is better)
Translates to: SPQRKREKEEKCASRNLALVDLY*LIWLAM
Trigger: CATGGCTAACCAGATCAACCAATATAAATCCACAAG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR-3UTR CCA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGAAAGAGGACCACCATTaGCCTAATGTGGATGGAAAG +
Preference number: 2 (lower is better)
Translates to: PILKRYSVLIISAWFAPLKEDHH*PNVDGK
Trigger: CTTTCCATCCACATTAGGCCAATGGTGGTCCTCTTT...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTACAGACCCTTCTAATGTaGAATATTCCAAAGAGGACC +
Preference number: 2 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLQTLLM*NIPKRT
Trigger: GGTCCTCTTTGGAATATTCCACATTAGAAGGGTCTG...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR GCA 90 bp ACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTTGTTAACTGCTTCAAACTaGTTGTTTCTTATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TLFTRQESYHWLLQMTELLTASN*LFLISC
Trigger: GCAGGAGATAAGAAACAAGCAGTTTGAAGCAGTTAA...CAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACTTTTCCAAAATACATaGAAGCAGTATTCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQLFQNT*KQYSRQ
Trigger: TTGCCTTGAATACTGCTTCCATGTATTTTGGAAAAG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCTTTTCCAAAATACATaGAAGCAGTATTCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: SPQRKREKEEKCASRNLALFQNT*KQYSRQ
Trigger: TTGCCTTGAATACTGCTTCCATGTATTTTGGAAAAG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
3UTR CAA 90 bp TGTCTTCTATTTGCTATAGCAGGGGAGAGTAATTTCAAAATACAGTaGCTTAAACGAAGACAAACTGCATTCATGAGAAAGATGGTGATG +
Preference number: 2 (lower is better)
Translates to: CLLFAIAGESNFKIQ*LKRRQTAFMRKMVM
Trigger: CATCACCATCTTTCTCATGAATGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTATAGCAAATAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATGATTTTGCATTGCTGTaGTATATGGGAAGATATCTG +
Preference number: 2 (lower is better)
Translates to: STGKIMKFDLLRAGVNADDFALL*YMGRYL
Trigger: CAGATATCTTCCCATATATCACAGCAATGCAAAATC...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGATTTTGCATTGCTGTaGTATATGGGAAGATATCTG +
Preference number: 2 (lower is better)
Translates to: HSPQRKREKEEKCASRNLDFALL*YMGRYL
Trigger: CAGATATCTTCCCATATATCACAGCAATGCAAAATC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
3UTR-3UTR TCA 90 bp TTTCTCTATTTTAAGCCCTCCTTTCTGTTTCCCACTCTCCCAATACTAAAAAGAGATTTTGCATTGCTGTaGTATATGGGAAGATATCTG +
Preference number: 2 (lower is better)
Translates to: FLYFKPSFLFPTLPILKRDFALL*YMGRYL
Trigger: CAGATATCTTCCCATATATCACAGCAATGCAAAATC...TCTTTTTAGTATTGGGAGAGTGGGAAACAGAAAGGAGGGCTTAAAATAGAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTATCTGAGAATCATGCTTaGCCTCTTCCTCATTTATTA +
Preference number: 2 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLSENHA*PLPHLL
Trigger: TAATAAATGAGGAAGAGGTCAAGCATGATTCTCAGA...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR TCA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGGAGCCTATGTTTCTGTaGTGCTTTCCAGAAAGAATA +
Preference number: 2 (lower is better)
Translates to: PILKRYSVLIISAWFAPLEPMFL*CFPERI
Trigger: TATTCTTTCTGGAAAGCATCACAGAAACATAGGCTC...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR GCA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGATCTTCTCAGCTGTTTaGATCTTCAGTCCAGAATAC +
Preference number: 2 (lower is better)
Translates to: PILKRYSVLIISAWFAPLIFSAV*IFSPEY
Trigger: GTATTCTGGACTGAAGATGCAAACAGCTGAGAAGAT...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCTTTTCCAAAATACATaGAAGCAGTATTCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQLFQNT*KQYSRQ
Trigger: TTGCCTTGAATACTGCTTCCATGTATTTTGGAAAAG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
3UTR-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCCTTGTGGATTTATATTaGTTGATCTGGTTAGCCATG +
Preference number: 2 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSLVDLY*LIWLAM
Trigger: CATGGCTAACCAGATCAACCAATATAAATCCACAAG...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTAGACTTACTTTCCTTTTaGTTGTTTACTGGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLDLLSF*LFTGFW
Trigger: CCAAAAACCAGTAAACAACCAAAAGGAAAGTAAGTC...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTGGACGGAGGAGCTCTT +
Preference number: 3 (lower is better)
Translates to: AGLPGLGPVRPI*CGRDGVDGGAL
Trigger: AAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 3 (lower is better)
Translates to: GPLGNGPCWPMSAECCSLQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...GAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 3 (lower is better)
Translates to: VVMDGWRNIPCTGLLSGDSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...ATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp ACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTaGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGAA +
Preference number: 3 (lower is better)
Translates to: TGLTGPLGNGPC*PMSAECCSLLE
Trigger: TTCGAGGAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp GGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTACTGGACGACTGTGAG +
Preference number: 3 (lower is better)
Translates to: GRFGRFAVDGME*TEELFLLDDCE
Trigger: CTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp ACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGGAGGAGCTCTTCTTAC +
Preference number: 3 (lower is better)
Translates to: TPWTWAGSADLL*TGWSGRRSSSY
Trigger: GTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp AGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 3 (lower is better)
Translates to: RANWATRQRSLLANVCGVVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...CACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: VVMDGWRNIPCTGLLSGDPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...ATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp GGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGACAGACTGGCCCGGGA +
Preference number: 3 (lower is better)
Translates to: GVDGGALLTGRL*GVGGMRQTGPG
Trigger: TCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp ACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATaGAGTGGACGGAGGAGCTCTTCTTACTGGACGACT +
Preference number: 3 (lower is better)
Translates to: TWAGSADLLWTG*SGRRSSSYWTT
Trigger: AGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp CTTTTCTGTTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGG +
Preference number: 3 (lower is better)
Translates to: LFCSVCRGTPWT*AGSADLLWTGW
Trigger: CCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACTTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 3 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: GPLGNGPCWPMSAECCSLSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...GAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 3 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp ACCCCAGTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 3 (lower is better)
Translates to: TPVVMDGWRNIPCTGLLSTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...CGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 3 (lower is better)
Translates to: HSATVPVGQCLRSAVASSKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...CGAGGAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR TCA 72 bp GCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGACTACGACATGGCCAC +
Preference number: 3 (lower is better)
Translates to: ASPGSGGQSGLS*HPQRCRLRHGH
Trigger: GTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp CTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGATTGGCCAGCGTTGTGG +
Preference number: 3 (lower is better)
Translates to: LFLLDDCEEWEE*DRLARDWPALW
Trigger: CCACAACGCTGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp TGGACGACTGTGAGGAGTGGGAGGAATGAGACAGACTaGCCCGGGATTGGCCAGCGTTGTGGTCAAACTGCA +
Preference number: 3 (lower is better)
Translates to: WTTVRSGRNETD*PGIGQRCGQTA
Trigger: TGCAGTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTCACAGTCGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp ATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 3 (lower is better)
Translates to: ITRFRRPIRAELTSPKMQVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...CTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 3 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp TCCTCCTGGATGACTACCTCCTCCTGTCCTTCCCTATaGCAACCTCCTCCTGGATGGCTACCTCCTGGATCC +
Preference number: 3 (lower is better)
Translates to: SSWMTTSSCPSL*QPPPGWLPPGS
Trigger: GGATCCAGGAGGTAGCCATCCAGGAGGAGGTTGTCATAGGGAAGGACAGGAGGAGGTAGTCATCCAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp ACCCCAGTTGTGATGGACGGCTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGTGATGATCTGTCCATT +
Preference number: 3 (lower is better)
Translates to: TPVVMDGWRNIP*TGLLSGDDLSI
Trigger: AATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 72 bp AGACTGGCCCGGGATTGGCCAGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGGTCTGTTGGTACGAGC +
Preference number: 3 (lower is better)
Translates to: RLARDWPALWSN*IRQKIRSVGTS
Trigger: GCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp ATGATGGGAATGTTGACCCCAGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGT +
Preference number: 3 (lower is better)
Translates to: MMGMLTPVVMDG*RNIPCTGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp CCATTTCTTTTCTGTTCTGTTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACG +
Preference number: 3 (lower is better)
Translates to: PFLFCSVCRGTP*TWAGSADLLWT
Trigger: CGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GCAAATGCTGTCCCACAAGCAAAGGGCTGTGTGAGGTACAGCTCTGTGTCAGGGGATACCAAAGGCAACTaGCCCGGCTTAGCGAGTTCC +
Preference number: 3 (lower is better)
Translates to: ANAVPQAKGCVRYSSVSGDTKGN*PGLASS
Trigger: GGAACTCGCTAAGCCGGGCAAGTTGCCTTTGGTATC...CCCTGACACAGAGCTGTACCTCACACAGCCCTTTGCTTGTGGGACAGCATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR TCA 72 bp AAGTGGCATCACCAGGTTCCGGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGATGCAGACTACGACATG +
Preference number: 3 (lower is better)
Translates to: KWHHQVPEANQG*ADIPKDADYDM
Trigger: CATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp AATGGTGTACCAGGCAATATGGACACTTTCGGGAAGTTGTGCAGTGTTTCCCACAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 3 (lower is better)
Translates to: NGVPGNMDTFGKLCSVSHSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...GTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGACTACGACATGGCCACTCGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 3 (lower is better)
Translates to: PIRAELTSPKMQTTTWPLDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...GAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp TGTTTGTCGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 3 (lower is better)
Translates to: CLSRDSLDLGRFGRFAVDVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...GTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp AGGAGGCCTCACCATGAGAACAACAGAGTCTGCTCTTaGGTGCCTCTGGCTCACGACCTTCACATTCTAGGT +
Preference number: 3 (lower is better)
Translates to: RRPHHENNRVCS*VPLAHDLHILG
Trigger: ACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACCCAAGAGCAGACTCTGTTGTTCTCATGGTGAGGCCTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CCA 72 bp CAGGACAACGCCTACAAGGTGGAAGCACAGCTATATTaGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCAT +
Preference number: 3 (lower is better)
Translates to: QDNAYKVEAQLY*LCREWTEVEAH
Trigger: ATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp GCTGAGCTGACATCCCCAAAGATGCAGACTACGACATaGCCACTCAGGACAGTCATGGCAGCTTCACTTCGA +
Preference number: 3 (lower is better)
Translates to: AELTSPKMQTTT*PLRTVMAASLR
Trigger: TCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: VRPICCGRDGVDGGALLTSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...AGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp ACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: TASGRRSGLLVRAQTRREFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...CTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CCA 72 bp AGTCTGACAAGTCACTGCAGGACAACGCCTACAAGGTaGAAGCACAGCTATATTGGCTCTGCAGGGAGTGGA +
Preference number: 3 (lower is better)
Translates to: SLTSHCRTTPTR*KHSYIGSAGSG
Trigger: TCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTGCAGTGACTTGTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp TCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 3 (lower is better)
Translates to: SADLLWTGWSGRRSSSYWCIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...CCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGAAGTGCATTCTCCTCAGCGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 3 (lower is better)
Translates to: VGQCLRSAVASSKCILLSVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...GCTGAGGAGAATGCACTTCGAGGAGGCTACAGCACTCCGCAGACATTGGCCAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATGATCTGTCCATTCCAGGAGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 3 (lower is better)
Translates to: VTSRALGCCRVMICPFQESAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...CTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGACTACGACATGGCCACTCCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PIRAELTSPKMQTTTWPLLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...GAGTGGCCATGTCGTAGTCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp TGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 3 (lower is better)
Translates to: WTGWSGRRSSSYWTTVRSSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...ACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CTCCAGTTCCTGTCTGGTTACATAATTCATCATAGCCACAGTCACCATGCCAGCTGCACTGCTCTGTCCTaGGGGTCTGCAGCAAACCAT +
Preference number: 3 (lower is better)
Translates to: LQFLSGYIIHHSHSHHASCTALS*GSAANH
Trigger: ATGGTTTGCTGCAGACCCCAAGGACAGAGCAGTGCA...GCTGGCATGGTGACTGTGGCTATGATGAATTATGTAACCAGACAGGAACTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp TCTAACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 3 (lower is better)
Translates to: SNRANWATRQRSLLANVCSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...GCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp GGAAAAGTCTCTTTTCGGCATCTGTGTGGTGGGCCGTaGGCCAGACACTTTAGGCAGGATGTGATTGTACCA +
Preference number: 3 (lower is better)
Translates to: GKVSFRHLCGGP*ARHFRQDVIVP
Trigger: TGGTACAATCACATCCTGCCTAAAGTGTCTGGCTCACGGCCCACCACACAGATGCCGAAAAGAGACTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp GAGGATATTGTCATTGAAGTATGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGCAAATGCTGTCCCACA +
Preference number: 3 (lower is better)
Translates to: EDIVIEVCRAHE*VQDADGKCCPT
Trigger: TGTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACATACTTCAATGACAATATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 72 bp CTACCTCCTGGATCCCTAGGGCAGGAAGTTCGGGGATaGTTTGACAGGCACATGTGTTGTGTGTGTACATTT +
Preference number: 3 (lower is better)
Translates to: LPPGSLGQEVRG*FDRHMCCVCTF
Trigger: AAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTCCTGCCCTAGGGATCCAGGAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp GGCTATGAAACCCAACTTGAGCTCTGCAAGGCATATTaGGTCATCACCCTCTTTCCAGTTCCAGCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: GYETQLELCKAY*VITLFPVPAGD
Trigger: ATCCCCAGCTGGAACTGGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGTTTCATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR TCA 72 bp ACAGTCCACATGACTTGCATGGGTGCCTTAGAAGTATaGAACAGGGAGCATAAAGAATGGCGGAGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: TVHMTCMGALEV*NREHKEWRRRP
Trigger: AGGCCTCCTCCGCCATTCTTTATGCTCCCTGTTTCATACTTCTAAGGCACCCATGCAAGTCATGTGGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR TCA 72 bp GGTGTGCTATGCATGAGGGATGAGGTACAACGGGGGTaGTATGAACTGATGAAAGGAGAGACCACCTCTCAA +
Preference number: 3 (lower is better)
Translates to: GVLCMRDEVQRG*YELMKGETTSQ
Trigger: TTGAGAGGTGGTCTCTCCTTTCATCAGTTCATATCACCCCCGTTGTACCTCATCCCTCATGCATAGCACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp ATAGAGAAGAGATTGGCAAGCATTGTGGAGAGGCCTTaGGCCAGACAGCTCTGGGCTATGAAACCCAACTTG +
Preference number: 3 (lower is better)
Translates to: IEKRLASIVERP*ARQLWAMKPNL
Trigger: CAAGTTGGGTTTCATAGCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCTTCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 72 bp GGTGTACCAGGCAATATGGACACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTCTTGAGGTACTCAATG +
Preference number: 3 (lower is better)
Translates to: GVPGNMDTFGKL*SVSHSLLRYSM
Trigger: CATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 72 bp CAGACAGCTCTGGGCTATGAAACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATCACCCTCTTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: QTALGYETQLEL*KAYCVITLFPV
Trigger: AACTGGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGTTTCATAGCCCAGAGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CCA 72 bp CGTTGGAATGAAACAGTTGTTGAGGTGACTGTACACTaGGCATGCATGCAACAGCAGAGCTCAGACATCACG +
Preference number: 3 (lower is better)
Translates to: RWNETVVEVTVH*ACMQQQSSDIT
Trigger: CGTGATGTCTGAGCTCTGCTGTTGCATGCATGCCCAGTGTACAGTCACCTCAACAACTGTTTCATTCCAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp GTGGTCAAACTGCATCAGGCAGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTAGGGAGGATTGGTGAT +
Preference number: 3 (lower is better)
Translates to: VVKLHQAEDQVC*YELKLVGRIGD
Trigger: ATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGTTTGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGCTTGTGGATTTATATaGGTTGATCTGGTTAGCCAT +
Preference number: 3 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPACGFI*VDLVSH
Trigger: ATGGCTAACCAGATCAACCAATATAAATCCACAAGC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp GGAGAATATAGAAATGAACCTGACTGTTCTTTGTCCAGAGCAGAGAGTGGATGCGGAAGCACAGCTATATaGGCTCTGCAGGGAGTGGAC +
Preference number: 3 (lower is better)
Translates to: GEYRNEPDCSLSRAESGCGSTAI*ALQGVD
Trigger: GTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCC...GCATCCACTCTCTGCTCTGGACAAAGAACAGTCAGGTTCATTTCTATATTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp CATGTGTTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTGCAGTTGCCATAAGCTTTaGCCAGATGGGGCCACCACA +
Preference number: 3 (lower is better)
Translates to: HVLCVYISIEDSKQQDRCSCHKL*PDGATT
Trigger: TGTGGTGGCCCCATCTGGCAAAAGCTTATGGCAACT...GCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp CTCCAGTTCCTGTCTGGTTACATAATTCATCATAGCCACAGTCACCATGCCAGCTTATCTCCTGCTCTATaGGAGGGCAGTGTTCTAGCC +
Preference number: 3 (lower is better)
Translates to: LQFLSGYIIHHSHSHHASLSPAL*EGSVLA
Trigger: GGCTAGAACACTGCCCTCCAATAGAGCAGGAGATAA...GCTGGCATGGTGACTGTGGCTATGATGAATTATGTAACCAGACAGGAACTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp CAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGGATTGGTGATGACGTACCTCACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: QVCWYELKLVGRIGDDVPHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...AGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp TTGGTGATGACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 3 (lower is better)
Translates to: LVMTYLFVHWLGVLRWASCIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...AGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GCAGACTACGACATGGCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 3 (lower is better)
Translates to: ADYDMATQDSHGSFTSSQVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...TTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp GCAGACTACGACATGGCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 3 (lower is better)
Translates to: ADYDMATQDSHGSFTSSQIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...TTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp CTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCACAAACACAATGTGTT +
Preference number: 3 (lower is better)
Translates to: LSGSCAVFPTPS*GTQWSPQTQCV
Trigger: AACACATTGTGTTTGTGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp AACAGAGCCTCAAGCTCAAGGTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACGTTGACATCATCCCGG +
Preference number: 3 (lower is better)
Translates to: NRASSSRLGEML*RKTISTLTSSR
Trigger: CCGGGATGATGTCAACGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAACCTTGAGCTTGAGGCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 72 bp CCCGGTCCAGAAAAGCCACCAGAACAAGGCGACCTTTaGATTTTGTGTATGAAGACTGTTGCAACTAGAAGG +
Preference number: 3 (lower is better)
Translates to: PGPEKPPEQGDL*ILCMKTVATRR
Trigger: CCTTCTAGTTGCAACAGTCTTCATACACAAAATGCAAAGGTCGCCTTGTTCTGGTGGCTTTTCTGGACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp AAGACAATCTCCACGTTGACATCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAGTTAGAGACACTCTCC +
Preference number: 3 (lower is better)
Translates to: KTISTLTSSRSL*RKSFRKLETLS
Trigger: GGAGAGTGTCTCTAACTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 72 bp GATGGAGATCACTCTCATGATGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATACTTATTGGCAAGGAT +
Preference number: 3 (lower is better)
Translates to: DGDHSHDVGGIF*IRVSAILIGKD
Trigger: ATCCTTGCCAATAAGTATTGCGCTGACCCGGATGCAGAAGATGCCTCCAACATCATGAGAGTGATCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACAACAGAGTCTGCTCTaGGGTGCCTCTGGCTCACGA +
Preference number: 3 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQQQSLL*GASGSR
Trigger: TCGTGAGCCAGAGGCACCCAAGAGCAGACTCTGTTG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR-3UTR CAA 90 bp GTCCTTACAGTCTGCCTCATTACTTCACTATTTCAGATCCCCTGTATCTCAACCATAATCTCCCAGGGCTaGGCTGAGGTAAGGCAACCA +
Preference number: 3 (lower is better)
Translates to: VLTVCLITSLFQIPCISTIISQG*AEVRQP
Trigger: TGGTTGCCTTACCTCAGCCAAGCCCTGGGAGATTAT...GGTTGAGATACAGGGGATCTGAAATAGTGAAGTAATGAGGCAGACTGTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTGTGGATTTATATTGGTaGATCTGGTTAGCCATGTGG +
Preference number: 3 (lower is better)
Translates to: GSAGSGQRWKLILPTLVIVDLYW*IWLAMW
Trigger: CCACATGGCTAACCAGATCAACCAATATAAATCCAC...AATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGGAGAGATGGTTCAACTaGAGAGCCTATGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSERWFN*RAYVSV
Trigger: CACAGAAACATAGGCTCTCAAGTTGAACCATCTCTC...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp AGCCACCAGAACAAGGCGACCTTTGCATTTTGTGTATaGAGACTGTTGCAACTAGAAGGTTCTGGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: SHQNKATFAFCV*RLLQLEGSGCA
Trigger: AGCACACCCAGAACCTTCTAGTTGCAACAGTCTTCATACACAAAATGCAAAGGTCGCCTTGTTCTGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp TCCTCTTCTTTCTGTCCCTCTGCACTGCTCTGTCCTTaGGGTCTGCAGCAAACCATTACTTTTTATAGACTC +
Preference number: 3 (lower is better)
Translates to: SSSFCPSALLCP*GLQQTITFYRL
Trigger: GAGTCTATAAAAAGTAATGGTTTGCTGCAGACCCCAAGGACAGAGCAGTGCAGAGGGACAGAAAGAAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTACAACAGAGTCTGCTCTaGGGTGCCTCTGGCTCACGA +
Preference number: 3 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLQQSLL*GASGSR
Trigger: TCGTGAGCCAGAGGCACCCAAGAGCAGACTCTGTTG...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp CACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGCTATCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 3 (lower is better)
Translates to: HHNNHHPLSLQRDHLTGLSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...TAGCCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp AATTCTACAAAGTGTGACAACAGAGTAACCACAGTCTaGCAAGTCACTGCAGGACAACGCCTACAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: NSTKCDNRVTTV*QVTAGQRLQGG
Trigger: TCCACCTTGTAGGCGTTGTCCTGCAGTGACTTGTCAGACTGTGGTTACTCTGTTGTCACACTTTGTAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp CTAATCATATCAGCTTGGTTTGCTCCATTGAGCCCCTaGAAACTTGGCTATAGCCTCCAGACAGTTCTACTG +
Preference number: 3 (lower is better)
Translates to: LIISAWFAPLSP*KLGYSLQTVLL
Trigger: CAGTAGAACTGTCTGGAGGCTATAGCCAAGTTTTCAGGGGCTCAATGGAGCAAACCAAGCTGATATGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp GTACCCCATTTCCATGGTGTAAAAACTGACCGAGAATaGCCTGCTACTTTCCCACTCATTCCAGTCTTCATG +
Preference number: 3 (lower is better)
Translates to: VPHFHGVKTDRE*PATFPLIPVFM
Trigger: CATGAAGACTGGAATGAGTGGGAAAGTAGCAGGTCATTCTCGGTCAGTTTTTACACCATGGAAATGGGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp GTGTCAGGGTCATCGTCATCGTCTTGGTCCAAAAACTaGACATTGGTATCATTCACGAGTTCCGTGATGATG +
Preference number: 3 (lower is better)
Translates to: VSGSSSSSWSKN*TLVSFTSSVMM
Trigger: CATCATCACGGAACTCGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR GCA 72 bp TCATCAGTGGTGGAGGTGAGGCTGAAGGTAAACCTTTaGATCTCCACTCTAAGAGCTTTCAAACTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: SSVVEVRLKVNL*ISTLRAFKLEN
Trigger: ATTCTCCAGTTTGAAAGCTCTTAGAGTGGAGATGCAAAGGTTTACCTTCAGCCTCACCTCCACCACTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp ACTTCGAGTCAAGATGACTTTCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCCAGTGGAGTCGTACTT +
Preference number: 3 (lower is better)
Translates to: TSSQDDFLNLLG*TPVKHSSGVVL
Trigger: AAGTACGACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTTGACTCGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 72 bp GAATTAGCCTGCAAGACCCCGATGCTGTCATCAAACTaGATAGATTTGATGTTGAGTGACGCCAAGATGCAT +
Preference number: 3 (lower is better)
Translates to: ELACKTPMLSSN*IDLMLSDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp CAATCTCCTTGGGTGCACACCAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACATTGGAGTCCATGTTGT +
Preference number: 3 (lower is better)
Translates to: QSPWVHTSETFQ*SRTFSHWSPCC
Trigger: ACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp TTAAATCAGCCCGACTTAATGGTGTACCAGGCAATATaGACACTTTCGGGAAGTTGTGCAGTGTTTCCCACT +
Preference number: 3 (lower is better)
Translates to: LNQPDLMVYQAI*TLSGSCAVFPT
Trigger: AGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACCATTAAGTCGGGCTGATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CTCCAGTTCCTGTCTGGTTACATAATTCATCATAGCCACAGTCACCATGCCAGCACTAAGTATTTCCTATaGAAAAGTCTCCACAGCCCA +
Preference number: 3 (lower is better)
Translates to: LQFLSGYIIHHSHSHHASTKYFL*KSLHSP
Trigger: TGGGCTGTGGAGACTTTTCAATAGGAAATACTTAGT...GCTGGCATGGTGACTGTGGCTATGATGAATTATGTAACCAGACAGGAACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp CTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTGGTTCCCAGGGTTTCTGCCTCCATGTTaGTTAAAAGTCCCGCCGAAT +
Preference number: 3 (lower is better)
Translates to: LAMKNPKVPSWILRWFPGFLPPC*LKVPPN
Trigger: ATTCGGCGGGACTTTTAACAAACATGGAGGCAGAAA...CCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp TCTTTGGCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 3 (lower is better)
Translates to: SLASLAMKNPKVPSWILRRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...CCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR TCA 72 bp GATGCTGTCATCAAACTGCATAGATTTGATGTTGAGTaGCGCCAAGATGCATTCCTTGTCCTGAAGCGAAGT +
Preference number: 3 (lower is better)
Translates to: DAVIKLHRFDVE*RQDAFLVLKRS
Trigger: ACTTCGCTTCAGGACAAGGAATGCATCTTGGCGTCACTCAACATCAAATCTATGCAGTTTGATGACAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 72 bp CTTTCTGTCCCTCTGCACTGCTCTGTCCTTGGGGTCTaGAGCAAACCATTACTTTTTATAGACTCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: LSVPLHCSVLGV*SKPLLFIDSFK
Trigger: TTTGAAAGAGTCTATAAAAAGTAATGGTTTGCTGCAGACCCCAAGGACAGAGCAGTGCAGAGGGACAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp GATTTCCAGGCAGATCTGGGTTTATGTTTGAAATGTTaGAGTTCTGGTCAAATGTGTACACAGCGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: DFQADLGLCLKC*SSGQMCTQRKE
Trigger: CTCCTTCCGCTGTGTACACATTTGACCAGAACTGCAACATTTCAAACATAAACCCAGATCTGCCTGGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp CATAATGGCACTTTTGAATGTAAGCAGCAAAGACATTGTGCTAACGTGGGCACAACTCATGGGCTTGATTaGAATGTTTCTGGGATAGGC +
Preference number: 3 (lower is better)
Translates to: HNGTFECKQQRHCANVGTTHGLD*NVSGIG
Trigger: GCCTATCCCAGAAACATTCAAATCAAGCCCATGAGT...TGTGCCCACGTTAGCACAATGTCTTTGCTGCTTACATTCAAAAGTGCCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR-3UTR CAA 90 bp ATTCCTTGTCCTGAAGCGAAGTATCATCAATATTATTCTGATTGGCTGACAGGATTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 3 (lower is better)
Translates to: IPCPEAKYHQYYSDWLTGFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...TCCTGTCAGCCAATCAGAATAATATTGATGATACTTCGCTTCAGGACAAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp AGATGGGGCCACCACATGGTCATTTTCTGGACAATCTaGGAATCATGCTTGACCTCTTCCTCATTTATTACT +
Preference number: 3 (lower is better)
Translates to: RWGHHMVIFWTI*ESCLTSSSFIT
Trigger: AGTAATAAATGAGGAAGAGGTCAAGCATGATTCTCAGATTGTCCAGAAAATGACCATGTGGTGGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp GCTGTTATTGAGTGCAATCACAGGATCTCAAGTTGCTaGGAGATGGTTCAACTTGAGAGCCTATGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: AVIECNHRISSC*EMVQLESLCFC
Trigger: ACAGAAACATAGGCTCTCAAGTTGAACCATCTCTCAGCAACTTGAGATCCTGTGATTGCACTCAATAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp TTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATaGCAGAGTTGGGTAGGTCATTTCAGAGCACCAGCA +
Preference number: 3 (lower is better)
Translates to: LQDKRVITGCYR*QSWVGHFRAPA
Trigger: TGCTGGTGCTCTGAAATGACCTACCCAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp AAGATGACTTTCTCAATCTCCTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCGTACTTTTTCACATTG +
Preference number: 3 (lower is better)
Translates to: KMTFSISLGAHQ*NIPVESYFFTL
Trigger: CAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR TCA 72 bp GTGTCAGGGTCATCGTCATCGTCTTGGTCCAAAAACTaGACATTGGTATCATTCACCAACTCCGTTATCATT +
Preference number: 3 (lower is better)
Translates to: VSGSSSSSWSKN*TLVSFTNSVII
Trigger: AATGATAACGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR GCA 72 bp TGGTCTGATTCCCAAAGCATCCAAGCATCATTAGTTTaGCAAGATAGCTTTTCTGAAACCCTAATCAGGGAC +
Preference number: 3 (lower is better)
Translates to: WSDSQSIQASLV*QDSFSETLIRD
Trigger: GTCCCTGATTAGGGTTTCAGAAAAGCTATCTTGGCAAACTAATGATGCTTGGATGCTTTGGGAATCAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp TGTGGTGGACCCATGGGTGTTTTAATAATTGAGTACTaGATGACAAGGTGGAAATGTAGGAAGAAGGTAGGT +
Preference number: 3 (lower is better)
Translates to: CGGPMGVLIIEY*MTRWKCRKKVG
Trigger: ACCTACCTTCTTCCTACATTTCCACCTTGTCATGCAGTACTCAATTATTAAAACACCCATGGGTCCACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp TTTTCACATTGGAGTCCATGTTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGTCATGCCTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: FSHWSPCCQSDH*QELTRGHASSA
Trigger: AGCTGATGAGGCATGACCCCTTGTTAATTCCTGGCAATGATCAGATTGACAACATGGACTCCAATGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CCA 72 bp TTGAGTGCAATCACAGGATCTCAAGTTGCTGAGAGATaGTTCAACTTGAGAGCCTATGTTTCTGTGATGCTT +
Preference number: 3 (lower is better)
Translates to: LSAITGSQVAER*FNLRAYVSVML
Trigger: AAGCATCACAGAAACATAGGCTCTCAAGTTGAACCATCTCTCAGCAACTTGAGATCCTGTGATTGCACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp GTGATACTGCAGCATCTGAGTGATGATCCTGATCTTTaGGTGGTAGTTTTTGATGGAGATCACTCTCATGAT +
Preference number: 3 (lower is better)
Translates to: VILQHLSDDPDL*VVVFDGDHSHD
Trigger: ATCATGAGAGTGATCTCCATCAAAAACTACCACCCAAAGATCAGGATCATCACTCAGATGCTGCAGTATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCACTCATGGGCTTGATTaGAATGTTTCTGGGATAGGC +
Preference number: 3 (lower is better)
Translates to: SPQRKREKEEKCASRNLATHGLD*NVSGIG
Trigger: GCCTATCCCAGAAACATTCAAATCAAGCCCATGAGT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATACTCATGGGCTTGATTaGAATGTTTCTGGGATAGGC +
Preference number: 3 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYTHGLD*NVSGIG
Trigger: GCCTATCCCAGAAACATTCAAATCAAGCCCATGAGT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
3UTR TCA 72 bp CCTTGTGCCTCCAGTCAAAAACTAAGTATTTCCTATTaGAAAGTCTCCACAGCCCAGCCTATTATTTTTCCC +
Preference number: 3 (lower is better)
Translates to: PCASSQKLSISY*KVSTAQPIIFP
Trigger: GGGAAAAATAATAGGCTGGGCTGTGGAGACTTTTCAATAGGAAATACTTAGTTTTTGACTGGAGGCACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp CTACCTCTTTCTATCATTCTTTCCACGAGGTCCTCCTaGACGATGATATTGACAACTCATAATGGCACTTTT +
Preference number: 3 (lower is better)
Translates to: LPLSIILSTRSS*TMILTTHNGTF
Trigger: AAAAGTGCCATTATGAGTTGTCAATATCATCGTCCAGGAGGACCTCGTGGAAAGAATGATAGAAAGAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp AGTGAAACATTCCAGTGGAGTCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCTGATCATTGCCAGGAA +
Preference number: 3 (lower is better)
Translates to: SETFQWSRTFSH*SPCCQSDHCQE
Trigger: TTCCTGGCAATGATCAGATTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp ACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTTGGTCCAAAGGGACTCCTaGTTTTATCAAGAGGTTATG +
Preference number: 3 (lower is better)
Translates to: TLFTRQESYHWLLQMTELVQRDS*FYQEVM
Trigger: CATAACCTCTTGATAAAACAAGGAGTCCCTTTGGAC...CAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp TATGGTTCAGGAAGGAAAGAAGAGCGTGGATTGACATaGATGTACTTAGGTAACCCCAAATGCAAAATCATG +
Preference number: 3 (lower is better)
Translates to: YGSGRKEERGLT*MYLGNPKCKIM
Trigger: CATGATTTTGCATTTGGGGTTACCTAAGTACATTCATGTCAATCCACGCTCTTCTTTCCTTCCTGAACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR TCA 72 bp CTGAAGCGAAGTATCATCAATATTATTCTGATTGGCTaGCAGGATAACGCACATGTCACAGAGGTTGATGTT +
Preference number: 3 (lower is better)
Translates to: LKRSIINIILIG*QDNAHVTEVDV
Trigger: AACATCAACCTCTGTGACATGTGCGTTATCCTGTCAGCCAATCAGAATAATATTGATGATACTTCGCTTCAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR GCA 72 bp TCTGAAACACCGTCTAGTCTACAACGCTTGATTAACTaGTTCAAACTGCTTGTTTCTTATCTCCTGCTCTAT +
Preference number: 3 (lower is better)
Translates to: SETPSSLQRLIN*FKLLVSYLLLY
Trigger: ATAGAGCAGGAGATAAGAAACAAGCAGTTTGAAGCAGTTAATCAAGCGTTGTAGACTAGACGGTGTTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR GCA 72 bp CCAAGTCAAACTTCCACAGCTGTCATGGTACTTACTTaGTATGTAGCCCATCCAATTAAAAGTCTTTATTGG +
Preference number: 3 (lower is better)
Translates to: PSQTSTAVMVLT*YVAHPIKSLYW
Trigger: CCAATAAAGACTTTTAATTGGATGGGCTACATAGCAAGTAAGTACCATGACAGCTGTGGAAGTTTGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp TGGAATATTCCAAAGAGGACCACCATTGGCCTAATGTaGATGGAAAGACTATTTAATCCTACAGAGAACTCA +
Preference number: 3 (lower is better)
Translates to: WNIPKRTTIGLM*MERLFNPTENS
Trigger: TGAGTTCTCTGTAGGATTAAATAGTCTTTCCATCCACATTAGGCCAATGGTGGTCCTCTTTGGAATATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp GGTCATCGTCATCGTCTTGGTCCAAAAACTGAACATTaGTATCATTCACCAACTCCGTTATCATTAGAATGT +
Preference number: 3 (lower is better)
Translates to: GHRHRLGPKTEH*YHSPTPLSLEC
Trigger: ACATTCTAATGATAACGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
3UTR-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGTGGATTTATATTGGTaGATCTGGTTAGCCATGTGG +
Preference number: 3 (lower is better)
Translates to: HSPQRKREKEEKCASRNLVDLYW*IWLAMW
Trigger: CCACATGGCTAACCAGATCAACCAATATAAATCCAC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
3UTR TCA 72 bp TACTTAACTCTGAAACACCGTCTAGTCTACAACGCTTaGTTAACTGCTTCAAACTGCTTGTTTCTTATCTCC +
Preference number: 3 (lower is better)
Translates to: YLTLKHRLVYNA*LTASNCLFLIS
Trigger: GGAGATAAGAAACAAGCAGTTTGAAGCAGTTAATCAAGCGTTGTAGACTAGACGGTGTTTCAGAGTTAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp CAGAGTAGGGTTGTCCAAACTCTTTCTACATACTATTaGAGATGTGGGCTAAAAATGAAGAGACTATCCAAT +
Preference number: 3 (lower is better)
Translates to: QSRVVQTLSTYY*RCGLKMKRLSN
Trigger: ATTGGATAGTCTCTTCATTTTTAGCCCACATCTCCAATAGTATGTAGAAAGAGTTTGGACAACCCTACTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp ATGGGTGTTTTAATAATTGAGTACTGCATGACAAGGTaGAAATGTAGGAAGAAGGTAGGTGTTCTTCATGGT +
Preference number: 3 (lower is better)
Translates to: MGVLIIEYCMTR*KCRKKVGVLHG
Trigger: ACCATGAAGAACACCTACCTTCTTCCTACATTTCCACCTTGTCATGCAGTACTCAATTATTAAAACACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CCA 72 bp ATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAATATTCGGCTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: MKNPKVPSWILR*FPGLINIRLSL
Trigger: CAGAGAGAGCCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CCA 72 bp GCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCAGGGTTAATTAATATT +
Preference number: 3 (lower is better)
Translates to: ASLAMKNPKVPS*ILRWFPGLINI
Trigger: AATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR-3UTR CAA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGCTTCCTTCTAGCCTTTaGATATATACTCTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: PILKRYSVLIISAWFAPLLPSSL*IYTLSC
Trigger: ACAACTCAGAGTATATATCAAAAGGCTAGAAGGAAG...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp CGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTaGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGTPWTWAGSAD*LWTGWSGRRSS
Trigger: AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp GTTGTGATGGACGGCTGGCGTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGC +
Preference number: 4 (lower is better)
Translates to: VVMDGWRNIPCTGLLSGDAHHMR*PRLSHG
Trigger: GCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGC...ATCACCCGACAACAGCCCAGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp CACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGCGGTCCACAGGTACTTaGGCGTCCGCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: HSATVPVGQCLRSAVASSRSTGT*ASARAR
Trigger: TCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCG...CGAGGAGGCTACAGCACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGATTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: AGLPGLGPVRPICCGRDGFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...TCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp AAAGGCAACTTGCCCGGCTTAGCGAGTTCCGTGATGATGGGAATGTTGACCCCAGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGC +
Preference number: 4 (lower is better)
Translates to: KGNLPGLASSVMMGMLTPAHHMR*PRLSHG
Trigger: GCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGC...TGGGGTCAACATTCCCATCATCACGGAACTCGCTAAGCCGGGCAAGTTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACCGAAGAAAGTCACCATaGAGGAGGCCAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDRRKSP*RRPRKP
Trigger: GGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCG...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp ATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAGCGGTCCACAGGTACTTaGGCGTCCGCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ITRFRRPIRAELTSPKMQRSTGT*ASARAR
Trigger: TCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCG...CTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGACACAACCAGGACTCTaGCAGTCAGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRTQPGL*QSVSGR
Trigger: CCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGT...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPRKPTT*VGPGCR
Trigger: GCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp ATGATGGGAATGTTGACCCCAGTTGTGATGGACGGCTGGCGTAACATCCCGTGCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: MMGMLTPVVMDGWRNIPCVLPPQ*QQTVHR
Trigger: CCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGAC...GCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCCCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGTCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCACCAGCCGACCTCGGCTaGCACCACCTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPPADLG*HHLLFF
Trigger: GAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGG...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp TGTAGCCTCCTCGAAGTGCATTCTCCTCAGCTATTAGAGCCTCGAGCTCTGGTGAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: CSLLEVHSPQLLEPRALVRKPTT*VGPGCR
Trigger: GCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCT...CACCAGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGAGGAGGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp TCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: SADLLWTGWSGRRSSSYWLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...CCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 72 bp TCTTTTCTGTTCTGTTTGTCGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATG +
Preference number: 4 (lower is better)
Translates to: SFLFCLSRDSLD*GRFGRFAVDGM
Trigger: CATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGATTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGLPGLGPVRPICCGRDGFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...TCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAACACAACCAGGACTCTaGCAGTCAGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPTQPGL*QSVSGR
Trigger: CCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGGATTGGTGATGACGTACCTGGGCCTCCTTCGTCTTaGCCCCGCAGTGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QVCWYELKLVGRIGDDVPGPPSS*PRSGSK
Trigger: TTTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCC...AGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRAHHMR*PRLSHG
Trigger: GCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGC...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCGAAGAAAGTCACCATaGAGGAGGCCAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GITRFRRPIRAELTSPKMRRKSP*RRPRKP
Trigger: GGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCG...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp CAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGGATTGGTGATGACGTACCTGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: QVCWYELKLVGRIGDDVPVLPPQ*QQTVHR
Trigger: CCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGAC...AGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp ACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTAAATTCCAAAACATCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TLAGGAEVGISQPVNSKTSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...TGTTTTGGAATTTACCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp TCTAACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SNRANWATRQRSLLANVCRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...GCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR GCA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGATTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: AGLPGLGPVRPICCGRDGFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...TCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp TGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: WAGSADLLWTGWSGRRSSSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...AGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GAATTAACAAGGGGTCATGCCTCATCAGCTTCGGGGAGGTGTTGGGCGAGTTCCTTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ELTRGHASSASGRCWASSFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...GGAACTCGCCCAACACCTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp ACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TYLFVHWLGVLRWASLSRSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...CCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp TGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WTGWSGRRSSSYWTTVRSDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...ACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CAA 72 bp GCAGGACAACGCCTACAAGGTGGAAGCACAGCTATATaGGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: AGQRLQGGSTAI*ALQGVDRGGSS
Trigger: TGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCCAATATAGCTGTGCTTCCACCTTGTAGGCGTTGTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp GTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGAAGTGCATTCTCCTCAGCCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: VGQCLRSAVASSKCILLSRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...GCTGAGGAGAATGCACTTCGAGGAGGCTACAGCACTCCGCAGACATTGGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGTGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCGGTCCACAGGTACTTaGGCGTCCGCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGRSTGT*ASARAR
Trigger: TCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp GTGATGACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VMTYLFVHWLGVLRWASLVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...GAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACCAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp ACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: TYLFVHWLGVLRWASLSRRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...CCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCATACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGICRGTP*TWAGSA
Trigger: GGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CAGACTACGACATGGCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: QTTTWPLRTVMAASLRVKFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...CTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: GITRFRRPIRAELTSPKMQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR TCA 90 bp TCCAGGAGGTGTGAATCCTTGGGAATTAGCCTGCAAGACCCCGATGCTGTCATCCAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRRCESLGISLQDPDAVIQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...GATGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR TCA 90 bp GTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VRPICCGRDGVDGGALLTFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...AGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR GCA 90 bp GTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: VRPICCGRDGVDGGALLTTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...AGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRRKPTT*VGPGCR
Trigger: GCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCACACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLICRGTP*TWAGSA
Trigger: GGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILAHHMR*PRLSHG
Trigger: GCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGC +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTAHHMR*PRLSHG
Trigger: GCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGC...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR TCA 90 bp TTTTTCTGTTTGTCGCGGGACTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: FFCLSRDSLDLGRFGRFALGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...AGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR TCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CATGTGTTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTGCCCAGCCGACCTCGGCTaGCACCACCTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HVLCVYISIEDSKQQDRCPADLG*HHLLFF
Trigger: GAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGG...GCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAACACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCACCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GSAGSGQRWKLILPTLVIDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...AATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGGGCCTCCTTCGTCTTaGCCCCGCAGTGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIGPPSS*PRSGSK
Trigger: TTTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TCCTTGTGCAGAAAGTCCTTCAGGAAGTTAGAGACACTCTCCAGAGTAATGTGTGGGCCTCCTTCGTCTTaGCCCCGCAGTGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLCRKSFRKLETLSRVMCGPPSS*PRSGSK
Trigger: TTTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCC...ACACATTACTCTGGAGAGTGTCTCTAACTTCCTGAAGGACTTTCTGCACAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCATTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGGAGTGTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: RANWATRQRSLLANVCGVSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...CACTCCGCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: GSAGSGQRWKLILPTLVIVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...AATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLACRGTP*TWAGSA
Trigger: GGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYCRGTP*TWAGSA
Trigger: GGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTCCTTACAGTCTGCCTCATTACTTCACTATTTCAGATCCCCTGTATCTCAACCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: VLTVCLITSLFQIPCISTVLPPQ*QQTVHR
Trigger: CCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGAC...GGTTGAGATACAGGGGATCTGAAATAGTGAAGTAATGAGGCAGACTGTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp GTTGGCCAATGTCTGCGGAGTGCTGTAGCCTCCTCGAAGTGCATTCTCCTCAGCACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: VGQCLRSAVASSKCILLSTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...GCTGAGGAGAATGCACTTCGAGGAGGCTACAGCACTCCGCAGACATTGGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp GATCACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: DHHNNHHPLSLQRDHLTGFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...CCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTCCACAGGTACTTaGGCGTCCGCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIRSTGT*ASARAR
Trigger: TCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCG...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CACATGTCACAGAGGTTGATGTTGACAGCCCTTAAATCAGCCCGACTTAATGGTACACAACCAGGACTCTaGCAGTCAGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HMSQRLMLTALKSARLNGTQPGL*QSVSGR
Trigger: CCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGT...ACCATTAAGTCGGGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATATTGCGTCATCACCCTCTTTCCAGTTCCAGCTGGGGATGTTGAGCAGATGGGTAGCGGGCAAACATTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: HIASSPSFQFQLGMLSRWVAGKH*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCAATGTTTGCCCGCTAC...CCATCTGCTCAACATCCCCAGCTGGAACTGGAAAGAGGGTGATGACGCAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp CTTAGCGAGTTCCGTGATGATGGGAATGTTGACCCCAGTTGTGATGGACGGCTGAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: LSEFRDDGNVDPSCDGRLRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...CAGCCGTCCATCACAACTGGGGTCAACATTCCCATCATCACGGAACTCGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGCTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GITRFRRPIRAELTSPKMLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp CTTAGCGAGTTCCGTGATGATGGGAATGTTGACCCCAGTTGTGATGGACGGCTGTTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: LSEFRDDGNVDPSCDGRLFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...CAGCCGTCCATCACAACTGGGGTCAACATTCCCATCATCACGGAACTCGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDSADLL*TGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCATTCAACTTCTCTGATTaGAGGGATCAGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPFNFSD*RDQAAC
Trigger: ACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGC +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADAHHMR*PRLSHG
Trigger: GCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGC...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIVLPPQ*QQTVHR
Trigger: CCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGAC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGGATTGGTGATGACGTACCTCCATTGTTTATCTTCTaGGCCTCCTTCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: QVCWYELKLVGRIGDDVPPLFIF*ASFVLP
Trigger: GGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGG...AGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 72 bp CCTCCTGTCACCAGGGTCCGTATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCGCTCATGAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PPVTRVRIRVRI*SLKYVALMSES
Trigger: GGACTCACTCATGAGCGCGACATACTTCAATGACAATATCCTCACCCTAATACGGACCCTGGTGACAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 72 bp GAGGCATCTTCTGCATCCGGGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCATCTGCTGACTCTATC +
Preference number: 4 (lower is better)
Translates to: EASSASGSAQYL*ARIRHASADSI
Trigger: GATAGAGTCAGCAGATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGACCCGGATGCAGAAGATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp CACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGCTACGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: HHNNHHPLSLQRDHLTGLRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...TAGCCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKEEWEE*DRLARD
Trigger: ATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIEEWEE*DRLARD
Trigger: ATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCCAGCCGACCTCGGCTaGCACCACCTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIPADLG*HHLLFF
Trigger: GAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp TGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTTTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: WTGWSGRRSSSYWTTVRSFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...ACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GATGATCTGTCCATTCCAGGAGGTGTGAATCCTTGGGAATTAGCCTGCAAGACCTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DDLSIPGGVNPWELACKTSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCTGGAATGGACAGATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR GCA 90 bp GCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGATGACTTTCTCAATGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: ATQDSHGSFTSSQDDFLNVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...ATTGAGAAAGTCATCTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGCACACGGCCTGACATaGACGAGCAGTCACGCTCAG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLAHGLT*TSSHAQ
Trigger: CTGAGCGTGACTGCTCGTGCATGTCAGGCCGTGTGC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYRKPTT*VGPGCR
Trigger: GCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTRKPTT*VGPGCR
Trigger: GCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCT...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR GCA 90 bp AGTGAAACATTCCAGTGGAGTCGTACTTTTTCACATTGGAGTCCATGTTGTCAAAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SETFQWSRTFSHWSPCCQRKPTT*VGPGCR
Trigger: GCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCT...TTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATGGGCCTCCTTCGTCTTaGCCCCGCAGTGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYGPPSS*PRSGSK
Trigger: TTTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCC...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp ACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: TASGRRSGLLVRAQTRRERVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...CTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp ACTGCATCAGGCAGAAGATCAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: TASGRRSGLLVRAQTRRERGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...CTCCCTACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCTGCCTGATGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCATGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: IAGESNFKIQLLKRRQTACRGTP*TWAGSA
Trigger: GGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKCRGTP*TWAGSA
Trigger: GGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTCCATCTTGGGCTCGTaGACCGAGGACGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDSILGS*TEDEEE
Trigger: TTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGA...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTCCATCTTGGGCTCGTaGACCGAGGACGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIISILGS*TEDEEE
Trigger: TTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTVLPPQ*QQTVHR
Trigger: CCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGAC...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
3UTR CAA 72 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTaGCCTACATTGGTAATTGGAGTCCTTAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: GSAGSGQRWKLI*PTLVIGVLSGH
Trigger: ATGTCCACTAAGGACTCCAATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGCAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILEEWEE*DRLARD
Trigger: ATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGCTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRLTGRL*GVGGMR
Trigger: TCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAG...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAACCACGCACACGGCCTaGCATGCACGAGCAGTCACG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALTTHTA*HARAVT
Trigger: CGTGACTGCTCGTGCATGTCAGGCCGTGTGCGTGGT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGGTCCACAGGTACTTaGGCGTCCGCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRSTGT*ASARAR
Trigger: TCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCG...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCCGGTCCACAGGTACTTaGGCGTCCGCCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTRSTGT*ASARAR
Trigger: TCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCG...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR GCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACCAGCCGACCTCGGCTaGCACCACCTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQPADLG*HHLLFF
Trigger: GAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAACACAACCAGGACTCTaGCAGTCAGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLTQPGL*QSVSGR
Trigger: CCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGTCCATGTTGTCAATCTGATCATTGCCAGGAATTAACAAGGGGTCATGCCTCACTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: SPCCQSDHCQELTRGHASLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...TGAGGCATGACCCCTTGTTAATTCCTGGCAATGATCAGATTGACAACATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp GGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATGAGACACAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: GRRSSSYWTTVRSGRNETQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...TGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCACTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp ATGGACACTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTTGAGGTACTCAGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: MDTFGKLCSVSHSLLRYSDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...TGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYSADLL*TGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQVLPPQ*QQTVHR
Trigger: CCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGAC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GGCAAGATCATGTGGATTGAGGACAGAGCCCTGATAAAACTCCACCTGAGTGAACCATTGTTTATCTTCTaGGCCTCCTTCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GKIMWIEDRALIKLHLSEPLFIF*ASFVLP
Trigger: GGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGG...TTCACTCAGGTGGAGTTTTATCAGGGCTCTGTCCTCAATCCACATGATCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 72 bp ACTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCCACAAACACAATGTGT +
Preference number: 4 (lower is better)
Translates to: TFGKLCSVSHSL*RYSMEPTNTMC
Trigger: ACACATTGTGTTTGTGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 72 bp AATGGTGTACCAGGCAATATGGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCCCTCTTGAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: NGVPGNMDTFGK*CSVSHSLLRYS
Trigger: TGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTCCATATTGCCTGGTACACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFRPLA*EYHLPG
Trigger: GCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATGTCGCGCTCATGAGTaGGTCCAGGACGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKCRAHE*VQDADG
Trigger: GCCGTCAGCGTCCTGGACTCACTCATGAGCGCGACA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALEEWEE*DRLARD
Trigger: ATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVEEWEE*DRLARD
Trigger: ATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATCTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDLTGRL*GVGGMR
Trigger: TCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAG...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAACCACGCACACGGCCTaGCATGCACGAGCAGTCACG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRTTHTA*HARAVT
Trigger: CGTGACTGCTCGTGCATGTCAGGCCGTGTGCGTGGT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCAGGACGCGTCTAGGCTaGGATGGTTCGCGTGGATAT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIRTRLG*DGSRGY
Trigger: ATATCCACGCGAACCATCTCAGCCTAGACGCGTCCT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATACACAACCAGGACTCTaGCAGTCAGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYTQPGL*QSVSGR
Trigger: CCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AGTCAAGATGACTTTCTCAATCTCCTTGGGTGCACACCAGTGAAACATTCCAGTGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SQDDFLNLLGCTPVKHSSVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...ACTGGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAGTCATCTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp CAGGTCTGTTGGTACGAGCTCAAACTCGTAGGGAGGATTGGTGATGACGTACCTTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: QVCWYELKLVGRIGDDVPSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...AGGTACGTCATCACCAATCCTCCCTACGAGTTTGAGCTCGTACCAACAGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp GTAAACCATTTCTTTTCTGTTCTGTTTGTCGCGGGACTCCCTGGACTTGGGCCGAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: VNHFFSVLFVAGLPGLGPSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...CGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGAAATGGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCGGAGTGCAGCCCTGGTaGTACAGATTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTGVQPW*YRLELL
Trigger: CAGCAGCTCCAATCTGTAGCACCAGGGCTGCACTCC...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCTTCGGGGAGGTGTTaGGCGAGTTCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLASGRC*ASSSCP
Trigger: GGGGCATGAGGAACTCGCCCAACACCTCCCCGAAGC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATAATGGCACTTTTGAATGTAAGCAGCAAAGACATTGTGCTAACGTGGGCACAGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HNGTFECKQQRHCANVGTVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...TGTGCCCACGTTAGCACAATGTCTTTGCTGCTTACATTCAAAAGTGCCATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSADLL*TGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSGTPWT*AGSADL
Trigger: CAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTTCAACTTCTCTGATTaGAGGGATCAGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGFNFSD*RDQAAC
Trigger: ACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATCATTCTCTTGTAGATaGACATCTTGGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGSFSCR*TSWAAC
Trigger: GCAGGCGGCCCAAGATGTCCATCTACAAGAGAATGA...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTCCTTACAGTCTGCCTCATTACTTCACTATTTCAGATCCCCTGTATCTCAACCGCGTCTAGGCTGAGATaGTTCGCGTGGATATTGCTG +
Preference number: 4 (lower is better)
Translates to: VLTVCLITSLFQIPCISTASRLR*FAWILL
Trigger: CAGCAATATCCACGCGAACCATCTCAGCCTAGACGC...GGTTGAGATACAGGGGATCTGAAATAGTGAAGTAATGAGGCAGACTGTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCTCCATCTTGGGCTCGTaGACCGAGGACGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTSILGS*TEDEEE
Trigger: TTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGA...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCGAAGAAAGTCACCATaGAGGAGGCCAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIRRKSP*RRPRKP
Trigger: GGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGAAGAAAGTCACCATaGAGGAGGCCAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIRRKSP*RRPRKP
Trigger: GGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCG...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATGTGTTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTGCCCATTGTTTATCTTCTaGGCCTCCTTCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HVLCVYISIEDSKQQDRCPLFIF*ASFVLP
Trigger: GGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGG...GCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILFRPLA*EYHLPG
Trigger: GCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GACTTTCTAAATCAATGCTCTGATTTCAATGTGGCTCTTCAACCATCCACTTCCTCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: DFLNQCSDFNVALQPSTSSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...GGAAGTGGATGGTTGAAGAGCCACATTGAAATCAGAGCATTGATTTAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGCAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGTGAGTCCAGGACGCTaGCGGCAAATGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLVSPGR*RQMLSH
Trigger: GTGGGACAGCATTTGCCGTCAGCGTCCTGGACTCAC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGAGGAGTGGGAGGAATaGGACAGACTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLEEWEE*DRLARD
Trigger: ATCCCGGGCCAGTCTGTCTCATTCCTCCCACTCCTC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAGGACGCGTCTAGGCTaGGATGGTTCGCGTGGATAT +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRTRLG*DGSRGY
Trigger: ATATCCACGCGAACCATCTCAGCCTAGACGCGTCCT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCAGGACGCGTCTAGGCTaGGATGGTTCGCGTGGATAT +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTRTRLG*DGSRGY
Trigger: ATATCCACGCGAACCATCTCAGCCTAGACGCGTCCT...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCCAGCCGACCTCGGCTaGCACCACCTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLPADLG*HHLLFF
Trigger: GAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CACATGTCACAGAGGTTGATGTTGACAGCCCTTAAATCAGCCCGACTTAATGGTCCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: HMSQRLMLTALKSARLNGPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...ACCATTAAGTCGGGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGISSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CATGTGTTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTGCCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: HVLCVYISIEDSKQQDRCLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...GCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGACTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGCCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTTGTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: TLFTRQESYHWLLQMTELWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...CAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDALWSN*IRQKIR
Trigger: CCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIALWSN*IRQKIR
Trigger: CCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGGGCCTCCTTCGTCTTaGCCCCGCAGTGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKGPPSS*PRSGSK
Trigger: TTTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIISGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRSADLL*TGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCGGCCGATTTGCTGTaGACGGGATGGAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSADLL*TGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGCGTCTAGGCTGAGATaGTTCGCGTGGATATTGCTG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLASRLR*FAWILL
Trigger: CAGCAATATCCACGCGAACCATCTCAGCCTAGACGC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCCATTGTTTATCTTCTaGGCCTCCTTCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIPLFIF*ASFVLP
Trigger: GGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
3UTR CAA 72 bp GGTGTGCCTATAACCCTTCCCCATATCCTGAGCTGGTaGCTTAAACCTGATCTGGCAACTGCAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: GVPITLPHILSW*LKPDLATAEML
Trigger: TAACATTTCTGCAGTTGCCAGATCAGGTTTAAGCAACCAGCTCAGGATATGGGGAAGGGTTATAGGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CAA 72 bp ATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTaGATCTGGTTAGCCATGTGGGTACTCATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: IGGIRLLVDLYW*IWLAMWVLMGL
Trigger: CAAGCCCATGAGTACCCACATGGCTAACCAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
3UTR CAA 72 bp TCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATaGGTTGATCTGGTTAGCCATGTGGGTACTCATGGG +
Preference number: 4 (lower is better)
Translates to: SDWRDQAACGFI*VDLVSHVGTHG
Trigger: CCCATGAGTACCCACATGGCTAACCAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
3UTR CAA 72 bp CTCATCAGTGGTGGAGGTGAGGCTGAAGGTAAACCTTaGCATCTCCACTCTAAGAGCTTTCAAACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LISGGGEAEGKP*HLHSKSFQTGE
Trigger: TTCTCCAGTTTGAAAGCTCTTAGAGTGGAGATGCAAAGGTTTACCTTCAGCCTCACCTCCACCACTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp GCTGACAGGATAACGCACATGTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCCCGACTTAATGGTGTA +
Preference number: 4 (lower is better)
Translates to: ADRITHMSQRLM*TALKSARLNGV
Trigger: TACACCATTAAGTCGGGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGACATGTGCGTTATCCTGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 72 bp TGCAAGACCCCGATGCTGTCATCAAACTGCATAGATTaGATGTTGAGTGACGCCAAGATGCATTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CKTPMLSSNCID*MLSDAKMHSLS
Trigger: GGACAAGGAATGCATCTTGGCGTCACTCAACATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
3UTR CAA 72 bp AGAAAGACAATCTCCACGTTGACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGGAAGTTAGAGACACTC +
Preference number: 4 (lower is better)
Translates to: RKTISTLTSSRS*CRKSFRKLETL
Trigger: GAGTGTCTCTAACTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGATGTCAACGTGGAGATTGTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
3UTR CAA 72 bp GAGGTACAGCTCTGTGTCAGGGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATTGGTATCATTCACGAG +
Preference number: 4 (lower is better)
Translates to: EVQLCVRVIVIV*VQKLNIGIIHE
Trigger: CTCGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACACAGAGCTGTACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQFRPLA*EYHLPG
Trigger: GCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVFRPLA*EYHLPG
Trigger: GCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGCAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTGGCATCACTTGCGATaGAAAATCCTAAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGWHHLR*KILKYL
Trigger: AAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLALGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLALTGRL*GVGGMR
Trigger: TCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGGACGCGTCTAGGCTaGGATGGTTCGCGTGGATAT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALRTRLG*DGSRGY
Trigger: ATATCCACGCGAACCATCTCAGCCTAGACGCGTCCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAACACAACCAGGACTCTaGCAGTCAGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRTQPGL*QSVSGR
Trigger: CCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTCCTTACAGTCTGCCTCATTACTTCACTATTTCAGATCCCCTGTATCTCAACCACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: VLTVCLITSLFQIPCISTTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...GGTTGAGATACAGGGGATCTGAAATAGTGAAGTAATGAGGCAGACTGTAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGILNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLITFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGCCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATGGCGTAACATCCCGTaGACTGGGCTGTTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRWRNIP*TGLLSG
Trigger: ACCCGACAACAGCCCAGTGCACGGGATGTTACGCCA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGACGCTGACGGCAAATaGTGTCCCACAAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVDADGK*CPTSKG
Trigger: CCCTTTGCTTGTGGGACAGCATTTGCCGTCAGCGTC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKALWSN*IRQKIR
Trigger: CCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCCGGTTCGGCCGATTTaGTGTGGACGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKPVRPI*CGRDGV
Trigger: CACTCCATCCCGTCCACAGCAAATCGGCCGAACCGG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGCACACGGCCTGACATaGACGAGCAGTCACGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKAHGLT*TSSHAQ
Trigger: CTGAGCGTGACTGCTCGTGCATGTCAGGCCGTGTGC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCCAAAAACTGAACATTaGTATCATTCACGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGPKTEH*YHSRVP
Trigger: CGGAACTCGTGAATGATACCAATGTTCAGTTTTTGG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065788.15
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIREDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGCGTCTAGGCTGAGATaGTTCGCGTGGATATTGCTG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAASRLR*FAWILL
Trigger: CAGCAATATCCACGCGAACCATCTCAGCCTAGACGC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCGCGTCTAGGCTGAGATaGTTCGCGTGGATATTGCTG +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTASRLR*FAWILL
Trigger: CAGCAATATCCACGCGAACCATCTCAGCCTAGACGC...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CCA 90 bp TTTCTCTATTTTAAGCCCTCCTTTCTGTTTCCCACTCTCCCAATACTAAAAAGATCCATCTTGGGCTCGTaGACCGAGGACGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FLYFKPSFLFPTLPILKRSILGS*TEDEEE
Trigger: TTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGA...TCTTTTTAGTATTGGGAGAGTGGGAAACAGAAAGGAGGGCTTAAAATAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCCGAAGAAAGTCACCATaGAGGAGGCCAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTRRKSP*RRPRKP
Trigger: GGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCG...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACCATTGTTTATCTTCTaGGCCTCCTTCGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLPLFIF*ASFVLP
Trigger: GGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCCAAAAACTGAACATTaGTATCATTCACCAACTCCG +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGPKTEH*YHSPTP
Trigger: CGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCTTAGGAGTGCAGCCCTaGTGCTACAGATTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTLGVQP*CYRLEL
Trigger: CAGCTCCAATCTGTAGCACCAGGGCTGCACTCCTAA...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
3UTR CAA 72 bp GGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATaGGTAATTGGAGTCCTTAGTGGACATGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: GSGQRWKLILPT*VIGVLSGHVSI
Trigger: TATGGAAACATGTCCACTAAGGACTCCAATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp GAGGTACAGCTCTGTGTCAGGGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATTGGTATCATTCACCAA +
Preference number: 4 (lower is better)
Translates to: EVQLCVRVIVIV*VQKLNIGIIHQ
Trigger: TTGGTGAATGATACCAATGTTCAGTTTTTGGACCAAGACGATGACGATGACCCTGACACAGAGCTGTACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR TCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADFRPLA*EYHLPG
Trigger: GCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAA...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLARGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATCTCCACCAAGTGGATaGATCCAGCTGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKSPPSG*IQLQSA
Trigger: GGCTGACTGCAGCTGGATTCATCCACTTGGTGGAGA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTTGGGTGCACACCAGTaGAACATTCCAGTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVLGAHQ*NIPVES
Trigger: CGACTCCACTGGAATGTTTCACTGGTGTGCACCCAA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATGAGGCCAATCAGGGCTaGGCTGACATCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADEANQG*ADIPKD
Trigger: ATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTC...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALLTGRL*GVGGMR
Trigger: TCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGCCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GACTTTCTAAATCAATGCTCTGATTTCAATGTGGCTCTTCAACCATCCACTTCCTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DFLNQCSDFNVALQPSTSSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...GGAAGTGGATGGTTGAAGAGCCACATTGAAATCAGAGCATTGATTTAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCGCTACAGATTGGAGCTaGTGGCTGTATTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTATDWS*WLYLWG
Trigger: TCCCCACAAATACAGCCAGCAGCTCCAATCTGTAGC...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTACCATCTGCCTGGCTaGAGCCATTGTTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIYHLPG*SHCLSS
Trigger: AGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLLPVSV*ADIITP
Trigger: AGGGGTGATGATATCCGCCCAGACACTGACTGGCAG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTTTCAGGGACGTAGCTaGCAAACATGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSFQGRS*QTWPVP
Trigger: GGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLASGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGILSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTCTATTTTAAGCCCTCCTTTCTGTTTCCCACTCTCCCAATACTAAAAAGAGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: FLYFKPSFLFPTLPILKRVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...TCTTTTTAGTATTGGGAGAGTGGGAAACAGAAAGGAGGGCTTAAAATAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGTTGTGATGGACGGCTaGCGTAACATCCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRVVMDG*RNIPCT
Trigger: AGTGCACGGGATGTTACGCCAGCCGTCCATCACAAC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGACTGGCCCGGGATTaGCCAGCGTTGTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKRLARD*PALWSN
Trigger: GTTTGACCACAACGCTGGCCAATCCCGGGCCAGTCT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCTTGTGGATTTATATTaGTTGATCTGGTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: SREKNIADSPTVHMTCMGLVDLY*LIWLAM
Trigger: CATGGCTAACCAGATCAACCAATATAAATCCACAAG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTCATTCTCTTGTAGATaGACATCTTGGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDSFSCR*TSWAAC
Trigger: GCAGGCGGCCCAAGATGTCCATCTACAAGAGAATGA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCCCTGGTGCTACAGATTaGAGCTGCTGGCTGTATTTG +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTPGATD*SCWLYL
Trigger: CAAATACAGCCAGCAGCTCCAATCTGTAGCACCAGG...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
3UTR CAA 72 bp TTTATTGGATGCATGTTCTACATAACATGTCTCCTGTaGCCAAGAAGGGACACAAGCTGTCCAGCAACAGGT +
Preference number: 4 (lower is better)
Translates to: FIGCMFYITCLL*PRRDTSCPATG
Trigger: ACCTGTTGCTGGACAGCTTGTGTCCCTTCTTGGCAACAGGAGACATGTTATGTAGAACATGCATCCAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTTCCCATGGGTCCCCTaGATTCTCCACCAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLFPWVP*ILHQVD
Trigger: ATCCACTTGGTGGAGAATTCAGGGGACCCATGGGAA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCAGGCATGCATCTGCTaGCTCTATCTTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLQACIC*LYLDSG
Trigger: GCCAGAGTCAAGATAGAGTCAGCAGATGCATGCCTG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TGGGAATTAGCCTGCAAGACCCCGATGCTGTCATCAAACTGCATAGATTTGATGTGGCATCACTTGCGATaGAAAATCCTAAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: WELACKTPMLSSNCIDLMWHHLR*KILKYL
Trigger: AAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCA...CATCAAATCTATGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCAATCAGGGCTGAGCTaGCATCCCCAAAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLQSGLS*HPQRCR
Trigger: TCTGCATCTTTGGGGATGTCAGCTCAGCCCTGATTG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATTTCCCACTCCCTCTTaGGGTACTCAATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKFPTPS*GTQWSP
Trigger: TGGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTAAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGAAGCAAAGGGCTGTGTaGGGTACAGCTCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLKQRAV*GTALCQ
Trigger: CTGACACAGAGCTGTACCTCACACAGCCCTTTGCTT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACTTACTGGACGACTGTaGGGAGTGGGAGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKLTGRL*GVGGMR
Trigger: TCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGGGCATCTCTCAGCCGGTAAATTCCAAAACAAAGCATATTATATGTTTTCAGGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: VGISQPVNSKTKHIICFQGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...CTGAAAACATATAATATGCTTTGTTTTGGAATTTACCGGCTGAGAGATGCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR GCA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAATTAACAAGGGGTCATaGCTCATCAGCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALINKGS*LISFGE
Trigger: CTCCCCGAAGCTGATGAGGCATGACCCCTTGTTAAT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCCTTGGGAATTAGCCTaGAAGACCCCGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADPWELA*KTPMLS
Trigger: TGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLARGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGATTGGCAAGCATTGTaGAGAGGCCTTGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLDWQAL*RGLEPD
Trigger: GTCTGGCTCAAGGCCTCTCCACAATGCTTGCCAATC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLADPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGTTGCTAGCACGAAGTaGCATCACCAGGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKVASTK*HHQVPE
Trigger: CTCCGGAACCTGGTGATGCCACTTCGTGCTAGCAAC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTACCTTTTTGTACACTaGCTGGGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSYLFVH*LGVLRW
Trigger: CCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGATTGGCCAGCGTTGTaGTCAAACTGCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKDWPAL*SNCIRQ
Trigger: CTGCCTGATGCAGTTTGACCACAACGCTGGCCAATC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGTGGACGGGATGGAGTaGACGGAGGAGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKVDGME*TEELFL
Trigger: TAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCAC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAACGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDNGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGTT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074983.13
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACTGAGATGGTTCGCGTaGATATTGCTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLLRWFA*ILLLIL
Trigger: TAGAATGAGCAGCAATATCCACGCGAACCATCTCAG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTTCTCTATTTTAAGCCCTCCTTTCTGTTTCCCACTCTCCCAATACTAAAAAGACGAAGAAAGTCACCATaGAGGAGGCCAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: FLYFKPSFLFPTLPILKRRRKSP*RRPRKP
Trigger: GGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCG...TCTTTTTAGTATTGGGAGAGTGGGAAACAGAAAGGAGGGCTTAAAATAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp ATGTTATTTCTGTTTCAACTGAGTTGCCATAAGCTTTaGCCAGATGGGGCCACCACATGGTCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: MLFLFQLSCHKL*PDGATTWSFSG
Trigger: TCCAGAAAATGACCATGTGGTGGCCCCATCTGGCAAAAGCTTATGGCAACTCAGTTGAAACAGAAATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp ATCACAGGATCTCAAGTTGCTGAGAGATGGTTCAACTaGAGAGCCTATGTTTCTGTGATGCTTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ITGSQVAERWFN*RAYVSVMLSRK
Trigger: CTTTCTGGAAAGCATCACAGAAACATAGGCTCTCAAGTTGAACCATCTCTCAGCAACTTGAGATCCTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp GGGTTAATTAATATTCGGCTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATCAGGAGCTTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLINIRLSLLAD*YSMAIIRSLSF
Trigger: GAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAATATTAATTAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCCGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACGAGGGCACCAATGCTaGGAGCAAAGACTAACACAA +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKRGHQC*EQRLTQ
Trigger: TTGTGTTAGTCTTTGCTCTCAGCATTGGTGCCCTCG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAGACAATCTCCACGTTaGCATCATCCCGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSRQSPR*HHPGPC
Trigger: ACAAGGACCGGGATGATGTCAACGTGGAGATTGTCT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTTCTTTTGGGATCTGTaGCGTCATCATGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVFFWDL*RHHDRP
Trigger: AGGCCTGTCATGATGACGTCACAGATCCCAAAAGAA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIISMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGISMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGACAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGGATATCATCACCCCTaGCCAGTCCTTCACAGATGT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKGYHHP*PVLHRC
Trigger: ACATCTGTGAAGGACTGGGCAGGGGTGATGATATCC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGTGGATGAATCCAGCTaGAGTCAGCCACGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKVDESS*SQPRAD
Trigger: ATCAGCACGTGGCTGACTGCAGCTGGATTCATCCAC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLISKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLISPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGTTGGAGGCATCTTCTaGATCCGGGTCAGCGCAATA +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKVGGIF*IRVSAI
Trigger: TATTGCGCTGACCCGGATGCAGAAGATGCCTCCAAC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGICQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLALWSN*IRQKIR
Trigger: CCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGCGTTGTGGTCAAACTaGATCAGGCAGAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRALWSN*IRQKIR
Trigger: CCTGATCTTCTGCCTGATGCAGTTTGACCACAACGC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGACAGGGTTGGCGGCTaGTCATCTTCAACATGTAAA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRDRVGG*SSSTCK
Trigger: TTTACATGTTGAAGATGAGCAGCCGCCAACCCTGTC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112423.10
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATACCATCTGCCTGGCTaGAGCCATTGTTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQYHLPG*SHCLSS
Trigger: AGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTACCATCTGCCTGGCTaGAGCCATTGTTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYYHLPG*SHCLSS
Trigger: AGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRSGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCATCTGGCAAGATCATGTaGATTGAGGACAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IAGESNFKIQLLKRRQTASGKIM*IEDRAL
Trigger: CAGGGCTCTGTCCTCAATCCACATGATCTTGCCAGA...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp GACTTTCTAAATCAATGCTCTGATTTCAATGTGGCTCTTCAACCATCCACTTCCCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: DFLNQCSDFNVALQPSTSQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...GGAAGTGGATGGTTGAAGAGCCACATTGAAATCAGAGCATTGATTTAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLALSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILLSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACACTCAGGACAGTCATaGCAGCTTCACTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRHSGQS*QLHFES
Trigger: TGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGATGCAGACTACGACATaGCCACTCAGGACAGTCATG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLMQTTT*PLRTVM
Trigger: CATGACTGTCCTGAGTGGCCATGTCGTAGTCTGCAT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGGAGGTGTGAATCCTTaGGAATTAGCCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKGGVNP*ELACKT
Trigger: GGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATCCAAAAACTGAACATTaGTATCATTCACGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDPKTEH*YHSRVP
Trigger: CGGAACTCGTGAATGATACCAATGTTCAGTTTTTGG...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCCAAAAACTGAACATTaGTATCATTCACGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIPKTEH*YHSRVP
Trigger: CGGAACTCGTGAATGATACCAATGTTCAGTTTTTGG...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAGCTCTTCTTACTaGACGACTGTGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKRSSSY*TTVRSG
Trigger: CCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCATCTGGTTAGCCATGTaGGTACTCATGGGCTTGATT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAIWLAM*VLMGLI
Trigger: AATCAAGCCCATGAGTACCCACATGGCTAACCAGAT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCCTGAGATGGTTCGCGTaGATATTGCTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTLRWFA*ILLLIL
Trigger: TAGAATGAGCAGCAATATCCACGCGAACCATCTCAG...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
3UTR CAA 72 bp CAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTaGGGTAGGTCATTTCAGAGCACCAGCATTTATTCT +
Preference number: 4 (lower is better)
Translates to: QESYHWLLQMTE*GRSFQSTSIYS
Trigger: AGAATAAATGCTGGTGCTCTGAAATGACCTACCCAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLATQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGTGAAACATTCCAGTGGAGTCGTACTTTTTCACATTGGAGTCCATGTTGTCAAACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: SETFQWSRTFSHWSPCCQTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...TTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGCATCACTTGCGATaGAAAATCCTAAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIWHHLR*KILKYL
Trigger: AAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIISSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GGAGAATATAGAAATGAACCTGACTGTTCTTTGTCCAGAGCAGAGAGTGGATGCTCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: GEYRNEPDCSLSRAESGCSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...GCATCCACTCTCTGCTCTGGACAAAGAACAGTCAGGTTCATTTCTATATTCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGGTACTCATGGGCTTaGTTTGAATGTTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQGYSWA*FECFWD
Trigger: ATCCCAGAAACATTCAAATCAAGCCCATGAGTACCC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGGGTACTCATGGGCTTaGTTTGAATGTTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRGYSWA*FECFWD
Trigger: ATCCCAGAAACATTCAAATCAAGCCCATGAGTACCC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTCATCCCGGTCCTTGTaGAGAAAGTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKSSRSL*RKSFRK
Trigger: CTTCCTGAAGGACTTTCTGCACAAGGACCGGGATGA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCACCCAACTTGAGCTCTaGAAGGCATATTGCGTCATC +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSTQLEL*KAYCVI
Trigger: GATGACGCAATATGCCTTGCAGAGCTCAAGTTGGGT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACTCAATCTCCTTGGGTaGACACCAGTGAAACATTCC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKLNLLG*TPVKHS
Trigger: GGAATGTTTCACTGGTGTGCACCCAAGGAGATTGAG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CCAATACTAAAAAGATATTCTGTCCTAATCATATCAGCTTGGTTTGCTCCATTGACTTTCGGGAAGTTGTaGAGTGTTTCCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: PILKRYSVLIISAWFAPLTFGKL*SVSHSL
Trigger: GAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGT...CAATGGAGCAAACCAAGCTGATATGATTAGGACAGAATATCTTTTTAGTATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIAIKTT*SSHSLV
Trigger: TACAAGAGAATGAGACGAGCATGTTGTTTTGATTGC...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTACCATCTGCCTGGCTaGAGCCATTGTTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQYHLPG*SHCLSS
Trigger: AGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKRVPSA*LEPLFI
Trigger: GATAAACAATGGCTCCAGCCAGGCAGATGGTACTCT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATAGAGGCGTCCAAGTGTaGTTTTTGCATAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADRGVQV*FLHKRP
Trigger: GGGACGTTTATGCAAAAACCACACTTGGACGCCTCT...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATAATGGCACTTTTGAATGTAAGCAGCAAAGACATTGTGCTAACGTGGGCACACTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: HNGTFECKQQRHCANVGTLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...TGTGCCCACGTTAGCACAATGTCTTTGCTGCTTACATTCAAAAGTGCCATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLILCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCAGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: IAGESNFKIQLLKRRQTADPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGACCCACGAAGGCACTaGAGAGATATTCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLDPRRH*RDILCT
Trigger: TGTACACAGAATATCTCTCCAGTGCCTTCGTGGGTC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGISWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDSETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQLSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGCCAAAAACTGAACATTaGTATCATTCACGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKPKTEH*YHSRVP
Trigger: CGGAACTCGTGAATGATACCAATGTTCAGTTTTTGG...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVREDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCATCTGGTTAGCCATGTaGGTACTCATGGGCTTGATT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVIWLAM*VLMGLI
Trigger: AATCAAGCCCATGAGTACCCACATGGCTAACCAGAT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGATCTGGTTAGCCATGTaGGTACTCATGGGCTTGATT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQIWLAM*VLMGLI
Trigger: AATCAAGCCCATGAGTACCCACATGGCTAACCAGAT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCTGAGATGGTTCGCGTaGATATTGCTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVLRWFA*ILLLIL
Trigger: TAGAATGAGCAGCAATATCCACGCGAACCATCTCAG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTGAGATGGTTCGCGTaGATATTGCTGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRLRWFA*ILLLIL
Trigger: TAGAATGAGCAGCAATATCCACGCGAACCATCTCAG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCACAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: IAGESNFKIQLLKRRQTAQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCAAGATCATGTGGATTaGGGACAGAGCCCTGATAAA +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLQDHVD*GQSPDK
Trigger: TTTATCAGGGCTCTGTCCTCAATCCACATGATCTTG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTGGCATCACTTGCGATaGAAAATCCTAAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDWHHLR*KILKYL
Trigger: AAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLASMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR TCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGGGTACTCATGGGCTTaGTTTGAATGTTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKGYSWA*FECFWD
Trigger: ATCCCAGAAACATTCAAATCAAGCCCATGAGTACCC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGCCCCCGTATTTCTTaGGGTTTCCTATTAACTCTA +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSPRIS*GFLLTL
Trigger: TAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCCACAGACTACAATGTaGTTTCTTCCACTAACCGCG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKPQTTM*FLPLTA
Trigger: CGCGGTTAGTGGAAGAAAGCACATTGTAGTCTGTGG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTGGAGGGATCAGGCTaGTTGTGGATTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRLEGSG*LWIYIG
Trigger: ACCAATATAAATCCACAAGCAGCCTGATCCCTCCAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTTGGAGGGATCAGGCTaGTTGTGGATTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQLEGSG*LWIYIG
Trigger: ACCAATATAAATCCACAAGCAGCCTGATCCCTCCAA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKAIKTT*SSHSLV
Trigger: TACAAGAGAATGAGACGAGCATGTTGTTTTGATTGC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATACCATCTGCCTGGCTaGAGCCATTGTTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKYHLPG*SHCLSS
Trigger: AGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCCAGCGCAATACTTATTaGCAAGGATCAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSQRNTY*QGSGMH
Trigger: ATGCATGCCTGATCCTTGCCAATAAGTATTGCGCTG...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTTCGGCTCTCTCTGTTaGCAGACTTGTACTCAATGG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKFGSLC*QTCTQW
Trigger: CCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: NFSDWRDQAACGFILVDLSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: STSLIGGIRLLVDLYWLISETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLLSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATCCAAAAACTGAACATTaGTATCATTCACGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYPKTEH*YHSRVP
Trigger: CGGAACTCGTGAATGATACCAATGTTCAGTTTTTGG...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGAAGATCAGGTCTGTTaGTACGAGCTCAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLEDQVC*YELKLV
Trigger: TACGAGTTTGAGCTCGTACCAACAGACCTGATCTTC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCATCTGGTTAGCCATGTaGGTACTCATGGGCTTGATT +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSIWLAM*VLMGLI
Trigger: AATCAAGCCCATGAGTACCCACATGGCTAACCAGAT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTTATATTGGTTGATCTaGTTAGCCATGTGGGTACTC +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLALYWLI*LAMWVL
Trigger: GAGTACCCACATGGCTAACCAGATCAACCAATATAA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATTTCAACTTCTCTGATTaGAGGGATCAGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADFNFSD*RDQAAC
Trigger: ACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CAA 72 bp CAAACCCTTTTTACAAGACAAGAGAGTTATCACTGGTaGTTACAGATGACAGAGTTGGGTAGGTCATTTCAG +
Preference number: 4 (lower is better)
Translates to: QTLFTRQESYHW*LQMTELGRSFQ
Trigger: CTGAAATGACCTACCCAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGACACAGGAGGGACTGTaGAGAAATCTACTACTGAAT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLTQEGL*RNLLLN
Trigger: ATTCAGTAGTAGATTTCTTCACAGTCCCTCCTGTGT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKFLLTL*FQGRSW
Trigger: CCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTTAGGGGAGATGTTGTaGAGAAAGACAATCTCCACG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKLGEML*RKTIST
Trigger: CGTGGAGATTGTCTTTCTTCACAACATCTCCCCTAA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRSMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLAQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGATTATTCTGATTGGCTaGCAGGATAACGCACATGTC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLIILIG*QDNAHV
Trigger: GACATGTGCGTTATCCTGTCAGCCAATCAGAATAAT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLASSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCATCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: IAGESNFKIQLLKRRQTASKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSKCGF*INVPIT
Trigger: GGTTATGGGGACGTTTATGCAAAAACCACACTTGGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: FIFNFSDWRDQAACGFILMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTTGGAGGGATCAGGCTaGTTGTGGATTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLLEGSG*LWIYIG
Trigger: ACCAATATAAATCCACAAGCAGCCTGATCCCTCCAA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CCA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: SPQRKREKEEKCASRNLASETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCTTTCTCAATCTCCTTaGGTGCACACCAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKLSQSP*VHTSET
Trigger: TGTTTCACTGGTGTGCACCCAAGGAGATTGAGAAAG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAAACCATTTCTTTTCTTaGCCCATTCTAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQNHFFS*PILVIL
Trigger: AAGGATGACTAGAATGGGCCAAGAAAAGAAATGGTT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTTCAACTTCTCTGATTaGAGGGATCAGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKFNFSD*RDQAAC
Trigger: ACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACATTTCTTTTCTGCTTaGCCCATTCTAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALHFFSA*PILVIL
Trigger: AAGGATGACTAGAATGGGCCAAGCAGAAAAGAAATG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112423.10
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCCAAAAACTGAACATTaGTATCATTCACCAACTCCG +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQPKTEH*YHSPTP
Trigger: CGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTGGCATCACTTGCGATaGAAAATCCTAAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLWHHLR*KILKYL
Trigger: AAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADSMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTTCCCAGTACGTAAGTaGCTGGTTGTTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLFPVRK*LVVLEI
Trigger: AATTTCCAAAACAACCAGGCACTTACGTACTGGGAA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTGTCAATCTGATCATTaGCAGGAATTAACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSCQSDH*QELTRG
Trigger: ACCCCTTGTTAATTCCTGGCAATGATCAGATTGACA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR GCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAAACCATTTCTTTTCTaGTTGGCCCATTCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRKPFLF*LAHSSH
Trigger: ATGACTAGAATGGGCCAAGCAGAAAAGAAATGGTTT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112423.10
CDS-3UTR CCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTACAGTACGTAAGTGCCTaGTTGTTTTGGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLQYVSA*LFWKFS
Trigger: GGAAAATTTCCAAAACAACCAGGCACTTACGTACTG...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKPKVPS*ILRWFP
Trigger: TGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVSETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCCAAAAACTGAACATTaGTATCATTCACCAACTCCG +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADPKTEH*YHSPTP
Trigger: CGGAGTTGGTGAATGATACCAATGTTCAGTTTTTGG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CAA 72 bp ATACTTAACTCTGAAACACCGTCTAGTCTACAACGCTaGATTAACTGCTTCAAACTGCTTGTTTCTTATCTC +
Preference number: 4 (lower is better)
Translates to: ILNSETPSSLQR*INCFKLLVSYL
Trigger: GAGATAAGAAACAAGCAGTTTGAAGCAGTTAATCAAGCGTTGTAGACTAGACGGTGTTTCAGAGTTAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR TCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTCCATGTTGTCAATCTaGTCATTGCCAGGAATTAAC +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKSMLSI*SLPGIN
Trigger: GTTAATTCCTGGCAATGATCAGATTGACAACATGGA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR TCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATCATCAATATTATTCTaGTTGGCTGACAGGATAACG +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKSSILF*LADRIT
Trigger: CGTTATCCTGTCAGCCAATCAGAATAATATTGATGA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGATGCATTCCTTGTCCTaGAGCGAAGTATCATCAATA +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKMHSLS*SEVSSI
Trigger: TATTGATGATACTTCGCTTCAGGACAAGGAATGCAT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCTGTGTACATTTCATTaGAGACTCCTTCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKLCTFH*RLLPSS
Trigger: ACTACTTGGAAGGAGTCTCCAATGAAATGTACACAG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AGGGCTACTGTATCTATGACTTTACCACCATTCCAAAAGCAGAAAATATGGTTATCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: RATVSMTLPPFQKQKIWLSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...TAACCATATTTTCTGCTTTTGGAATGGTGGTAAAGTCATAGATACAGTAGCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: STGKIMKFDLLRAGVNADRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGAGTGAAACATTCCAGTaGAGTCGTACTTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSETFQ*SRTFSH
Trigger: ATGTGAAAAAGTACGACTCCACTGGAATGTTTCACT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAACCATTTCTTTTCTTaGCCCATTCTAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSNHFFS*PILVIL
Trigger: AAGGATGACTAGAATGGGCCAAGAAAAGAAATGGTT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTTATATTGGTTGATCTaGTTAGCCATGTGGGTACTC +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKLYWLI*LAMWVL
Trigger: GAGTACCCACATGGCTAACCAGATCAACCAATATAA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCTTGTGGATTTATATTaGTTGATCTGGTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: HSPQRKREKEEKCASRNLLVDLY*LIWLAM
Trigger: CATGGCTAACCAGATCAACCAATATAAATCCACAAG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACTTGTGGATTTATATTaGTTGATCTGGTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKLVDLY*LIWLAM
Trigger: CATGGCTAACCAGATCAACCAATATAAATCCACAAG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR TCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCAAACACAATGTGTTTaGGCTCATGATAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKQTQCV*AHDSES
Trigger: ACTTTCACTATCATGAGCTCAAACACATTGTGTTTG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR GCA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAATGCTGTCATCAAACTaGATAGATTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRMLSSN*IDLMLS
Trigger: ACTCAACATCAAATCTATGCAGTTTGATGACAGCAT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR GCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGATGTTTTCAGAGCTTTaGAGAACAGATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKMFSEL*RTDHHN
Trigger: GTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACAT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAAT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKSWILR*FPGLIN
Trigger: ATTAATTAACCCTGGGAACCACCTTAAGATCCAAGA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCGTACTTTTTCACATTaGAGTCCATGTTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKRTFSH*SPCCQS
Trigger: AGATTGACAACATGGACTCCAATGTGAAAAAGTACG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAACCATTTCTTTTCTTaGCCCATTCTAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKNHFFS*PILVIL
Trigger: AAGGATGACTAGAATGGGCCAAGAAAAGAAATGGTT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CCA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCTTGTGGATTTATATTaGTTGATCTGGTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: FLAILAYSRISTSDSACKLVDLY*LIWLAM
Trigger: CATGGCTAACCAGATCAACCAATATAAATCCACAAG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
3UTR CAA 72 bp TTTGCTATAGCAGGGGAGAGTAATTTCAAAATACAGTaGCTTAAACGAAGACAAACTGCATTCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FAIAGESNFKIQ*LKRRQTAFMRK
Trigger: CTTTCTCATGAATGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTATAGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
3UTR CAA 72 bp TATATGAGTGCTCTTGAACTTCTAAATCAGGCACAGTaGGAAACTTTCTGTTCTCCATTCAAAATATCTCTA +
Preference number: 4 (lower is better)
Translates to: YMSALELLNQAQ*ETFCSPFKISL
Trigger: TAGAGATATTTTGAATGGAGAACAGAAAGTTTCCAACTGTGCCTGATTTAGAAGTTCAAGAGCACTCATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS GCA 90 bp CCCCGAAGAAAGTCACCATGGAGGAGGCCAAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGCACGGCACCTCCATGGTCACCGGTA +
Preference number: 5 (lower is better)
Translates to: PRRKSPWRRPRKPTT*VGPGCRTAPPWSPV
Trigger: TACCGGTGACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp TTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGG +
Preference number: 5 (lower is better)
Translates to: LLWTGWSGRRSSSYWTTVSPPHA*APAVAR
Trigger: CCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCT...CACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS CCA 90 bp GAGGAAGAGGAGGAGGAGGACGCGTCTAGGCTGAGATGGTTCGCGTaGATATTGCTGCTCATTCTAAGACCGCTGCCTCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: EEEEEEDASRLRWFA*ILLLILRPLPPPPP
Trigger: CGGCGGCGGCGGAGGCAGCGGTCTTAGAATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCTTCCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS CCA 90 bp GCTCTTCCTGAACGTACTTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGG +
Preference number: 5 (lower is better)
Translates to: ALPERTSVCRGTPWT*AGSADLLWTGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGTACGTTCAGGAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100831.11
ENSMUST00000163322.3
ENSMUST00000223749.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224812.2
ENSMUST00000225471.2
CDS GCA 90 bp AACCAGGACTCTGCCAGTCAGTGTCTGGGCGGATATCATCACCCCTaGCCAGTCCTTCACAGATGTCATCCAGCCGACCTCGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: NQDSASQCLGGYHHP*PVLHRCHPADLGCH
Trigger: GTGGCAGCCGAGGTCGGCTGGATGACATCTGTGAAGGACTGGGCAGGGGTGATGATATCCGCCCAGACACTGACTGGCAGAGTCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CCA 90 bp AAGAAAGTCACCATGGAGGAGGCCAAGAAAGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGCACCTCCATGGTCACCGGTATGATG +
Preference number: 5 (lower is better)
Translates to: KKVTMEEAKKAHHMR*PRLSHGTSMVTGMM
Trigger: CATCATACCGGTGACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp ACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGTAAATTCCAAAACATGGGCCTCCTTCGTCTaGCCCCCGCAGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TLAGGAEVGISQPVNSKTWASFV*PPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCCA...TGTTTTGGAATTTACCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp ATGATGGGAATGTTGACCCCAGTTGTGATGGACGGCTGGCGTAACATCCCGTGCTGGGCCTCCTTCGTCTaGCCCCCGCAGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: MMGMLTPVVMDGWRNIPCWASFV*PPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCCA...GCACGGGATGTTACGCCAGCCGTCCATCACAACTGGGGTCAACATTCCCATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS CCA 90 bp AAAGCCGCTCTTCCTGAACGTACTTCTGTTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGT +
Preference number: 5 (lower is better)
Translates to: KAALPERTSVCRGTP*TWAGSADLLWTGWS
Trigger: ACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGTACGTTCAGGAAGAGCGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100831.11
ENSMUST00000163322.3
ENSMUST00000223749.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224812.2
ENSMUST00000225471.2
CDS CCA 90 bp ATACAAGTTCCCTTCTCTTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGG +
Preference number: 5 (lower is better)
Translates to: IQVPFSSVCRGTPWT*AGSADLLWTGWSGR
Trigger: CCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGAGAAGGGAACTTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172099.9
ENSMUST00000179836.8
CDS CCA 90 bp GAAGAGGAGGAGGAAGAGGAGGAGGAGGACGCGTCTAGGCTGAGATaGTTCGCGTGGATATTGCTGCTCATTCTAAGACCGCTGCCTCCG +
Preference number: 5 (lower is better)
Translates to: EEEEEEEEEDASRLR*FAWILLLILRPLPP
Trigger: CGGAGGCAGCGGTCTTAGAATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCTTCCTCCTCCTCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS CCA 90 bp ATTTGTGGGGATCCAAAGTTGATGGCCTTCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGGTACTTGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: ICGDPKLMAFVLPPQ*QQTVHRYLSVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 90 bp GAGTGCAGCCCTGGTGCTACAGATTGGAGCTGCTGGCTGTATTTGTaGGGATCCAAAGTTGATGGCCTTCGTCTTGCCCCCGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: ECSPGATDWSCWLYL*GSKVDGLRLAPAVA
Trigger: TGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACAGCCAGCAGCTCCAATCTGTAGCACCAGGGCTGCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CAA 90 bp GTAACATCCCGTGCACTGGGCTGTTGTCGGGTGATGATCTGTCCATTCCAGGAGACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: VTSRALGCCRVMICPFQETVHRY*SVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT...CTCCTGGAATGGACAGATCATCACCCGACAACAGCCCAGTGCACGGGATGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS TCA 90 bp AGCCGACCTCGGCTGCCACCACCTCCTCTTTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGCTGGAGCCATTGTTTATCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SRPRLPPPPLFRPLA*EYHLPGWSHCLSSG
Trigger: CCCAGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS TCA 90 bp CGGGAAGGTTCTCTCAAGGGTGTCCACGTTACCACGCACACGGCCTaGCATGCACGAGCAGTCACGCTCAGAACGTCCGCAATCAAAACA +
Preference number: 5 (lower is better)
Translates to: REGSLKGVHVTTHTA*HARAVTLRTSAIKT
Trigger: TGTTTTGATTGCGGACGTTCTGAGCGTGACTGCTCGTGCATGTCAGGCCGTGTGCGTGGTAACGTGGACACCCTTGAGAGAACCTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000074983.13
ENSMUST00000172099.9
ENSMUST00000179836.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224468.2
ENSMUST00000225556.2
CDS GCA 90 bp CTCAAGCCCCATGAAGCACAAACCCTGCTGCAAGCCACCAGTGACTaGCAGAAGTTCTCTGGTTCTTCTTTCTCAGGAGCCGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LKPHEAQTLLQATSD*QKFSGSSFSGAAGP
Trigger: TGGGCCAGCGGCTCCTGAGAAAGAAGAACCAGAGAACTTCTGGCAGTCACTGGTGGCTTGCAGCAGGGTTTGTGCTTCATGGGGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212576.2
CDS CCA 90 bp ACCTCCATGGTCACCGGTATGATGAGCGCATCCATCTTGGGCTCGTaGACCGAGGACGAGGAGGAAGAGGAGGAGGAAGAAGAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: TSMVTGMMSASILGS*TEDEEEEEEEEEEE
Trigger: CTCTTCTTCTTCTTCCTCCTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATCATACCGGTGACCATGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCACGGGATTGGCCAGCGTaGTGGTCAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPRDWPA*WSNCIR
Trigger: CCTGATGCAGTTTGACCACAACGCTGGCCAATCCCG...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GGCTCTGCAGGGAGTGGACAGAGGTGGAAGCTCATTTTGCCTACATTGGTAATTTGGGCCTCCTTCGTCTaGCCCCCGCAGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GSAGSGQRWKLILPTLVIWASFV*PPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCCA...AATTACCAATGTAGGCAAAATGAGCTTCCACCTCTGTCCACTCCCTGCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS TCA 90 bp TGCTACAGATTGGAGCTGCTGGCTGTATTTGTGGGGATCCAAAGTTaGTGGCCTTCGTCTTGCCCCCGCAGTGGCAGCAAACGGTCCACA +
Preference number: 5 (lower is better)
Translates to: CYRLELLAVFVGIQS*WPSSCPRSGSKRST
Trigger: TGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACAGCCAGCAGCTCCAATCTGTAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 90 bp CATCCAGCCGACCTCGGCTGCCACCACCTCCTCTTTTTCGTCCACTaGCTTGAGAGTACCATCTGCCTGGCTGGAGCCATTGTTTATCTT +
Preference number: 5 (lower is better)
Translates to: HPADLGCHHLLFFVH*LESTICLAGAIVYL
Trigger: AAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGATACCAAAGGCAACTaGCCCGGCTTAGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPDTKGN*PGLASS
Trigger: GGAACTCGCTAAGCCGGGCAAGTTGCCTTTGGTATC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS GCA 90 bp AGGTTCTCTCAAGGGTGTCCACGTTACCACGCACACGGCCTGACATaGACGAGCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATG +
Preference number: 5 (lower is better)
Translates to: RFSQGCPRYHAHGLT*TSSHAQNVRNQNNM
Trigger: CATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGCTCGTGCATGTCAGGCCGTGTGCGTGGTAACGTGGACACCCTTGAGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000074983.13
ENSMUST00000172099.9
ENSMUST00000179836.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224468.2
ENSMUST00000225556.2
CDS CCA 90 bp ACCACCTCCTCTTTTTCGTCCACTGGCTTGAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATCTTCTGGGCCTCCTTCGTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: TTSSFSSTGLRVPSA*LEPLFIFWASFVLP
Trigger: GGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CCA 90 bp GGCTTAGTGAAGCAGAGGTCCCTTGGACTCTTAGGAGTGCAGCCCTaGTGCTACAGATTGGAGCTGCTGGCTGTATTTGTGGGGATCCAA +
Preference number: 5 (lower is better)
Translates to: GLVKQRSLGLLGVQP*CYRLELLAVFVGIQ
Trigger: TTGGATCCCCACAAATACAGCCAGCAGCTCCAATCTGTAGCACCAGGGCTGCACTCCTAAGAGTCCAAGGGACCTCTGCTTCACTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CAA 90 bp ACGTACCTTTTTGTACACTGGCTGGGGGTGCTGAGGTGGGCATCTCTCAGCCGGAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: TYLFVHWLGVLRWASLSRRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...CCGGCTGAGAGATGCCCACCTCAGCACCCCCAGCCAGTGTACAAAAAGGTACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: GITRFRRPIRAELTSPKMNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp CTCCCTGGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LPGLGPVRPICCGRDGVDSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...GTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp CAGACTACGACATGGCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: QTTTWPLRTVMAASLRVKFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...CTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGCCATGTCGTAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp GATCACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGCATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DHHNNHHPLSLQRDHLTGHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...CCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGG +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSPPHA*APAVAR
Trigger: CCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGG +
Preference number: 5 (lower is better)
Translates to: NFSDWRDQAACGFILVDLSPPHA*APAVAR
Trigger: CCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCT...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS CCA 90 bp CTGAGAGCAAAGACTAACACAACCAGGACTCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCTGCCCAGTCCTTCACAGATGTCATC +
Preference number: 5 (lower is better)
Translates to: LRAKTNTTRTLPVSV*ADIITPAQSFTDVI
Trigger: GATGACATCTGTGAAGGACTGGGCAGGGGTGATGATATCCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGTTAGTCTTTGCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGCCTGGCTGGAGCCATaGTTTATCTTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGAWLEP*FIFWAS
Trigger: GGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: VRPICCGRDGVDGGALLTNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...AGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp GGATGGAGTGGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: GWSGRRSSSYWTTVRSGRVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...CCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCCACTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: GITRFRRPIRAELTSPKMSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCATTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGG +
Preference number: 5 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTSPPHA*APAVAR
Trigger: CCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCT...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS TCA 90 bp CGCTATAGGAGCCCCCGTATTTCTTGCGGTTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGGCAAACATGGCCAGTCCCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: RYRSPRISCGFLLTL*FQGRSWQTWPVPRG
Trigger: TCCTCGGGGGACTGGCCATGTTTGCCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTCCTATAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 30 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000212576.2
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
ENSMUST00000226051.2
CDS GCA 90 bp CATGCACGAGCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTAGATGGACATCTTGGGCCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: HARAVTLRTSAIKTT*SSHSLVDGHLGPPA
Trigger: TGCAGGCGGCCCAAGATGTCCATCTACAAGAGAATGAGACGAGCATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGCTCGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074983.13
ENSMUST00000179836.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000223655.2
ENSMUST00000224232.2
ENSMUST00000225556.2
CDS CCA 90 bp CTTGGGCACGTGTGGAGAATTGGGAGTCGCATTCTTGTGCATAAATaGGTCTTTGTGATAGCGGGCTCTAGCTTCAACCTTGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LGHVWRIGSRILVHK*VFVIAGSSFNLEPP
Trigger: AGGCGGCTCAAGGTTGAAGCTAGAGCCCGCTATCACAAAGACCCATTTATGCACAAGAATGCGACTCCCAATTCTCCACACGTGCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000100831.11
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225471.2
CDS-3UTR CAA 90 bp GGACGGAGGAGCTCTTCTTACTGGACGACTGTGAGGAGTGGGAGGAATGAGACAAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: GRRSSSYWTTVRSGRNETRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...TGTCTCATTCCTCCCACTCCTCACAGTCGTCCAGTAAGAAGAGCTCCTCCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCAAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACGGAGGAGCTCTTCTTACTAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: VRPICCGRDGVDGGALLTKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...AGTAAGAAGAGCTCCTCCGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TCTAACAGGGCTAACTGGGCCACTCGGCAACGGTCCCTGTTGGCCAATGTCTGCGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: SNRANWATRQRSLLANVCALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...GCAGACATTGGCCAACAGGGACCGTTGCCGAGTGGCCCAGTTAGCCCTGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: NFSDWRDQAACGFILVDLRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCTTGTTGCATTCTGTTaGTCGCGGGACTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGLVAFC*SRDSLD
Trigger: GTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGATGAGCGCATCCATCTaGGGCTCGTGGACCGAGGAC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRMSASI*GSWTED
Trigger: GTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCAT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTTTGGCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGG +
Preference number: 5 (lower is better)
Translates to: SLASLAMKNPKVPSWILRSPPHA*APAVAR
Trigger: CCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCT...CCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRTVHRY*SVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CACATGTCACAGAGGTTGATGTTGACAGCCCTTAAATCAGCCCGACTTAATGGTACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: HMSQRLMLTALKSARLNGTVHRY*SVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT...ACCATTAAGTCGGGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp CATGTGTTGTGTGTGTACATTTCCATCGAAGACTCTAAACAGCAGGACAGGTGCGCCTGGCTGGAGCCATaGTTTATCTTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HVLCVYISIEDSKQQDRCAWLEP*FIFWAS
Trigger: GGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGC...GCACCTGTCCTGCTGTTTAGAGTCTTCGATGGAAATGTACACACACAACACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp GGCATCACCAGGTTCCGGAGGCCAATCAGGGCTGAGCTGACATCCCCAAAGATGTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: GITRFRRPIRAELTSPKMYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...CATCTTTGGGGATGTCAGCTCAGCCCTGATTGGCCTCCGGAACCTGGTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp TGTAGCCTCCTCGAAGTGCATTCTCCTCAGCTATTAGAGCCTCGAGCTCTGGTGGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: CSLLEVHSPQLLEPRALVEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...CACCAGAGCTCGAGGCTCTAATAGCTGAGGAGAATGCACTTCGAGGAGGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp CACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGCTAGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: HHNNHHPLSLQRDHLTGLALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...TAGCCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GGTGCCTCTGGCTCACGACCTTCACATTCTAGGTGTGCCTATAACCCTTCCCCACACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: GASGSRPSHSRCAYNPSPHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...TGGGGAAGGGTTATAGGCACACCTAGAATGTGAAGGTCGTGAGCCAGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLARDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGG +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKSPPHA*APAVAR
Trigger: CCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTGGGCCTCCTTCGTCTaGCCCCCGCAGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDWASFV*PPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCCA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCCATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGRRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGATTGGCCAGCGTaGTGGTCAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIRDWPA*WSNCIR
Trigger: CCTGATGCAGTTTGACCACAACGCTGGCCAATCCCG...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAATGAGCGCATCCATCTaGGGCTCGTGGACCGAGGAC +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLMSASI*GSWTED
Trigger: GTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCAT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTGGGCCTCCTTCGTCTaGCCCCCGCAGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQWASFV*PPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCCA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GGCAAGATCATGTGGATTGAGGACAGAGCCCTGATAAAACTCCACCTGAGTGAACGTAGCGGGCAAACATaGCTTTCTTCCACTAACCGC +
Preference number: 5 (lower is better)
Translates to: GKIMWIEDRALIKLHLSERSGQT*LSSTNR
Trigger: GCGGTTAGTGGAAGAAAGCAATGTTTGCCCGCTACG...TTCACTCAGGTGGAGTTTTATCAGGGCTCTGTCCTCAATCCACATGATCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS GCA 90 bp CCCGAGGATGAAGAAGACCATGAAGAGGCGTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACCCACTGTAGACATTGTGACCATGAG +
Preference number: 5 (lower is better)
Translates to: PEDEEDHEEASKCGF*INVPITHCRHCDHE
Trigger: CTCATGGTCACAATGTCTACAGTGGGTTATGGGGACGTTTATGCAAAAACCACACTTGGACGCCTCTTCATGGTCTTCTTCATCCTCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 32 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000212576.2
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
ENSMUST00000226051.2
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CTCCACCTGAGTGAAATGCCGTTTGAACAGAGCCTCAAGCTCAAGGTTAGGGGAAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: LHLSEMPFEQSLKLKVRGKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...TCCCCTAACCTTGAGCTTGAGGCTCTGTTCAAACGGCATTTCACTCAGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGCATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GATCACCATAACAACCACCATCCCCTAAGTCTGCAAAGGGACCATCTAACAGGGCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: DHHNNHHPLSLQRDHLTGLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...CCCTGTTAGATGGTCCCTTTGCAGACTTAGGGGATGGTGGTTGTTATGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLAPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGCGGGATTGGCCAGCGTaGTGGTCAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKRDWPA*WSNCIR
Trigger: CCTGATGCAGTTTGACCACAACGCTGGCCAATCCCG...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCATGAGCGCATCCATCTaGGGCTCGTGGACCGAGGAC +
Preference number: 5 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTMSASI*GSWTED
Trigger: GTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCAT...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYTVHRY*SVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTTVHRY*SVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTCTTTTCTGTTCTGTTaGTCGCGGGACTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRSFLFC*SRDSLD
Trigger: GTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCTTGATGGCCTTCGTCTaGCCCCCGCAGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTLMAFV*PPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAA...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS GCA 90 bp CATGCACGAGCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTAGATGGACATCTTGGCTATAACCAG +
Preference number: 5 (lower is better)
Translates to: HARAVTLRTSAIKTT*SSHSLVDGHLGYNQ
Trigger: CTGGTTATAGCCAAGATGTCCATCTACAAGAGAATGAGACGAGCATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGCTCGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172099.9
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GAAGTTCGGGGATGCTTTGACAGGCACATGTGTTGTGTGTGTACATTTCCATCGGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: EVRGCFDRHMCCVCTFPSEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...CGATGGAAATGTACACACACAACACATGTGCCTGTCAAAGCATCCCCGAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp GCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGATGACTTTCTCAATTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: ATQDSHGSFTSSQDDFLNSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...ATTGAGAAAGTCATCTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NFSDWRDQAACGFILVDLFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTACATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AGTCCATGTTGTCAATCTGATCATTGCCAGGAATTAACAAGGGGTCATGCCTCAAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: SPCCQSDHCQELTRGHASRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...TGAGGCATGACCCCTTGTTAATTCCTGGCAATGATCAGATTGACAACATGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: STSLIGGIRLLVDLYWLIVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRRRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCGGGATTGGCCAGCGTaGTGGTCAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLARDWPA*WSNCIR
Trigger: CCTGATGCAGTTTGACCACAACGCTGGCCAATCCCG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTTGCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: TLFTRQESYHWLLQMTELQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...CAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTT +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKRDSLD*GRFGRF
Trigger: AAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQTVHRY*SVRQSK
Trigger: CTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS GCA 90 bp CATGCACGAGCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTAGATGGACATCTTGGAATAGATCAG +
Preference number: 5 (lower is better)
Translates to: HARAVTLRTSAIKTT*SSHSLVDGHLGIDQ
Trigger: CTGATCTATTCCAAGATGTCCATCTACAAGAGAATGAGACGAGCATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGCTCGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224077.2
ENSMUST00000224468.2
CDS-3UTR CAA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GCCACTCAGGACAGTCATGGCAGCTTCACTTCGAGTCAAGATGACTTTCTCAATGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: ATQDSHGSFTSSQDDFLNVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...ATTGAGAAAGTCATCTTGACTCGAAGTGAAGCTGCCATGACTGTCCTGAGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLAFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGACTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGCTTCGGGGAGGTGTaGGGCGAGTTCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKSFGEV*GEFLMP
Trigger: GGGCATGAGGAACTCGCCCAACACCTCCCCGAAGCT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGCIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIRRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACCGTGCACTGGGCTGTaGTCGGGTGATGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRPCTGL*SGDDLS
Trigger: GGACAGATCATCACCCGACAACAGCCCAGTGCACGG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCCAGACTGGCCCGGGATaGGCCAGCGTTGTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSQTGPG*ASVVVK
Trigger: TTTGACCACAACGCTGGCCAATCCCGGGCCAGTCTG...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCTTGTTGCATTCTGTTaGTCGCGGGACTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLALVAFC*SRDSLD
Trigger: GTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAG...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAACTTGTTGCATTCTGTTaGTCGCGGGACTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQLVAFC*SRDSLD
Trigger: GTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAG...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTGGTTCGCGTGGATATaGCTGCTCATTCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIWFAWI*LLILRP
Trigger: CGGTCTTAGAATGAGCAGCAATATCCACGCGAACCA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTGGTTCGCGTGGATATaGCTGCTCATTCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIWFAWI*LLILRP
Trigger: CGGTCTTAGAATGAGCAGCAATATCCACGCGAACCA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCTGGCTGGAGCCATaGTTTATCTTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLAWLEP*FIFWAS
Trigger: GGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGCCTGGCTGGAGCCATaGTTTATCTTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRAWLEP*FIFWAS
Trigger: GGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGCCTGGCTGGAGCCATaGTTTATCTTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSAWLEP*FIFWAS
Trigger: GGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GACACTTTCGGGAAGTTGTGCAGTGTTTCCCACTCCCTCTTGAGGTACTCAATGTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: DTFGKLCSVSHSLLRYSMYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...CATTGAGTACCTCAAGAGGGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTGGTTCCCAGGGGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: LAMKNPKVPSWILRWFPGEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...CCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLATSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATAATGGCACTTTTGAATGTAAGCAGCAAAGACATTGTGCTAACGTGGGCACAAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HNGTFECKQQRHCANVGTKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...TGTGCCCACGTTAGCACAATGTCTTTGCTGCTTACATTCAAAAGTGCCATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGCATTGTGGAGAGGCCTaGAGCCAGACAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKHCGEA*SQTALG
Trigger: GCCCAGAGCTGTCTGGCTCAAGGCCTCTCCACAATG...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIILIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AGCAGGGAAAAGAACATAGCAGACTCTCCCACAGTCCACATGACTTGCATGGGTTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: SREKNIADSPTVHMTCMGSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...ACCCATGCAAGTCATGTGGACTGTGGGAGAGTCTGCTATGTTCTTTTCCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGTTTCCCACTCCCTCTaGAGGTACTCAATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVVSHSL*RYSMEP
Trigger: GGGCTCCATTGAGTACCTCAAGAGGGAGTGGGAAAC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLADTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGISQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGACACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKRRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLRRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCGGGATTGGCCAGCGTaGTGGTCAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADRDWPA*WSNCIR
Trigger: CCTGATGCAGTTTGACCACAACGCTGGCCAATCCCG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACGGGATTGGCCAGCGTaGTGGTCAAACTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRRDWPA*WSNCIR
Trigger: CCTGATGCAGTTTGACCACAACGCTGGCCAATCCCG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGATACCAAAGGCAACTaGCCCGGCTTAGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQDTKGN*PGLASS
Trigger: GGAACTCGCTAAGCCGGGCAAGTTGCCTTTGGTATC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGATACCAAAGGCAACTaGCCCGGCTTAGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRDTKGN*PGLASS
Trigger: GGAACTCGCTAAGCCGGGCAAGTTGCCTTTGGTATC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTCTTTTCTGTTCTGTTaGTCGCGGGACTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYSFLFC*SRDSLD
Trigger: GTCCAGGGAGTCCCGCGACAAACAGAACAGAAAAGA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGGGCATCTCTCAGCCGGTAAATTCCAAAACAAAGCATATTATATGTTTTCAGACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VGISQPVNSKTKHIICFQTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...CTGAAAACATATAATATGCTTTGTTTTGGAATTTACCGGCTGAGAGATGCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTTCCAGCTGGGGATGTaGAGCAGATGGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSFQLGM*SRWALL
Trigger: CAACAAGGCCCATCTGCTCAACATCCCCAGCTGGAA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: NFSDWRDQAACGFILVDLLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIISLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: STSLIGGIRLLVDLYWLISQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTCACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLARRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGAGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCCCAGTTCTTTCTTTTATTCATTCTGTAGTTCTCGCTCAAACATTGCCCACCTGGTTCGCGTGGATATaGCTGCTCATTCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: FPVLSFIHSVVLAQTLPTWFAWI*LLILRP
Trigger: CGGTCTTAGAATGAGCAGCAATATCCACGCGAACCA...GGTGGGCAATGTTTGAGCGAGAACTACAGAATGAATAAAAGAAAGAACTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 90 bp AATCTTGTTGTGATACTGCAGCATCTGAGTGATGATCCTGATCTTTaGGTGGTAGTTTTTGATGGAGATCACTCTCATGATGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: NLVVILQHLSDDPDL*VVVFDGDHSHDVGG
Trigger: GCCTCCAACATCATGAGAGTGATCTCCATCAAAAACTACCACCCAAAGATCAGGATCATCACTCAGATGCTGCAGTATCACAACAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000179836.8
ENSMUST00000225556.2
ENSMUST00000226051.2
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLARRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLANHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCCGGTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: HVGTHGLDLNVSGIGIIRYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...CCGGATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: NFSDWRDQAACGFILVDLVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLAEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAACATCATCCCGGTCCTaGTGCAGAAAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRTSSRS*CRKSFR
Trigger: CCTGAAGGACTTTCTGCACAAGGACCGGGATGATGT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ATTCCTTGTCCTGAAGCGAAGTATCATCAATATTATTCTGATTGGCTGACAGGAAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IPCPEAKYHQYYSDWLTGKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...TCCTGTCAGCCAATCAGAATAATATTGATGATACTTCGCTTCAGGACAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190985.8
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: STSLIGGIRLLVDLYWLISLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GAGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: ESTFIFNFSDWRDQAACGSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...TCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGACACTTTCGGGAAGTaGTGCAGTGTTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRDTFGK*CSVSHS
Trigger: GGAGTGGGAAACACTGCACAACTTCCCGAAAGTGTC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTACACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGIIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLARRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGACTCATGGGCTTGATTaGAATGTTTCTGGGATAGGC +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKTHGLD*NVSGIG
Trigger: GCCTATCCCAGAAACATTCAAATCAAGCCCATGAGT...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS CCA 90 bp TCACTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAATATTCTGCTCCGTGAACGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLAMKNPKVPSWILR*FPGLINILLRERLS
Trigger: AGAGAGCCGTTCACGGAGCAGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000172099.9
CDS CCA 90 bp TCACTTGCGATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAATATTCGCTTTCGGCTTCGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLAMKNPKVPSWILR*FPGLINIRFRLRLS
Trigger: AGAGAGCCGAAGCCGAAAGCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224468.2
ENSMUST00000224812.2
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTAGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: VSHVGTHGLDLNVSGIGISRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...AATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AGCCATGTGGGTACTCATGGGCTTGATTTGAATGTTTCTGGGATAGGCATTATCTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: SHVGTHGLDLNVSGIGIIYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...GATAATGCCTATCCCAGAAACATTCAAATCAAGCCCATGAGTACCCACATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALEPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGCTCTGCAAGGCATATaGCGTCATCACCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKALQGI*RHHPLS
Trigger: GGAAAGAGGGTGATGACGCAATATGCCTTGCAGAGC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGAGATTGGCAAGCATaGTGGAGAGGCCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKRDWQA*WRGLEP
Trigger: TGGCTCAAGGCCTCTCCACAATGCTTGCCAATCTCT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTTTTTGGTGACAGGGTaGGCGGCTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLFLVTG*AAAHLQ
Trigger: TTGAAGATGAGCAGCCGCCAACCCTGTCACCAAAAA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AGTCAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: SQHSSSTSLIGGIRLLVDSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...ATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: STSLIGGIRLLVDLYWLICIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...GATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCAAGGAGGTGTGAATCCTaGGGAATTAGCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: IAGESNFKIQLLKRRQTARRCES*GISLQD
Trigger: GTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCT...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLAVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGATGGTTCGCGTGGATATaGCTGCTCATTCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRWFAWI*LLILRP
Trigger: CGGTCTTAGAATGAGCAGCAATATCCACGCGAACCA...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAAGGAGGAAGAACACGTaGAAAGCCATGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKRRKNT*KAMSIC
Trigger: ACAGATCGACATGGCTTTCAACGTGTTCTTCCTCCT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRNHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ATAGCAGGGGAGAGTAATTTCAAAATACAGTTGCTTAAACGAAGACAAACTGCAAACCACAGCTTATCGTaGGCTGCAATAAACCGCAAG +
Preference number: 5 (lower is better)
Translates to: IAGESNFKIQLLKRRQTANHSLS*AAINRK
Trigger: CTTGCGGTTTATTGCAGCCAACGATAAGCTGTGGTT...TGCAGTTTGTCTTCGTTTAAGCAACTGTATTTTGAAATTACTCTCCCCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp CAACATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTAAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: QHSSSTSLIGGIRLLVDLSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...TAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp AACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATCTGAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: NFSDWRDQAACGFILVDLSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...CAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGAGCCCCCGTATTTCTaGCGGTTTCCTATTAACTCT +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGREPPYF*RFPINS
Trigger: AGAGTTAATAGGAAACCGCAAGAAATACGGGGGCTC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAAGACAATCTCCACGTaGACATCATCCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKKTIST*TSSRSL
Trigger: CAAGGACCGGGATGATGTCAACGTGGAGATTGTCTT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATCTCATAGAGAAGAGATaGGCAAGCATTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADLIEKR*ASIVER
Trigger: CCTCTCCACAATGCTTGCCAATCTCTTCTCTATGAG...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: FIFNFSDWRDQAACGFILALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...CAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp CCACCAGTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: PPVIQHVRGRKVTSPFMKSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...CTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCACTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAATCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTCACAGAGGTTGATGTaGACAGCCCTTAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSSQRLM*TALKSA
Trigger: GGCTGATTTAAGGGCTGTCAACATCAACCTCTGTGA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGCACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCCACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYCIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp TTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTGGTTGATTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: FNFSDWRDQAACGFILVDCIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...ATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp ACCCTTTTTACAAGACAAGAGAGTTATCACTGGTTGTTACAGATGACAGAGTTGGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: TLFTRQESYHWLLQMTELVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...CAACTCTGTCATCTGTAACAACCAGTGATAACTCTCTTGTCTTGTAAAAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145596.3
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAAATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAGAAGATCAGGTCTGTaGGTACGAGCTCAAACTCGT +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSRRSGL*VRAQTR
Trigger: ACGAGTTTGAGCTCGTACCAACAGACCTGATCTTCT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS CCA 90 bp ACTTCTTTGGCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCAGGGTTAATTAATATTCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: TSLASLAMKNPKVPS*ILRWFPGLINILLR
Trigger: ACGGAGCAGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCAAAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000172099.9
CDS CCA 90 bp ACTTCTTTGGCATCACTTGCGATGAAAAATCCTAAAGTACCTTCTTaGATCTTAAGGTGGTTCCCAGGGTTAATTAATATTCGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: TSLASLAMKNPKVPS*ILRWFPGLINIRFR
Trigger: CCGAAAGCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCATCGCAAGTGATGCCAAAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224468.2
ENSMUST00000224812.2
CDS-3UTR CAA 90 bp TTCCAGTGGAGTCGTACTTTTTCACATTGGAGTCCATGTTGTCAATCTGATCATAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: FQWSRTFSHWSPCCQSDHSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...ATGATCAGATTGACAACATGGACTCCAATGTGAAAAAGTACGACTCCACTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190985.8
ENSMUST00000225794.2
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAAAGTGCCTGGTTGTTTaGGAAATTTTCCCATGGGTC +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRKCLVV*EIFPWV
Trigger: GACCCATGGGAAAATTTCCAAAACAACCAGGCACTT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CCAACAAATGAAAATCTGAGCAAAAGTCATCTCCTTGACAGACTACCGAACCAATACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PTNENLSKSHLLDRLPNQYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...TTGGTTCGGTAGTCTGTCAAGGAGATGACTTTTGCTCAGATTTTCATTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGTCCAAGTGTGGTTTTaGCATAAACGTCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKVQVWF*HKRPHN
Trigger: GTTATGGGGACGTTTATGCAAAAACCACACTTGGAC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTCAGCGCAATACTTATaGGCAAGGATCAGGCATGCA +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKSAQYL*ARIRHA
Trigger: TGCATGCCTGATCCTTGCCAATAAGTATTGCGCTGA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATC +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSSLLAD*YSMAII
Trigger: GATGATAGCCATTGAGTACAAGTCTGCCAACAGAGA...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCATCTTCAACTTCTCTGATTGGAGGGATCAGGCTGCTTGTGGATTTATATTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: HSSSTSLIGGIRLLVDLYSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...ATATAAATCCACAAGCAGCCTGATCCCTCCAATCAGAGAAGTTGAAGATGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000074983.13
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000190044.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAACACATGTCACAGAGGTaGATGTTGACAGCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKHMSQR*MLTALK
Trigger: TTTAAGGGCTGTCAACATCAACCTCTGTGACATGTG...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATGTGAGGATATTGTCATaGAAGTATGTCGCGCTCATG +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADVRILS*KYVALM
Trigger: CATGAGCGCGACATACTTCAATGACAATATCCTCAC...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCAAACCATTTCTTTTCTaGGCCCATTCTAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: SPQRKREKEEKCASRNLAKPFLF*AHSSHP
Trigger: AGGATGACTAGAATGGGCCAAGAAAAGAAATGGTTT...GGCCAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCACTCATGGGCTTGATTaGAATGTTTCTGGGATAGGC +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSTHGLD*NVSGIG
Trigger: GCCTATCCCAGAAACATTCAAATCAAGCCCATGAGT...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAACTCATGGGCTTGATTaGAATGTTTCTGGGATAGGC +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRTHGLD*NVSGIG
Trigger: GCCTATCCCAGAAACATTCAAATCAAGCCCATGAGT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAGTGGATTTATATTGGTaGATCTGGTTAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALVDLYW*IWLAMW
Trigger: CCACATGGCTAACCAGATCAACCAATATAAATCCAC...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGACCATTTCTTTTCTGCTaGGCCCATTCTAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRPFLFC*AHSSHP
Trigger: AGGATGACTAGAATGGGCCAAGCAGAAAAGAAATGG...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112423.10
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: DSACKRKKSHVTIYEVCQYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...CTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTGATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCTACGTAAGTGCCTGGTaGTTTTGGAAATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: VIQHVRGRKVTSPFMKFVYVSAW*FWKFSH
Trigger: ATGGGAAAATTTCCAAAACAACCAGGCACTTACGTA...GACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCCCTTTTAACTTCTTaGGCATCACTTGCGATGAAA +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLALLTS*ASLAMK
Trigger: TTTCATCGCAAGTGATGCCAAAGAAGTTAAAAGGGC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTATCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp ATTCAGCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: IQHVRGRKVTSPFMKFVRSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...CCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGCTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp AATGTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: NVLSQQFNQGKPTNENLSVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...GCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAATTAGGGTGAGGATATaGTCATTGAAGTATGTCGCG +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKIRVRI*SLKYVA
Trigger: CGCGACATACTTCAATGACAATATCCTCACCCTAAT...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GCATGTAAGAGGAAGAAAAGTCACGTCACCATTTATGAAGTTTGTCAGGCTTTAAAACCATTTCTTTTCTaGGCCCATTCTAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: ACKRKKSHVTIYEVCQALKPFLF*AHSSHP
Trigger: AGGATGACTAGAATGGGCCAAGAAAAGAAATGGTTT...TAAAGCCTGACAAACTTCATAAATGGTGACGTGACTTTTCTTCCTCTTACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGTGGATTTATATTGGTaGATCTGGTTAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRVDLYW*IWLAMW
Trigger: CCACATGGCTAACCAGATCAACCAATATAAATCCAC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp GTTTTATCCCAGCAATTCAACCAAGGAAAGCCAACAAATGAAAATCTGAGCAAAGTGGATTTATATTGGTaGATCTGGTTAGCCATGTGG +
Preference number: 5 (lower is better)
Translates to: VLSQQFNQGKPTNENLSKVDLYW*IWLAMW
Trigger: CCACATGGCTAACCAGATCAACCAATATAAATCCAC...TTTGCTCAGATTTTCATTTGTTGGCTTTCCTTGGTTGAATTGCTGGGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TCAACTGGGAAGATAATGAAGTTTGATTTGTTAAGAGCTGGTGTCAATGCAGATAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: STGKIMKFDLLRAGVNADSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...ATCTGCATTGACACCAGCTCTTAACAAATCAAACTTCATTATCTTCCCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTGCATAGATTTGATGTaGAGTGACGCCAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKCIDLM*SDAKMH
Trigger: ATGCATCTTGGCGTCACTCAACATCAAATCTATGCA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGGTCATCGTCATCGTCTaGGTCCAAAAACTGAACATT +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKVIVIV*VQKLNI
Trigger: AATGTTCAGTTTTTGGACCAAGACGATGACGATGAC...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp CATTCTCCTCAAAGAAAAAGAGAGAAAGAAGAGAAATGTGCATCAAGGAATCTGGCTTGTGGATTTATATaGGTTGATCTGGTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: HSPQRKREKEEKCASRNLACGFI*VDLVSH
Trigger: ATGGCTAACCAGATCAACCAATATAAATCCACAAGC...CAGATTCCTTGATGCACATTTCTCTTCTTTCTCTCTTTTTCTTTGAGGAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp CAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGGAAGAGCTTGTGGATTTATATaGGTTGATCTGGTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: QFLLILEFPPVIQHVRGRACGFI*VDLVSH
Trigger: ATGGCTAACCAGATCAACCAATATAAATCCACAAGC...TCTTCCTCTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKSRFTS*MELLVL
Trigger: TAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGTCGTACTTTTTCACATaGGAGTCCATGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKSYFFT*ESMLSI
Trigger: GATTGACAACATGGACTCCAATGTGAAAAAGTACGA...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188285.7
CDS-3UTR CAA 90 bp TTTCTTGCAATTCTTGCTTATTCTAGAATTTCCACCAGTGATTCAGCATGTAAGAAACCATTTCTTTTCTaGGCCCATTCTAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: FLAILAYSRISTSDSACKKPFLF*AHSSHP
Trigger: AGGATGACTAGAATGGGCCAAGAAAAGAAATGGTTT...CTTACATGCTGAATCACTGGTGGAAATTCTAGAATAAGCAAGAATTGCAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065788.15
ENSMUST00000177634.8
ENSMUST00000179097.8
CDS CAA 90 bp GAGGAGGAGGAGGACGCGTCTAGGCTGAGATGGTTCGCGTGGATATaGCTGCTCATTCTAAGACCGCTGCCTCCGCCGCCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: EEEEDASRLRWFAWI*LLILRPLPPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGAGGCAGCGGTCTTAGAATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS CCA 72 bp ACCATGGAGGAGGCCAAGAAAGCCCACCACATGCGTTaGCCCCGGCTGTCGCACGGCACCTCCATGGTCACC +
Preference number: 6 (lower is better)
Translates to: TMEEAKKAHHMR*PRLSHGTSMVT
Trigger: GGTGACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CAA 72 bp CACCATGGAGGAGGCCAAGAAAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGGCACCTCCATGGTCAC +
Preference number: 6 (lower is better)
Translates to: HHGGGQESPPHA*APAVARHLHGH
Trigger: GTGACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS GCA 72 bp AAGTCACCATGGAGGAGGCCAAGAAAGCCCACCACATaGGTTGGCCCCGGCTGTCGCACGGCACCTCCATGG +
Preference number: 6 (lower is better)
Translates to: KSPWRRPRKPTT*VGPGCRTAPPW
Trigger: CCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CCA 72 bp CCCTTCTCTTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGG +
Preference number: 6 (lower is better)
Translates to: PFSSVCRGTPWT*AGSADLLWTGW
Trigger: CCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172099.9
ENSMUST00000179836.8
CDS CCA 72 bp GAACGTACTTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGG +
Preference number: 6 (lower is better)
Translates to: ERTSVCRGTPWT*AGSADLLWTGW
Trigger: CCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGTACGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100831.11
ENSMUST00000163322.3
ENSMUST00000223749.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224812.2
ENSMUST00000225471.2
CDS CAA 72 bp GAGGACGCGTCTAGGCTGAGATGGTTCGCGTGGATATaGCTGCTCATTCTAAGACCGCTGCCTCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: EDASRLRWFAWI*LLILRPLPPPP
Trigger: CGGCGGCGGAGGCAGCGGTCTTAGAATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS CAA 72 bp TTGCCCCCGCAGTGGCAGCAAACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAGATGATGAAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LPPQWQQTVHRY*SVRQSKMMKRP
Trigger: GGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CAA 72 bp TCCCTTCTCTTCTGTTTGTCGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATG +
Preference number: 6 (lower is better)
Translates to: SLLFCLSRDSLD*GRFGRFAVDGM
Trigger: CATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGAGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172099.9
ENSMUST00000179836.8
CDS CAA 90 bp GAAGAAAGTCACCATGGAGGAGGCCAAGAAAGCCCACCACATGCGTaGGCCCCGGCTGTCGCACGGCACCTCCATGGTCACCGGTATGAT +
Preference number: 6 (lower is better)
Translates to: EESHHGGGQESPPHA*APAVARHLHGHRYD
Trigger: ATCATACCGGTGACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCTTGGCCTCCTCCATGGTGACTTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CAA 90 bp GCCTTCGTCTTGCCCCCGCAGTGGCAGCAAACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAGATGATGAAGAGGCCCCCGAAGAAA +
Preference number: 6 (lower is better)
Translates to: AFVLPPQWQQTVHRY*SVRQSKMMKRPPKK
Trigger: TTTCTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS TCA 72 bp TCTCTCAAGGGTGTCCACGTTACCACGCACACGGCCTaGCATGCACGAGCAGTCACGCTCAGAACGTCCGCA +
Preference number: 6 (lower is better)
Translates to: SLKGVHVTTHTA*HARAVTLRTSA
Trigger: TGCGGACGTTCTGAGCGTGACTGCTCGTGCATGTCAGGCCGTGTGCGTGGTAACGTGGACACCCTTGAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000074983.13
ENSMUST00000172099.9
ENSMUST00000179836.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224468.2
ENSMUST00000225556.2
CDS CCA 72 bp TTGTTGCATTCTGTTTGTCGCGGGACTCCCTGGACTTaGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGG +
Preference number: 6 (lower is better)
Translates to: LLHSVCRGTPWT*AGSADLLWTGW
Trigger: CCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAATGCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188210.8
ENSMUST00000224025.2
ENSMUST00000224787.2
ENSMUST00000225431.2
CDS CCA 72 bp CTTCCTGAACGTACTTCTGTTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACG +
Preference number: 6 (lower is better)
Translates to: LPERTSVCRGTP*TWAGSADLLWT
Trigger: CGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGTACGTTCAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100831.11
ENSMUST00000163322.3
ENSMUST00000223749.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224812.2
ENSMUST00000225471.2
CDS CCA 72 bp TTTATCTTCTGGGCCTCCTTCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGGTACTTGAGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: FIFWASFVLPPQ*QQTVHRYLSVR
Trigger: GCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGAGGCCCAGAAGATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CCA 72 bp CAAGTTCCCTTCTCTTCTGTTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACG +
Preference number: 6 (lower is better)
Translates to: QVPFSSVCRGTP*TWAGSADLLWT
Trigger: CGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGAGAAGGGAACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172099.9
ENSMUST00000179836.8
CDS CCA 72 bp GATCCAAAGTTGATGGCCTTCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGGTACTTGAGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: DPKLMAFVLPPQ*QQTVHRYLSVR
Trigger: GCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CAA 72 bp CTTGTTGCATTCTGTTTGTCGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATG +
Preference number: 6 (lower is better)
Translates to: LVAFCLSRDSLD*GRFGRFAVDGM
Trigger: CATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188210.8
ENSMUST00000224025.2
ENSMUST00000224787.2
ENSMUST00000225431.2
CDS CAA 72 bp ACCTCCATGGTCACCGGTATGATGAGCGCATCCATCTaGGGCTCGTGGACCGAGGACGAGGAGGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: TSMVTGMMSASI*GSWTEDEEEEE
Trigger: CTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATCATACCGGTGACCATGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224025.2
ENSMUST00000224468.2
CDS CAA 90 bp CTAGTCATCCTTGTTGCATTCTGTTTGTCGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACG +
Preference number: 6 (lower is better)
Translates to: LVILVAFCLSRDSLD*GRFGRFAVDGMEWT
Trigger: CGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAGGATGACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188210.8
ENSMUST00000224025.2
ENSMUST00000224787.2
ENSMUST00000225431.2
CDS CAA 90 bp TCCTTCGTCTTGCCCCCGCAGTGGCAGCAAACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAGATGATGAAGAGGCCCCCGAAGAAA +
Preference number: 6 (lower is better)
Translates to: SFVLPPQWQQTVHRY*SVRQSKMMKRPPKK
Trigger: TTTCTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 20 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CAA 90 bp ACCTTCGTCTTGCCCCCGCAGTGGCAGCAAACGGTCCACAGGTACTaGAGCGTCCGCCAGAGCAAGATGATGAAGAGGCCCCCGAAGAAA +
Preference number: 6 (lower is better)
Translates to: TFVLPPQWQQTVHRY*SVRQSKMMKRPPKK
Trigger: TTTCTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224787.2
CDS CAA 90 bp AATACAAGTTCCCTTCTCTTCTGTTTGTCGCGGGACTCCCTGGACTaGGGCCGGTTCGGCCGATTTGCTGTGGACGGGATGGAGTGGACG +
Preference number: 6 (lower is better)
Translates to: NTSSLLFCLSRDSLD*GRFGRFAVDGMEWT
Trigger: CGTCCACTCCATCCCGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAAGAGAAGGGAACTTGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172099.9
ENSMUST00000179836.8
CDS CAA 90 bp GCTGCTGGCTGTATTTGTGGGGATCCAAAGTTGATGGCCTTCGTCTaGCCCCCGCAGTGGCAGCAAACGGTCCACAGGTACTTGAGCGTC +
Preference number: 6 (lower is better)
Translates to: AAGCICGDPKLMAFV*PPQWQQTVHRYLSV
Trigger: GACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACAGCCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS GCA 72 bp TCTGCCAGTCAGTGTCTGGGCGGATATCATCACCCCTaGCCAGTCCTTCACAGATGTCATCCAGCCGACCTC +
Preference number: 6 (lower is better)
Translates to: SASQCLGGYHHP*PVLHRCHPADL
Trigger: GAGGTCGGCTGGATGACATCTGTGAAGGACTGGGCAGGGGTGATGATATCCGCCCAGACACTGACTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS GCA 72 bp CAAGGGTGTCCACGTTACCACGCACACGGCCTGACATaGACGAGCAGTCACGCTCAGAACGTCCGCAATCAA +
Preference number: 6 (lower is better)
Translates to: QGCPRYHAHGLT*TSSHAQNVRNQ
Trigger: TTGATTGCGGACGTTCTGAGCGTGACTGCTCGTGCATGTCAGGCCGTGTGCGTGGTAACGTGGACACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000074983.13
ENSMUST00000172099.9
ENSMUST00000179836.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224468.2
ENSMUST00000225556.2
CDS CCA 72 bp GACCTCGGCTGCCACCACCTCCTCTTTTTCGTCCACTaGCTTGAGAGTACCATCTGCCTGGCTGGAGCCATT +
Preference number: 6 (lower is better)
Translates to: DLGCHHLLFFVH*LESTICLAGAI
Trigger: AATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGTGGCAGCCGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CCA 72 bp TCATCCTTGTTGCATTCTGTTTGTCGCGGGACTCCCTaGACTTGGGCCGGTTCGGCCGATTTGCTGTGGACG +
Preference number: 6 (lower is better)
Translates to: SSLLHSVCRGTP*TWAGSADLLWT
Trigger: CGTCCACAGCAAATCGGCCGAACCGGCCCAAGTCCAGGGAGTCCCGCGACAAACAGAATGCAACAAGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000065788.15
ENSMUST00000112423.10
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000188210.8
ENSMUST00000224025.2
ENSMUST00000224787.2
ENSMUST00000225431.2
CDS CCA 72 bp GAGGAGGAGGACGCGTCTAGGCTGAGATGGTTCGCGTaGATATTGCTGCTCATTCTAAGACCGCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: EEEDASRLRWFA*ILLLILRPLPP
Trigger: CGGAGGCAGCGGTCTTAGAATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS CCA 72 bp GCAAAGACTAACACAACCTTCGTCTTGCCCCCGCAGTaGCAGCAAACGGTCCACAGGTACTTGAGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: AKTNTTFVLPPQ*QQTVHRYLSVR
Trigger: GCGGACGCTCAAGTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGTTGTGTTAGTCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224787.2
CDS CAA 90 bp CAGCCGACCTCGGCTGCCACCACCTCCTCTTTTTCGTCCACTGGCTaGAGAGTACCATCTGCCTGGCTGGAGCCATTGTTTATCTTCTGG +
Preference number: 6 (lower is better)
Translates to: QPTSAATTSSFSSTG*RVPSAWLEPLFIFW
Trigger: CCAGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGTGGCAGCCGAGGTCGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CAA 90 bp GTGCTACAGATTGGAGCTGCTGGCTGTATTTGTGGGGATCCAAAGTaGATGGCCTTCGTCTTGCCCCCGCAGTGGCAGCAAACGGTCCAC +
Preference number: 6 (lower is better)
Translates to: VLQIGAAGCICGDPK*MAFVLPPQWQQTVH
Trigger: GTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACAGCCAGCAGCTCCAATCTGTAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CAA 72 bp ACTGGCTTGAGAGTACCATCTGCCTGGCTGGAGCCATaGTTTATCTTCTGGGCCTCCTTCGTCTTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: TGLRVPSAWLEP*FIFWASFVLPP
Trigger: CGGGGGCAAGACGAAGGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS TCA 72 bp CGGCTGCCACCACCTCCTCTTTTTCGTCCACTGGCTTaGGAGTACCATCTGCCTGGCTGGAGCCATTGTTTA +
Preference number: 6 (lower is better)
Translates to: RLPPPPLFRPLA*EYHLPGWSHCL
Trigger: TAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGTGGCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS TCA 72 bp TTGGAGCTGCTGGCTGTATTTGTGGGGATCCAAAGTTaGTGGCCTTCGTCTTGCCCCCGCAGTGGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: LELLAVFVGIQS*WPSSCPRSGSK
Trigger: TTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACAGCCAGCAGCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 72 bp GAGGAAGAGGAGGAGGAGGACGCGTCTAGGCTGAGATaGTTCGCGTGGATATTGCTGCTCATTCTAAGACCG +
Preference number: 6 (lower is better)
Translates to: EEEEEEDASRLR*FAWILLLILRP
Trigger: CGGTCTTAGAATGAGCAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCTTCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190339.2
ENSMUST00000224468.2
CDS CAA 72 bp TCGGCTGCCACCACCTCCTCTTTTTCGTCCACTGGCTaGAGAGTACCATCTGCCTGGCTGGAGCCATTGTTT +
Preference number: 6 (lower is better)
Translates to: SAATTSSFSSTG*RVPSAWLEPLF
Trigger: AAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGAGGAGGTGGTGGCAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS CAA 72 bp TGTATTTGTGGGGATCCAAAGTTGATGGCCTTCGTCTaGCCCCCGCAGTGGCAGCAAACGGTCCACAGGTAC +
Preference number: 6 (lower is better)
Translates to: CICGDPKLMAFV*PPQWQQTVHRY
Trigger: GTACCTGTGGACCGTTTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CAA 72 bp ATTGGAGCTGCTGGCTGTATTTGTGGGGATCCAAAGTaGATGGCCTTCGTCTTGCCCCCGCAGTGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: IGAAGCICGDPK*MAFVLPPQWQQ
Trigger: TTGCTGCCACTGCGGGGGCAAGACGAAGGCCATCAACTTTGGATCCCCACAAATACAGCCAGCAGCTCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 72 bp AAGACTAACACAACCAGGACTCTGCCAGTCAGTGTCTaGGCGGATATCATCACCCCTGCCCAGTCCTTCACA +
Preference number: 6 (lower is better)
Translates to: KTNTTRTLPVSV*ADIITPAQSFT
Trigger: TGTGAAGGACTGGGCAGGGGTGATGATATCCGCCCAGACACTGACTGGCAGAGTCCTGGTTGTGTTAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
ENSMUST00000226051.2
CDS CCA 72 bp AAGCAGAGGTCCCTTGGACTCTTAGGAGTGCAGCCCTaGTGCTACAGATTGGAGCTGCTGGCTGTATTTGTG +
Preference number: 6 (lower is better)
Translates to: KQRSLGLLGVQP*CYRLELLAVFV
Trigger: CACAAATACAGCCAGCAGCTCCAATCTGTAGCACCAGGGCTGCACTCCTAAGAGTCCAAGGGACCTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 72 bp AGTGCCAAAAGGGGGCTTAGTGAAGCAGAGGTCCCTTaGACTCTTAGGAGTGCAGCCCTGGTGCTACAGATT +
Preference number: 6 (lower is better)
Translates to: SAKRGLSEAEVP*TLRSAALVLQI
Trigger: AATCTGTAGCACCAGGGCTGCACTCCTAAGAGTCCAAGGGACCTCTGCTTCACTAAGCCCCCTTTTGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS GCA 72 bp CATGAAGCACAAACCCTGCTGCAAGCCACCAGTGACTaGCAGAAGTTCTCTGGTTCTTCTTTCTCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: HEAQTLLQATSD*QKFSGSSFSGA
Trigger: GGCTCCTGAGAAAGAAGAACCAGAGAACTTCTGGCAGTCACTGGTGGCTTGCAGCAGGGTTTGTGCTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212576.2
CDS CCA 72 bp TGGCGGCTGCTCATCTTCAACTGGCTTGGGCACGTGTaGAGAATTGGGAGTCGCATTCTTGTGCATAAATGG +
Preference number: 6 (lower is better)
Translates to: WRLLIFNWLGHV*RIGSRILVHKW
Trigger: CCATTTATGCACAAGAATGCGACTCCCAATTCTCCACACGTGCCCAAGCCAGTTGAAGATGAGCAGCCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000100831.11
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225471.2
CDS CCA 72 bp GCTAGGAGTGTGCACCTCTGTGGTGCTGCTGCTGGGTaGGTGATGGTATACCAGAATTTTACTGGGGATCAT +
Preference number: 6 (lower is better)
Translates to: ARSVHLCGAAAG*VMVYQNFTGDH
Trigger: ATGATCCCCAGTAAAATTCTGGTATACCATCACCCACCCAGCAGCAGCACCACAGAGGTGCACACTCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212576.2
CDS CCA 72 bp CCAGAAGTTCTCTGGTTCTTCTTTCTCAGGAGCCGCTaGCCCAGACCTCACTCTGTAGCCTTTGTGGAACAA +
Preference number: 6 (lower is better)
Translates to: PEVLWFFFLRSR*PRPHSVAFVEQ
Trigger: TTGTTCCACAAAGGCTACAGAGTGAGGTCTGGGCCAGCGGCTCCTGAGAAAGAAGAACCAGAGAACTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212576.2
CDS CAA 72 bp CTTGGACTCTTAGGAGTGCAGCCCTGGTGCTACAGATaGGAGCTGCTGGCTGTATTTGTGGGGATCCAAAGT +
Preference number: 6 (lower is better)
Translates to: LGLLGVQPWCYR*ELLAVFVGIQS
Trigger: ACTTTGGATCCCCACAAATACAGCCAGCAGCTCCAATCTGTAGCACCAGGGCTGCACTCCTAAGAGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190339.2
CDS CCA 72 bp TCTTTTTCGTCCACTGGCTTGAGAGTACCATCTGCCTaGCTGGAGCCATTGTTTATCTTCTGGGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SFSSTGLRVPSA*LEPLFIFWASF
Trigger: GAAGGAGGCCCAGAAGATAAACAATGGCTCCAGCCAGGCAGATGGTACTCTCAAGCCAGTGGACGAAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENSMUST00000145596.3
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
CDS TCA 72 bp AGCCCCCGTATTTCTTGCGGTTTCCTATTAACTCTATaGTTTCAGGGACGTAGCTGGCAAACATGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: SPRISCGFLLTL*FQGRSWQTWPV
Trigger: GACTGGCCATGTTTGCCAGCTACGTCCCTGAAATCATAGAGTTAATAGGAAACCGCAAGAAATACGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 30 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000212576.2
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
ENSMUST00000226051.2
CDS GCA 72 bp GCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTAGATGGACATCTTGGG +
Preference number: 6 (lower is better)
Translates to: AVTLRTSAIKTT*SSHSLVDGHLG
Trigger: CCCAAGATGTCCATCTACAAGAGAATGAGACGAGCATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074983.13
ENSMUST00000179836.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000223655.2
ENSMUST00000224232.2
ENSMUST00000225556.2
CDS GCA 72 bp GCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTAGATGGACATCTTGGC +
Preference number: 6 (lower is better)
Translates to: AVTLRTSAIKTT*SSHSLVDGHLG
Trigger: GCCAAGATGTCCATCTACAAGAGAATGAGACGAGCATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172099.9
CDS GCA 72 bp TTAAAAATCTCAAGCCCCATGAAGCACAAACCCTGCTaGAAGCCACCAGTGACTGCCAGAAGTTCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: LKISSPMKHKPC*KPPVTARSSLV
Trigger: AACCAGAGAACTTCTGGCAGTCACTGGTGGCTTGCAGCAGGGTTTGTGCTTCATGGGGCTTGAGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212576.2
CDS CAA 72 bp ATTCTGCTCCGTGAACGGCTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATCAGGAGCTTAAGCTTC +
Preference number: 6 (lower is better)
Translates to: ILLRERLSLLAD*YSMAIIRSLSF
Trigger: GAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGTTCACGGAGCAGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000172099.9
CDS CAA 72 bp ATTCGCTTTCGGCTTCGGCTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATCAGGAGCTTAAGCTTC +
Preference number: 6 (lower is better)
Translates to: IRFRLRLSLLAD*YSMAIIRSLSF
Trigger: GAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAAGCCGAAAGCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224468.2
ENSMUST00000224812.2
CDS GCA 72 bp GCAGTCACGCTCAGAACGTCCGCAATCAAAACAACATaGTCGTCTCATTCTCTTGTAGATGGACATCTTGGA +
Preference number: 6 (lower is better)
Translates to: AVTLRTSAIKTT*SSHSLVDGHLG
Trigger: TCCAAGATGTCCATCTACAAGAGAATGAGACGAGCATGTTGTTTTGATTGCGGACGTTCTGAGCGTGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224077.2
ENSMUST00000224468.2
CDS CCA 72 bp GTGTGGAGAATTGGGAGTCGCATTCTTGTGCATAAATaGGTCTTTGTGATAGCGGGCTCTAGCTTCAACCTT +
Preference number: 6 (lower is better)
Translates to: VWRIGSRILVHK*VFVIAGSSFNL
Trigger: AAGGTTGAAGCTAGAGCCCGCTATCACAAAGACCCATTTATGCACAAGAATGCGACTCCCAATTCTCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000100831.11
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225471.2
CDS GCA 72 bp GAAGAAGACCATGAAGAGGCGTCCAAGTGTGGTTTTTaGATAAACGTCCCCATAACCCACTGTAGACATTGT +
Preference number: 6 (lower is better)
Translates to: EEDHEEASKCGF*INVPITHCRHC
Trigger: ACAATGTCTACAGTGGGTTATGGGGACGTTTATGCAAAAACCACACTTGGACGCCTCTTCATGGTCTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 32 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000212576.2
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
ENSMUST00000226051.2
CDS CAA 90 bp AGAGTAATGTGTCCACAGACTACAATGTGCTTTCTGCCTCCATGTTaGTTAAAAGTCCCGCCGAATTTATTCCGATTCAGGATGAGAGCA +
Preference number: 6 (lower is better)
Translates to: RVMCPQTTMCFLPPC*LKVPPNLFRFRMRA
Trigger: TGCTCTCATCCTGAATCGGAATAAATTCGGCGGGACTTTTAACAAACATGGAGGCAGAAAGCACATTGTAGTCTGTGGACACATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163322.3
ENSMUST00000224285.2
CDS CAA 90 bp TTAATTAATATTCTGCTCCGTGAACGGCTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATCAGGAGCTTAAGCTTCACAAAACAC +
Preference number: 6 (lower is better)
Translates to: LINILLRERLSLLAD*YSMAIIRSLSFTKH
Trigger: GTGTTTTGTGAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGTTCACGGAGCAGAATATTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000172099.9
CDS CAA 90 bp TTAATTAATATTCGCTTTCGGCTTCGGCTCTCTCTGTTGGCAGACTaGTACTCAATGGCTATCATCAGGAGCTTAAGCTTCACAAAACAC +
Preference number: 6 (lower is better)
Translates to: LINIRFRLRLSLLAD*YSMAIIRSLSFTKH
Trigger: GTGTTTTGTGAAGCTTAAGCTCCTGATGATAGCCATTGAGTACAAGTCTGCCAACAGAGAGAGCCGAAGCCGAAAGCGAATATTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224468.2
ENSMUST00000224812.2
CDS CAA 72 bp CACGTGCTGATAAATATGGAGAGCAGATTCACCAGCTaGATGGAGTTACTTGTTTTAAGGATATTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: HVLINMESRFTS*MELLVLRIFRN
Trigger: GTTTCTGAATATCCTTAAAACAAGTAACTCCATCAAGCTGGTGAATCTGCTCTCCATATTTATCAGCACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 32 transcripts:
ENSMUST00000065788.15
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000112423.10
ENSMUST00000145596.3
ENSMUST00000163322.3
ENSMUST00000172099.9
ENSMUST00000177634.8
ENSMUST00000179097.8
ENSMUST00000179836.8
ENSMUST00000188210.8
ENSMUST00000188285.7
ENSMUST00000188991.7
ENSMUST00000190044.7
ENSMUST00000190985.8
ENSMUST00000212576.2
ENSMUST00000223655.2
ENSMUST00000223727.2
ENSMUST00000223749.2
ENSMUST00000224025.2
ENSMUST00000224077.2
ENSMUST00000224232.2
ENSMUST00000224285.2
ENSMUST00000224468.2
ENSMUST00000224787.2
ENSMUST00000224812.2
ENSMUST00000225315.2
ENSMUST00000225431.2
ENSMUST00000225471.2
ENSMUST00000225556.2
ENSMUST00000225794.2
ENSMUST00000226051.2
CDS CCA 72 bp ATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAATATTCTGCTCCGTGAA +
Preference number: 6 (lower is better)
Translates to: MKNPKVPSWILR*FPGLINILLRE
Trigger: TTCACGGAGCAGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074983.13
ENSMUST00000100831.11
ENSMUST00000172099.9
CDS CCA 72 bp ATGAAAAATCCTAAAGTACCTTCTTGGATCTTAAGGTaGTTCCCAGGGTTAATTAATATTCGCTTTCGGCTT +
Preference number: 6 (lower is better)
Translates to: MKNPKVPSWILR*FPGLINIRFRL
Trigger: AAGCCGAAAGCGAATATTAATTAACCCTGGGAACCACCTTAAGATCCAAGAAGGTACTTTAGGATTTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000145596.3
ENSMUST00000188285.7
ENSMUST00000223655.2
ENSMUST00000224077.2
ENSMUST00000224468.2
ENSMUST00000224812.2