Pregenerated sensors for KCNK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046410Ensembl transcript IDs: ENSMUST00000085818.6
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAGTTCCTTGCCTGTTAAGTCGTTGAGGGAGATGCTGGCCCCTTaGAGGCCTCTTCCCACAGGCCCTACGGCCCATAGACACCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: VSSLPVKSLREMLAP*RPLPTGPTAHRHLR Trigger: TCTCAGGTGTCTATGGGCCGTAGGGCCTGTGGGAAGAGGCCTGCAAGGGGCCAGCATCTCCCTCAACGACTTAACAGGCAAGGAACTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 90 bp | GATCTGGGCTCATATCCTGGGTCAGTTCCTTGCCTGTTAAGTCGTTaGGGGAGATGCTGGCCCCTTGCAGGCCTCTTCCCACAGGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: DLGSYPGSVPCLLSR*GRCWPLAGLFPQAL Trigger: TAGGGCCTGTGGGAAGAGGCCTGCAAGGGGCCAGCATCTCCCTCAACGACTTAACAGGCAAGGAACTGACCCAGGATATGAGCCCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 90 bp | CCCCTTGCAGGCCTCTTCCCACAGGCCCTACGGCCCATAGACACCTaGGAAGAAGGCAGAATTTCTTCTCTTGACTGGCAGGTCTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: PLAGLFPQALRPIDT*EEGRISSLDWQVLG Trigger: ACCCAAGACCTGCCAGTCAAGAGAAGAAATTCTGCCTTCTTCTCAGGTGTCTATGGGCCGTAGGGCCTGTGGGAAGAGGCCTGCAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 90 bp | GGTCCACTCCTCAGTCCTGACCACTCTGCCTCTTCCAGTGCCCACTaGAGTTTGTCACCATCAAGGGACAGCAAGTCAGTCAGTTTACCT | + |
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Preference number: 1 (lower is better) Translates to: GPLLSPDHSASSSAH*SLSPSRDSKSVSLP Trigger: AGGTAAACTGACTGACTTGCTGTCCCTTGATGGTGACAAACTCCAGTGGGCACTGGAAGAGGCAGAGTGGTCAGGACTGAGGAGTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 90 bp | CTGAGGCAGACGTGTTCCACCACTGTGAACATTCCTAGCTCCCTTTaGAGTTTTGTGGTGTCATTATCGGTTGCCCAGGCTAGCCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: LRQTCSTTVNIPSSL*SFVVSLSVAQASLA Trigger: GGCTAGGCTAGCCTGGGCAACCGATAATGACACCACAAAACTCCAAAGGGAGCTAGGAATGTTCACAGTGGTGGAACACGTCTGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 90 bp | GCTTATTTTATCACCTGGCTCCTGCTGTGTATCCCATCCTGCCTTTaGACTCTCAAGCCTCCTGCTTCAGCTCAGGCTACTGGTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: AYFITWLLLCIPSCL*TLKPPASAQATGTQ Trigger: CTGGGTACCAGTAGCCTGAGCTGAAGCAGGAGGCTTGAGAGTTCAAAGGCAGGATGGGATACACAGCAGGAGCCAGGTGATAAAATAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR GCA 90 bp | CTTTGGGTACTTTGGTTTTGGACCCTGGGACAAGGGATTGAGGTATaGATTTTACATATCAGAGCAGACCTGGCCTCCAGGTTCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LWVLWFWTLGQGIEV*ILHIRADLASRFSQ Trigger: CTGGGAGAACCTGGAGGCCAGGTCTGCTCTGATATGTAAAATGCATACCTCAATCCCTTGTCCCAGGGTCCAAAACCAAAGTACCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 90 bp | CCTACGGCCCATAGACACCTGAGAAGAAGGCAGAATTTCTTCTCTTaGCTGGCAGGTCTTGGGTTAGTTCTTGTCCCGTTTTCCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PTAHRHLRRRQNFFS*LAGLGLVLVPFSRK Trigger: TTTCCTGGAAAACGGGACAAGAACTAACCCAAGACCTGCCAGTCAAGAGAAGAAATTCTGCCTTCTTCTCAGGTGTCTATGGGCCGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 90 bp | CATTATGATTCCCCATTTAGCAGACACAGAGTCCCAAAGGTAGAGTaGCTGTCCAAATGCATTGGCAAAATATGGCCCAGTTACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: HYDSPFSRHRVPKVE*LSKCIGKIWPSYRA Trigger: TGCCCTGTAACTGGGCCATATTTTGCCAATGCATTTGGACAGTCACTCTACCTTTGGGACTCTGTGTCTGCTAAATGGGGAATCATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 90 bp | TACTGTGTGCCTAGCACAGAAAAGCATGGCAGAAGTGAAGGTCTGTaGATGAGTTTGAACATTCTTTGCATCTTATGGCTGGGATATAAA | + |
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Preference number: 1 (lower is better) Translates to: YCVPSTEKHGRSEGL*MSLNILCILWLGYK Trigger: TTTATATCCCAGCCATAAGATGCAAAGAATGTTCAAACTCATCCACAGACCTTCACTTCTGCCATGCTTTTCTGTGCTAGGCACACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR GCA 90 bp | AGTGGTTTGGTACTGAGCCAGCCTTCCTTAAAGTTCTCAGAATACTaGTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: SGLVLSQPSLKFSEY*LKFLLLALEITRLV Trigger: AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGAGAACTTTAAGGAAGGCTGGCTCAGTACCAAACCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CAA 90 bp | GGATCTGGGCTCATATCCTGGGTCAGTTCCTTGCCTGTTAAGTCGTaGAGGGAGATGCTGGCCCCTTGCAGGCCTCTTCCCACAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GSGLISWVSSLPVKS*REMLAPCRPLPTGP Trigger: AGGGCCTGTGGGAAGAGGCCTGCAAGGGGCCAGCATCTCCCTCAACGACTTAACAGGCAAGGAACTGACCCAGGATATGAGCCCAGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR TCA 90 bp | GTTGCCCAGGCTAGCCTAGCCTCAGGACTCTCCAGGCACACCCTCCACAGTGCTCCCAGTGGAGCTCTGTaGAAAGACAGGAGAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VAQASLASGLSRHTLHSAPSGAL*KDRRVC Trigger: ACACACTCTCCTGTCTTTTCACAGAGCTCCACTGGG...AGCACTGTGGAGGGTGTGCCTGGAGAGTCCTGAGGCTAGGCTAGCCTGGGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAAGCCACATCTACTACTGTGTGCCTAGCACAGAAAAGCATGGCAGAAGTGGGGCTCAAAGCCCCTaGCCAGGTGTGTCCAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: SPSHIYYCVPSTEKHGRSGAQSP*PGVSRS Trigger: CGACCTGGACACACCTGGGCAGGGGCTTTGAGCCCC...ACTTCTGCCATGCTTTTCTGTGCTAGGCACACAGTAGTAGATGTGGCTTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCCTACCTGACATATTCTTCCAGTGCCCACTaGAGTTTGTCACCATCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SRPGLQVLPASLSPYLTYSSSAH*SLSPSR Trigger: CCTTGATGGTGACAAACTCCAGTGGGCACTGGAAGA...ATATGTCAGGTAGGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCCTACCTGACATATGAGCTAAGTCTGCTATaGGGAGAAGAGAGGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: SRPGLQVLPASLSPYLTYELSLL*GEERLN Trigger: GTTCAGCCTCTCTTCTCCCCATAGCAGACTTAGCTC...ATATGTCAGGTAGGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCCTACCTGACATATTGCATTGGCAAAATATaGCCCAGTTACAGGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SRPGLQVLPASLSPYLTYCIGKI*PSYRAC Trigger: GCATGCCCTGTAACTGGGCCATATTTTGCCAATGCA...ATATGTCAGGTAGGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGCCCAGGCTAGCCTAGCCTCAGGACTCTCCAGGCACACCCTCCACAGTGCTAGAAGTGAAGGTCTGTaGATGAGTTTGAACATTCTT | + |
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Preference number: 2 (lower is better) Translates to: VAQASLASGLSRHTLHSARSEGL*MSLNIL Trigger: AAGAATGTTCAAACTCATCCACAGACCTTCACTTCT...AGCACTGTGGAGGGTGTGCCTGGAGAGTCCTGAGGCTAGGCTAGCCTGGGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CAA 90 bp | GCATCAAGCTCAGTCTCTCCCCACCCGGGTTCTGTCCAGTTACAATaGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASSSVSPHPGSVQLQ*NNQVVSVWLLSVAV Trigger: GACTGCAACTGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGAACCCGGGTGGGGAGAGACTGAGCTTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CAA 90 bp | GAGCCTGCCTGGCTAAGCCATCTTCCCAGCACCTATAATTGTAAATaGTTTTCTTTAGCACCTGAGGCAGACGTGTTCCACCACTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: EPAWLSHLPSTYNCK*FSLAPEADVFHHCE Trigger: TTCACAGTGGTGGAACACGTCTGCCTCAGGTGCTAAAGAAAACAATTTACAATTATAGGTGCTGGGAAGATGGCTTAGCCAGGCAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGGCCAGTTTCCCAATAAACCTGCCTTCAATATAATCCAAGCTGGCTTGGTTTTTGAGCCTGCCTaGCTAAGCCATCTTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: NQGQFPNKPAFNIIQAGLVFEPA*LSHLPS Trigger: GCTGGGAAGATGGCTTAGCCAGGCAGGCTCAAAAAC...CAAGCCAGCTTGGATTATATTGAAGGCAGGTTTATTGGGAAACTGGCCTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTGTCCAGTTACAATTGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCACTCTGCCTCTTCCAGTaGCCACTGGAGTTTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: GSVQLQLNNQVVSVWLLSLCLFQ*PLEFVT Trigger: GGTGACAAACTCCAGTGGGCACTGGAAGAGGCAGAG...TGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCACAGAGTTCTGCTTTCAGAACCAGGAATAGTCATCACTTCCCATTGCTCCTCACCTCCCAGTaGAGCTCTGTGAAAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SNSQSSAFRTRNSHHFPLLLTSQ*SSVKRQ Trigger: CTGTCTTTTCACAGAGCTCCACTGGGAGGTGAGGAG...CAATGGGAAGTGATGACTATTCCTGGTTCTGAAAGCAGAACTCTGTGAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR TCA 90 bp | AACCAAGGCCAGTTTCCCAATAAACCTGCCTTCAATATAATCCAAGCTGGCTTGAGAAATAACTCATTATaGAGCCGGGTGTGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: NQGQFPNKPAFNIIQAGLRNNSL*SRVWWC Trigger: GCACCACCACACCCGGCTTCATAATGAGTTATTTCT...CAAGCCAGCTTGGATTATATTGAAGGCAGGTTTATTGGGAAACTGGCCTTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTGCAGTCAAAATCCTTAAGTGGAAGGAGGAGAAAATaGCTGTGTCAGTGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TIRLFQSGFCQLQSKSLSGRRRK*LCQCPE Trigger: CTCAGGGCACTGACACAGTCATTTTCTCCTCCTTCC...ACTTAAGGATTTTGACTGCAACTGACAAAAGCCAGACTGAAACAACCTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATACTGCTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTTGTTGATCTAGTCACATaGGGCTCAAAGCCCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SEYCLKFLLLALEITRLVVDLVT*GSKPLP Trigger: GGGCAGGGGCTTTGAGCCCCATGTGACTAGATCAAC...AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGAATACTGCTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTTTCTGGGCATTCCAGTTaGTCTAGTCACATGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SEYCLKFLLLALEITRLVSGHSS*SSHMGL Trigger: GAGCCCCATGTGACTAGATCAACTGGAATGCCCAGA...AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCAGTTACAATTGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTGTCAGAAAGCCCACGTaGTCTGAGTCTGAGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVQLQLNNQVVSVWLLSVVRKPT*SESEKK Trigger: TTTCTTCTCAGACTCAGACCACGTGGGCTTTCTGAC...AACTGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCACAGAGTTCTGCTTTCAGAACCAGGAATAGTCATCACTTCCCATTGAACCTTTGTGTAGGGTaGAAGACTCACACATATGCA | + |
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Preference number: 2 (lower is better) Translates to: SNSQSSAFRTRNSHHFPLNLCVG*KTHTYA Trigger: TGCATATGTGTGAGTCTTCCACCCTACACAAAGGTT...CAATGGGAAGTGATGACTATTCCTGGTTCTGAAAGCAGAACTCTGTGAGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCCAGTTACAATTGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTCAGAATTTCTTCTCTTaGCTGGCAGGTCTTGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: SVQLQLNNQVVSVWLLSVQNFFS*LAGLGL Trigger: TAACCCAAGACCTGCCAGTCAAGAGAAGAAATTCTG...AACTGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTGTCCAGTTACAATTGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAACATCTACTACTGTGTaGCTAGCACAGAAAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: GSVQLQLNNQVVSVWLLSTSTTV*LAQKSM Trigger: CATGCTTTTCTGTGCTAGGCACACAGTAGTAGATGT...TGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR GCA 90 bp | TCAGAATACTGCTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTTACTGGTACCCAGTACTaGACCTGGTTGATGTCAACT | + |
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Preference number: 2 (lower is better) Translates to: SEYCLKFLLLALEITRLVTGTQY*TWLMST Trigger: AGTTGACATCAACCAGGTGCAGTACTGGGTACCAGT...AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATACTGCTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTTGCTTATTTTATCACCTaGCTCCTGCTGTGTATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SEYCLKFLLLALEITRLVAYFIT*LLLCIP Trigger: TGGGATACACAGCAGGAGCCAGGTGATAAAATAAGC...AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR GCA 90 bp | ACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTGCAGTCAAAATCCTTAAGTAGTTTGAACATTCTTTaGATCTTATGGCTGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: TIRLFQSGFCQLQSKSLSSLNIL*ILWLGY Trigger: ATATCCCAGCCATAAGATGCAAAGAATGTTCAAACT...ACTTAAGGATTTTGACTGCAACTGACAAAAGCCAGACTGAAACAACCTGATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CAA 90 bp | CTCACGCCACTTGGATCTGGGCTCATATCCTGGGTCAGTTCCTTGCCTGTTAAGGGAGATGCTGGCCCCTaGCAGGCCTCTTCCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LTPLGSGLISWVSSLPVKGDAGP*QASSHR Trigger: CCTGTGGGAAGAGGCCTGCAAGGGGCCAGCATCTCC...CTTAACAGGCAAGGAACTGACCCAGGATATGAGCCCAGATCCAAGTGGCGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CAA 90 bp | GTTGCCCAGGCTAGCCTAGCCTCAGGACTCTCCAGGCACACCCTCCACAGTGCTCTACTCCCCTTTAGCTaGGCACTATATTCCTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: VAQASLASGLSRHTLHSALLPFS*ALYSCD Trigger: ATCACAGGAATATAGTGCCAAGCTAAAGGGGAGTAG...AGCACTGTGGAGGGTGTGCCTGGAGAGTCCTGAGGCTAGGCTAGCCTGGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 72 bp | GACATAGGAGCAGAGGGACTACTCCTCACCTCCCAGTaGAGCTCTGTGAAAAGACAGGAGAGTGTGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: DIGAEGLLLTSQ*SSVKRQESVSG Trigger: CCCAGACACACTCTCCTGTCTTTTCACAGAGCTCCACTGGGAGGTGAGGAGTAGTCCCTCTGCTCCTATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 72 bp | ACCCCTCTCACGCCACTTGGATCTGGGCTCATATCCTaGGTCAGTTCCTTGCCTGTTAAGTCGTTGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TPLTPLGSGLIS*VSSLPVKSLRE Trigger: CTCCCTCAACGACTTAACAGGCAAGGAACTGACCCAGGATATGAGCCCAGATCCAAGTGGCGTGAGAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 72 bp | CATAGGACCAGGCTAAGTTACCCCTCTCACGCCACTTaGATCTGGGCTCATATCCTGGGTCAGTTCCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: HRTRLSYPSHAT*IWAHILGQFLA Trigger: GGCAAGGAACTGACCCAGGATATGAGCCCAGATCCAAGTGGCGTGAGAGGGGTAACTTAGCCTGGTCCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 72 bp | CAGAGGGACTACTCCTCACCTCCCAGTGGAGCTCTGTaGAAAGACAGGAGAGTGTGTCTGGGCATTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: QRDYSSPPSGAL*KDRRVCLGIPV Trigger: AACTGGAATGCCCAGACACACTCTCCTGTCTTTTCACAGAGCTCCACTGGGAGGTGAGGAGTAGTCCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 72 bp | ATCACCTGGCTCCTGCTGTGTATCCCATCCTGCCTTTaGACTCTCAAGCCTCCTGCTTCAGCTCAGGCTACT | + |
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Preference number: 3 (lower is better) Translates to: ITWLLLCIPSCL*TLKPPASAQAT Trigger: AGTAGCCTGAGCTGAAGCAGGAGGCTTGAGAGTTCAAAGGCAGGATGGGATACACAGCAGGAGCCAGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR GCA 72 bp | GTGTATCCCATCCTGCCTTTGAACTCTCAAGCCTCCTaGTTCAGCTCAGGCTACTGGTACCCAGTACTGCAC | + |
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Preference number: 3 (lower is better) Translates to: VYPILPLNSQAS*FSSGYWYPVLH Trigger: GTGCAGTACTGGGTACCAGTAGCCTGAGCTGAAGCAGGAGGCTTGAGAGTTCAAAGGCAGGATGGGATACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 72 bp | CCATCAAGGGACAGCAAGTCAGTCAGTTTACCTCACTaGCTGGTCACCCCAATAAGAGCAGAGCCCAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PSRDSKSVSLPH*LVTPIRAEPKP Trigger: TGGCTTGGGCTCTGCTCTTATTGGGGTGACCAGCCAGTGAGGTAAACTGACTGACTTGCTGTCCCTTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 72 bp | GCCTCCAGGTTCTCCCAGCATCCCTCAGTCCCTACCTaGCATATCCTGACCCCAAGCTTGAACTTTTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: ASRFSQHPSVPT*HILTPSLNFLA Trigger: AGCTAAAAAGTTCAAGCTTGGGGTCAGGATATGTCAGGTAGGGACTGAGGGATGCTGGGAGAACCTGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR-3UTR CAA 90 bp | CTAAGTCTGCTATGGGGAGAAGAGAGGCTGAACCCACGGCCACCACCCCTTCTGGTTTCAGTCTGGCTTTaGTCAGTTGCAGTCAAAATC | + |
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Preference number: 3 (lower is better) Translates to: LSLLWGEERLNPRPPPLLVSVWL*SVAVKI Trigger: GATTTTGACTGCAACTGACAAAAGCCAGACTGAAAC...CAGAAGGGGTGGTGGCCGTGGGTTCAGCCTCTCTTCTCCCCATAGCAGACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR TCA 72 bp | AAAAGGAAGGAGGAGAAAATGACTGTGTCAGTGCCCTaGGGAGCAGAGGACATAGGAGCAGAGGGACTACTC | + |
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Preference number: 3 (lower is better) Translates to: KRKEEKMTVSVP*GAEDIGAEGLL Trigger: GAGTAGTCCCTCTGCTCCTATGTCCTCTGCTCCTCAGGGCACTGACACAGTCATTTTCTCCTCCTTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 72 bp | TTGGCCAAGACAAAGCCACTAATACAGAGGCTAAAGTaGAGTCCAGGCCCAGAGCCCAGAAGAACTAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: LAKTKPLIQRLK*SPGPEPRRTRC Trigger: ACACCTAGTTCTTCTGGGCTCTGGGCCTGGACTCCACTTTAGCCTCTGTATTAGTGGCTTTGTCTTGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
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| 3UTR CCA 72 bp | CCAACACACCCAGTTCCCCCGTGTGACTTTCTACAGTaGTTTGGTACTGAGCCAGCCTTCCTTAAAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PTHPVPPCDFLQ*FGTEPAFLKVL Trigger: GAGAACTTTAAGGAAGGCTGGCTCAGTACCAAACCACTGTAGAAAGTCACACGGGGGAACTGGGTGTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | GGATTGAGGTATGCATTTTACATATCAGAGCAGACCTaGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GLRYAFYISEQT*PPGSPSIPQSL Trigger: TAGGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTCTGATATGTAAAATGCATACCTCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR GCA 72 bp | CTTTGGTTTTGGACCCTGGGACAAGGGATTGAGGTATaGATTTTACATATCAGAGCAGACCTGGCCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LWFWTLGQGIEV*ILHIRADLASR Trigger: CCTGGAGGCCAGGTCTGCTCTGATATGTAAAATGCATACCTCAATCCCTTGTCCCAGGGTCCAAAACCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | CAGAGTCCCAAAGGTAGAGTGACTGTCCAAATGCATTaGCAAAATATGGCCCAGTTACAGGGCATGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QSPKGRVTVQMH*QNMAQLQGMPR Trigger: TCTGGGCATGCCCTGTAACTGGGCCATATTTTGCCAATGCATTTGGACAGTCACTCTACCTTTGGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | TTGAACTCTCAAGCCTCCTGCTTCAGCTCAGGCTACTaGTACCCAGTACTGCACCTGGTTGATGTCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNSQASCFSSGY*YPVLHLVDVNF Trigger: AAAGTTGACATCAACCAGGTGCAGTACTGGGTACCAGTAGCCTGAGCTGAAGCAGGAGGCTTGAGAGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | ACGTGTTCCACCACTGTGAACATTCCTAGCTCCCTTTaGAGTTTTGTGGTGTCATTATCGGTTGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TCSTTVNIPSSL*SFVVSLSVAQA Trigger: AGCCTGGGCAACCGATAATGACACCACAAAACTCCAAAGGGAGCTAGGAATGTTCACAGTGGTGGAACACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR TCA 72 bp | AGATCGAGGGACGGGTCAGGCACTTTATTGACTCCCTaGTGGTGCTGTAGGGTAAGAGTTACAAGCATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSRDGSGTLLTP*WCCRVRVTSIR Trigger: TCTAATGCTTGTAACTCTTACCCTACAGCACCATCAGGGAGTCAATAAAGTGCCTGACCCGTCCCTCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | AGGGACTGGGGAGAAACTCAGGTTTTTGAGCCTGCCTaGCTAAGCCATCTTCCCAGCACCTATAATTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RDWGETQVFEPA*LSHLPSTYNCK Trigger: TTTACAATTATAGGTGCTGGGAAGATGGCTTAGCCAGGCAGGCTCAAAAACCTGAGTTTCTCCCCAGTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR-3UTR CAA 90 bp | TCAAACTCACAGAGTTCTGCTTTCAGAACCAGGAATAGTCATCACTTCCCATTGAGTGCCCACTGGAGTTaGTCACCATCAAGGGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNSQSSAFRTRNSHHFPLSAHWS*SPSRDS Trigger: GCTGTCCCTTGATGGTGACAAACTCCAGTGGGCACT...CAATGGGAAGTGATGACTATTCCTGGTTCTGAAAGCAGAACTCTGTGAGTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR TCA 72 bp | TCCCCATTTAGCAGACACAGAGTCCCAAAGGTAGAGTaGCTGTCCAAATGCATTGGCAAAATATGGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPFSRHRVPKVE*LSKCIGKIWPS Trigger: ACTGGGCCATATTTTGCCAATGCATTTGGACAGTCACTCTACCTTTGGGACTCTGTGTCTGCTAAATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR TCA 72 bp | TTGGGTACTTTGGTTTTGGACCCTGGGACAAGGGATTaGGGTATGCATTTTACATATCAGAGCAGACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGTLVLDPGTRD*GMHFTYQSRPG Trigger: GCCAGGTCTGCTCTGATATGTAAAATGCATACCTCAATCCCTTGTCCCAGGGTCCAAAACCAAAGTACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR GCA 72 bp | CAGAGCCCAGAAGAACTAGGTGTGCCGGATGAGCTATaGAAGAGAGCGAGACATAGAAAAACAACAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: QSPEELGVPDEL*KRARHRKTTRT Trigger: TGTTCTTGTTGTTTTTCTATGTCTCGCTCTCTTGCATAGCTCATCCGGCACACCTAGTTCTTCTGGGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR TCA 72 bp | CATAGACACCTGAGAAGAAGGCAGAATTTCTTCTCTTaGCTGGCAGGTCTTGGGTTAGTTCTTGTCCCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HRHLRRRQNFFS*LAGLGLVLVPF Trigger: AAACGGGACAAGAACTAACCCAAGACCTGCCAGTCAAGAGAAGAAATTCTGCCTTCTTCTCAGGTGTCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR TCA 72 bp | AATGCTATCCCAAAAGTCACGCATTTCTATTTTACGTaGCCTTCCTTGCTAAGAACAGAGTTCAGATCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NAIPKVTHFYFT*PSLLRTEFRSR Trigger: CCTCGATCTGAACTCTGTTCTTAGCAAGGAAGGTCACGTAAAATAGAAATGCGTGACTTTTGGGATAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAATACTGCTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTTGCAGAATTTCTTCTCTaGACTGGCAGGTCTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SEYCLKFLLLALEITRLVAEFLL*TGRSWV Trigger: AACCCAAGACCTGCCAGTCAAGAGAAGAAATTCTGC...AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | CTTGAGAAATCAATTGTACTTTGGGTACTTTGGTTTTaGACCCTGGGACAAGGGATTGAGGTATGCATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LEKSIVLWVLWF*TLGQGIEVCIL Trigger: TAAAATGCATACCTCAATCCCTTGTCCCAGGGTCCAAAACCAAAGTACCCAAAGTACAATTGATTTCTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | CTTTGCATCTTATGGCTGGGATATAAAGGTTTAGAATaGGGAAATCATTTGGCCAAGACAAAGCCACTAATA | + |
|
Preference number: 3 (lower is better) Translates to: LCILWLGYKGLE*GNHLAKTKPLI Trigger: TATTAGTGGCTTTGTCTTGGCCAAATGATTTCCCCATTCTAAACCTTTATATCCCAGCCATAAGATGCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CCA 72 bp | GGTCTGTGGATGAGTTTGAACATTCTTTGCATCTTATaGCTGGGATATAAAGGTTTAGAATGGGGAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: GLWMSLNILCIL*LGYKGLEWGNH Trigger: ATGATTTCCCCATTCTAAACCTTTATATCCCAGCCATAAGATGCAAAGAATGTTCAAACTCATCCACAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCAGGCTAGCCTAGCCTCAGGACTCTCCAGGCACACCCTCCACAGTGCTGCAGCAGAGAGGTGCTaGTGTAGATCTGTCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VAQASLASGLSRHTLHSAAAERC*CRSVRA Trigger: TGCCCGGACAGATCTACATCAGCACCTCTCTGCTGC...AGCACTGTGGAGGGTGTGCCTGGAGAGTCCTGAGGCTAGGCTAGCCTGGGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR GCA 90 bp | GCCACATCTACTACTGTGTGCCTAGCACAGAAAAGCATGGCAGAAGTGAAGGTCAGCAGGGCCACCAGGTaGCAGCGGGCTGCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSTTVCLAQKSMAEVKVSRATR*QRAARC Trigger: GCAGCGGGCAGCCCGCTGGCACCTGGTGGCCCTGCT...GACCTTCACTTCTGCCATGCTTTTCTGTGCTAGGCACACAGTAGTAGATGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR GCA 90 bp | CTCACGCCACTTGGATCTGGGCTCATATCCTGGGTCAGTTCCTTGCCTGTTAAGCTGTGCTGTAGCAGCTaGTCCCGCAGGGTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTPLGSGLISWVSSLPVKLCCSS*SRRVPS Trigger: ACTGGGGACCCTGCGGGAGCAGCTGCTACAGCACAG...CTTAACAGGCAAGGAACTGACCCAGGATATGAGCCCAGATCCAAGTGGCGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CAA 72 bp | CCACTTGGATCTGGGCTCATATCCTGGGTCAGTTCCTaGCCTGTTAAGTCGTTGAGGGAGATGCTGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGSGLISWVSS*PVKSLREMLAP Trigger: AGGGGCCAGCATCTCCCTCAACGACTTAACAGGCAAGGAACTGACCCAGGATATGAGCCCAGATCCAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CAA 72 bp | TATCACCTGGCTCCTGCTGTGTATCCCATCCTGCCTTaGAACTCTCAAGCCTCCTGCTTCAGCTCAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YHLAPAVYPILP*NSQASCFSSGY Trigger: GTAGCCTGAGCTGAAGCAGGAGGCTTGAGAGTTCAAAGGCAGGATGGGATACACAGCAGGAGCCAGGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR CCA 90 bp | AGCCCAAGCCACATCTACTACTGTGTGCCTAGCACAGAAAAGCATGGCAGAAGTAGCAGTGACAGGCGCTaGGCTGAGGCAGTCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSHIYYCVPSTEKHGRSSSDRR*AEAVRS Trigger: ACTTCTGACTGCCTCAGCCCAGCGCCTGTCACTGCT...ACTTCTGCCATGCTTTTCTGTGCTAGGCACACAGTAGTAGATGTGGCTTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR TCA 90 bp | TCTGTCCAGTTACAATTGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTACAGGGGTGCGTGGGTaGGCAGCAGTGACAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVQLQLNNQVVSVWLLSVTGVRG*AAVTGA Trigger: AGCGCCTGTCACTGCTGCTCACCCACGCACCCCTGT...AACTGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR TCA 90 bp | TCAGAATACTGCTTGAAGTTTCTATTGCTTGCACTAGAAATAACACGTCTGGTTCATAGCCCACGGTGGTaGCAAGCGTGCTGGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEYCLKFLLLALEITRLVHSPRW*QACWRR Trigger: TCTTCGCCAGCACGCTTGTCACCACCGTGGGCTATG...AACCAGACGTGTTATTTCTAGTGCAAGCAATAGAAACTTCAAGCAGTATTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR TCA 90 bp | ATTATTATTATATTGCTTAGCTTATTTTATCACCTGGCTCCTGCTGTGTATCCCCATCCTCATCCTGGCTaGGGCTGGCAGGGTCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IIIILLSLFYHLAPAVYPHPHPG*GWQGPD Trigger: ATCCGGACCCTGCCAGCCTCAGCCAGGATGAGGATG...GGGATACACAGCAGGAGCCAGGTGATAAAATAAGCTAAGCAATATAATAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CAA 72 bp | TCAGTCTCTCCCCACCCGGGTTCTGTCCAGTTACAATaGAACAATCAGGTTGTTTCAGTCTGGCTTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSPHPGSVQLQ*NNQVVSVWLLS Trigger: TGACAAAAGCCAGACTGAAACAACCTGATTGTTCAATTGTAACTGGACAGAACCCGGGTGGGGAGAGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR TCA 90 bp | ATCTTATGGCTGGGATATAAAGGTTTAGAATGGGGAAATCATTTGGCCAAGACAGGAAGAGGTACGCTGTaGCAAGCACCTTGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILWLGYKGLEWGNHLAKTGRGTL*QAPCRG Trigger: CCCTCTACAAGGTGCTTGTCACAGCGTACCTCTTCC...TGTCTTGGCCAAATGATTTCCCCATTCTAAACCTTTATATCCCAGCCATAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR CCA 90 bp | ACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTGCAGTCAAAATCCTTAAGTGGAGTGCAAAGACGATaGAGAAGGCTTTGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIRLFQSGFCQLQSKSLSGVQRR*RRLCQH Trigger: ATGCTGGCAAAGCCTTCTCCATCGTCTTTGCACTCC...ACTTAAGGATTTTGACTGCAACTGACAAAAGCCAGACTGAAACAACCTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CAA 72 bp | TGGCTGGGATATAAAGGTTTAGAATGGGGAAATCATTaGGCCAAGACAAAGCCACTAATACAGAGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLGYKGLEWGNH*AKTKPLIQRLK Trigger: CTTTAGCCTCTGTATTAGTGGCTTTGTCTTGGCCAAATGATTTCCCCATTCTAAACCTTTATATCCCAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| 3UTR CAA 72 bp | GAAAAGCATGGCAGAAGTGAAGGTCTGTGGATGAGTTaGAACATTCTTTGCATCTTATGGCTGGGATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKHGRSEGLWMS*NILCILWLGYK Trigger: TTTATATCCCAGCCATAAGATGCAAAGAATGTTCAAACTCATCCACAGACCTTCACTTCTGCCATGCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS GCA 90 bp | CGCAGGGTCCGAAGCGTTGGCAGCTCCCGAGGCGTTGGCGAGCGCTaGGCGCCCCAGCCGTCCGGCCGCCAGCACCCGCTCCACGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRSVGSSRGVGER*APQPSGRQHPLHEG Trigger: GCCTTCGTGGAGCGGGTGCTGGCGGCCGGACGGCTGGGGCGCGCAGCGCTCGCCAACGCCTCGGGAGCTGCCAACGCTTCGGACCCTGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS TCA 90 bp | AGCTGCTCCCGCAGGGTCCCCAGTTCTGCCCGCAGCCGGGCTTCGTaGGGCCGCTCCAGCCGCGCCACAAGCAGCGCGCCCAGCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSRRVPSSARSRAS*GRSSRATSSAPSAR Trigger: CCTGGCGCTGGGCGCGCTGCTTGTGGCGCGGCTGGAGCGGCCTCACGAAGCCCGGCTGCGGGCAGAACTGGGGACCCTGCGGGAGCAGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS TCA 90 bp | AGCCGTCCGGCCGCCAGCACCCGCTCCACGAAGGCATCCAGGGCGTaGGCCGCCACGCACGGGCTGTGCTGTAGCAGCTGCTCCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRPAASTRSTKASRA*AATHGLCCSSCSRR Trigger: CCTGCGGGAGCAGCTGCTACAGCACAGCCCGTGCGTGGCGGCTCACGCCCTGGATGCCTTCGTGGAGCGGGTGCTGGCGGCCGGACGGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CCA 90 bp | CTCAGCCAGGACAGGGGTGCGTGGGTGAGCAGCAGTGACAGGCGCTaGGCTGAGGCAGTCAGAAGTAGCATGGTGATAGGCACGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQDRGAWVSSSDRR*AEAVRSSMVIGTPR Trigger: CCTGGGCGTGCCTATCACCATGCTACTTCTGACTGCCTCAGCCCAGCGCCTGTCACTGCTGCTCACCCACGCACCCCTGTCCTGGCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CCA 90 bp | CTGGCAGGGTCCGGATCGGGCAGCAAGATGAGTTCTGTGAGGCCATaGAGGTCGGAAACACGGCGGAAAGTCTGCAACACGAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LAGSGSGSKMSSVRP*RSETRRKVCNTSTM Trigger: CATGGTGCTCGTGTTGCAGACTTTCCGCCGTGTTTCCGACCTCCATGGCCTCACAGAACTCATCTTGCTGCCCGATCCGGACCCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS GCA 90 bp | ATGAGTTCTGTGAGGCCATGGAGGTCGGAAACACGGCGGAAAGTCTaGAACACGAGCACCATGGCAACCAGGCCGAGGAAGAGGTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSSVRPWRSETRRKV*NTSTMATRPRKRYA Trigger: AGCGTACCTCTTCCTCGGCCTGGTTGCCATGGTGCTCGTGTTGCAGACTTTCCGCCGTGTTTCCGACCTCCATGGCCTCACAGAACTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS-3UTR CAA 90 bp | ACAATCAGGTTGTTTCAGTCTGGCTTTTGTCAGTTGCAGTCAAAATCCTTAAGTACGATGGAGAAGGCTTaGCCAGCATCTGTCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TIRLFQSGFCQLQSKSLSTMEKA*PASVSG Trigger: CCCACTGACAGATGCTGGCAAAGCCTTCTCCATCGT...ACTTAAGGATTTTGACTGCAACTGACAAAAGCCAGACTGAAACAACCTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS GCA 72 bp | CGAAGCGTTGGCAGCTCCCGAGGCGTTGGCGAGCGCTaGGCGCCCCAGCCGTCCGGCCGCCAGCACCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSVGSSRGVGER*APQPSGRQHPL Trigger: GAGCGGGTGCTGGCGGCCGGACGGCTGGGGCGCGCAGCGCTCGCCAACGCCTCGGGAGCTGCCAACGCTTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CAA 72 bp | CACGCAGGGTCCGAAGCGTTGGCAGCTCCCGAGGCGTaGGCGAGCGCTGCGCGCCCCAGCCGTCCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HAGSEALAAPEA*ASAARPSRPAA Trigger: GGCGGCCGGACGGCTGGGGCGCGCAGCGCTCGCCAACGCCTCGGGAGCTGCCAACGCTTCGGACCCTGCGTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CCA 72 bp | ACGCAGGGTCCGAAGCGTTGGCAGCTCCCGAGGCGTTaGCGAGCGCTGCGCGCCCCAGCCGTCCGGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TQGPKRWQLPRR*RALRAPAVRPP Trigger: TGGCGGCCGGACGGCTGGGGCGCGCAGCGCTCGCCAACGCCTCGGGAGCTGCCAACGCTTCGGACCCTGCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CCA 72 bp | GCGCCGAGGCGAAGTCCCACGCAGGGTCCGAAGCGTTaGCAGCTCCCGAGGCGTTGGCGAGCGCTGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: APRRSPTQGPKR*QLPRRWRALRA Trigger: GGCGCGCAGCGCTCGCCAACGCCTCGGGAGCTGCCAACGCTTCGGACCCTGCGTGGGACTTCGCCTCGGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CAA 72 bp | AGCGCCGAGGCGAAGTCCCACGCAGGGTCCGAAGCGTaGGCAGCTCCCGAGGCGTTGGCGAGCGCTGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SAEAKSHAGSEA*AAPEALASAAR Trigger: GCGCGCAGCGCTCGCCAACGCCTCGGGAGCTGCCAACGCTTCGGACCCTGCGTGGGACTTCGCCTCGGCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS TCA 72 bp | GCCGCCAGCACCCGCTCCACGAAGGCATCCAGGGCGTaGGCCGCCACGCACGGGCTGTGCTGTAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AASTRSTKASRA*AATHGLCCSSC Trigger: GCAGCTGCTACAGCACAGCCCGTGCGTGGCGGCTCACGCCCTGGATGCCTTCGTGGAGCGGGTGCTGGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS GCA 72 bp | GTGAGGCCATGGAGGTCGGAAACACGGCGGAAAGTCTaGAACACGAGCACCATGGCAACCAGGCCGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VRPWRSETRRKV*NTSTMATRPRK Trigger: CTTCCTCGGCCTGGTTGCCATGGTGCTCGTGTTGCAGACTTTCCGCCGTGTTTCCGACCTCCATGGCCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||
| CDS CCA 72 bp | AAAGACGATGGAGAAGGCTTTGCCAGCATCTGTCAGTaGGGTCGTGTAGCCATAGCCCACGGTGGTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: KDDGEGFASICQ*GRVAIAHGGDK Trigger: CTTGTCACCACCGTGGGCTATGGCTACACGACCCCACTGACAGATGCTGGCAAAGCCTTCTCCATCGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085818.6 |
||