Pregenerated sensors for KCNK7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024936Ensembl transcript IDs: ENSMUST00000052448.4, ENSMUST00000236818.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCTGGAGGTGGCGAGCTaGAGGGCCCTCCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVLEVAS*RALQGL Trigger: CAGGCCCTGGAGGGCCCTCCAGCTCGCCACCTCCAG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTACCTGGGCCTGGAGGTaGCGAGCTGGAGGGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVTWAWR*RAGGPS Trigger: GGAGGGCCCTCCAGCTCGCCACCTCCAGGCCCAGGT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTGCCTGGACCTGGGCCTaGAGGTGGCGAGCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVAWTWA*RWRAGG Trigger: CCCTCCAGCTCGCCACCTCCAGGCCCAGGTCCAGGC...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCTCCAGGGCCTCAGGTaGCAAGCAGGCCCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVLQGLR*QAGPVL Trigger: GAGCACAGGGCCTGCTTGCCACCTGAGGCCCTGGAG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR TCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTTGTAGCAGAGCAGCCTaGGCTGGTGCCAGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVCSRAA*AGASCQ Trigger: CTGGCAGCTGGCACCAGCTCAGGCTGCTCTGCTACA...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTAGCAGCCTGAGCTGGTaGCAGCTGCCAGCGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVSSLSW*QLPANG Trigger: GCCATTCGCTGGCAGCTGGCACCAGCTCAGGCTGCT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCCCATGGCCAGCAGGTaGGCCATAAGCAGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVPMASR*AISRSR Trigger: CCTGCTCCTGCTTATGGCCCACCTGCTGGCCATGGG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTAGTTCAGCCTGGACCTaGGCCTGGAGGTGGCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVSSAWT*AWRWRA Trigger: AGCTCGCCACCTCCAGGCCCAGGTCCAGGCTGAACT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCTAGCCAGTTCAGCCTaGACCTGGGCCTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVLASSA*TWAWRW Trigger: CCACCTCCAGGCCCAGGTCCAGGCTGAACTGGCTAG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCCAGCTGCCAGCGAATaGCTACCCAGTCACCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVPAASE*LPSHLG Trigger: GCCCAGGTGACTGGGTAGCCATTCGCTGGCAGCTGG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTTTCCTGTCGCCTGACTaGGGTCAGCAGGCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVFLSPD*GQQAGV Trigger: GACCCCAGCCTGCTGACCCCAGTCAGGCGACAGGAA...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR TCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTGAAGGCCTTTCCACCTaGGGAGAGTGGGGCCATGTG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVEGLST*GEWGHV Trigger: CACATGGCCCCACTCTCCTCAGGTGGAAAGGCCTTC...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR TCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTGTGCTGGCAGCAGCATaGAGACACAGGCCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVVLAAA*RHRPPG Trigger: TCCTGGTGGCCTGTGTCTTCATGCTGCTGCCAGCAC...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR TCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTACCATGGCACGGACCTaGGGCAGCTCTGAGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVTMART*GSSEKV Trigger: GACCTTCTCAGAGCTGCCTCAGGTCCGTGCCATGGT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTGCAGGCCCTGTGCTCTaGCTGGAAGCTAGCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVAGPVL*LEASQF Trigger: GAACTGGCTAGCTTCCAGGCAGAGCACAGGGCCTGC...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTACAGGCAGCAAGCAGTaGCGCAGGGCAGCCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVTGSKQ*RRAATS Trigger: ACTTGTGGCTGCCCTGCGCCACTGCTTGCTGCCTGT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCAGAGCAGCCTGAGCTaGTGCCAGCTGCCAGCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVQSSLS*CQLPAN Trigger: ATTCGCTGGCAGCTGGCACCAGCTCAGGCTGCTCTG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTTGCAGGCCACGTCCATaGGCAGGCAGCAAGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVCRPRP*AGSKSP Trigger: AGGAGACTTGCTGCCTGCCCATGGACGTGGCCTGCA...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR TCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCCAGTTGCTTGTCTCTaGGCTGTTGCCCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVPVACL*AVAQAG Trigger: TCCAGCCTGGGCAACAGCTCAGAGACAAGCAACTGG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTTGGCTTCTAGCAGGCTaGAGTCACCCTGTACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVWLLAG*SHPVHP Trigger: GGGGTGTACAGGGTGACTGCAGCCTGCTAGAAGCCA...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTAGGCTGGAAACTCCATaGGCCTGTGCTCTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVRLETP*ACALRT Trigger: GGTCCTGAGAGCACAGGCCCATGGAGTTTCCAGCCT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTAGCTGTTGCCCAGGCTaGAAACTCCATGGGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVSCCPG*KLHGPV Trigger: CACAGGCCCATGGAGTTTCCAGCCTGGGCAACAGCT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR TCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTAGTGAACAGCAGAGCTaGGGGCAGATCCCAGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVSEQQS*GQIPVA Trigger: AGCAACTGGGATCTGCCCTCAGCTCTGCTGTTCACT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCGTCAGGCAGCACAGTaGTCAGAGCCAGCTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVRQAAQ*SEPAHL Trigger: AAGATGAGCTGGCTCTGAGCACTGTGCTGCCTGACG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCCACAGCACCAGTGCTaGCAGCAGCATGAAGACACA | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVPQHQC*QQHEDT Trigger: TGTGTCTTCATGCTGCTGCCAGCACTGGTGCTGTGG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCTACTGCTAACAACATaGCCAGGAGCCCCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVLLLTT*PGAPGA Trigger: TGCTCCTGGGGCTCCTGGCCATGTTGTTAGCAGTAG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTAGGGCAGATCCCAGTTaGTTGTCTCTGAGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVRADPS*LSLSCC Trigger: GCAACAGCTCAGAGACAAGCAACTGGGATCTGCCCT...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTTTGTCTCTGAGCTGTTaGCCAGGCTGGAAACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVLSLSC*PGWKLH Trigger: ATGGAGTTTCCAGCCTGGGCAACAGCTCAGAGACAA...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS-3UTR CCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCAAAGAATTTCACCATaGCACGGACCTGAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVQRISP*HGPEAA Trigger: AGCTGCCTCAGGTCCGTGCCATGGTGAAATTCTTTG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCATCTTGGCCTAGGATaGCATCTTGATCTTCATCGG | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVHLGLG*HLDLHR Trigger: CCGATGAAGATCAAGATGGCATCCTAGGCCAAGATG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS-3UTR GCA 90 bp | AAATTAACATTATCCCATGACATATTCATTCCCATAACCCCTTCCTGCTATGTTCAAGTAACCAAGAAGTaGAAACTGCCCAAGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: KLTLSHDIFIPITPSCYVQVTKK*KLPKVV Trigger: TACCACCTTGGGCAGTTTGCACTTCTTGGTTACTTG...AACATAGCAGGAAGGGGTTATGGGAATGAATATGTCATGGGATAATGTTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS TCA 90 bp | CAGGCCACCAGGAGGCCCAGTCCTGCTGCCTGTAGCAGAGCAGCCTaGGCTGGTGCCAGCTGCCAGCGAATGGCTACCCAGTCACCTGGG | + |
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Preference number: 5 (lower is better) Translates to: QATRRPSPAACSRAA*AGASCQRMATQSPG Trigger: CCCAGGTGACTGGGTAGCCATTCGCTGGCAGCTGGCACCAGCTCAGGCTGCTCTGCTACAGGCAGCAGGACTGGGCCTCCTGGTGGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS TCA 90 bp | CTGGTGCCAGCTGCCAGCGAATGGCTACCCAGTCACCTGGGCGACTaGACACAGGCAGCAAGCAGTGGCGCAGGGCAGCCACAAGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: LVPAASEWLPSHLGD*TQAASSGAGQPQVL Trigger: TAGCACTTGTGGCTGCCCTGCGCCACTGCTTGCTGCCTGTGTTCAGTCGCCCAGGTGACTGGGTAGCCATTCGCTGGCAGCTGGCACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS GCA 90 bp | ACAGCAGAGCTGAGGGCAGATCCCAGTTGCTTGTCTCTGAGCTGTTaGCCAGGCTGGAAACTCCATGGGCCTGTGCTCTCAGGACCGCAC | + |
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Preference number: 5 (lower is better) Translates to: TAELRADPSCLSLSC*PGWKLHGPVLSGPH Trigger: GTGCGGTCCTGAGAGCACAGGCCCATGGAGTTTCCAGCCTGGGCAACAGCTCAGAGACAAGCAACTGGGATCTGCCCTCAGCTCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS TCA 90 bp | GGCCACGTCCATGGGCAGGCAGCAAGTCTCCTAGGCCGATCGTGCTaGGTGAGCCGAAACAGAAGTAGATGGCTTCTAGCAGGCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GHVHGQAASLLGRSC*VSRNRSRWLLAGCS Trigger: ACTGCAGCCTGCTAGAAGCCATCTACTTCTGTTTCGGCTCACTCAGCACGATCGGCCTAGGAGACTTGCTGCCTGCCCATGGACGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS CCA 90 bp | GCTCAGGTCCCCCAACACGATCGAGCTGACTTCCTGTCGCCTGACTaGGGTCAGCAGGCTGGGGTCTGTTCTGATGTTCTGATACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AQVPQHDRADFLSPD*GQQAGVCSDVLILR Trigger: CCTCAGTATCAGAACATCAGAACAGACCCCAGCCTGCTGACCCCAGTCAGGCGACAGGAAGTCAGCTCGATCGTGTTGGGGGACCTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS CCA 90 bp | CCAGGAGCAAGTAACCAAGAAGTGCAAACTGCCCAAGGTGGTAAATaGCTGGGTGCAGGCCACGTCCATGGGCAGGCAGCAAGTCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: PGASNQEVQTAQGGK*LGAGHVHGQAASLL Trigger: TAGGAGACTTGCTGCCTGCCCATGGACGTGGCCTGCACCCAGCCATTTACCACCTTGGGCAGTTTGCACTTCTTGGTTACTTGCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS TCA 90 bp | AGCACAGTGCTCAGAGCCAGCTCATCTTGGCCTAGGATGCCATCTTaGTCTTCATCGGTTCTAGAGCCACTGGGCCCAAAGAATTTCACC | + |
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Preference number: 5 (lower is better) Translates to: STVLRASSSWPRMPS*SSSVLEPLGPKNFT Trigger: GGTGAAATTCTTTGGGCCCAGTGGCTCTAGAACCGATGAAGATCAAGATGGCATCCTAGGCCAAGATGAGCTGGCTCTGAGCACTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS CCA 72 bp | GCCCTGTGCTCTGCCTGGAAGCTAGCCAGTTCAGCCTaGACCTGGGCCTGGAGGTGGCGAGCTGGAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ALCSAWKLASSA*TWAWRWRAGGP Trigger: GGGCCCTCCAGCTCGCCACCTCCAGGCCCAGGTCCAGGCTGAACTGGCTAGCTTCCAGGCAGAGCACAGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS GCA 72 bp | CTCCAGGGCCTCAGGTGGCAAGCAGGCCCTGTGCTCTaGCTGGAAGCTAGCCAGTTCAGCCTGGACCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LQGLRWQAGPVL*LEASQFSLDLG Trigger: GCCCAGGTCCAGGCTGAACTGGCTAGCTTCCAGGCAGAGCACAGGGCCTGCTTGCCACCTGAGGCCCTGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS CCA 72 bp | AGGGCCTCAGGTGGCAAGCAGGCCCTGTGCTCTGCCTaGAAGCTAGCCAGTTCAGCCTGGACCTGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RASGGKQALCSA*KLASSAWTWAW Trigger: CCAGGCCCAGGTCCAGGCTGAACTGGCTAGCTTCCAGGCAGAGCACAGGGCCTGCTTGCCACCTGAGGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS TCA 72 bp | GCTGCCAGCGAATGGCTACCCAGTCACCTGGGCGACTaGACACAGGCAGCAAGCAGTGGCGCAGGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AASEWLPSHLGD*TQAASSGAGQP Trigger: TGGCTGCCCTGCGCCACTGCTTGCTGCCTGTGTTCAGTCGCCCAGGTGACTGGGTAGCCATTCGCTGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS TCA 72 bp | AGGAGGCCCAGTCCTGCTGCCTGTAGCAGAGCAGCCTaGGCTGGTGCCAGCTGCCAGCGAATGGCTACCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRPSPAACSRAA*AGASCQRMATQ Trigger: CTGGGTAGCCATTCGCTGGCAGCTGGCACCAGCTCAGGCTGCTCTGCTACAGGCAGCAGGACTGGGCCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS GCA 72 bp | CAGGCTGCAGTCACCCTGTACACCCCACAGCACCAGTaGTGGCAGCAGCATGAAGACACAGGCCACCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QAAVTLYTPQHQ*WQQHEDTGHQE Trigger: CTCCTGGTGGCCTGTGTCTTCATGCTGCTGCCAGCACTGGTGCTGTGGGGTGTACAGGGTGACTGCAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS GCA 72 bp | TGGTTGGTCCCAAGACTGGGGCGTCAGGCAGCACAGTaGTCAGAGCCAGCTCATCTTGGCCTAGGATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: WLVPRLGRQAAQ*SEPAHLGLGCH Trigger: ATGGCATCCTAGGCCAAGATGAGCTGGCTCTGAGCACTGTGCTGCCTGACGCCCCAGTCTTGGGACCAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS CAA 90 bp | AACAGCAGAGCTGAGGGCAGATCCCAGTTGCTTGTCTCTGAGCTGTaGCCCAGGCTGGAAACTCCATGGGCCTGTGCTCTCAGGACCGCA | + |
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Preference number: 6 (lower is better) Translates to: NSRAEGRSQLLVSEL*PRLETPWACALRTA Trigger: TGCGGTCCTGAGAGCACAGGCCCATGGAGTTTCCAGCCTGGGCAACAGCTCAGAGACAAGCAACTGGGATCTGCCCTCAGCTCTGCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS GCA 72 bp | CTGAGGGCAGATCCCAGTTGCTTGTCTCTGAGCTGTTaGCCAGGCTGGAAACTCCATGGGCCTGTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRADPSCLSLSC*PGWKLHGPVLS Trigger: TGAGAGCACAGGCCCATGGAGTTTCCAGCCTGGGCAACAGCTCAGAGACAAGCAACTGGGATCTGCCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052448.4 |
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| CDS CCA 72 bp | ACCAAGAAGTGCAAACTGCCCAAGGTGGTAAATGGCTaGGTGCAGGCCACGTCCATGGGCAGGCAGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: TKKCKLPKVVNG*VQATSMGRQQV Trigger: GACTTGCTGCCTGCCCATGGACGTGGCCTGCACCCAGCCATTTACCACCTTGGGCAGTTTGCACTTCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS GCA 72 bp | GTGAGCCGAAACAGAAGTAGATGGCTTCTAGCAGGCTaGAGTCACCCTGTACACCCCACAGCACCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSRNRSRWLLAG*SHPVHPTAPVL Trigger: CAGCACTGGTGCTGTGGGGTGTACAGGGTGACTGCAGCCTGCTAGAAGCCATCTACTTCTGTTTCGGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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| CDS TCA 72 bp | CATGGGCAGGCAGCAAGTCTCCTAGGCCGATCGTGCTaGGTGAGCCGAAACAGAAGTAGATGGCTTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: HGQAASLLGRSC*VSRNRSRWLLA Trigger: TGCTAGAAGCCATCTACTTCTGTTTCGGCTCACTCAGCACGATCGGCCTAGGAGACTTGCTGCCTGCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052448.4 ENSMUST00000236818.2 |
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