RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036760

Ensembl transcript IDs: ENSMUST00000044624.8

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGAGGCTCCCATCCCACCCCACCCACACTTCAGTACCAGGCCTCTaGGATCCACAGACACCTGGCTCGGAGATCCAGTCTTGCAGCTTT +
Preference number: 1 (lower is better)
Translates to: LRLPSHPTHTSVPGL*DPQTPGSEIQSCSF
Trigger: AAAGCTGCAAGACTGGATCTCCGAGCCAGGTGTCTGTGGATCCCAGAGGCCTGGTACTGAAGTGTGGGTGGGGTGGGATGGGAGCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp GGAGATCCAGTCTTGCAGCTTTTCGAAACCTTGTCAGCCACCTGCTaGACGGAAGTGCTCTGGCTGCCCTCCTACCCACCACCCACACCA +
Preference number: 1 (lower is better)
Translates to: GDPVLQLFETLSATC*TEVLWLPSYPPPTP
Trigger: TGGTGTGGGTGGTGGGTAGGAGGGCAGCCAGAGCACTTCCGTTCAGCAGGTGGCTGACAAGGTTTCGAAAAGCTGCAAGACTGGATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp ACAGGAGTGCAGATGACTCTGGAGTTGGGCAGGGATCGCTGGTGTTaGCTCTTCTGGTGCAGGGTTCCGCTAAAGGCCTGCTCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: TGVQMTLELGRDRWC*LFWCRVPLKACSLC
Trigger: ACACAGAGAGCAGGCCTTTAGCGGAACCCTGCACCAGAAGAGGCAACACCAGCGATCCCTGCCCAACTCCAGAGTCATCTGCACTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp CCCCACCCACACTTCAGTACCAGGCCTCTGGGATCCACAGACACCTaGCTCGGAGATCCAGTCTTGCAGCTTTTCGAAACCTTGTCAGCC +
Preference number: 1 (lower is better)
Translates to: PHPHFSTRPLGSTDT*LGDPVLQLFETLSA
Trigger: GGCTGACAAGGTTTCGAAAAGCTGCAAGACTGGATCTCCGAGCCAGGTGTCTGTGGATCCCAGAGGCCTGGTACTGAAGTGTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp TCCCGTGCAGGCAGAAGCCATTTTCTGCCCTGTACATGGGTCTGCTaGCCATGCCAGAGAACTCACTACCGTTGGTCCTGGGTGTGTCCT +
Preference number: 1 (lower is better)
Translates to: SRAGRSHFLPCTWVC*PCQRTHYRWSWVCP
Trigger: AGGACACACCCAGGACCAACGGTAGTGAGTTCTCTGGCATGGCCAGCAGACCCATGTACAGGGCAGAAAATGGCTTCTGCCTGCACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp AGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCCTGTACATaGGTCTGCTGGCCATGCCAGAGAACTCACTACCGTTGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: SPLSRAGRSHFLPCT*VCWPCQRTHYRWSW
Trigger: CCAGGACCAACGGTAGTGAGTTCTCTGGCATGGCCAGCAGACCCATGTACAGGGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp CTCCCTCCTCTCCCTAAGGCATGCCCTTGTATCACTTTCTGTGTTTaGGGCTCCCATCCCACCCCACCCACACTTCAGTACCAGGCCTCT +
Preference number: 1 (lower is better)
Translates to: LPPLPKACPCITFCV*GSHPTPPTLQYQAS
Trigger: AGAGGCCTGGTACTGAAGTGTGGGTGGGGTGGGATGGGAGCCTCAAACACAGAAAGTGATACAAGGGCATGCCTTAGGGAGAGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp TTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCCTGTACATGGGTCTaGTGGCCATGCCAGAGAACTCACTACCGTTGGTCCTGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: LSRAGRSHFLPCTWV*WPCQRTHYRWSWVC
Trigger: ACACACCCAGGACCAACGGTAGTGAGTTCTCTGGCATGGCCAGCAGACCCATGTACAGGGCAGAAAATGGCTTCTGCCTGCACGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp GGAGATTGTGTGGTGGTCATCACCACTCATGAGGTTGCTGCTAGGTaGCAAGATGGCCCAACAGGTTTGCAGGCAAGGGACCCTACAAGG +
Preference number: 1 (lower is better)
Translates to: GDCVVVITTHEVAAR*QDGPTGLQARDPTR
Trigger: CCTTGTAGGGTCCCTTGCCTGCAAACCTGTTGGGCCATCTTGGCACCTAGCAGCAACCTCATGAGTGGTGATGACCACCACACAATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp AGGCTGAGCCTATGTCCCTCTGACTTGACTCCTGAGCCTAATGCTTaGCCCTGTGAAGACACCGAGCAGGATCTGTCCTCCACTGTAGGA +
Preference number: 1 (lower is better)
Translates to: RLSLCPSDLTPEPNA*PCEDTEQDLSSTVG
Trigger: TCCTACAGTGGAGGACAGATCCTGCTCGGTGTCTTCACAGGGCCAAGCATTAGGCTCAGGAGTCAAGTCAGAGGGACATAGGCTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp ATTTGTGAAGGTGCTCTCTCCCGAAGGCAGAGCAGGCAGCGACGATaGATACAGGACACACACAGGAGTGCAGATGACTCTGGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: ICEGALSRRQSRQRR*IQDTHRSADDSGVG
Trigger: CCCAACTCCAGAGTCATCTGCACTCCTGTGTGTGTCCTGTATTCATCGTCGCTGCCTGCTCTGCCTTCGGGAGAGAGCACCTTCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp GTCAGTCAAAGACTTCAGTTGGCCATCCTCCCAGCTCTGTCTTGGTaGTCCTGTTCTCACACCTGTCCTAGGAAAGCCACCCCAGAGAGA +
Preference number: 1 (lower is better)
Translates to: VSQRLQLAILPALSW*SCSHTCPRKATPER
Trigger: TCTCTCTGGGGTGGCTTTCCTAGGACAGGTGTGAGAACAGGAGCACCAAGACAGAGCTGGGAGGATGGCCAACTGAAGTCTTTGACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp GAAAGCATCCATGCCTTGCCACCAACGTGCCCAGCCCTGGTCAGCTaGTTAAGGAAAGAAAGCCAGAACACAGTGGGAACATGCCAGAGA +
Preference number: 1 (lower is better)
Translates to: ESIHALPPTCPALVS*LRKESQNTVGTCQR
Trigger: TCTCTGGCATGTTCCCACTGTGTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAAGGCATGGATGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp GGAAGGAATCCATGCTTCATGCTCAGGTGCGAGCTTCAGAGAGGATaGGCCTCTATTTTCCCTTTGGACAGCTCTGCCTGGCTGGAAAGG +
Preference number: 1 (lower is better)
Translates to: GRNPCFMLRCELQRG*ASIFPLDSSAWLER
Trigger: CCTTTCCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGGCCCATCCTCTCTGAAGCTCGCACCTGAGCATGAAGCATGGATTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp GTAGTCAGTCAAAGACTTCAGTTGGCCATCCTCCCAGCTCTGTCTTaGTGCTCCTGTTCTCACACCTGTCCTAGGAAAGCCACCCCAGAG +
Preference number: 1 (lower is better)
Translates to: VVSQRLQLAILPALS*CSCSHTCPRKATPE
Trigger: CTCTGGGGTGGCTTTCCTAGGACAGGTGTGAGAACAGGAGCACCAAGACAGAGCTGGGAGGATGGCCAACTGAAGTCTTTGACTGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp CAAAGAGGTCAGGACTCAAGAGCAACGGGAAGCTACAAAGCCAAATaGACCAAGTTCACTCAGGGCTGTCCCTCTCCTCCCACATCCCTC +
Preference number: 1 (lower is better)
Translates to: QRGQDSRATGSYKAK*TKFTQGCPSPPTSL
Trigger: GAGGGATGTGGGAGGAGAGGGACAGCCCTGAGTGAACTTGGTTCATTTGGCTTTGTAGCTTCCCGTTGCTCTTGAGTCCTGACCTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp TCGCGCGTACAGCACGACTTGCTTGGTGTTTCATCTGTACAGCGCTaGACCAGAATGGCTCAGGAGTTACAGTTACAGTTTGGTCCCCCA +
Preference number: 1 (lower is better)
Translates to: SRVQHDLLGVSSVQR*TRMAQELQLQFGPP
Trigger: TGGGGGACCAAACTGTAACTGTAACTCCTGAGCCATTCTGGTGCAGCGCTGTACAGATGAAACACCAAGCAAGTCGTGCTGTACGCGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp TGCTCAGGTGCGAGCTTCAGAGAGGATGGGCCTCTATTTTCCCTTTaGACAGCTCTGCCTGGCTGGAAAGGCCGGAAAGAAATGAAACCA +
Preference number: 1 (lower is better)
Translates to: CSGASFREDGPLFSL*TALPGWKGRKEMKP
Trigger: TGGTTTCATTTCTTTCCGGCCTTTCCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGGCCCATCCTCTCTGAAGCTCGCACCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp GAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGCATCCATaGACGCCTCTCTTGAAGATGCAGTTAGGTCCCCTAACAGAGGAA +
Preference number: 1 (lower is better)
Translates to: EIRSLLGLHSETQHP*TPLLKMQLGPLTEE
Trigger: TTCCTCTGTTAGGGGACCTAACTGCATCTTCAAGAGAGGCGTCCATGGATGCTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp GCCCAAGAATCTGGGTGCTTGGCCACTCAGGTGGCTGCCATTGTGTaGAGGAAGAGAAGACTGCTTTGGTCTCCAAAATATGAACACGGG +
Preference number: 1 (lower is better)
Translates to: AQESGCLATQVAAIV*RKRRLLWSPKYEHG
Trigger: CCCGTGTTCATATTTTGGAGACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAGTGGCCAAGCACCCAGATTCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp AACTCTGGTGGGGAGAAAGGAAGGAATCCATGCTTCATGCTCAGGTaGGAGCTTCAGAGAGGATGGGCCTCTATTTTCCCTTTGGACAGC +
Preference number: 1 (lower is better)
Translates to: NSGGEKGRNPCFMLR*ELQRGWASIFPLDS
Trigger: GCTGTCCAAAGGGAAAATAGAGGCCCATCCTCTCTGAAGCTCGCACCTGAGCATGAAGCATGGATTCCTTCCTTTCTCCCCACCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp ATGACTTCCAAGAGCCCAGTAAGGCAAGGCAGAAGAACCAGTCCCTaGCCTACCACTCTTCCTCATCTAGGATGCCTTCTGGTCCTGATA +
Preference number: 1 (lower is better)
Translates to: MTSKSPVRQGRRTSP*PTTLPHLGCLLVLI
Trigger: TATCAGGACCAGAAGGCATCCTAGATGAGGAAGAGTGGTAGGGCAGGGACTGGTTCTTCTGCCTTGCCTTACTGGGCTCTTGGAAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp ATTGACTTTCCAGAGGAGTCCTGGATGCTCCTGGTTTCAGCCCAATaGCACACATGCTTGGGACTGGTGGCATTTGGATGCTGTGTCCTT +
Preference number: 1 (lower is better)
Translates to: IDFPEESWMLLVSAQ*HTCLGLVAFGCCVL
Trigger: AAGGACACAGCATCCAAATGCCACCAGTCCCAAGCATGTGTGCCATTGGGCTGAAACCAGGAGCATCCAGGACTCCTCTGGAAAGTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp AGGGGTGTAGCATTAAGTGCATGCATTGACTTTCCAGAGGAGTCCTaGATGCTCCTGGTTTCAGCCCAATGGCACACATGCTTGGGACTG +
Preference number: 1 (lower is better)
Translates to: RGVALSACIDFPEES*MLLVSAQWHTCLGL
Trigger: CAGTCCCAAGCATGTGTGCCATTGGGCTGAAACCAGGAGCATCCAGGACTCCTCTGGAAAGTCAATGCATGCACTTAATGCTACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp TTGACTCCTCCCTGCTCTCACCCCAAGAGAGCACATCAGTGGATGTaGCCAGAGAACAATATCACCAGGTCCTACGCTAAGGAACAAATC +
Preference number: 1 (lower is better)
Translates to: LTPPCSHPKRAHQWM*PENNITRSYAKEQI
Trigger: GATTTGTTCCTTAGCGTAGGACCTGGTGATATTGTTCTCTGGGCACATCCACTGATGTGCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp AACTGCTCTCCCCTCTTCAGAACCACTCCCCTGCTATGTGAGTGGTaGATATATCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: NCSPLFRTTPLLCEW*IYLGISSAACASLA
Trigger: AGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGATATATCCACCACTCACATAGCAGGGGAGTGGTTCTGAAGAGGGGAGAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp CCTGGGACAGAATCCCTTCTGCAAACAACCTGGCATGAGGTCTGTTaGAGGGGTTTGGTTAACTGGAGGGAAGGGTACAACAATCACTTG +
Preference number: 1 (lower is better)
Translates to: PGTESLLQTTWHEVC*RGLVNWREGYNNHL
Trigger: CAAGTGATTGTTGTACCCTTCCCTCCAGTTAACCAAACCCCTTCAACAGACCTCATGCCAGGTTGTTTGCAGAAGGGATTCTGTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp ATAAGGCTGACCCATCGGGCATTTGCTTCTCAGTGTGTTCACCCATaGGAAGCAAACACACAGGAACACAGAGAAGGATCCCATAGGGGA +
Preference number: 1 (lower is better)
Translates to: IRLTHRAFASQCVHP*EANTQEHREGSHRG
Trigger: TCCCCTATGGGATCCTTCTCTGTGTTCCTGTGTGTTTGCTTCTCATGGGTGAACACACTGAGAAGCAAATGCCCGATGGGTCAGCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp TCCCATATGGTAAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTaGTCTCACCCCAAGAGAGCACATCAGTGGATGTGCCCAGAGAAC +
Preference number: 1 (lower is better)
Translates to: SHMVKWRVLQNLTPP*SHPKRAHQWMCPEN
Trigger: GTTCTCTGGGCACATCCACTGATGTGCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTTACCATATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp CACATACAAGGCCCAAGAATCTGGGTGCTTGGCCACTCAGGTGGCTaGCATTGTGTGAAGGAAGAGAAGACTGCTTTGGTCTCCAAAATA +
Preference number: 1 (lower is better)
Translates to: HIQGPRIWVLGHSGG*HCVKEEKTALVSKI
Trigger: TATTTTGGAGACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAGTGGCCAAGCACCCAGATTCTTGGGCCTTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp TGCAGCATAGAGCTCTACCCCAATCCTTCCAGAACCATCCTTGGCTaGGATGGCAGAATTGAGCATTCCTGTGCTCTAAGTCATTCTCAG +
Preference number: 1 (lower is better)
Translates to: CSIELYPNPSRTILG*DGRIEHSCALSHSQ
Trigger: CTGAGAATGACTTAGAGCACAGGAATGCTCAATTCTGCCATCCCAGCCAAGGATGGTTCTGGAAGGATTGGGGTAGAGCTCTATGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp GCACCTTCTTCCTGGGATGGGGTACCTTTAAGGATCCAAATGGGATaGACACTAGAAATCAGCAAGCCCAGAGCTCTGGGTTACTCCATA +
Preference number: 1 (lower is better)
Translates to: APSSWDGVPLRIQMG*TLEISKPRALGYSI
Trigger: TATGGAGTAACCCAGAGCTCTGGGCTTGCTGATTTCTAGTGTTCATCCCATTTGGATCCTTAAAGGTACCCCATCCCAGGAAGAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp TTACAGTTACAGTTTGGTCCCCCACAAAGCAACAGATGGTTGATGTaGAGGGAGGCCTCTTGTTGGGCCAAGTGGACATACATTTCCAGG +
Preference number: 1 (lower is better)
Translates to: LQLQFGPPQSNRWLM*REASCWAKWTYISR
Trigger: CCTGGAAATGTATGTCCACTTGGCCCAACAAGAGGCCTCCCTTCACATCAACCATCTGTTGCTTTGTGGGGGACCAAACTGTAACTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp GCAGAGCTCTTCAACATATTAGTTGTCTCCATGTTGAAGGTAGGGTaGGGGGAAGATCAAGCCCACACCTCCCACTATCCACCTTTGTGT +
Preference number: 1 (lower is better)
Translates to: AELFNILVVSMLKVG*GEDQAHTSHYPPLC
Trigger: ACACAAAGGTGGATAGTGGGAGGTGTGGGCTTGATCTTCCCCTCACCCTACCTTCAACATGGAGACAACTAATATGTTGAAGAGCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp ATTTGGTTGGTGGAGGTTTCTGATAAGGCAGAAGATGGGCTGAGATaGCCTCACAAGGGCCTTCCCAACCCAAAACCAGCTGTCAAAATG +
Preference number: 1 (lower is better)
Translates to: IWLVEVSDKAEDGLR*PHKGLPNPKPAVKM
Trigger: CATTTTGACAGCTGGTTTTGGGTTGGGAAGGCCCTTGTGAGGTCATCTCAGCCCATCTTCTGCCTTATCAGAAACCTCCACCAACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp AATATGAACACGGGAATCTTTACAAGCTCTGTGCAACAGGATAAATaGAAGCATCCATGCCTTGCCACCAACGTGCCCAGCCCTGGTCAG +
Preference number: 1 (lower is better)
Translates to: NMNTGIFTSSVQQDK*KHPCLATNVPSPGQ
Trigger: CTGACCAGGGCTGGGCACGTTGGTGGCAAGGCATGGATGCTTTCATTTATCCTGTTGCACAGAGCTTGTAAAGATTCCCGTGTTCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp CGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTaGCTTTCCAGAGGAGTCCTGGATGCTCCTGGTTTCAGCCCAATG +
Preference number: 1 (lower is better)
Translates to: RREYFNKGCSIKCMH*LSRGVLDAPGFSPM
Trigger: CATTGGGCTGAAACCAGGAGCATCCAGGACTCCTCTGGAAAGTCAATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp CTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATaGATTGACTTTCCAGAGGAGTCCTGGATGCTCCTGGTTTCAGCC +
Preference number: 1 (lower is better)
Translates to: LDEGNISTRGVALSA*IDFPEESWMLLVSA
Trigger: GGCTGAAACCAGGAGCATCCAGGACTCCTCTGGAAAGTCAATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp GCTTGGCCACTCAGGTGGCTGCCATTGTGTGAAGGAAGAGAAGACTaGTTTGGTCTCCAAAATATGAACACGGGAATCTTTACAAGCTCT +
Preference number: 1 (lower is better)
Translates to: AWPLRWLPLCEGRED*FGLQNMNTGIFTSS
Trigger: AGAGCTTGTAAAGATTCCCGTGTTCATATTTTGGAGACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAGTGGCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp GGGAGAACAGGAGCTAGGATGTCAAGTGACTTTCATTCAGTGGCATaGTACTATGGATCCCAGAGCTACCTCATCACCTTAGTCCCTTAT +
Preference number: 1 (lower is better)
Translates to: GRTGARMSSDFHSVA*YYGSQSYLITLVPY
Trigger: ATAAGGGACTAAGGTGATGAGGTAGCTCTGGGATCCATAGTAGCATGCCACTGAATGAAAGTCACTTGACATCCTAGCTCCTGTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp GAGAGCCCTGTGCAGGGCATTCCACACAACAACATCTCAAACAAGTaGACTGAGAAAGACCTCGAAGTTGGAATATGTCAACTTTGGCCA +
Preference number: 1 (lower is better)
Translates to: ESPVQGIPHNNISNK*TEKDLEVGICQLWP
Trigger: TGGCCAAAGTTGACATATTCCAACTTCGAGGTCTTTCTCAGTTCACTTGTTTGAGATGTTGTTGTGTGGAATGCCCTGCACAGGGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp TGGGGGCTAATAGAGAATCTCAAAACCCAGAGAGAGAAGTTCTCTTaGTGTTCAAAGTCTAACAGGCAGGTGGGTGAGACAGCACCTTCT +
Preference number: 1 (lower is better)
Translates to: WGLIENLKTQREKFS*CSKSNRQVGETAPS
Trigger: AGAAGGTGCTGTCTCACCCACCTGCCTGTTAGACTTTGAACATCAAGAGAACTTCTCTCTCTGGGTTTTGAGATTCTCTATTAGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp TCTGGGAAGAAAAGATGTACCTGTCATTCGATCCTTCCCACACAATaGTCACTGTGTGACCACTTCACACAGATGCATGAATGGGAAGCT +
Preference number: 1 (lower is better)
Translates to: SGKKRCTCHSILPTQ*SLCDHFTQMHEWEA
Trigger: AGCTTCCCATTCATGCATCTGTGTGAAGTGGTCACACAGTGACCATTGTGTGGGAAGGATCGAATGACAGGTACATCTTTTCTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp TATGTCAACTTTGGCCAAGAGAGTCTAAGGTTCACAGACTCCTTTTaGAGGTCCCGTGTCCTAGACGAAGGGAATATTTCAACAAGGGGT +
Preference number: 1 (lower is better)
Translates to: YVNFGQESLRFTDSF*RSRVLDEGNISTRG
Trigger: ACCCCTTGTTGAAATATTCCCTTCGTCTAGGACACGGGACCTTCAAAAGGAGTCTGTGAACCTTAGACTCTCTTGGCCAAAGTTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp CCCTGTGCAGGGCATTCCACACAACAACATCTCAAACAAGTGAACTaGGAAAGACCTCGAAGTTGGAATATGTCAACTTTGGCCAAGAGA +
Preference number: 1 (lower is better)
Translates to: PCAGHSTQQHLKQVN*ERPRSWNMSTLAKR
Trigger: TCTCTTGGCCAAAGTTGACATATTCCAACTTCGAGGTCTTTCTCAGTTCACTTGTTTGAGATGTTGTTGTGTGGAATGCCCTGCACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp TTCGGCTGGTTTTGTTGTCATGAGGTACACAGATACACACTGGGCTaGGGTTATGATTGTACAGATATGAGGGGGAATGGTCTACCATAT +
Preference number: 1 (lower is better)
Translates to: FGWFCCHEVHRYTLG*GYDCTDMRGNGLPY
Trigger: ATATGGTAGACCATTCCCCCTCATATCTGTACAATCATAACCTCAGCCCAGTGTGTATCTGTGTACCTCATGACAACAAAACCAGCCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp AGAATAGTGATTGCTTCTATTCTCTGGACAGACTTGAGAGCCCTGTaGAGGGCATTCCACACAACAACATCTCAAACAAGTGAACTGAGA +
Preference number: 1 (lower is better)
Translates to: RIVIASILWTDLRAL*RAFHTTTSQTSELR
Trigger: TCTCAGTTCACTTGTTTGAGATGTTGTTGTGTGGAATGCCCTGCACAGGGCTCTCAAGTCTGTCCAGAGAATAGAAGCAATCACTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp CATAAGTTGACACTAGTGGCTTTACGACTACTCCTCTGTGATCTCTaGTTTCTTGTGTCAATGATGCATACCAGTTCCACAAAGTGCATG +
Preference number: 1 (lower is better)
Translates to: HKLTLVALRLLLCDL*FLVSMMHTSSTKCM
Trigger: CATGCACTTTGTGGAACTGGTATGCATCATTGACACAAGAAAGCAGAGATCACAGAGGAGTAGTCGTAAAGCCACTAGTGTCAACTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp CATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTaGTTCTGGCCTGGCCATTCCATCTTCTATAGAGGAAATGAGAAA +
Preference number: 1 (lower is better)
Translates to: HGFHLFCTSVYLRDT*FWPGHSIFYRGNEK
Trigger: TTTCTCATTTCCTCTATAGAAGATGGAATGGCCAGGCCAGAAGCAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp AATAAAATAGATACTCTTGGGTCCCACCTATTTCCCTGTTTACCTTaGCATCTCCAGCTGCAGGGAAAACTTCTGGAACTAGAAATGCTG +
Preference number: 1 (lower is better)
Translates to: NKIDTLGSHLFPCLP*HLQLQGKLLELEML
Trigger: CAGCATTTCTAGTTCCAGAAGTTTTCCCTGCAGCTGGAGATGTCAAGGTAAACAGGGAAATAGGTGGGACCCAAGAGTATCTATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 90 bp GAAGCAATGAAAACAATTGTCAAGGCATGCTCTAGTTCCTATCTCTaGTCCTTAAACCTACAGCAACTGCTCACACATCTTAGACAGCAT +
Preference number: 1 (lower is better)
Translates to: EAMKTIVKACSSSYL*SLNLQQLLTHLRQH
Trigger: ATGCTGTCTAAGATGTGTGAGCAGTTGCTGTAGGTTTAAGGAGCAGAGATAGGAACTAGAGCATGCCTTGACAATTGTTTTCATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp GAGAACAATATCACCAGGTCCTACGCTAAGGAACAAATCAACCATTaGAGAAGATCCACTTATAGGGACATAAGCCAAGACTCATTCCTT +
Preference number: 1 (lower is better)
Translates to: ENNITRSYAKEQINH*RRSTYRDISQDSFL
Trigger: AAGGAATGAGTCTTGGCTTATGTCCCTATAAGTGGATCTTCTCCAATGGTTGATTTGTTCCTTAGCGTAGGACCTGGTGATATTGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp TGCCATTGTGTGAAGGAAGAGAAGACTGCTTTGGTCTCCAAAATATaGACACGGGAATCTTTACAAGCTCTGTGCAACAGGATAAATGAA +
Preference number: 1 (lower is better)
Translates to: CHCVKEEKTALVSKI*TRESLQALCNRINE
Trigger: TTCATTTATCCTGTTGCACAGAGCTTGTAAAGATTCCCGTGTTCATATTTTGGAGACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 90 bp ATCTCTGAGGAGCCCTTATCCGTCTACATTCCAGCTGACATAGATTaGCACTGGAATTCAAGATCTGTACAGTTTTCATATCTGAATGAA +
Preference number: 1 (lower is better)
Translates to: ISEEPLSVYIPADID*HWNSRSVQFSYLNE
Trigger: TTCATTCAGATATGAAAACTGTACAGATCTTGAATTCCAGTGCCAATCTATGTCAGCTGGAATGTAGACGGATAAGGGCTCCTCAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 90 bp TGCAAAACATCAACAAAGCAGCTAGGACAACAGCAAAAGGAAGTGTaGAGACCTATATTCTTTACACATGACCTCAGATATGTTGACTTC +
Preference number: 1 (lower is better)
Translates to: CKTSTKQLGQQQKEV*RPIFFTHDLRYVDF
Trigger: GAAGTCAACATATCTGAGGTCATGTGTAAAGAATATAGGTCTTCACACTTCCTTTTGCTGTTGTCCTAGCTGCTTTGTTGATGTTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp GGTCTACCTCTCAGGAAGGGTCACCTGTCAGGGTCACCAGTGGTATaGGAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: GLPLRKGHLSGSPVV*EGVQQKPFVPCRQK
Trigger: CTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTCCAATACCACTGGTGACCCTGACAGGTGACCCTTCCTGAGAGGTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp CCCAGCTGCTCTGGGGATAGGAGAGGGACCAAGAAGCAGGTGTTCTaGTCTCTCCCAGGGCTCCAGAGGTGCAGGGTCTTGTGTCATTGC +
Preference number: 2 (lower is better)
Translates to: PSCSGDRRGTKKQVF*SLPGLQRCRVLCHC
Trigger: GCAATGACACAAGACCCTGCACCTCTGGAGCCCTGGGAGAGACAAGAACACCTGCTTCTTGGTCCCTCTCCTATCCCCAGAGCAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp TGTCAGGGTCACCAGTGGTATTGGAGGGGGTCCAGCAGAAGCCCTTaGTCCCGTGCAGGCAGAAGCCATTTTCTGCCCTGTACATGGGTC +
Preference number: 2 (lower is better)
Translates to: CQGHQWYWRGSSRSP*SRAGRSHFLPCTWV
Trigger: GACCCATGTACAGGGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTCCAATACCACTGGTGACCCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp GACGATGAATACAGGACACACACAGGAGTGCAGATGACTCTGGAGTaGGGCAGGGATCGCTGGTGTTGCCTCTTCTGGTGCAGGGTTCCG +
Preference number: 2 (lower is better)
Translates to: DDEYRTHTGVQMTLE*GRDRWCCLFWCRVP
Trigger: CGGAACCCTGCACCAGAAGAGGCAACACCAGCGATCCCTGCCCAACTCCAGAGTCATCTGCACTCCTGTGTGTGTCCTGTATTCATCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp ACCGAGCAGGATCTGTCCTCCACTGTAGGACTGAGTCAGGACACCTaGGTGTTGGGAAGTCCACCTTCTGGACCCTTCTGGGTAGGAACT +
Preference number: 2 (lower is better)
Translates to: TEQDLSSTVGLSQDT*VLGSPPSGPFWVGT
Trigger: AGTTCCTACCCAGAAGGGTCCAGAAGGTGGACTTCCCAACACCAAGGTGTCCTGACTCAGTCCTACAGTGGAGGACAGATCCTGCTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACCTGCCTCCATGTTGCTaGGCAACAGGGATACCCTCT +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNLPPCC*ATGIPS
Trigger: AGAGGGTATCCCTGTTGCTCAGCAACATGGAGGCAG...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGCTAGGAGACTGCGTATaGAATTGTATGCGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: PRERSEIRSLLGLHSETQLGDCV*NCMREK
Trigger: CTTCTCACGCATACAATTTCATACGCAGTCTCCTAG...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGTCTGTAGACACTCAATaGGTCTCTGAATTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: PRERSEIRSLLGLHSETQSVDTQ*VSELGS
Trigger: TGAGCCCAATTCAGAGACTCATTGAGTGTCTACAGA...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp ACTGGAGGGAAGGGTACAACAATCACTTGGCTAAAAGAAGCTGCCAAGTGCACAAGGAGCCAGTGGAGCTaGCCCTGCTTGGAGCCCCTT +
Preference number: 2 (lower is better)
Translates to: TGGKGTTITWLKEAAKCTRSQWS*PCLEPL
Trigger: AAGGGGCTCCAAGCAGGGGCAGCTCCACTGGCTCCT...TGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACGGGATTCACAGTGTCTaGCCCTCACTGCAGTGTTCA +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNGIHSV*PSLQCS
Trigger: TGAACACTGCAGTGAGGGGCAGACACTGTGAATCCC...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp AAAACTGGGACTCTACTCCACGCAGGTAGAGACTTCACAGAGCTCTCCCCGTCACAGCCACCCAGTCCTTaGGGGAAGAAGAGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: KTGTLLHAGRDFTELSPSQPPSP*GKKRGV
Trigger: AACTCCTCTCTTCTTCCCCCAAGGACTGGGTGGCTG...TGACGGGGAGAGCTCTGTGAAGTCTCTACCTGCGTGGAGTAGAGTCCCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp ATGCTCAGGTGCGAGCTTCAGAGAGGATGGGCCTCTATTTTCCCTTaGGACAGCTCTGCCTGGCTGGAAAGGCCGGAAAGAAATGAAACC +
Preference number: 2 (lower is better)
Translates to: MLRCELQRGWASIFP*DSSAWLERPERNET
Trigger: GGTTTCATTTCTTTCCGGCCTTTCCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGGCCCATCCTCTCTGAAGCTCGCACCTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTAGGGAAGTGAATGCCTaGTCCTTTCCACCTTGTCGC +
Preference number: 2 (lower is better)
Translates to: QEPLEREWPLMSGDEGRIREVNA*SFPPCR
Trigger: GCGACAAGGTGGAAAGGATCAGGCATTCACTTCCCT...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACATTGTCAGCCACCTGCTaGACGGAAGTGCTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITLSATC*TEVLWL
Trigger: CAGCCAGAGCACTTCCGTTCAGCAGGTGGCTGACAA...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp ACTGGAGGGAAGGGTACAACAATCACTTGGCTAAAAGAAGCTGCCAAGTGCACACCCTTTGGACAGCTCTaGCTGGCTGGAAAGGCCGGA +
Preference number: 2 (lower is better)
Translates to: TGGKGTTITWLKEAAKCTPFGQL*LAGKAG
Trigger: TCCGGCCTTTCCAGCCAGGCAGAGCTGTCCAAAGGG...TGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAGGAGCTGCCCCTGCTTaGAGCCCCTTCAACTCTACT +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITGAAPA*SPFNST
Trigger: AGTAGAGTTGAAGGGGCTCCAAGCAGGGGCAGCTCC...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGCCAGCTGACATAGATTaGCACTGGAATTCAAGATCT +
Preference number: 2 (lower is better)
Translates to: PRERSEIRSLLGLHSETQPADID*HWNSRS
Trigger: AGATCTTGAATTCCAGTGCCAATCTATGTCAGCTGG...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACACGACTACTCCTCTGTaGTCTCTGCTTTCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNTTTPL*SLLSCV
Trigger: GACACAAGAAAGCAGAGATCACAGAGGAGTAGTCGT...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTCAGAGGCTCAAGAAGTaGAATGACTTCCAAGAGCCC +
Preference number: 2 (lower is better)
Translates to: QEPLEREWPLMSGDEGRIQRLKK*NDFQEP
Trigger: GGGCTCTTGGAAGTCATTTCACTTCTTGAGCCTCTG...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTCGGAAGTGCTCTGGCTaGCCTCCTACCCACCACCCA +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFRKCSG*PPTHHP
Trigger: TGGGTGGTGGGTAGGAGGGCAGCCAGAGCACTTCCG...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTCCACCTTGTCGCACAACACACCTGCACACAGAAGCGCACACGCTCATATTACCCTCTATTTTCCCTTTaGACAGCTCTGCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: FHLVAQHTCTQKRTRSYYPLFSL*TALPGW
Trigger: CCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGG...GTAATATGAGCGTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGGTTAAAAGTGCTTTGTaGGATGTGCTCAATTTGGCA +
Preference number: 2 (lower is better)
Translates to: PRERSEIRSLLGLHSETQVKSAL*DVLNLA
Trigger: TGCCAAATTGAGCACATCCCACAAAGCACTTTTAAC...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACGGGACTGGTGGCATTTaGATGCTGTGTCCTTTAAGA +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNGTGGI*MLCPLR
Trigger: TCTTAAAGGACACAGCATCCAAATGCCACCAGTCCC...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCAGGGAAGTCCACCTTCTaGACCCTTCTGGGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQAGKSTF*TLLGRN
Trigger: GTTCCTACCCAGAAGGGTCCAGAAGGTGGACTTCCC...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACTTGGAAGAGACAATTTaGTGCCCTTCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNLEETI*CPSLQS
Trigger: GCTTTGGAGGGAAGGGCACCAAATTGTCTCTTCCAA...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACACCTTCTTCCTGGGATaGGGTACCTTTAAGGATCCA +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNTFFLG*GTFKDP
Trigger: TGGATCCTTAAAGGTACCCCATCCCAGGAAGAAGGT...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCGACATAGATTGGCACTaGAATTCAAGATCTGTACAG +
Preference number: 2 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSADIDWH*NSRSVQ
Trigger: CTGTACAGATCTTGAATTCCAGTGCCAATCTATGTC...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp AGTCCACCTTCTGGACCCTTCTGGGTAGGAACTGAGAGTGGATCCTaGGTTCTCTCAGTGCCTCAACACCATGTACAGATCAGAGGTGAT +
Preference number: 2 (lower is better)
Translates to: SPPSGPFWVGTESGS*VLSVPQHHVQIRGD
Trigger: ATCACCTCTGATCTGTACATGGTGTTGAGGCACTGAGAGAACCAAGGATCCACTCTCAGTTCCTACCCAGAAGGGTCCAGAAGGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp AAGGGAGGCCTCTTGTTGGGCCAAGTGGACATACATTTCCAGGAGTaGCTCGGTAAACACTCACATGTAGTTCTCACAAGCACCGTGTGC +
Preference number: 2 (lower is better)
Translates to: KGGLLLGQVDIHFQE*LGKHSHVVLTSTVC
Trigger: GCACACGGTGCTTGTGAGAACTACATGTGAGTGTTTACCGAGCAACTCCTGGAAATGTATGTCCACTTGGCCCAACAAGAGGCCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp TGGTCCCCCACAAAGCAACAGATGGTTGATGTGAAGGGAGGCCTCTaGTTGGGCCAAGTGGACATACATTTCCAGGAGTTGCTCGGTAAA +
Preference number: 2 (lower is better)
Translates to: WSPTKQQMVDVKGGL*LGQVDIHFQELLGK
Trigger: TTTACCGAGCAACTCCTGGAAATGTATGTCCACTTGGCCCAACAAGAGGCCTCCCTTCACATCAACCATCTGTTGCTTTGTGGGGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGCAGCAAAAGGAAGTGTaGAGACCTATATTCTTTACA +
Preference number: 2 (lower is better)
Translates to: PRERSEIRSLLGLHSETQQQKEV*RPIFFT
Trigger: TGTAAAGAATATAGGTCTTCACACTTCCTTTTGCTG...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTCAGTGTGTTCACCCATaGGAAGCAAACACACAGGAA +
Preference number: 2 (lower is better)
Translates to: QEPLEREWPLMSGDEGRIQCVHP*EANTQE
Trigger: TTCCTGTGTGTTTGCTTCTCATGGGTGAACACACTG...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAATGTTGAAGGTAGGGTaGGGGGAAGATCAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITMLKVG*GEDQAH
Trigger: GTGGGCTTGATCTTCCCCTCACCCTACCTTCAACAT...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCAGCCCAATGGCACACATaGTTGGGACTGGTGGCATTT +
Preference number: 2 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQAAQWHT*LGLVAF
Trigger: AAATGCCACCAGTCCCAAGCATGTGTGCCATTGGGC...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTTTCGGCACACCCAGCTaGTCTGGGGATAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFFGTPS*SGDRRG
Trigger: CCCTCTCCTATCCCCAGAGCAGCTGGGTGTGCCGAA...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp AAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTGCTCTCACCCCAAGAGAGCACAGCTCTGCCTGGCTaGAAAGGCCGGAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: KMESPSEFDSSLLSPQESTALPG*KGRKEM
Trigger: CATTTCTTTCCGGCCTTTCCAGCCAGGCAGAGCTGT...GCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCAGATTTCATTTAAACTaGCAGGGTAAACCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSARFHLN*QGKPVV
Trigger: GACTACAGGTTTACCCTGCCAGTTTAAATGAAATCT...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCATTTCCAGAGGAGTCCTaGATGCTCCTGGTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQAFPEES*MLLVSA
Trigger: GGCTGAAACCAGGAGCATCCAGGACTCCTCTGGAAA...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCCTGAGAGTGGATCCTTaGTTCTCTCAGTGCCTCAAC +
Preference number: 2 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLLRVDP*FSQCLN
Trigger: GTTGAGGCACTGAGAGAACCAAGGATCCACTCTCAG...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCTTGTCTATATTCCTCTaGGAAGAAAAGATGTACCTG +
Preference number: 2 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSALSIFL*EEKMYL
Trigger: CAGGTACATCTTTTCTTCCCAGAGGAATATAGACAA...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGTCCCATATGGTAAAATaGAGAGTCCTTCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: PRERSEIRSLLGLHSETQSHMVK*RVLQNL
Trigger: CAAATTCTGAAGGACTCTCCATTTTACCATATGGGA...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACGTTACAGTTACAGTTTaGTCCCCCACAAAGCAACAG +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNVTVTV*SPTKQQ
Trigger: CTGTTGCTTTGTGGGGGACCAAACTGTAACTGTAAC...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp GAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTCACTaGTGTGAAGGGCTAAACATGACAACAGCAGTTGACGGTGTCGAG +
Preference number: 2 (lower is better)
Translates to: EREWPLMSGDEGRIH*CEGLNMTTAVDGVE
Trigger: CTCGACACCGTCAACTGCTGTTGTCATGTTTAGCCCTTCACACAAGTGAATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCATTTCCCTGTTTACCTTaGCATCTCCAGCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQAFPCLP*HLQLQG
Trigger: TCCCTGCAGCTGGAGATGTCAAGGTAAACAGGGAAA...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTTCATTCTTGCTCTCTTaGTACCAAGTCTCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: QEPLEREWPLMSGDEGRISFLLS*YQVSPE
Trigger: TTCTGGGGAGACTTGGTATCAAGAGAGCAAGAATGA...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCACAGGAACTTCCAGTGTaGGAAAAAGGAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQAQELPV*EKGVGG
Trigger: TCCTCCCACTCCTTTTTCGCACACTGGAAGTTCCTG...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GTTGAGCTTGGAAGAGACAATTTGGTGCCCTTCCCTCCAAAGCTGAACTGGCAATTGAAGACCAGTAAGTaGGCTCCTTGTGCGTGCGTA +
Preference number: 2 (lower is better)
Translates to: VELGRDNLVPFPPKLNWQLKTSK*APCACV
Trigger: TACGCACGCACAAGGAGCGCACTTACTGGTCTTCAA...TTGCCAGTTCAGCTTTGGAGGGAAGGGCACCAAATTGTCTCTTCCAAGCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACGAGGGAAAGAGGAGTTaGGACAATGAAACTTACATC +
Preference number: 2 (lower is better)
Translates to: LPPTCPALVSCLRKESQNEGKRS*DNETYI
Trigger: GATGTAAGTTTCATTGTCCCAACTCCTCTTTCCCTC...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TTCCACCTTGTCGCACAACACACCTGCACACAGAAGCGCACACGCTCATATTACGAGGAGTTGGGACAATaGAACTTACATCTGCATGAC +
Preference number: 2 (lower is better)
Translates to: FHLVAQHTCTQKRTRSYYEELGQ*NLHLHD
Trigger: GTCATGCAGATGTAAGTTTCATTGTCCCAACTCCTC...GTAATATGAGCGTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp AAAACTGGGACTCTACTCCACGCAGGTAGAGACTTCACAGAGCTCTCCCCGTCACACCCTGAAGAGAAGTaGATGAGATTTAGACGCTAT +
Preference number: 2 (lower is better)
Translates to: KTGTLLHAGRDFTELSPSHPEEK*MRFRRY
Trigger: ATAGCGTCTAAATCTCATTCACTTCTCTTCAGGGTG...TGACGGGGAGAGCTCTGTGAAGTCTCTACCTGCGTGGAGTAGAGTCCCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCCCTCTAAAACGTTCCTaGGACCAACATGAACTTCTC +
Preference number: 2 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLPLKRS*DQHELL
Trigger: GAGAAGTTCATGTTGGTCTCAGGAACGTTTTAGAGG...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGAGGGTCATCCTTTATTaGGAGCGGGGAGGAATATCT +
Preference number: 2 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGRVILY*ERGGIS
Trigger: AGATATTCCTCCCCGCTCTCAATAAAGGATGACCCT...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTGTAGCATTAAGTGCATaGATTGACTTTCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: QEPLEREWPLMSGDEGRIVALSA*IDFPEE
Trigger: CTCCTCTGGAAAGTCAATGCATGCACTTAATGCTAC...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCAGGGGTTTGGTTAACTaGAGGGAAGGGTACAACAAT +
Preference number: 2 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLRGLVN*REGYNN
Trigger: ATTGTTGTACCCTTCCCTCCAGTTAACCAAACCCCT...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTCCTGGGTGTGTCCTCTaGGATCCACTGGTACCAAGA +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFPGCVL*DPLVPR
Trigger: TCTTGGTACCAGTGGATCCCAGAGGACACACCCAGG...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAGCCTGCTCTCTGTGTTaGACCTGTCATGCAAATGTA +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITACSLC*TCHANV
Trigger: TACATTTGCATGACAGGTCCAACACAGAGAGCAGGC...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACACTAGGAAAGGGTAGTTaGCCTGTTCTTAGGAACCTA +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITLGKGS*PVLRNL
Trigger: TAGGTTCCTAAGAACAGGTCAACTACCCTTTCCTAG...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGGGAATCCATGCTTCATaGTCAGGTGCGAGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLGIHAS*SGASFR
Trigger: TCTGAAGCTCGCACCTGAGCATGAAGCATGGATTCC...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCAACCACTTCACACAGATaGATGAATGGGAAGCTAGCT +
Preference number: 2 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQATTSHR*MNGKLA
Trigger: AGCTAGCTTCCCATTCATGCATCTGTGTGAAGTGGT...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTAGAACTCACTACCGTTaGTCCTGGGTGTGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFRTHYR*SWVCPL
Trigger: CAGAGGACACACCCAGGACCAACGGTAGTGAGTTCT...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTTGTACATGGGTCTGCTaGCCATGCCAGAGAACTCAC +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFCTWVC*PCQRTH
Trigger: GTGAGTTCTCTGGCATGGCCAGCAGACCCATGTACA...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGTCCCCAGAATTGGATTaGAGCCTCCAAAGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLSPELD*SLQRGQ
Trigger: CTGACCTCTTTGGAGGCTCCAATCCAATTCTGGGGA...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGACAATGGTCACTGTGTaGCCACTTCACACAGATGCA +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLTMVTV*PLHTDA
Trigger: TGCATCTGTGTGAAGTGGTCACACAGTGACCATTGT...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAATGCCAGGGATCACATaGGACAGGCATTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITMPGIT*DRHFDF
Trigger: AAAATCAAAATGCCTGTCTCATGTGATCCCTGGCAT...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTTGCTTCATGCTCAGGTaGGAGCTTCAGAGAGGATGG +
Preference number: 2 (lower is better)
Translates to: VLDEGNISTRGVALSACICFMLR*ELQRGW
Trigger: CCATCCTCTCTGAAGCTCGCACCTGAGCATGAAGCA...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTCCAGCTCTGTCTTGGTaGTCCTGTTCTCACACCTGT +
Preference number: 2 (lower is better)
Translates to: VLDEGNISTRGVALSACIPALSW*SCSHTC
Trigger: ACAGGTGTGAGAACAGGAGCACCAAGACAGAGCTGG...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp AAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTGCTCTCACCCCAAGAGAGCCTCCTCTGTGATCTCTaGTTTCTTGTGTCAATGATG +
Preference number: 2 (lower is better)
Translates to: KMESPSEFDSSLLSPQESLLCDL*FLVSMM
Trigger: CATCATTGACACAAGAAAGCAGAGATCACAGAGGAG...GCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGAGGAGCATGTCTCTGTaGCTTCTGTCTAGGTATAGC +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLRSMSL*LLSRYS
Trigger: GCTATACCTAGACAGAAGGCACAGAGACATGCTCCT...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCTCTAGTTCCTATCTCTaGTCCTTAAACCTACAGCAA +
Preference number: 2 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLSSSYL*SLNLQQ
Trigger: TTGCTGTAGGTTTAAGGAGCAGAGATAGGAACTAGA...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGAATGGCACACATGCTTaGGACTGGTGGCATTTGGAT +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLNGTHA*DWWHLD
Trigger: ATCCAAATGCCACCAGTCCCAAGCATGTGTGCCATT...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCGTAGTAGGGAATCTTTaGAATGCTGTGCAAAACATC +
Preference number: 2 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLVVGNL*NAVQNI
Trigger: GATGTTTTGCACAGCATTCCAAAGATTCCCTACTAC...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp ATATGTCAACTTTGGCCAAGAGAGTCTAAGGTTCACAGACTCCTTTaGAAGGTCCCGTGTCCTAGACGAAGGGAATATTTCAACAAGGGG +
Preference number: 2 (lower is better)
Translates to: ICQLWPRESKVHRLL*KVPCPRRREYFNKG
Trigger: CCCCTTGTTGAAATATTCCCTTCGTCTAGGACACGGGACCTTCAAAAGGAGTCTGTGAACCTTAGACTCTCTTGGCCAAAGTTGACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp TTGGCTAAAAGAAGCTGCCAAGTGCACAACAGAGGGAAAAGGGTCTaGGCCAGAGACACAATAAAGTCCAGTAGTAGGGAATCTTTGGAA +
Preference number: 2 (lower is better)
Translates to: LAKRSCQVHNRGKRV*ARDTIKSSSRESLE
Trigger: TTCCAAAGATTCCCTACTACTGGACTTTATTGTGTCTCTGGCCAAGACCCTTTTCCCTCTGTTGTGCACTTGGCAGCTTCTTTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp TACCACTCTTCCTCATCTAGGATGCCTTCTGGTCCTGATAAGACCTaGACTCTGGAGGAAATGCAGCTACCATTTTCAGAACTAAGTCAC +
Preference number: 2 (lower is better)
Translates to: YHSSSSRMPSGPDKT*TLEEMQLPFSELSH
Trigger: GTGACTTAGTTCTGAAAATGGTAGCTGCATTTCCTCCAGAGTCAAGGTCTTATCAGGACCAGAAGGCATCCTAGATGAGGAAGAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp AAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTGCTCTCACCCCAAGAGAGCGCGTATGAAATTGTATaGGTGAGAAGGGAAGTGAAT +
Preference number: 2 (lower is better)
Translates to: KMESPSEFDSSLLSPQESAYEIV*VRREVN
Trigger: ATTCACTTCCCTTCTCACGCATACAATTTCATACGC...GCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTACCTGTAGTCTTGCCTaGCTACACCCTGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: VLDEGNISTRGVALSACITCSLA*LHPEEK
Trigger: CTTCTCTTCAGGGTGTAGGCAGGCAAGACTACAGGT...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTTTGGCTAAAAGAAGCTaGCAAGTGCACAACAGAGGG +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFLAKRS*QVHNRG
Trigger: CCCTCTGTTGTGCACTTGGCAGCTTCTTTTAGCCAA...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTGTCAAAGACTTCAGTTaGCCATCCTCCCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VLDEGNISTRGVALSACIVKDFS*PSSQLC
Trigger: ACAGAGCTGGGAGGATGGCCAACTGAAGTCTTTGAC...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGCCATCTGATTCATCTTaGGTTAAAAGTGCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGPSDSS*VKSALW
Trigger: CCACAAAGCACTTTTAACCCAAGATGAATCAGATGG...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCGAACAAATCAACCATTaGAGAAGATCCACTTATAGG +
Preference number: 2 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLEQINH*RRSTYR
Trigger: CCTATAAGTGGATCTTCTCCAATGGTTGATTTGTTC...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTACGGCAGCTCACATCTaGAACTCTGTCATGCTTTCT +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFTAAHI*NSVMLS
Trigger: AGAAAGCATGACAGAGTTCCAGATGTGAGCTGCCGT...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp TCTTGGGTTAAAAGTGCTTTGTGGGATGTGCTCAATTTGGCAAGGTaGATAAATCCAACCTTGCAGGGTTTAGCTAGTTTGGAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: SWVKSALWDVLNLAR*INPTLQGLASLEAA
Trigger: GGCTGCTTCCAAACTAGCTAAACCCTGCAAGGTTGGATTTATCAACCTTGCCAAATTGAGCACATCCCACAAAGCACTTTTAACCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp CAAATGCATAAATCAGGGCTAAACAACATCAACTACATCATTTTCTaGTCGACAGTTCCTCAAGCCGAGGGAACAAGCAGACGACAGCAG +
Preference number: 2 (lower is better)
Translates to: QMHKSGLNNINYIIF*STVPQAEGTSRRQQ
Trigger: CTGCTGTCGTCTGCTTGTTCCCTCGGCTTGAGGAACTGTCGACAAGAAAATGATGTAGTTGATGTTGTTTAGCCCTGATTTATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp TCTGGCCTGGCCATTCCATCTTCTATAGAGGAAATGAGAAATGACTaGCCAAGGCCCTGTGACCCAACTGTATATAAGGAAGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SGLAIPSSIEEMRND*PRPCDPTVYKEERE
Trigger: TTCTCTTTCTTCCTTATATACAGTTGGGTCACAGGGCCTTGGCAAGTCATTTCTCATTTCCTCTATAGAAGATGGAATGGCCAGGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAGTTACTCCATATCATTaGCTACTTCTTACTGTCCTT +
Preference number: 2 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITVTPYH*LLLTVL
Trigger: AAGGACAGTAAGAAGTAGGCAATGATATGGAGTAAC...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CAAAAATATCAATTATCAAGAGACACAAACACAGTGAGGGAGATGCCCTCAATTCCAGCCTCCAGTTCCTaGGACAGAATCCCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: QKYQLSRDTNTVREMPSIPASSS*DRIPSA
Trigger: TGCAGAAGGGATTCTGTCCCAGGAACTGGAGGCTGG...AATTGAGGGCATCTCCCTCACTGTGTTTGTGTCTCTTGATAATTGATATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp GATCTCTGCTTTCTTGTGTCAATGATGCATACCAGTTCCACAAAGTGCATGATTGAGCTTCAGAGAGGATaGGCCTCTATTTTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: DLCFLVSMMHTSSTKCMIELQRG*ASIFPL
Trigger: CAAAGGGAAAATAGAGGCCCATCCTCTCTGAAGCTC...AATCATGCACTTTGTGGAACTGGTATGCATCATTGACACAAGAAAGCAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 90 bp CACACAACAACATCTCAAACAAGTGAACTGAGAAAGACCTCGAAGTaGGAATATGTCAACTTTGGCCAAGAGAGTCTAAGGTTCACAGAC +
Preference number: 2 (lower is better)
Translates to: HTTTSQTSELRKTSK*EYVNFGQESLRFTD
Trigger: GTCTGTGAACCTTAGACTCTCTTGGCCAAAGTTGACATATTCCAACTTCGAGGTCTTTCTCAGTTCACTTGTTTGAGATGTTGTTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTCATCTGCATGACAAATaGTTCTTCCATGTACTTCCC +
Preference number: 2 (lower is better)
Translates to: VLDEGNISTRGVALSACIHLHDK*FFHVLP
Trigger: GGGAAGTACATGGAAGAATCATTTGTCATGCAGATG...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp GATCTCTGCTTTCTTGTGTCAATGATGCATACCAGTTCCACAAAGTGCATGATTCTGAAGAGAAGTGAATaGGATTTAGACGCTATGGCC +
Preference number: 2 (lower is better)
Translates to: DLCFLVSMMHTSSTKCMILKRSE*DLDAMA
Trigger: GGCCATAGCGTCTAAATCTCATTCACTTCTCTTCAG...AATCATGCACTTTGTGGAACTGGTATGCATCATTGACACAAGAAAGCAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTGCTTTCTTGTGTCAATaGTGCATACCAGTTCCACAA +
Preference number: 2 (lower is better)
Translates to: VLDEGNISTRGVALSACIAFLCQ*CIPVPQ
Trigger: TTGTGGAACTGGTATGCATCATTGACACAAGAAAGC...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTAGAGAGAAGTTCTCTTaGTGTTCAAAGTCTAACAGG +
Preference number: 2 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFREKFS*CSKSNR
Trigger: CCTGTTAGACTTTGAACATCAAGAGAACTTCTCTCT...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR TCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGTTAGAAAGAATATATTaGGGTAAAGCTGAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLLERIY*GKAESL
Trigger: GAGGCTCTCAGCTTTACCTCAATATATTCTTTCTAA...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR GCA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGATCTTTGGAATGCTGTaGAAAACATCAACAAAGCAG +
Preference number: 2 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLIFGML*KTSTKQ
Trigger: CTGCTTTGTTGATGTTTTGCACAGCATTCCAAAGAT...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CAAAAATATCAATTATCAAGAGACACAAACACAGTGAGGGAGATGCCCTCAATTACTCATTCCTTCCCTTaGTGCTCTTATGTTGAGCTT +
Preference number: 2 (lower is better)
Translates to: QKYQLSRDTNTVREMPSITHSFP*CSYVEL
Trigger: AAGCTCAACATAAGAGCACCAAGGGAAGGAATGAGT...AATTGAGGGCATCTCCCTCACTGTGTTTGTGTCTCTTGATAATTGATATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CCA 90 bp CAAAAATATCAATTATCAAGAGACACAAACACAGTGAGGGAGATGCCCTCAATTCATTTTAGGGACACTTaGGGAATTCTTTATACAGAT +
Preference number: 2 (lower is better)
Translates to: QKYQLSRDTNTVREMPSIHFRDT*GILYTD
Trigger: ATCTGTATAAAGAATTCCCCAAGTGTCCCTAAAATG...AATTGAGGGCATCTCCCTCACTGTGTTTGTGTCTCTTGATAATTGATATTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GAGGCGGCGGAGCTCGCGCGTACAGCACGACTTGCTTaGTGTTTCATCTGTACAGCGCTGCACCAGAATGGC +
Preference number: 3 (lower is better)
Translates to: EAAELARTARLA*CFICTALHQNG
Trigger: GCCATTCTGGTGCAGCGCTGTACAGATGAAACACCAAGCAAGTCGTGCTGTACGCGCGAGCTCCGCCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GAGTTGGGCAGGGATCGCTGGTGTTGCCTCTTCTGGTaGAGGGTTCCGCTAAAGGCCTGCTCTCTGTGTTGG +
Preference number: 3 (lower is better)
Translates to: ELGRDRWCCLFW*RVPLKACSLCW
Trigger: CCAACACAGAGAGCAGGCCTTTAGCGGAACCCTGCACCAGAAGAGGCAACACCAGCGATCCCTGCCCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TGGGTCTGCTGGCCATGCCAGAGAACTCACTACCGTTaGTCCTGGGTGTGTCCTCTGGGATCCACTGGTACC +
Preference number: 3 (lower is better)
Translates to: WVCWPCQRTHYR*SWVCPLGSTGT
Trigger: GGTACCAGTGGATCCCAGAGGACACACCCAGGACCAACGGTAGTGAGTTCTCTGGCATGGCCAGCAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TCAGGAAGGGTCACCTGTCAGGGTCACCAGTGGTATTaGAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCA +
Preference number: 3 (lower is better)
Translates to: SGRVTCQGHQWY*RGSSRSPLSRA
Trigger: TGCACGGGACAAAGGGCTTCTGCTGGACCCCCTCCAATACCACTGGTGACCCTGACAGGTGACCCTTCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GGGGTGAGCTGCCTGGGTTCACAGGCCCCACAGCTCTaGTACACATACAAGGCCCAAGAATCTGGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: GVSCLGSQAPQL*YTYKAQESGCL
Trigger: CAAGCACCCAGATTCTTGGGCCTTGTATGTGTACCAGAGCTGTGGGGCCTGTGAACCCAGGCAGCTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CAACTGCTCACACATCTTAGACAGCATTCGGTCCGCTaGGCTCACAGCCTCATGGGACCAGAGAGGGCGCTC +
Preference number: 3 (lower is better)
Translates to: QLLTHLRQHSVR*AHSLMGPERAL
Trigger: GAGCGCCCTCTCTGGTCCCATGAGGCTGTGAGCTCAGCGGACCGAATGCTGTCTAAGATGTGTGAGCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp AAATACTGGCCCCAAGCAGCTTTCGGCACACCCAGCTaGTCTGGGGATAGGAGAGGGACCAAGAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: KYWPQAAFGTPS*SGDRRGTKKQV
Trigger: CACCTGCTTCTTGGTCCCTCTCCTATCCCCAGAGCAGCTGGGTGTGCCGAAAGCTGCTTGGGGCCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GTTCCCACCCCTCCGACGCTGAAGTGCCTTGCTGTGTaGATAGCTCCTGGACCTATTGGTAAAGGCTCGCTC +
Preference number: 3 (lower is better)
Translates to: VPTPPTLKCLAV*IAPGPIGKGSL
Trigger: GAGCGAGCCTTTACCAATAGGTCCAGGAGCTATCCACACAGCAAGGCACTTCAGCGTCGGAGGGGTGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TACCTCTCAGGAAGGGTCACCTGTCAGGGTCACCAGTaGTATTGGAGGGGGTCCAGCAGAAGCCCTTTGTCC +
Preference number: 3 (lower is better)
Translates to: YLSGRVTCQGHQ*YWRGSSRSPLS
Trigger: GGACAAAGGGCTTCTGCTGGACCCCCTCCAATACCACTGGTGACCCTGACAGGTGACCCTTCCTGAGAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACACAGCCACCCAGTCCTaGGGGGAAGAAGAGAGGAGT +
Preference number: 3 (lower is better)
Translates to: LPPTCPALVSCLRKESQNTATQS*GEEERS
Trigger: ACTCCTCTCTTCTTCCCCCAAGGACTGGGTGGCTGT...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GTATTGGAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTaGAGGCAGAAGCCATTTTCTGCCCTGTACATGGGT +
Preference number: 3 (lower is better)
Translates to: VLEGVQQKPFVP*RQKPFSALYMG
Trigger: ACCCATGTACAGGGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTCCAATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp CCAGAGGAGTCCTGGATGCTCCTGGTTTCAGCCCAATaGCACACATGCTTGGGACTGGTGGCATTTGGATGC +
Preference number: 3 (lower is better)
Translates to: PEESWMLLVSAQ*HTCLGLVAFGC
Trigger: GCATCCAAATGCCACCAGTCCCAAGCATGTGTGCCATTGGGCTGAAACCAGGAGCATCCAGGACTCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TGCTGGCCATGCCAGAGAACTCACTACCGTTGGTCCTaGGTGTGTCCTCTGGGATCCACTGGTACCAAGATG +
Preference number: 3 (lower is better)
Translates to: CWPCQRTHYRWS*VCPLGSTGTKM
Trigger: CATCTTGGTACCAGTGGATCCCAGAGGACACACCCAGGACCAACGGTAGTGAGTTCTCTGGCATGGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TCCCGTGCAGGCAGAAGCCATTTTCTGCCCTGTACATaGGTCTGCTGGCCATGCCAGAGAACTCACTACCGT +
Preference number: 3 (lower is better)
Translates to: SRAGRSHFLPCT*VCWPCQRTHYR
Trigger: ACGGTAGTGAGTTCTCTGGCATGGCCAGCAGACCCATGTACAGGGCAGAAAATGGCTTCTGCCTGCACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCGCTCTGTGTCAACACTaGTGTTTCTTCACCAGCTCT +
Preference number: 3 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSAALCQH*CFFTSS
Trigger: AGAGCTGGTGAAGAAACACAAGTGTTGACACAGAGC...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp AGACTTCAGTTGGCCATCCTCCCAGCTCTGTCTTGGTaGTCCTGTTCTCACACCTGTCCTAGGAAAGCCACC +
Preference number: 3 (lower is better)
Translates to: RLQLAILPALSW*SCSHTCPRKAT
Trigger: GGTGGCTTTCCTAGGACAGGTGTGAGAACAGGAGCACCAAGACAGAGCTGGGAGGATGGCCAACTGAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GGAGCTGGCACCTCCACCAGGTACATTCTTGGAAGTTaGTCCCCTTCATTGGGGATCCATGCAAAGCCTCCT +
Preference number: 3 (lower is better)
Translates to: GAGTSTRYILGS*SPSLGIHAKPP
Trigger: AGGAGGCTTTGCATGGATCCCCAATGAAGGGGAGCAACTTCCAAGAATGTACCTGGTGGAGGTGCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CATGCCTTGCCACCAACGTGCCCAGCCCTGGTCAGCTaGTTAAGGAAAGAAAGCCAGAACACAGTGGGAACA +
Preference number: 3 (lower is better)
Translates to: HALPPTCPALVS*LRKESQNTVGT
Trigger: TGTTCCCACTGTGTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GGCCCAAGAATCTGGGTGCTTGGCCACTCAGGTGGCTaGCATTGTGTGAAGGAAGAGAAGACTGCTTTGGTC +
Preference number: 3 (lower is better)
Translates to: GPRIWVLGHSGG*HCVKEEKTALV
Trigger: GACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAGTGGCCAAGCACCCAGATTCTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp AAGGTTTGGGTGAAAGGAATGAAGACAGGGGTGAGCTaGCTGGGTTCACAGGCCCCACAGCTCTGGTACACA +
Preference number: 3 (lower is better)
Translates to: KVWVKGMKTGVS*LGSQAPQLWYT
Trigger: TGTGTACCAGAGCTGTGGGGCCTGTGAACCCAGGCAGCTCACCCCTGTCTTCATTCCTTTCACCCAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GCGAGCTTCAGAGAGGATGGGCCTCTATTTTCCCTTTaGACAGCTCTGCCTGGCTGGAAAGGCCGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: ASFREDGPLFSL*TALPGWKGRKE
Trigger: TTCTTTCCGGCCTTTCCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGGCCCATCCTCTCTGAAGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp CTATGTCCCTCTGACTTGACTCCTGAGCCTAATGCTTaGCCCTGTGAAGACACCGAGCAGGATCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: LCPSDLTPEPNA*PCEDTEQDLSS
Trigger: GGAGGACAGATCCTGCTCGGTGTCTTCACAGGGCCAAGCATTAGGCTCAGGAGTCAAGTCAGAGGGACATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TGTGGTGACCGTCCCATTCACATCTATGTCATTGTGTaGGTGGGCGGGGAGCCCACTGGGTGGATGATAACT +
Preference number: 3 (lower is better)
Translates to: CGDRPIHIYVIV*VGGEPTGWMIT
Trigger: AGTTATCATCCACCCAGTGGGCTCCCCGCCCACCCACACAATGACATAGATGTGAATGGGACGGTCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTATTCTCTGGACAGACTaGAGAGCCCTGTGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: QEPLEREWPLMSGDEGRIILWTD*RALCRA
Trigger: TGCCCTGCACAGGGCTCTCAAGTCTGTCCAGAGAAT...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CAGGAGCCTCTGGAAAGGGAGTGGCCTTTGATGAGTGGGGATGAGGGAAGAATTACAAATGATAGCCTCTaGATGGGCAGGGCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: QEPLEREWPLMSGDEGRITNDSL*MGRAGQ
Trigger: CTGGCCTGCCCTGCCCATCAAGAGGCTATCATTTGT...AATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACGGCCTGCTCTCTGTGTaGGACCTGTCATGCAAATGT +
Preference number: 3 (lower is better)
Translates to: LPPTCPALVSCLRKESQNGLLSV*DLSCKC
Trigger: ACATTTGCATGACAGGTCCAACACAGAGAGCAGGCC...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp GGGAAGTCCACCTTCTGGACCCTTCTGGGTAGGAACTaGGAGTGGATCCTTGGTTCTCTCAGTGCCTCAACA +
Preference number: 3 (lower is better)
Translates to: GKSTFWTLLGRN*EWILGSLSAST
Trigger: TGTTGAGGCACTGAGAGAACCAAGGATCCACTCTCAGTTCCTACCCAGAAGGGTCCAGAAGGTGGACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CTCCCTAAGGCATGCCCTTGTATCACTTTCTGTGTTTaGGGCTCCCATCCCACCCCACCCACACTTCAGTAC +
Preference number: 3 (lower is better)
Translates to: LPKACPCITFCV*GSHPTPPTLQY
Trigger: GTACTGAAGTGTGGGTGGGGTGGGATGGGAGCCTCAAACACAGAAAGTGATACAAGGGCATGCCTTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp TCCTGGATGCTCCTGGTTTCAGCCCAATGGCACACATaGTTGGGACTGGTGGCATTTGGATGCTGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: SWMLLVSAQWHT*LGLVAFGCCVL
Trigger: AAGGACACAGCATCCAAATGCCACCAGTCCCAAGCATGTGTGCCATTGGGCTGAAACCAGGAGCATCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CCCTGCTCTCACCCCAAGAGAGCACATCAGTGGATGTaGCCAGAGAACAATATCACCAGGTCCTACGCTAAG +
Preference number: 3 (lower is better)
Translates to: PCSHPKRAHQWM*PENNITRSYAK
Trigger: CTTAGCGTAGGACCTGGTGATATTGTTCTCTGGGCACATCCACTGATGTGCTCTCTTGGGGTGAGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp TTGCAGGCAAGGGACCCTACAAGGAGCATGTCTCTGTaGCTTCTGTCTAGGTATAGCTGGGCCATTCCCACA +
Preference number: 3 (lower is better)
Translates to: LQARDPTRSMSL*LLSRYSWAIPT
Trigger: TGTGGGAATGGCCCAGCTATACCTAGACAGAAGGCACAGAGACATGCTCCTTGTAGGGTCCCTTGCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp ACTCCTCCCTGCTCTCACCCCAAGAGAGCACATCAGTaGATGTGCCCAGAGAACAATATCACCAGGTCCTAC +
Preference number: 3 (lower is better)
Translates to: TPPCSHPKRAHQ*MCPENNITRSY
Trigger: GTAGGACCTGGTGATATTGTTCTCTGGGCACATCCACTGATGTGCTCTCTTGGGGTGAGAGCAGGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp CCACCAGGTACATTCTTGGAAGTTGCTCCCCTTCATTaGGGATCCATGCAAAGCCTCCTCCCCAGTGTGATC +
Preference number: 3 (lower is better)
Translates to: PPGTFLEVAPLH*GSMQSLLPSVI
Trigger: GATCACACTGGGGAGGAGGCTTTGCATGGATCCCCAATGAAGGGGAGCAACTTCCAAGAATGTACCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp CAGTTGACGGTGTCGAGTGGAGTCCTTAGGAAGGTTTaGGTGAAAGGAATGAAGACAGGGGTGAGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: QLTVSSGVLRKV*VKGMKTGVSCL
Trigger: CAGGCAGCTCACCCCTGTCTTCATTCCTTTCACCCAAACCTTCCTAAGGACTCCACTCGACACCGTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACTGGGACTGGTGGCATTaGGATGCTGTGTCCTTTAAG +
Preference number: 3 (lower is better)
Translates to: LPPTCPALVSCLRKESQNWDWWH*DAVSFK
Trigger: CTTAAAGGACACAGCATCCAAATGCCACCAGTCCCA...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CAGTTTGGTCCCCCACAAAGCAACAGATGGTTGATGTaGAGGGAGGCCTCTTGTTGGGCCAAGTGGACATAC +
Preference number: 3 (lower is better)
Translates to: QFGPPQSNRWLM*REASCWAKWTY
Trigger: GTATGTCCACTTGGCCCAACAAGAGGCCTCCCTTCACATCAACCATCTGTTGCTTTGTGGGGGACCAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CCTGTGGAACTCTCCACGTCTTTATCACCCTTTCCGTaGGGGCATTCTAGCCAGCCTTTGGCAGCTTCACTT +
Preference number: 3 (lower is better)
Translates to: PVELSTSLSPFP*GHSSQPLAASL
Trigger: AAGTGAAGCTGCCAAAGGCTGGCTAGAATGCCCTCACGGAAAGGGTGATAAAGACGTGGAGAGTTCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GGGGAGAAAGGAAGGAATCCATGCTTCATGCTCAGGTaGGAGCTTCAGAGAGGATGGGCCTCTATTTTCCCT +
Preference number: 3 (lower is better)
Translates to: GEKGRNPCFMLR*ELQRGWASIFP
Trigger: AGGGAAAATAGAGGCCCATCCTCTCTGAAGCTCGCACCTGAGCATGAAGCATGGATTCCTTCCTTTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp AGGCATAACTCTGGTGGGGAGAAAGGAAGGAATCCATaGTTCATGCTCAGGTGCGAGCTTCAGAGAGGATGG +
Preference number: 3 (lower is better)
Translates to: RHNSGGEKGRNP*FMLRCELQRGW
Trigger: CCATCCTCTCTGAAGCTCGCACCTGAGCATGAAGCATGGATTCCTTCCTTTCTCCCCACCAGAGTTATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp ATGCCTGATCCTTTCCACCTTGTCGCACAACACACCTaGACACAGAAGCGCACACGCTCATATTACACACGC +
Preference number: 3 (lower is better)
Translates to: MPDPFHLVAQHT*TQKRTRSYYTR
Trigger: GCGTGTGTAATATGAGCGTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAAAGGATCAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CAATCACCCATCATGGGCTCAGGTCTTAGAGGCTATTaGCTTGGCCTCAAGACTGAATGGGGCAACCAGGAA +
Preference number: 3 (lower is better)
Translates to: QSPIMGSGLRGY*LGLKTEWGNQE
Trigger: TTCCTGGTTGCCCCATTCAGTCTTGAGGCCAAGGCAATAGCCTCTAAGACCTGAGCCCATGATGGGTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp TGGAATACCCCATGTCTACTTCAGCCAGATAACTCATaGTTGGACCTGCTTTATCCTGGGGCTTCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: WNTPCLLQPDNS*LDLLYPGASLP
Trigger: GGGGAGGGAAGCCCCAGGATAAAGCAGGTCCAAGCATGAGTTATCTGGCTGAAGTAGACATGGGGTATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp ACCTTGGTGTTGGGAAGTCCACCTTCTGGACCCTTCTaGGTAGGAACTGAGAGTGGATCCTTGGTTCTCTCA +
Preference number: 3 (lower is better)
Translates to: TLVLGSPPSGPF*VGTESGSLVLS
Trigger: TGAGAGAACCAAGGATCCACTCTCAGTTCCTACCCAGAAGGGTCCAGAAGGTGGACTTCCCAACACCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTaGCCCCAAGCAGCTTTCGGCACACCCAGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SRTEVGPRCIKY*PQAAFGTPSCS
Trigger: AGAGCAGCTGGGTGTGCCGAAAGCTGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp ACAAGGCCCAAGAATCTGGGTGCTTGGCCACTCAGGTaGCTGCCATTGTGTGAAGGAAGAGAAGACTGCTTT +
Preference number: 3 (lower is better)
Translates to: TRPKNLGAWPLR*LPLCEGREDCF
Trigger: AAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAGTGGCCAAGCACCCAGATTCTTGGGCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCAAACCAGGATTTTCGTaGTTTCCAAGGGTTTGCATT +
Preference number: 3 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSAKPGFS*FPRVCI
Trigger: AATGCAAACCCTTGGAAACAACGAAAATCCTGGTTT...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCAAGGGAGGCCTCTTGTaGGGCCAAGTGGACATACAT +
Preference number: 3 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLKGGLL*GQVDIH
Trigger: ATGTATGTCCACTTGGCCCAACAAGAGGCCTCCCTT...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGCAATGGCACACATGCTaGGGACTGGTGGCATTTGGA +
Preference number: 3 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGQWHTC*GLVAFG
Trigger: TCCAAATGCCACCAGTCCCAAGCATGTGTGCCATTG...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GCAGGTATGGGTCATGGGTTGGCGGGGAAAGGAATGTaGTCTAGAATATGCCAGAGCAAACATCTTGAAGGC +
Preference number: 3 (lower is better)
Translates to: AGMGHGLAGKGM*SRICQSKHLEG
Trigger: GCCTTCAAGATGTTTGCTCTGGCATATTCTAGAGCACATTCCTTTCCCCGCCAACCCATGACCCATACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GCATTAAGTGCATGCATTGACTTTCCAGAGGAGTCCTaGATGCTCCTGGTTTCAGCCCAATGGCACACATGC +
Preference number: 3 (lower is better)
Translates to: ALSACIDFPEES*MLLVSAQWHTC
Trigger: GCATGTGTGCCATTGGGCTGAAACCAGGAGCATCCAGGACTCCTCTGGAAAGTCAATGCATGCACTTAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TGCTTGGTGTTTCATCTGTACAGCGCTGCACCAGAATaGCTCAGGAGTTACAGTTACAGTTTGGTCCCCCAC +
Preference number: 3 (lower is better)
Translates to: CLVFHLYSAAPE*LRSYSYSLVPH
Trigger: GTGGGGGACCAAACTGTAACTGTAACTCCTGAGCCATTCTGGTGCAGCGCTGTACAGATGAAACACCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GAGCTCTACCCCAATCCTTCCAGAACCATCCTTGGCTaGGATGGCAGAATTGAGCATTCCTGTGCTCTAAGT +
Preference number: 3 (lower is better)
Translates to: ELYPNPSRTILG*DGRIEHSCALS
Trigger: ACTTAGAGCACAGGAATGCTCAATTCTGCCATCCCAGCCAAGGATGGTTCTGGAAGGATTGGGGTAGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGATTTCCCTGTTTACCTaGACATCTCCAGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGISLFT*TSPAAG
Trigger: CCCTGCAGCTGGAGATGTCAAGGTAAACAGGGAAAT...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGCAGGGTCATCCTTTATaGAGAGCGGGGAGGAATATC +
Preference number: 3 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGQGHPL*RAGRNI
Trigger: GATATTCCTCCCCGCTCTCAATAAAGGATGACCCTG...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGGTTCACAGACTCCTTTaGAAGGTCCCGTGTCCTAGA +
Preference number: 3 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGVHRLL*KVPCPR
Trigger: TCTAGGACACGGGACCTTCAAAAGGAGTCTGTGAAC...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCAACTGAGAGTGGATCCTaGGTTCTCTCAGTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQATESGS*VLSVPQ
Trigger: TTGAGGCACTGAGAGAACCAAGGATCCACTCTCAGT...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCACCAGATAACTCATGCTaGGACCTGCTTTATCCTGGG +
Preference number: 3 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQAPDNSC*DLLYPG
Trigger: CCCAGGATAAAGCAGGTCCAAGCATGAGTTATCTGG...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp GAATCCCTTCTGCAAACAACCTGGCATGAGGTCTGTTaGAGGGGTTTGGTTAACTGGAGGGAAGGGTACAAC +
Preference number: 3 (lower is better)
Translates to: ESLLQTTWHEVC*RGLVNWREGYN
Trigger: GTTGTACCCTTCCCTCCAGTTAACCAAACCCCTTCAACAGACCTCATGCCAGGTTGTTTGCAGAAGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp TCCTGGGATGGGGTACCTTTAAGGATCCAAATGGGATaGACACTAGAAATCAGCAAGCCCAGAGCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: SWDGVPLRIQMG*TLEISKPRALG
Trigger: ACCCAGAGCTCTGGGCTTGCTGATTTCTAGTGTTCATCCCATTTGGATCCTTAAAGGTACCCCATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GTAAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTaGTCTCACCCCAAGAGAGCACATCAGTGGATGTGC +
Preference number: 3 (lower is better)
Translates to: VKWRVLQNLTPP*SHPKRAHQWMC
Trigger: GCACATCCACTGATGTGCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp AGGGAAGGGTACAACAATCACTTGGCTAAAAGAAGCTaGCAAGTGCACAACAGAGGGAAAAGGGTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: REGYNNHLAKRS*QVHNRGKRVLA
Trigger: GGCCAAGACCCTTTTCCCTCTGTTGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp ATCTCCTTCATCAGGTACACAGAGAACATACAGGTGTaGCCATCTCACTATGGCCATACTGAAGCCAGCACC +
Preference number: 3 (lower is better)
Translates to: ISFIRYTENIQV*PSHYGHTEAST
Trigger: GGTGCTGGCTTCAGTATGGCCATAGTGAGATGGGCACACCTGTATGTTCTCTGTGTACCTGATGAAGGAGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GTGGTGGATATATCTGGGAATATCATCGGCTGCATGTaGTTCTCTGGCTTACCTCAGACCATCACAACCCTG +
Preference number: 3 (lower is better)
Translates to: VVDISGNIIGCM*FSGLPQTITTL
Trigger: CAGGGTTGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGATATATCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TGCATCTGGTCTGTGAGGGAAGTTGGAATCAGTAGGTaGATATCAGCCAGTACTGCACAGAAACTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: CIWSVREVGISR*ISASTAQKLSP
Trigger: TGGGGACAGTTTCTGTGCAGTACTGGCTGATATCCACCTACTGATTCCAACTTCCCTCACAGACCAGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GAACCACTCCCCTGCTATGTGAGTGGTGGATATATCTaGGAATATCATCGGCTGCATGTGCTTCTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: EPLPCYVSGGYI*EYHRLHVLLWL
Trigger: AAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGATATATCCACCACTCACATAGCAGGGGAGTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAAGAGGGAAAAGGGTCTaGGCCAGAGACACAATAAAG +
Preference number: 3 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITRGKRV*ARDTIK
Trigger: CTTTATTGTGTCTCTGGCCAAGACCCTTTTCCCTCT...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CTTGGGAATGGGAGAGGTAAGCTAAGAGTCCTTAAGTCCATCCACAGGAGCCTCGCAGTGTTCATTTGGTaGGTGGAGGTTTCTGATAAG +
Preference number: 3 (lower is better)
Translates to: LGNGRGKLRVLKSIHRSLAVFIW*VEVSDK
Trigger: CTTATCAGAAACCTCCACCAACCAAATGAACACTGC...GAGGCTCCTGTGGATGGACTTAAGGACTCTTAGCTTACCTCTCCCATTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp ACAAAATACCCCAGATTTCTCCCTGTGGGCCTGATCTaGCTTCATATGCAAATTCTGCCCAGCGGGATTCAC +
Preference number: 3 (lower is better)
Translates to: TKYPRFLPVGLI*LHMQILPSGIH
Trigger: GTGAATCCCGCTGGGCAGAATTTGCATATGAAGTCAGATCAGGCCCACAGGGAGAAATCTGGGGTATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp TCCCTAGCAAGCTGCAAAAGGCAAACCAACACTGTTTaGAGAGCCAAAGCTCTCCCTGAAGTTTACAAGACC +
Preference number: 3 (lower is better)
Translates to: SLASCKRQTNTV*RAKALPEVYKT
Trigger: GGTCTTGTAAACTTCAGGGAGAGCTTTGGCTCTGCAAACAGTGTTGGTTTGCCTTTTGCAGCTTGCTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp AGCCCAATGGCACACATGCTTGGGACTGGTGGCATTTaGATGCTGTGTCCTTTAAGAAATCTTGAAGACCAG +
Preference number: 3 (lower is better)
Translates to: SPMAHMLGTGGI*MLCPLRNLEDQ
Trigger: CTGGTCTTCAAGATTTCTTAAAGGACACAGCATCCAAATGCCACCAGTCCCAAGCATGTGTGCCATTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGCAGGGTTTAGCTAGTTaGGAAGCAGCCTCTAGGAGA +
Preference number: 3 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLQGLAS*EAASRR
Trigger: TCTCCTAGAGGCTGCTTCCAAACTAGCTAAACCCTG...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGCTATGTCCCTCTGACTaGACTCCTGAGCCTAATGCT +
Preference number: 3 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLLCPSD*TPEPNA
Trigger: AGCATTAGGCTCAGGAGTCAAGTCAGAGGGACATAG...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAAGATCTGGTTCCAGTTaGGGGGCTAATAGAGAATCT +
Preference number: 3 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITRSGSS*GANRES
Trigger: AGATTCTCTATTAGCCCCCAAACTGGAACCAGATCT...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTGGTCCTGATAAGACCTaGACTCTGGAGGAAATGCAG +
Preference number: 3 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFGPDKT*TLEEMQ
Trigger: CTGCATTTCCTCCAGAGTCAAGGTCTTATCAGGACC...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp TATGAAATTGTATGCGTGAGAAGGGAAGTGAATGCCTaGTCCTTTCCACCTTGTCGCACAACACACCTGCAC +
Preference number: 3 (lower is better)
Translates to: YEIVCVRREVNA*SFPPCRTTHLH
Trigger: GTGCAGGTGTGTTGTGCGACAAGGTGGAAAGGATCAGGCATTCACTTCCCTTCTCACGCATACAATTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp GATACTCTTGGGTCCCACCTATTTCCCTGTTTACCTTaGCATCTCCAGCTGCAGGGAAAACTTCTGGAACTA +
Preference number: 3 (lower is better)
Translates to: DTLGSHLFPCLP*HLQLQGKLLEL
Trigger: TAGTTCCAGAAGTTTTCCCTGCAGCTGGAGATGTCAAGGTAAACAGGGAAATAGGTGGGACCCAAGAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp TCCCAGCAGGCCAAGATACAGCCTCTAAAACGTTCCTaGGACCAACATGAACTTCTCCCTATGTACAGATCA +
Preference number: 3 (lower is better)
Translates to: SQQAKIQPLKRS*DQHELLPMYRS
Trigger: TGATCTGTACATAGGGAGAAGTTCATGTTGGTCTCAGGAACGTTTTAGAGGCTGTATCTTGGCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CCTCATCTAGGATGCCTTCTGGTCCTGATAAGACCTTaGCTCTGGAGGAAATGCAGCTACCATTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: PHLGCLLVLIRP*LWRKCSYHFQN
Trigger: GTTCTGAAAATGGTAGCTGCATTTCCTCCAGAGTCAAGGTCTTATCAGGACCAGAAGGCATCCTAGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp TTCAACATATTAGTTGTCTCCATGTTGAAGGTAGGGTaGGGGGAAGATCAAGCCCACACCTCCCACTATCCA +
Preference number: 3 (lower is better)
Translates to: FNILVVSMLKVG*GEDQAHTSHYP
Trigger: TGGATAGTGGGAGGTGTGGGCTTGATCTTCCCCTCACCCTACCTTCAACATGGAGACAACTAATATGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATaGATTGACTTTCCAGAGGAGTCCTGGATGCTCCTG +
Preference number: 3 (lower is better)
Translates to: GNISTRGVALSA*IDFPEESWMLL
Trigger: CAGGAGCATCCAGGACTCCTCTGGAAAGTCAATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TGGTCACTGTGTGACCACTTCACACAGATGCATGAATaGGAAGCTAGCTCTAAAGATAGGCTGAGCCTATGT +
Preference number: 3 (lower is better)
Translates to: WSLCDHFTQMHE*EASSKDRLSLC
Trigger: ACATAGGCTCAGCCTATCTTTAGAGCTAGCTTCCCATTCATGCATCTGTGTGAAGTGGTCACACAGTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GTTTGGTTAACTGGAGGGAAGGGTACAACAATCACTTaGCTAAAAGAAGCTGCCAAGTGCACAACAGAGGGA +
Preference number: 3 (lower is better)
Translates to: VWLTGGKGTTIT*LKEAAKCTTEG
Trigger: TCCCTCTGTTGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCTCCAGTTAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp ATGTCTTTTACTGTAGTGAATGAGGAGATTGTGTGGTaGTCATCACCACTCATGAGGTTGCTGCTAGGTGCC +
Preference number: 3 (lower is better)
Translates to: MSFTVVNEEIVW*SSPLMRLLLGA
Trigger: GGCACCTAGCAGCAACCTCATGAGTGGTGATGACCACCACACAATCTCCTCATTCACTACAGTAAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GGCATGTCTTTTACTGTAGTGAATGAGGAGATTGTGTaGTGGTCATCACCACTCATGAGGTTGCTGCTAGGT +
Preference number: 3 (lower is better)
Translates to: GMSFTVVNEEIV*WSSPLMRLLLG
Trigger: ACCTAGCAGCAACCTCATGAGTGGTGATGACCACCACACAATCTCCTCATTCACTACAGTAAAAGACATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GAACAGGAGCTAGGATGTCAAGTGACTTTCATTCAGTaGCATGCTACTATGGATCCCAGAGCTACCTCATCA +
Preference number: 3 (lower is better)
Translates to: EQELGCQVTFIQ*HATMDPRATSS
Trigger: TGATGAGGTAGCTCTGGGATCCATAGTAGCATGCCACTGAATGAAAGTCACTTGACATCCTAGCTCCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp ACTGGAGGGAAGGGTACAACAATCACTTGGCTAAAAGAAGCTGCCAAGTGCACATGGGATGTGCTCAATTaGGCAAGGTTGATAAATCCA +
Preference number: 3 (lower is better)
Translates to: TGGKGTTITWLKEAAKCTWDVLN*ARLINP
Trigger: TGGATTTATCAACCTTGCCAAATTGAGCACATCCCA...TGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACAAGTAGTAGGGAATCTTaGGAATGCTGTGCAAAACAT +
Preference number: 3 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITSSRES*ECCAKH
Trigger: ATGTTTTGCACAGCATTCCAAAGATTCCCTACTACT...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGGGGTACAACAATCACTaGGCTAAAAGAAGCTGCCAA +
Preference number: 3 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLGYNNH*AKRSCQ
Trigger: TTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCC...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp ACCTGTAGTCTTGCCTGCCTACACCCTGAAGAGAAGTaGATGAGATTTAGACGCTATGGCCATCTGATTCAT +
Preference number: 3 (lower is better)
Translates to: TCSLACLHPEEK*MRFRRYGHLIH
Trigger: ATGAATCAGATGGCCATAGCGTCTAAATCTCATTCACTTCTCTTCAGGGTGTAGGCAGGCAAGACTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp TATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTaGCTTTCCAGAGGAGTCCTGGATGCTCCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: YFNKGCSIKCMH*LSRGVLDAPGF
Trigger: GAAACCAGGAGCATCCAGGACTCCTCTGGAAAGTCAATGCATGCACTTAATGCTACACCCCTTGTTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CAGATCAGAGGTGATCACACATACCTACCCACCATTTaGAGGAAAATCTTACAACAGTCTCAGGGGAACTCC +
Preference number: 3 (lower is better)
Translates to: QIRGDHTYLPTI*RKILQQSQGNS
Trigger: GGAGTTCCCCTGAGACTGTTGTAAGATTTTCCTTCAAATGGTGGGTAGGTATGTGTGATCACCTCTGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp GACATGACAGTGAGGCATGTCTTTTACTGTAGTGAATaGGGAGATTGTGTGGTGGTCATCACCACTCATGAG +
Preference number: 3 (lower is better)
Translates to: DMTVRHVFYCSE*GDCVVVITTHE
Trigger: CTCATGAGTGGTGATGACCACCACACAATCTCCTCATTCACTACAGTAAAAGACATGCCTCACTGTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CCTGTTCTTAGGAACCTAGCCCATCTTGAAATGACTTaGCCTTGCCTCTCCTCTGACTTCTACCACCAAAAT +
Preference number: 3 (lower is better)
Translates to: PVLRNLAHLEMT*PCLSSDFYHQN
Trigger: ATTTTGGTGGTAGAAGTCAGAGGAGAGGCAAGGTCAAGTCATTTCAAGATGGGCTAGGTTCCTAAGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CAACTCCCAAGGCACGTGCAATTGAATAGCAAGCAATaGAATGCAAACCAGGATTTTCGTTGTTTCCAAGGG +
Preference number: 3 (lower is better)
Translates to: QLPRHVQLNSKQ*NANQDFRCFQG
Trigger: CCCTTGGAAACAACGAAAATCCTGGTTTGCATTGCATTGCTTGCTATTCAATTGCACGTGCCTTGGGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTaGTTCTGGCCTGGCCATTCCATCTTCTATAGAGGA +
Preference number: 3 (lower is better)
Translates to: HLFCTSVYLRDT*FWPGHSIFYRG
Trigger: TCCTCTATAGAAGATGGAATGGCCAGGCCAGAAGCAGGTATCTCTTAGATACACACTGGTACAGAAGAGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CTCAGGTGGCTGCCATTGTGTGAAGGAAGAGAAGACTaGTTTGGTCTCCAAAATATGAACACGGGAATCTTT +
Preference number: 3 (lower is better)
Translates to: LRWLPLCEGRED*FGLQNMNTGIF
Trigger: AAAGATTCCCGTGTTCATATTTTGGAGACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp ACTGGAGGGAAGGGTACAACAATCACTTGGCTAAAAGAAGCTGCCAAGTGCACAATGACCTCAGATATGTaGACTTCCCTAAATCTCAGT +
Preference number: 3 (lower is better)
Translates to: TGGKGTTITWLKEAAKCTMTSDM*TSLNLS
Trigger: ACTGAGATTTAGGGAAGTCAACATATCTGAGGTCAT...TGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp GTGAAGGAAGAGAAGACTGCTTTGGTCTCCAAAATATaGACACGGGAATCTTTACAAGCTCTGTGCAACAGG +
Preference number: 3 (lower is better)
Translates to: VKEEKTALVSKI*TRESLQALCNR
Trigger: CCTGTTGCACAGAGCTTGTAAAGATTCCCGTGTTCATATTTTGGAGACCAAAGCAGTCTTCTCTTCCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp CTCTTCATAGAAATGGCCTACTCCCATATGGTAAAATaGAGAGTCCTTCAGAATTTGACTCCTCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LFIEMAYSHMVK*RVLQNLTPPCS
Trigger: AGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTTACCATATGGGAGTAGGCCATTTCTATGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp ACAACAAGACAAGCAGGTGTGGGGTGTGATCTTGGATaGCATCTTAGATTCACAAACAAGTTCAGTAGGACA +
Preference number: 3 (lower is better)
Translates to: TTRQAGVGCDLG*HLRFTNKFSRT
Trigger: TGTCCTACTGAACTTGTTTGTGAATCTAAGATGCCATCCAAGATCACACCCCACACCTGCTTGTCTTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp CATCAGATTAAAGAAAAACTACAGAGGCTCAAGAAGTaGAATGACTTCCAAGAGCCCAGTAAGGCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: HQIKEKLQRLKK*NDFQEPSKARQ
Trigger: CTGCCTTGCCTTACTGGGCTCTTGGAAGTCATTTCACTTCTTGAGCCTCTGTAGTTTTTCTTTAATCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp TCAGCAAGCCCAGAGCTCTGGGTTACTCCATATCATTaGCTACTTCTTACTGTCCTTGATGAAATAAAGATG +
Preference number: 3 (lower is better)
Translates to: SASPELWVTPYH*LLLTVLDEIKM
Trigger: CATCTTTATTTCATCAAGGACAGTAAGAAGTAGGCAATGATATGGAGTAACCCAGAGCTCTGGGCTTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CAATGCAAACCAGGATTTTCGTTGTTTCCAAGGGTTTaGATTGGAATACCCCATGTCTACTTCAGCCAGATA +
Preference number: 3 (lower is better)
Translates to: QCKPGFSLFPRV*IGIPHVYFSQI
Trigger: TATCTGGCTGAAGTAGACATGGGGTATTCCAATGCAAACCCTTGGAAACAACGAAAATCCTGGTTTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp CATCAAATTATAGAGAATCTTGTTAATTGTGGGTTCTaGCTCACTGGCTTCCCGCTCACTGCATTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: HQIIENLVNCGF*LTGFPLTAFFL
Trigger: CAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAACCCACAATTAACAAGATTCTCTATAATTTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp ACTGAGAAAGACCTCGAAGTTGGAATATGTCAACTTTaGCCAAGAGAGTCTAAGGTTCACAGACTCCTTTTG +
Preference number: 3 (lower is better)
Translates to: TEKDLEVGICQL*PRESKVHRLLL
Trigger: CAAAAGGAGTCTGTGAACCTTAGACTCTCTTGGCCAAAGTTGACATATTCCAACTTCGAGGTCTTTCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp CAAACCAGGATTTTCGTTGTTTCCAAGGGTTTGCATTaGAATACCCCATGTCTACTTCAGCCAGATAACTCA +
Preference number: 3 (lower is better)
Translates to: QTRIFVVSKGLH*NTPCLLQPDNS
Trigger: TGAGTTATCTGGCTGAAGTAGACATGGGGTATTCCAATGCAAACCCTTGGAAACAACGAAAATCCTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp GGGCATTCCACACAACAACATCTCAAACAAGTGAACTaGGAAAGACCTCGAAGTTGGAATATGTCAACTTTG +
Preference number: 3 (lower is better)
Translates to: GHSTQQHLKQVN*ERPRSWNMSTL
Trigger: CAAAGTTGACATATTCCAACTTCGAGGTCTTTCTCAGTTCACTTGTTTGAGATGTTGTTGTGTGGAATGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp AAAACAATTGTCAAGGCATGCTCTAGTTCCTATCTCTaGTCCTTAAACCTACAGCAACTGCTCACACATCTT +
Preference number: 3 (lower is better)
Translates to: KTIVKACSSSYL*SLNLQQLLTHL
Trigger: AAGATGTGTGAGCAGTTGCTGTAGGTTTAAGGAGCAGAGATAGGAACTAGAGCATGCCTTGACAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp TTCCAGCTTGAAGCAATGAAAACAATTGTCAAGGCATaGTCTAGTTCCTATCTCTGCTCCTTAAACCTACAG +
Preference number: 3 (lower is better)
Translates to: FQLEAMKTIVKA*SSSYLCSLNLQ
Trigger: CTGTAGGTTTAAGGAGCAGAGATAGGAACTAGAGCATGCCTTGACAATTGTTTTCATTGCTTCAAGCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp GAGCCCTTATCCGTCTACATTCCAGCTGACATAGATTaGCACTGGAATTCAAGATCTGTACAGTTTTCATAT +
Preference number: 3 (lower is better)
Translates to: EPLSVYIPADID*HWNSRSVQFSY
Trigger: ATATGAAAACTGTACAGATCTTGAATTCCAGTGCCAATCTATGTCAGCTGGAATGTAGACGGATAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTTATACAATGTTATCTTaGGCTGAACCACCTAAAAGC +
Preference number: 3 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFYTMLS*AEPPKS
Trigger: GCTTTTAGGTGGTTCAGCCAAAGATAACATTGTATA...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR-3UTR CAA 90 bp CAAAAATATCAATTATCAAGAGACACAAACACAGTGAGGGAGATGCCCTCAATTGCTCTTATGTTGAGCTaGGAAGAGACAATTTGGTGC +
Preference number: 3 (lower is better)
Translates to: QKYQLSRDTNTVREMPSIALMLS*EETIWC
Trigger: GCACCAAATTGTCTCTTCCAAGCTCAACATAAGAGC...AATTGAGGGCATCTCCCTCACTGTGTTTGTGTCTCTTGATAATTGATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR TCA 72 bp TCAACAAAGCAGCTAGGACAACAGCAAAAGGAAGTGTaGAGACCTATATTCTTTACACATGACCTCAGATAT +
Preference number: 3 (lower is better)
Translates to: STKQLGQQQKEV*RPIFFTHDLRY
Trigger: ATATCTGAGGTCATGTGTAAAGAATATAGGTCTTCACACTTCCTTTTGCTGTTGTCCTAGCTGCTTTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR GCA 72 bp GAGATGTATTTGACACTAATTCAAGCTTCACGTCTATaGCAGGGATCACATGAGACAGGCATTTTGATTTTT +
Preference number: 3 (lower is better)
Translates to: EMYLTLIQASRL*QGSHETGILIF
Trigger: AAAAATCAAAATGCCTGTCTCATGTGATCCCTGGCATAGACGTGAAGCTTGAATTAGTGTCAAATACATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp TTATCCGTCTACATTCCAGCTGACATAGATTGGCACTaGAATTCAAGATCTGTACAGTTTTCATATCTGAAT +
Preference number: 3 (lower is better)
Translates to: LSVYIPADIDWH*NSRSVQFSYLN
Trigger: ATTCAGATATGAAAACTGTACAGATCTTGAATTCCAGTGCCAATCTATGTCAGCTGGAATGTAGACGGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CCA 72 bp AATGCACTTTTCATGAGAGATATACAATGTTATCTTTaGCTGAACCACCTAAAAGCTGTAGACACCATGATA +
Preference number: 3 (lower is better)
Translates to: NALFMRDIQCYL*LNHLKAVDTMI
Trigger: TATCATGGTGTCTACAGCTTTTAGGTGGTTCAGCCAAAGATAACATTGTATATCTCTCATGAAAAGTGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCTGGACACCAGCGCGGTaGGGCTCAGACTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSAWTPAR*GSDCRI
Trigger: AATCCTGCAGTCTGAGCCCCACCGCGCTGGTGTCCA...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GAGGTCCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTaGGGCTTCACAGTGAGACCCAGCATCCATGGACGC +
Preference number: 4 (lower is better)
Translates to: EVPGRGQKSEAC*GFTVRPSIHGR
Trigger: GCGTCCATGGATGCTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp CTCAGGAAGGGTCACCTGTCAGGGTCACCAGTGGTATaGGAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LRKGHLSGSPVV*EGVQQKPFVPC
Trigger: GCACGGGACAAAGGGCTTCTGCTGGACCCCCTCCAATACCACTGGTGACCCTGACAGGTGACCCTTCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR GCA 90 bp GAGGATGGGCCTCTATTTTCCCTTTGGACAGCTCTGCCTGGCTGGAAAGGCCGGCGGTGGGGCTCAGACTaGAGGATTACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EDGPLFSLWTALPGWKGRRWGSD*RITSSS
Trigger: GCTGGAGCTGGTAATCCTGCAGTCTGAGCCCCACCG...CCGGCCTTTCCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGGCCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GCAGATGACTCTGGAGTTGGGCAGGGATCGCTGGTGTaGCCTCTTCTGGTGCAGGGTTCCGCTAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ADDSGVGQGSLV*PLLVQGSAKGL
Trigger: CAGGCCTTTAGCGGAACCCTGCACCAGAAGAGGCAACACCAGCGATCCCTGCCCAACTCCAGAGTCATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGGAAGGCCACATAGAATaGCTTCCTCTGCAGCGCACC +
Preference number: 4 (lower is better)
Translates to: PRERSEIRSLLGLHSETQEGHIE*LPLQRT
Trigger: GGTGCGCTGCAGAGGAAGCCATTCTATGTGGCCTTC...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp CACCAGTGGTATTGGAGGGGGTCCAGCAGAAGCCCTTaGTCCCGTGCAGGCAGAAGCCATTTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HQWYWRGSSRSP*SRAGRSHFLPC
Trigger: ACAGGGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTCCAATACCACTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR TCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACCGACCAGCAGGTAGGTaGAGGTACAGGCGATCAAGG +
Preference number: 4 (lower is better)
Translates to: LPPTCPALVSCLRKESQNRPAGR*RYRRSR
Trigger: CCTTGATCGCCTGTACCTTCACCTACCTGCTGGTCG...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp AAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTGCTCTCACCCCAAGAGAGCCCGGCGAATTTCCACTaGACACCAGCGCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KMESPSEFDSSLLSPQESPANFH*TPARWG
Trigger: GCCCCACCGCGCTGGTGTCCAGTGGAAATTCGCCGG...GCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR GCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCAAGCGCACCCTTGGCCTaGAGGGCCACAAAATCGCCG +
Preference number: 4 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQASAPLA*RATKSP
Trigger: CGGCGATTTTGTGGCCCTGCAGGCCAAGGGTGCGCT...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR GCA 90 bp AAAATGGAGAGTCCTTCAGAATTTGACTCCTCCCTGCTCTCACCCCAAGAGAGCTGGCGTGGTGCCTCTTaGGTCTCTGAGGCGCACGGA +
Preference number: 4 (lower is better)
Translates to: KMESPSEFDSSLLSPQESWRGAS*VSEAHG
Trigger: TCCGTGCGCCTCAGAGACGCAAGAGGCACCACGCCA...GCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp CACCTGTCAAGGACAGAGGTTGGTCCCAGATGTATAAAATACTGGCCCCAAGCATCCTCGCGCATCTCATaGTCCGACTCGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: HLSRTEVGPRCIKYWPQASSRIS*SDSRAS
Trigger: CGACGCCCTCGAGTCGGACCATGAGATGCGCGAGGA...TGCTTGGGGCCAGTATTTTATACATCTGGGACCAACCTCTGTCCTTGACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR GCA 90 bp TTCCACCTTGTCGCACAACACACCTGCACACAGAAGCGCACACGCTCATATTACCCCCAAGGCACAGGGTaGCCATGCAGGAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: FHLVAQHTCTQKRTRSYYPQGTG*PCRKRS
Trigger: GCTTCTTTTCCTGCATGGGCACCCTGTGCCTTGGGG...GTAATATGAGCGTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp CGTGAGAAGGGAAGTGAATGCCTGATCCTTTCCACCTaGTCGCACAACACACCTGCACACAGAAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: REKGSECLILST*SHNTPAHRSAH
Trigger: GTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAAAGGATCAGGCATTCACTTCCCTTCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GAGGAGATTGTGTGGTGGTCATCACCACTCATGAGGTaGCTGCTAGGTGCCAAGATGGCCCAACAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EEIVWWSSPLMR*LLGAKMAQQVC
Trigger: GCAAACCTGTTGGGCCATCTTGGCACCTAGCAGCAACCTCATGAGTGGTGATGACCACCACACAATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GCTCTGTGCAACAGGATAAATGAAAGCATCCATGCCTaGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: ALCNRINESIHA*PPTCPALVSCL
Trigger: TAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAAGGCATGGATGCTTTCATTTATCCTGTTGCACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCGACAGACACTCTTCTTaGATTTCCAGCAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSADRHSS*ISSKNL
Trigger: GAGATTCTTGCTGGAAATCCAAGAAGAGTGTCTGTC...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GAGACATCACTACGGGTAGTCAGTCAAAGACTTCAGTaGGCCATCCTCCCAGCTCTGTCTTGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ETSLRVVSQRLQ*AILPALSWCSC
Trigger: ACAGGAGCACCAAGACAGAGCTGGGAGGATGGCCAACTGAAGTCTTTGACTGACTACCCGTAGTGATGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GTCCATCCACAGGAGCCTCTGGAAAGGGAGTGGCCTTaGATGAGTGGGGATGAGGGAAGAATTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: VHPQEPLEREWP*MSGDEGRIHLC
Trigger: ACACAAGTGAATTCTTCCCTCATCCCCACTCATCAAAGGCCACTCCCTTTCCAGAGGCTCCTGTGGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp TTGCCACCAACGTGCCCAGCCCTGGTCAGCTGCTTAAGGAAAGAAAGCCAGAACCATCTTTACCCCAGTTaGTACCAGGGAAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LPPTCPALVSCLRKESQNHLYPS*YQGSRD
Trigger: ATCTCTGCTTCCCTGGTACCAACTGGGGTAAAGATG...GTTCTGGCTTTCTTTCCTTAAGCAGCTGACCAGGGCTGGGCACGTTGGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp CTTCACAGTGAGACCCAGCATCCATGGACGCCTCTCTaGAAGATGCAGTTAGGTCCCCTAACAGAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LHSETQHPWTPL*KMQLGPLTEEN
Trigger: GTTTTCCTCTGTTAGGGGACCTAACTGCATCTTCAAGAGAGGCGTCCATGGATGCTGGGTCTCACTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp AAGAATCTGGGTGCTTGGCCACTCAGGTGGCTGCCATaGTGTGAAGGAAGAGAAGACTGCTTTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KNLGAWPLRWLP*CEGREDCFGLQ
Trigger: TTGGAGACCAAAGCAGTCTTCTCTTCCTTCACACAATGGCAGCCACCTGAGTGGCCAAGCACCCAGATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR TCA 90 bp TCTGGGAATATCATCGGCTGCATGTGCTTCTCTGGCTTACCTCAGACCATCACATGCCACAGCACTTCTTaGTACGTTTCAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SGNIIGCMCFSGLPQTITCHSTS*YVSAGS
Trigger: GCTACCTGCTGAAACGTATCAAGAAGTGCTGTGGCA...TGTGATGGTCTGAGGTAAGCCAGAGAAGCACATGCAGCCGATGATATTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR GCA 90 bp TTCCACCTTGTCGCACAACACACCTGCACACAGAAGCGCACACGCTCATATTACAGCATCAGTTCCAGGTaGAGCATGTCCATATCCGAT +
Preference number: 4 (lower is better)
Translates to: FHLVAQHTCTQKRTRSYYSISSR*SMSISD
Trigger: ATCGGATATGGACATGCTGCACCTGGAACTGATGCT...GTAATATGAGCGTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR GCA 90 bp GTTGAGCTTGGAAGAGACAATTTGGTGCCCTTCCCTCCAAAGCTGAACTGGCAAACATACAGAAGGCCTTaGCAGCATCAGTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VELGRDNLVPFPPKLNWQTYRRP*QHQFQV
Trigger: CACCTGGAACTGATGCTGGCAAGGCCTTCTGTATGT...TTGCCAGTTCAGCTTTGGAGGGAAGGGCACCAAATTGTCTCTTCCAAGCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp AAGCAACAGATGGTTGATGTGAAGGGAGGCCTCTTGTaGGGCCAAGTGGACATACATTTCCAGGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KQQMVDVKGGLL*GQVDIHFQELL
Trigger: GAGCAACTCCTGGAAATGTATGTCCACTTGGCCCAACAAGAGGCCTCCCTTCACATCAACCATCTGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CCA 90 bp GTCCTAGACGAAGGGAATATTTCAACAAGGGGTGTAGCATTAAGTGCATGCATTTCTGCAGCGCACCCTTaGCCTGCAGGGCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: VLDEGNISTRGVALSACISAAHP*PAGPQN
Trigger: ATTTTGTGGCCCTGCAGGCCAAGGGTGCGCTGCAGA...AATGCATGCACTTAATGCTACACCCCTTGTTGAAATATTCCCTTCGTCTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp AAGCCAAGACTCATTCCTTCCCTTGGTGCTCTTATGTaGAGCTTGGAAGAGACAATTTGGTGCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KPRLIPSLGALM*SLEETIWCPSL
Trigger: GAGGGAAGGGCACCAAATTGTCTCTTCCAAGCTCAACATAAGAGCACCAAGGGAAGGAATGAGTCTTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GGTTTGGTTAACTGGAGGGAAGGGTACAACAATCACTaGGCTAAAAGAAGCTGCCAAGTGCACAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GLVNWREGYNNH*AKRSCQVHNRG
Trigger: CCCTCTGTTGTGCACTTGGCAGCTTCTTTTAGCCAAGTGATTGTTGTACCCTTCCCTCCAGTTAACCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp ACAAAGCAACAGATGGTTGATGTGAAGGGAGGCCTCTaGTTGGGCCAAGTGGACATACATTTCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: TKQQMVDVKGGL*LGQVDIHFQEL
Trigger: CAACTCCTGGAAATGTATGTCCACTTGGCCCAACAAGAGGCCTCCCTTCACATCAACCATCTGTTGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp AGATACTCTTGGGTCCCACCTATTTCCCTGTTTACCTaGACATCTCCAGCTGCAGGGAAAACTTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RYSWVPPISLFT*TSPAAGKTSGT
Trigger: AGTTCCAGAAGTTTTCCCTGCAGCTGGAGATGTCAAGGTAAACAGGGAAATAGGTGGGACCCAAGAGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp CTTTGGCCAAGAGAGTCTAAGGTTCACAGACTCCTTTaGAAGGTCCCGTGTCCTAGACGAAGGGAATATTTC +
Preference number: 4 (lower is better)
Translates to: LWPRESKVHRLL*KVPCPRRREYF
Trigger: GAAATATTCCCTTCGTCTAGGACACGGGACCTTCAAAAGGAGTCTGTGAACCTTAGACTCTCTTGGCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp TACTCCCATATGGTAAAATGGAGAGTCCTTCAGAATTaGACTCCTCCCTGCTCTCACCCCAAGAGAGCACAT +
Preference number: 4 (lower is better)
Translates to: YSHMVKWRVLQN*TPPCSHPKRAH
Trigger: ATGTGCTCTCTTGGGGTGAGAGCAGGGAGGAGTCAAATTCTGAAGGACTCTCCATTTTACCATATGGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp CTCTTGTTGGGCCAAGTGGACATACATTTCCAGGAGTaGCTCGGTAAACACTCACATGTAGTTCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: LLLGQVDIHFQE*LGKHSHVVLTS
Trigger: GCTTGTGAGAACTACATGTGAGTGTTTACCGAGCAACTCCTGGAAATGTATGTCCACTTGGCCCAACAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp TGGCCTTTGATGAGTGGGGATGAGGGAAGAATTCACTaGTGTGAAGGGCTAAACATGACAACAGCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: WPLMSGDEGRIH*CEGLNMTTAVD
Trigger: GTCAACTGCTGTTGTCATGTTTAGCCCTTCACACAAGTGAATTCTTCCCTCATCCCCACTCATCAAAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp TCCTCATCTAGGATGCCTTCTGGTCCTGATAAGACCTaGACTCTGGAGGAAATGCAGCTACCATTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SSSRMPSGPDKT*TLEEMQLPFSE
Trigger: TTCTGAAAATGGTAGCTGCATTTCCTCCAGAGTCAAGGTCTTATCAGGACCAGAAGGCATCCTAGATGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp AGGTTGATAAATCCAACCTTGCAGGGTTTAGCTAGTTaGGAAGCAGCCTCTAGGAGACTGCGTATGAAATTG +
Preference number: 4 (lower is better)
Translates to: RLINPTLQGLAS*EAASRRLRMKL
Trigger: CAATTTCATACGCAGTCTCCTAGAGGCTGCTTCCAAACTAGCTAAACCCTGCAAGGTTGGATTTATCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp TGTGTGACCAGATCATCCAAACCAAAGGTCCTCATCTaGTGCAAAATCCCCACCATAACTAGACCATCAGAT +
Preference number: 4 (lower is better)
Translates to: CVTRSSKPKVLI*CKIPTITRPSD
Trigger: ATCTGATGGTCTAGTTATGGTGGGGATTTTGCACAAGATGAGGACCTTTGGTTTGGATGATCTGGTCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp AGGGAACAACAAGACAAGCAGGTGTGGGGTGTGATCTaGGATGGCATCTTAGATTCACAAACAAGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: REQQDKQVWGVI*DGILDSQTSSV
Trigger: TACTGAACTTGTTTGTGAATCTAAGATGCCATCCAAGATCACACCCCACACCTGCTTGTCTTGTTGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GCCATTCCATCTTCTATAGAGGAAATGAGAAATGACTaGCCAAGGCCCTGTGACCCAACTGTATATAAGGAA +
Preference number: 4 (lower is better)
Translates to: AIPSSIEEMRND*PRPCDPTVYKE
Trigger: TTCCTTATATACAGTTGGGTCACAGGGCCTTGGCAAGTCATTTCTCATTTCCTCTATAGAAGATGGAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp ACATCTCAAACAAGTGAACTGAGAAAGACCTCGAAGTaGGAATATGTCAACTTTGGCCAAGAGAGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: TSQTSELRKTSK*EYVNFGQESLR
Trigger: CCTTAGACTCTCTTGGCCAAAGTTGACATATTCCAACTTCGAGGTCTTTCTCAGTTCACTTGTTTGAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
3UTR CAA 72 bp GAATGCACTTTTCATGAGAGATATACAATGTTATCTTaGGCTGAACCACCTAAAAGCTGTAGACACCATGAT +
Preference number: 4 (lower is better)
Translates to: ECTFHERYTMLS*AEPPKSCRHHD
Trigger: ATCATGGTGTCTACAGCTTTTAGGTGGTTCAGCCAAAGATAACATTGTATATCTCTCATGAAAAGTGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp GAGGGGGTCCAGCAGAAGCCCTTTGTCCCGTGCAGGCAGAAGCCATTTTCTGCCCTCTGCAGCGCACCCTaGGCCTGCAGGGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: EGVQQKPFVPCRQKPFSALCSAP*ACRATK
Trigger: TTTTGTGGCCCTGCAGGCCAAGGGTGCGCTGCAGAG...GGCAGAAAATGGCTTCTGCCTGCACGGGACAAAGGGCTTCTGCTGGACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 90 bp AGACGGACTTCTTCGGCTTTAAGTTTCTCCTCCTCGCGCATCTCATaGTCCGACTCGAGGGCGTCGAACACCGCGGCACCGACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RRTSSALSFSSSRIS*SDSRASNTAAPTSR
Trigger: CCTGCTGGTCGGTGCCGCGGTGTTCGACGCCCTCGAGTCGGACCATGAGATGCGCGAGGAGGAGAAACTTAAAGCCGAAGAAGTCCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp GAGGATGGGCCTCTATTTTCCCTTTGGACAGCTCTGCCTGGCTGGAAAGGCCGGGAGCTGATGTTGTACTaGCCTCTGAGACGGACTTCT +
Preference number: 5 (lower is better)
Translates to: EDGPLFSLWTALPGWKGRELMLY*PLRRTS
Trigger: AGAAGTCCGTCTCAGAGGCAAGTACAACATCAGCTC...CCGGCCTTTCCAGCCAGGCAGAGCTGTCCAAAGGGAAAATAGAGGCCCATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp CCCCGGGAGAGGTCAGAAATCCGAAGCCTGCTTGGGCTTCACAGTGAGACCCAGATAGAAACTTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: PRERSEIRSLLGLHSETQIETSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGAAGTTTCTAT...CTGGGTCTCACTGTGAAGCCCAAGCAGGCTTCGGATTTCTGACCTCTCCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp ATAAGGAGGAAAGAGAATTCGCTCTACAGCCCTTTACCTTGCAGAAGGAGGGGGCGCAGGACCACAAGATaGAGGAAGGCACCGATGACG +
Preference number: 5 (lower is better)
Translates to: IRRKENSLYSPLPCRRRGRRTTR*RKAPMT
Trigger: CGTCATCGGTGCCTTCCTCAATCTTGTGGTCCTGCG...CCCCCTCCTTCTGCAAGGTAAAGGGCTGTAGAGCGAATTCTCTTTCCTCCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp TTCCACCTTGTCGCACAACACACCTGCACACAGAAGCGCACACGCTCATATTACAACATACAGAAGGCCTaGCCAGCATCAGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: FHLVAQHTCTQKRTRSYYNIQKA*PASVPG
Trigger: ACCTGGAACTGATGCTGGCAAGGCCTTCTGTATGTT...GTAATATGAGCGTGTGCGCTTCTGTGTGCAGGTGTGTTGTGCGACAAGGTGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 90 bp CGACGACATCATCATCATCATCATCGTCATCATCTTTACCCCAGTTaGTACCAGGGAAGCAGAGATAGCACAGGGTTCTGCCGTATTTCC +
Preference number: 5 (lower is better)
Translates to: RRHHHHHHRHHLYPS*YQGSRDSTGFCRIS
Trigger: GGAAATACGGCAGAACCCTGTGCTATCTCTGCTTCCCTGGTACCAACTGGGGTAAAGATGATGACGATGATGATGATGATGATGTCGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp TTCTGCCTCACTGGCTTCCCGCTCACTGCATTTTTCCTGTTTCGTTTGATTTTTTCATCTTTACCCCAGTaGGTACCAGGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: FCLTGFPLTAFFLFRLIFSSLPQ*VPGKQR
Trigger: TCTCTGCTTCCCTGGTACCAACTGGGGTAAAGATGA...AAAAATCAAACGAAACAGGAAAAATGCAGTGAGCGGGAAGCCAGTGAGGCAGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS-3UTR CAA 90 bp GGGGTGACATGGGTTTCATCTCTTCTGTACCAGTGTGTATCTAAGAGATACCTGGGACAGACACTCTTCTaGGATTTCCAGCAAGAATCT +
Preference number: 5 (lower is better)
Translates to: GVTWVSSLLYQCVSKRYLGQTLF*DFQQES
Trigger: AGATTCTTGCTGGAAATCCAAGAAGAGTGTCTGTCC...CAGGTATCTCTTAGATACACACTGGTACAGAAGAGATGAAACCCATGTCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 72 bp TCTTCGGCTTTAAGTTTCTCCTCCTCGCGCATCTCATaGTCCGACTCGAGGGCGTCGAACACCGCGGCACCG +
Preference number: 6 (lower is better)
Translates to: SSALSFSSSRIS*SDSRASNTAAP
Trigger: CGGTGCCGCGGTGTTCGACGCCCTCGAGTCGGACCATGAGATGCGCGAGGAGGAGAAACTTAAAGCCGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 72 bp AAGGAACCGGCGAATTTCCACTGGACACCAGCGCGGTaGGGCTCAGACTGCAGGATTACCAGCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: KEPANFHWTPAR*GSDCRITSSSC
Trigger: GCAGCTGGAGCTGGTAATCCTGCAGTCTGAGCCCCACCGCGCTGGTGTCCAGTGGAAATTCGCCGGTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 72 bp GCCTATGGTCCCCGCAGGTGTGCATTCCAGGAGGAATaGCGCCGAAAACGGACCGGAAGTAGGTGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: AYGPRRCAFQEE*RRKRTGSRCSS
Trigger: TGAGGAACACCTACTTCCGGTCCGTTTTCGGCGCCATTCCTCCTGGAATGCACACCTGCGGGGACCATAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CAA 72 bp TCGGTATTCATGGTCAGGAATCGCAGGACCACAAGATaGAGGAAGGCACCGATGACGGTCAGGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SVFMVRNRRTTR*RKAPMTVRPTR
Trigger: CCTGGTGGGCCTGACCGTCATCGGTGCCTTCCTCAATCTTGTGGTCCTGCGATTCCTGACCATGAATACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CAA 90 bp CGTGGTGCCTCTTGCGTCTCTGAGGCGCACGGACAGACACTCTTCTaGGATTTCCAGCAAGAATCTCCGCAACTTCTCCCTCCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: RGASCVSEAHGQTLF*DFQQESPQLLPPVA
Trigger: AGCTACTGGAGGGAGAAGTTGCGGAGATTCTTGCTGGAAATCCAAGAAGAGTGTCTGTCCGTGCGCCTCAGAGACGCAAGAGGCACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 72 bp CTTGCGTCTCTGAGGCGCACGGACAGACACTCTTCTTaGATTTCCAGCAAGAATCTCCGCAACTTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LASLRRTDRHSS*ISSKNLRNFSL
Trigger: GAGGGAGAAGTTGCGGAGATTCTTGCTGGAAATCCAAGAAGAGTGTCTGTCCGTGCGCCTCAGAGACGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CAA 72 bp TCTTGCGTCTCTGAGGCGCACGGACAGACACTCTTCTaGGATTTCCAGCAAGAATCTCCGCAACTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: SCVSEAHGQTLF*DFQQESPQLLP
Trigger: AGGGAGAAGTTGCGGAGATTCTTGCTGGAAATCCAAGAAGAGTGTCTGTCCGTGCGCCTCAGAGACGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CAA 72 bp CCGACGGTCACCATGTTCTCCATAGAAACTTCAGTGTaGCGCATGCCACAGCACTTCTTGATACGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: PTVTMFSIETSV*RMPQHFLIRFS
Trigger: GCTGAAACGTATCAAGAAGTGCTGTGGCATGCGCAACACTGAAGTTTCTATGGAGAACATGGTGACCGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8
CDS CCA 72 bp CATCATCATCATCATCGTCATCATCTTTACCCCAGTTaGTACCAGGGAAGCAGAGATAGCACAGGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: HHHHHRHHLYPS*YQGSRDSTGFC
Trigger: GCAGAACCCTGTGCTATCTCTGCTTCCCTGGTACCAACTGGGGTAAAGATGATGACGATGATGATGATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044624.8