Pregenerated sensors for KCNK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023243Ensembl transcript IDs: ENSMUST00000024011.10
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTaGGCCAACACCACATCCCATGGAAGCAACCAAGTGGAGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: QDSSLPTGPQNGGLS*ANTTSHGSNQVERT Trigger: TGTCCTCTCCACTTGGTTGCTTCCATGGGATGTGGTGTTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 90 bp | TGGCCCCCACTAAGAGAGGAGGGAGAGGCAGTGAGAGAATCTCTCTaGAATGAGACGGTGGGCTGGGAGTATGGGTGCCTAGGCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: WPPLREEGEAVRESL*NETVGWEYGCLGWG Trigger: GCCCCAGCCTAGGCACCCATACTCCCAGCCCACCGTCTCATTTCAGAGAGATTCTCTCACTGCCTCTCCCTCCTCTCTTAGTGGGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 90 bp | CCCACTAAGAGAGGAGGGAGAGGCAGTGAGAGAATCTCTCTGAAATaGGACGGTGGGCTGGGAGTATGGGTGCCTAGGCTGGGGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PTKRGGRGSERISLK*DGGLGVWVPRLGLR Trigger: CCTCAGCCCCAGCCTAGGCACCCATACTCCCAGCCCACCGTCTCATTTCAGAGAGATTCTCTCACTGCCTCTCCCTCCTCTCTTAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 90 bp | GTCCCTGGCTCCCCATCTCATTTCCAGAGCCTTCTCCCTGGGGTCTaGCCATCACAGGACAATCCTCGTGAGAGGAAGCCACTGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: VPGSPSHFQSLLPGV*PSQDNPRERKPLES Trigger: GCTTTCCAGTGGCTTCCTCTCACGAGGATTGTCCTGTGATGGCCAGACCCCAGGGAGAAGGCTCTGGAAATGAGATGGGGAGCCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 90 bp | GAGGCCTGTCCTGGGCCAACACCACATCCCATGGAAGCAACCAAGTaGAGAGGACAGAAGGAAAGGCAGGTCCCTGGCTCCCCATCTCAT | + |
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Preference number: 1 (lower is better) Translates to: EACPGPTPHPMEATK*RGQKERQVPGSPSH Trigger: ATGAGATGGGGAGCCAGGGACCTGCCTTTCCTTCTGTCCTCTCCACTTGGTTGCTTCCATGGGATGTGGTGTTGGCCCAGGACAGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 90 bp | TGCTGGGCAGTGATGCCTACTTGGGCAAGCAGGTCCTGCTACTGCTaGGGTACTGAGAGGCCCCAAACCCCATCATATCTGTGCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CWAVMPTWASRSCYC*GTERPQTPSYLCFP Trigger: GGGAAAGCACAGATATGATGGGGTTTGGGGCCTCTCAGTACCCCAGCAGTAGCAGGACCTGCTTGCCCAAGTAGGCATCACTGCCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 90 bp | GAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATaGATACACACCTCTCACTGTCCTAACGTGTGGGGGCTCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: EAAVASTTALIMVEV*IHTSHCPNVWGLWP Trigger: GGGCCAGAGCCCCCACACGTTAGGACAGTGAGAGGTGTGTATCCATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 90 bp | CCCTTTGGCCTGCTGTTGTTGTTCAGAGGGAATCTGAGGTGGGCATaGCTCCACACAGAGGACACACATAGCTCTCCCCTACATCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PFGLLLLFRGNLRWA*LHTEDTHSSPLHPL Trigger: CAGGGGATGTAGGGGAGAGCTATGTGTGTCCTCTGTGTGGAGTCATGCCCACCTCAGATTCCCTCTGAACAACAACAGCAGGCCAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 90 bp | AAAATAAATTACATCTGCCTTCACCATCGGCACATGCACACAGCGTaGTTGGTGTGCCGCCAGGACATTCAGCTGAGGTCCTCTCACAGG | + |
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Preference number: 1 (lower is better) Translates to: KINYICLHHRHMHTA*LVCRQDIQLRSSHR Trigger: CCTGTGAGAGGACCTCAGCTGAATGTCCTGGCGGCACACCAACCACGCTGTGTGCATGTGCCGATGGTGAAGGCAGATGTAATTTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGGGAAAGGCAGGTCCCTaGCTCCCCATCTCATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMGKAGP*LPISFP Trigger: TGGAAATGAGATGGGGAGCCAGGGACCTGCCTTTCC...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTCGGTGGGCTGGGAGTATaGGTGCCTAGGCTGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TKDKLSWKDNRVPDRPPFGGLGV*VPRLGL Trigger: CAGCCCCAGCCTAGGCACCCATACTCCCAGCCCACC...GAATGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCGTGAGAGGAAGCCACTaGAAAGCAAGTGGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGVRGSH*KASGEP Trigger: TGGCTCCCCACTTGCTTTCCAGTGGCTTCCTCTCAC...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR TCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCAGGGCTTGCTGGGCAGTaGTGCCTACTTGGGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPGLAGQ*CLLGQA Trigger: TGCTTGCCCAAGTAGGCATCACTGCCCAGCAAGCCC...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGAGGAGGGAGAGGCAGTaGGAGAATCTCTCTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMRRERQ*ENLSEM Trigger: CATTTCAGAGAGATTCTCTCACTGCCTCTCCCTCCT...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTAGTTCCCAGACCTCGCTAGGAACTGGACCAGTAAGATTCACATTTTCTCAGCAGCCTCCCTACTaGGCCACAGAACGGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: AASSQTSLGTGPVRFTFSQQPPY*ATERRP Trigger: AGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTG...AGAAAATGTGAATCTTACTGGTCCAGTTCCTAGCGAGGTCTGGGAACTAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGGCATTTAGGCCAGAGTaGGCTGAGCATCAAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMAFRPE*AEHQGH Trigger: ATGTCCTTGATGCTCAGCCCACTCTGGCCTAAATGC...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTCAATCAGCAATACACCTaGCGGGCAGGCCCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TKDKLSWKDNRVPDRPPFNQQYT*RAGPGQ Trigger: CTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATT...GAATGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAGCCCAAATGTGCACACGCATGCCCATTGATTGGCAGTTACACATGCTAACAGGACAATCCTCGTaGGAGGAAGCCACTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SPAQMCTRMPIDWQLHMLTGQSS*EEATGK Trigger: CTTTCCAGTGGCTTCCTCTCACGAGGATTGTCCTGT...TAGCATGTGTAACTGCCAATCAATGGGCATGCGTGTGCACATTTGGGCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR TCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATGTTCAGAGGGAATCTaGGGTGGGCATGACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPCSEGI*GGHDST Trigger: TGTGGAGTCATGCCCACCTCAGATTCCCTCTGAACA...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCAATGGAAGCAACCAAGTaGAGAGGACAGAAGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPMEATK*RGQKER Trigger: CCTTTCCTTCTGTCCTCTCCACTTGGTTGCTTCCAT...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCAGACCTCGCTAGGAACTaGACCAGTAAGATTCACATT | + |
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Preference number: 2 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPDLARN*TSKIHI Trigger: AATGTGAATCTTACTGGTCCAGTTCCTAGCGAGGTC...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCACGCATGCCCATTGATTaGCAGTTACACATGCTAATA | + |
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Preference number: 2 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPRMPID*QLHMLI Trigger: TATTAGCATGTGTAACTGCCAATCAATGGGCATGCG...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR GCA 90 bp | AAAAATATTAATAACAAAAAGCATTTAGGCCAGAGTGGGCTGAGCATCAAGGACAGGGACCCTTTGGCCTaGTGTTGTTGTTCAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KNINNKKHLGQSGLSIKDRDPLA*CCCSEG Trigger: TCCCTCTGAACAACAACAGCAGGCCAAAGGGTCCCT...GTCCTTGATGCTCAGCCCACTCTGGCCTAAATGCTTTTTGTTATTAATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | ACCTGCCGGGCAGGCCCAGGACAGCAGCCTCCCTACTaGGCCACAGAACGGAGGCCTGTCCTGGGCCAACAC | + |
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Preference number: 3 (lower is better) Translates to: TCRAGPGQQPPY*ATERRPVLGQH Trigger: GTGTTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR GCA 72 bp | GTGTTGCGGCCTACGTGCCTGAATCAGCAATACACCTaGCGGGCAGGCCCAGGACAGCAGCCTCCCTACTGG | + |
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Preference number: 3 (lower is better) Translates to: VLRPTCLNQQYT*RAGPGQQPPYW Trigger: CCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATTCAGGCACGTAGGCCGCAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR GCA 72 bp | CTGAGGCAGGTTATCAGCTGCCCCTCACCCGAGACCTaGGCCTGCCCCTCCGTAGCTAGACCTTGGCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: LRQVISCPSPET*ACPSVARPWLD Trigger: GTCAAGCCAAGGTCTAGCTACGGAGGGGCAGGCGCAGGTCTCGGGTGAGGGGCAGCTGATAACCTGCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | AGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTaGGCCAACACCACATCCCATGGAAGCAACCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLPTGPQNGGLS*ANTTSHGSNQV Trigger: CACTTGGTTGCTTCCATGGGATGTGGTGTTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 72 bp | TCTCCCTGGGGTCTGGCCATCACAGGACAATCCTCGTaGGAGGAAGCCACTGGAAAGCAAGTGGGGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SPWGLAITGQSS*EEATGKQVGSQ Trigger: CTGGCTCCCCACTTGCTTTCCAGTGGCTTCCTCTCACGAGGATTGTCCTGTGATGGCCAGACCCCAGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR GCA 72 bp | CTTCACCATCGGCACATGCACACAGCGTGGTTGGTGTaGCGCCAGGACATTCAGCTGAGGTCCTCTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LHHRHMHTAWLV*RQDIQLRSSHR Trigger: CCTGTGAGAGGACCTCAGCTGAATGTCCTGGCGGCACACCAACCACGCTGTGTGCATGTGCCGATGGTGAAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGGGGCACAGGGACCCTTaGGCCTGCTGTTGTTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMGHRDP*ACCCCS Trigger: TGAACAACAACAGCAGGCCAAAGGGTCCCTGTGCCC...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 72 bp | TGCCCTGAGGTTTGCAGTAAGGGGCTTGCTGGGCAGTaGTGCCTACTTGGGCAAGCAGGTCCTGCTACTGCT | + |
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Preference number: 3 (lower is better) Translates to: CPEVCSKGLAGQ*CLLGQAGPATA Trigger: AGCAGTAGCAGGACCTGCTTGCCCAAGTAGGCATCACTGCCCAGCAAGCCCCTTACTGCAAACCTCAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | GAACGGAGGCCTGTCCTGGGCCAACACCACATCCCATaGAAGCAACCAAGTGGAGAGGACAGAAGGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: ERRPVLGQHHIP*KQPSGEDRRKG Trigger: GCCTTTCCTTCTGTCCTCTCCACTTGGTTGCTTCCATGGGATGTGGTGTTGGCCCAGGACAGGCCTCCGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | TCCCCATCTCATTTCCAGAGCCTTCTCCCTGGGGTCTaGCCATCACAGGACAATCCTCGTGAGAGGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SPSHFQSLLPGV*PSQDNPRERKP Trigger: TGGCTTCCTCTCACGAGGATTGTCCTGTGATGGCCAGACCCCAGGGAGAAGGCTCTGGAAATGAGATGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | ATACACACCTCTCACTGTCCTAACGTGTGGGGGCTCTaGCCCTATATGCCCCTCCGCAAATGCACACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: IHTSHCPNVWGL*PYMPLRKCTQQ Trigger: CTGCTGTGTGCATTTGCGGAGGGGCATATAGGGCCAGAGCCCCCACACGTTAGGACAGTGAGAGGTGTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTCGGCAGTGATGCCTACTaGGGCAAGCAGGTCCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: TKDKLSWKDNRVPDRPPFGSDAY*GKQVLL Trigger: TAGCAGGACCTGCTTGCCCAAGTAGGCATCACTGCC...GAATGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 72 bp | CTGCTGTTGTTGTTCAGAGGGAATCTGAGGTGGGCATaGCTCCACACAGAGGACACACATAGCTCTCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: LLLLFRGNLRWA*LHTEDTHSSPL Trigger: TAGGGGAGAGCTATGTGTGTCCTCTGTGTGGAGTCATGCCCACCTCAGATTCCCTCTGAACAACAACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR TCA 72 bp | GACCCTTTGGCCTGCTGTTGTTGTTCAGAGGGAATCTaGGGTGGGCATGACTCCACACAGAGGACACACATA | + |
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Preference number: 3 (lower is better) Translates to: DPLACCCCSEGI*GGHDSTQRTHI Trigger: TATGTGTGTCCTCTGTGTGGAGTCATGCCCACCTCAGATTCCCTCTGAACAACAACAGCAGGCCAAAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR-3UTR CAA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTTGCAGTAAGGGGCTaGCTGGGCAGTGATGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPFAVRG*LGSDAY Trigger: GTAGGCATCACTGCCCAGCAAGCCCCTTACTGCAAA...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | GGGCTCAATTCACAGTTCTATGAGCCAAGAACAATTTaGCCCCCACTAAGAGAGGAGGGAGAGGCAGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GLNSQFYEPRTI*PPLREEGEAVR Trigger: TCTCACTGCCTCTCCCTCCTCTCTTAGTGGGGGCCAAATTGTTCTTGGCTCATAGAACTGTGAATTGAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| 3UTR CCA 72 bp | TCCCCAGCCCAAATGTGCACACGCATGCCCATTGATTaGCAGTTACACATGCTAATACCATATAGTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SPAQMCTRMPID*QLHMLIPYSGW Trigger: CCAGCCACTATATGGTATTAGCATGTGTAACTGCCAATCAATGGGCATGCGTGTGCACATTTGGGCTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | GAATCAGCAATACACCTGCCGGGCAGGCCCAGGACAGCAGCCTCCCTACTGGGCGAAGAGGCGCCCAGCTaGGGTCTTGGGAGCCACATT | + |
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Preference number: 4 (lower is better) Translates to: ESAIHLPGRPRTAASLLGEEAPS*GLGSHI Trigger: AATGTGGCTCCCAAGACCCCAGCTGGGCGCCTCTTC...GCCCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | CCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGCCAACGTGGTAGTTGGCACTaGGGTTCACACCGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PGQQPPYWATERRPVLGQRGSWH*GSHRPQ Trigger: TTGTGGCCGGTGTGAACCCCAGTGCCAACTACCACG...TTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | CAGGCCCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGGCCTTCCGGGAGTGTaGAGAGCTCTCAAAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: QAQDSSLPTGPQNGGLSWGLPGV*RALKGF Trigger: GAATCCTTTGAGAGCTCTCCACACTCCCGGAAGGCC...CCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR GCA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGATCCTTGGGGGCCTGTaGCCCAGCCTCCTCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMILGGL*PSLLTK Trigger: CTTGGTGAGGAGGCTGGGGCACAGGCCCCCAAGGAT...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | CCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGCCAACAGTTGTTGAAAGTCTaGTTCCCGGTGATGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PGQQPPYWATERRPVLGQQLLKV*FPVMAT Trigger: TGTGGCCATCACCGGGAACCAGACTTTCAACAACTG...TTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | TCCACACAGAGGACACACATAGCTCTCCCCTACATCCCCTGCCCTGAGGTTTGCGGCGGGATCACCAGATaGACCAGGACACCCCACACG | + |
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Preference number: 4 (lower is better) Translates to: STQRTHIALPYIPCPEVCGGITR*TRTPHT Trigger: CGTGTGGGGTGTCCTGGTCCATCTGGTGATCCCGCC...GCAAACCTCAGGGCAGGGGATGTAGGGGAGAGCTATGTGTGTCCTCTGTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR TCA 90 bp | GAATCAGCAATACACCTGCCGGGCAGGCCCAGGACAGCAGCCTCCCTACTGGGCGGCACGGAAACTCCTTaGGTAGATGCAGTTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: ESAIHLPGRPRTAASLLGGTETP*VDAVSV Trigger: CACAGAAACTGCATCTACTCAAGGAGTTTCCGTGCC...GCCCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR TCA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGAGGCACGGAGAGCTCTaGCTCGGTGCTGGTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMRHGEL*LGAGEG Trigger: ACCTTCACCAGCACCGAGTCAGAGCTCTCCGTGCCT...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTCCCCGTGTCCAGGTCCTaGGACCCTCTCCCCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKDKLSWKDNRVPDRPPFPVSRS*DPLPSP Trigger: GGGGGAGGGGAGAGGGTCCCAGGACCTGGACACGGG...GAATGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR TCA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCAAGTCTGGTTCCCGGTaGTGGCCACACCCTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGKSGSR*WPHPDP Trigger: CGGATCAGGGTGTGGCCATCACCGGGAACCAGACTT...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR TCA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCACTTGCCCAGGGCACTaGTCCATGTCAGGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGTCPGH*SMSGTA Trigger: CGCTGTGCCTGACATGGATCAGTGCCCTGGGCAAGT...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | TCCACACAGAGGACACACATAGCTCTCCCCTACATCCCCTGCCCTGAGGTTTGCGGCCTCCTTCCAGTGTaGCTCCTCCAGCACTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: STQRTHIALPYIPCPEVCGLLPV*LLQHFE Trigger: TTCGAAGTGCTGGAGGAGCCACACTGGAAGGAGGCC...GCAAACCTCAGGGCAGGGGATGTAGGGGAGAGCTATGTGTGTCCTCTGTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | GAATCAGCAATACACCTGCCGGGCAGGCCCAGGACAGCAGCCTCCCTACTGGGCATACCTCTTCCAAGCTaGGCACCCGATTCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESAIHLPGRPRTAASLLGIPLPS*APDSWN Trigger: ATTCCAAGAATCGGGTGCCCAGCTTGGAAGAGGTAT...GCCCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| 3UTR CAA 72 bp | ATCTGCCTTCACCATCGGCACATGCACACAGCGTGGTaGGTGTGCCGCCAGGACATTCAGCTGAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICLHHRHMHTAW*VCRQDIQLRSS Trigger: AGAGGACCTCAGCTGAATGTCCTGGCGGCACACCAACCACGCTGTGTGCATGTGCCGATGGTGAAGGCAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR TCA 90 bp | GCTGTTGTTGTTCAGAGGGAATCTGAGGTGGGCATGACTCCACACAGAGGACACGTGATGGCCACACCCTaGTCCGCAGCATCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: AVVVQRESEVGMTPHRGHVMATP*SAASDT Trigger: GGTGTCTGATGCTGCGGATCAGGGTGTGGCCATCAC...GTGTCCTCTGTGTGGAGTCATGCCCACCTCAGATTCCCTCTGAACAACAACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CCA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGCTCCTGGTAAGAAACTaGCCCAACCTCTTTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMLLVRN*PNLFAR Trigger: ACGTGCAAAGAGGTTGGGCCAGTTTCTTACCAGGAG...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR GCA 90 bp | GCAGTAAGGGGCTTGCTGGGCAGTGATGCCTACTTGGGCAAGCAGGTCCTGCTAGGCAGCAAAAATCATTaGATTGGGCCAGTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVRGLLGSDAYLGKQVLLGSKNH*IGPVPV Trigger: AACTGGAACTGGCCCAATGCAATGATTTTTGCTGCC...TAGCAGGACCTGCTTGCCCAAGTAGGCATCACTGCCCAGCAAGCCCCTTACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCAGCCCAGCTGGGGTCTTaGGAGCCACATTGCCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPAQLGS*EPHCHN Trigger: GTTATGGCAATGTGGCTCCCAAGACCCCAGCTGGGC...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCAATAGGGCGTGGTAGTTaGCACTGGGGTTCACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPIGRGS*HWGSHR Trigger: CCGGTGTGAACCCCAGTGCCAACTACCACGCCCTAT...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR TCA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCATTCTTCTGTCACCATaGACACAAAGGGCGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGILLSP*TQRAGS Trigger: TGATCCCGCCCTTTGTGTTCATGGTGACAGAAGAAT...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR GCA 90 bp | TTGACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCACACTTCGAAGATCGCTaGCCCGATGGCCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTKDKLSWKDNRVPDRPPHFEDR*PDGQVE Trigger: TTCTACCTGGCCATCGGGGCAGCGATCTTCGAAGTG...TGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGCCCAAATGTGCACACGCATGCCCATTGATTGGCAGTTACACATGCTAATAGACCACCAAAGGTaGCAGGGATGCAGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPAQMCTRMPIDWQLHMLIDHQR*QGCRDG Trigger: ACCATCCCTGCATCCCTGGCACCTTTGGTGGTCTAT...TAGCATGTGTAACTGCCAATCAATGGGCATGCGTGTGCACATTTGGGCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR GCA 90 bp | ACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTCAAGGGAATTCACCCGTaGTGCTCAAGGGTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKDKLSWKDNRVPDRPPFKGIHP*CSRVPQ Trigger: CTGAGGCACCCTTGAGCAGCACGGGTGAATTCCCTT...GAATGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CCA 90 bp | TCCACACAGAGGACACACATAGCTCTCCCCTACATCCCCTGCCCTGAGGTTTGCTATAGTAGTTTTTCTTaGCCTCCTTCCAGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STQRTHIALPYIPCPEVCYSSFS*PPSSVA Trigger: AGCCACACTGGAAGGAGGCCAAGAAAAACTACTATA...GCAAACCTCAGGGCAGGGGATGTAGGGGAGAGCTATGTGTGTCCTCTGTGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CCA 90 bp | GCAGCTAGTTCCCAGACCTCGCTAGGAACTGGACCAGTAAGATTCACATTTTCTTTTGGTAACTATCCTTaGGGGCCTGTGCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AASSQTSLGTGPVRFTFSFGNYP*GPVPQP Trigger: AGGCTGGGGCACAGGCCCCCAAGGATAGTTACCAAA...AGAAAATGTGAATCTTACTGGTCCAGTTCCTAGCGAGGTCTGGGAACTAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR TCA 90 bp | AAAAATATTAATAACAAAAAGCATTTAGGCCAGAGTGGGCTGAGCATCAAGGACTTCAGGCTGCTCCTTTaGGGTCAGGTTGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNINNKKHLGQSGLSIKDFRLLL*GQVVLH Trigger: GTGGAGGACAACCTGACCTCAAAGGAGCAGCCTGAA...GTCCTTGATGCTCAGCCCACTCTGGCCTAAATGCTTTTTGTTATTAATATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CCA 90 bp | AAAAATATTAATAACAAAAAGCATTTAGGCCAGAGTGGGCTGAGCATCAAGGACGGGATGCAGGGATGGTaGGTAGTCTATCCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNINNKKHLGQSGLSIKDGMQGW*VVYPLE Trigger: CTCAAGGGGATAGACTACCCACCATCCCTGCATCCC...GTCCTTGATGCTCAGCCCACTCTGGCCTAAATGCTTTTTGTTATTAATATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS TCA 90 bp | ACCAAAGGTGCCAGGGATGCAGGGATGGTGGGTAGTCTATCCCCTTaGGGTCCCAGCCCGTGTCCAGGTCCTGGGACCCTCTCCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TKGARDAGMVGSLSP*GPSPCPGPGTLSPP Trigger: GGGAGGGGAGAGGGTCCCAGGACCTGGACACGGGCTGGGACCTCAAGGGGATAGACTACCCACCATCCCTGCATCCCTGGCACCTTTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS TCA 90 bp | GGCCCAACCTCTTTGCACGTCCCCCGAAGAACTTGCCCAGGGCACTaGTCCATGTCAGGCACAGCGGCACCCCGAAGAGGCCGTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPTSLHVPRRTCPGH*SMSGTAAPRRGRRR Trigger: TCTTCTACGGCCTCTTCGGGGTGCCGCTGTGCCTGACATGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCAAAGAGGTTGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | CCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGCCAAGGCCAGTTCCAGTTGTaGAAAGTCTGGTTCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGQQPPYWATERRPVLGQGQFQL*KVWFPV Trigger: CACCGGGAACCAGACTTTCAACAACTGGAACTGGCC...TTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | GAATCAGCAATACACCTGCCGGGCAGGCCCAGGACAGCAGCCTCCCTACTGGGCACTGGCCCAACCTCTTaGCACGTCCCCCGAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ESAIHLPGRPRTAASLLGTGPTS*HVPRRT Trigger: AGTTCTTCGGGGGACGTGCAAAGAGGTTGGGCCAGT...GCCCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 90 bp | CGGATGAAGGGAATTCACCCGTGCTGCTCAAGGGTGCCTCAGCCATaGGTCCCTGTTCAGGCTGCTCCTTTGAGGTCAGGTTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMKGIHPCCSRVPQP*VPVQAAPLRSGCPP Trigger: TGGAGGACAACCTGACCTCAAAGGAGCAGCCTGAACAGGGACCCATGGCTGAGGCACCCTTGAGCAGCACGGGTGAATTCCCTTCATCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | CCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGCCAAAGGCACGGAAACTCCTaGAGTAGATGCAGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGQQPPYWATERRPVLGQRHGNS*SRCSFC Trigger: ACAGAAACTGCATCTACTCAAGGAGTTTCCGTGCCT...TTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | TCCACACAGAGGACACACATAGCTCTCCCCTACATCCCCTGCCCTGAGGTTTGCCTCTCAAAGGATTCCTaGCGCCGCCGCCGCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STQRTHIALPYIPCPEVCLSKDS*RRRRLF Trigger: AAAGAGGCGGCGGCGGCGCAAGGAATCCTTTGAGAG...GCAAACCTCAGGGCAGGGGATGTAGGGGAGAGCTATGTGTGTCCTCTGTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | CCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGCCAAAAACACTTCAGAGGTTaGGTAACTATCCTTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGQQPPYWATERRPVLGQKHFRG*VTILGG Trigger: GCCCCCAAGGATAGTTACCAAACCTCTGAAGTGTTT...TTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | CCAGGACAGCAGCCTCCCTACTGGGCCACAGAACGGAGGCCTGTCCTGGGCCAAGGGTTATCTGCCTTGTaGTATTCGTTCATCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGQQPPYWATERRPVLGQGLSAL*YSFISC Trigger: GCAGCTGATGAACGAATACAACAAGGCAGATAACCC...TTGGCCCAGGACAGGCCTCCGTTCTGTGGCCCAGTAGGGAGGCTGCTGTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS GCA 90 bp | CCTCAGGCTCACTCCTCTCCTGGTAAGAAACTGGCCCAACCTCTTTaGACGTCCCCCGAAGAACTTGCCCAGGGCACTGATCCATGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQAHSSPGKKLAQPL*TSPEELAQGTDPCQ Trigger: CTGACATGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCAAAGAGGTTGGGCCAGTTTCTTACCAGGAGAGGAGTGAGCCTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 90 bp | GATTCTTGGAATAGACCACCAAAGGTGCCAGGGATGCAGGGATGGTaGGTAGTCTATCCCCTTGAGGTCCCAGCCCGTGTCCAGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSWNRPPKVPGMQGW*VVYPLEVPARVQVL Trigger: CAGGACCTGGACACGGGCTGGGACCTCAAGGGGATAGACTACCCACCATCCCTGCATCCCTGGCACCTTTGGTGGTCTATTCCAAGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 90 bp | TGGACCAGGACACCCCACACGATGAAGATGGCTGTACACGTGATCTaGGCCTTCCTCAGGCTCACTCCTCTCCTGGTAAGAAACTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WTRTPHTMKMAVHVI*AFLRLTPLLVRNWP Trigger: GGGCCAGTTTCTTACCAGGAGAGGAGTGAGCCTGAGGAAGGCTCAGATCACGTGTACAGCCATCTTCATCGTGTGGGGTGTCCTGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 90 bp | TCATCAGCTGCTCGTAAGGCACGGAGAGCTCTGACTCGGTGCTGGTaGAGGTGGACTCATCGGATGAAGGGAATTCACCCGTGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAARKARRALTRCW*RWTHRMKGIHPCCS Trigger: TGAGCAGCACGGGTGAATTCCCTTCATCCGATGAGTCCACCTTCACCAGCACCGAGTCAGAGCTCTCCGTGCCTTACGAGCAGCTGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 90 bp | CAGTTCCAGTTGTTGAAAGTCTGGTTCCCGGTGATGGCCACACCCTaGTCCGCAGCATCAGACACCACCTGTAGGATCTTGTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFQLLKVWFPVMATP*SAASDTTCRILSSP Trigger: GGGACTGGACAAGATCCTACAGGTGGTGTCTGATGCTGCGGATCAGGGTGTGGCCATCACCGGGAACCAGACTTTCAACAACTGGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | GCAGTAAGGGGCTTGCTGGGCAGTGATGCCTACTTGGGCAAGCAGGTCCTGCTAATGCTCACCTTCCAGTaGACAAAGAGGGACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AVRGLLGSDAYLGKQVLLMLTFQ*TKRDSQ Trigger: TTGGCTGTCCCTCTTTGTCAACTGGAAGGTGAGCAT...TAGCAGGACCTGCTTGCCCAAGTAGGCATCACTGCCCAGCAAGCCCCTTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | GAATCAGCAATACACCTGCCGGGCAGGCCCAGGACAGCAGCCTCCCTACTGGGCACTGATACGGTCCAGTaGGTTAATAAACACTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESAIHLPGRPRTAASLLGTDTVQ*VNKHFR Trigger: TCTGAAGTGTTTATTAACCAACTGGACCGTATCAGT...GCCCAGTAGGGAGGCTGCTGTCCTGGGCCTGCCCGGCAGGTGTATTGCTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCAAGATGTTGACGTCCTaGGATGCTGTACTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGKMLTS*DAVLPA Trigger: GGCTGGAAGTACAGCATCCAAGGACGTCAACATCTT...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CAA 90 bp | CCCCACCGAGGCTGCTGTGGCCTCTACAACCGCTTTGATAATGGTGGAGGTATGTCCTTTGAGGTCAGGTaGTCCTCCACAGAAGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: PHRGCCGLYNRFDNGGGMSFEVR*SSTEDL Trigger: TAAGTCTTCTGTGGAGGACAACCTGACCTCAAAGGA...CATACCTCCACCATTATCAAAGCGGTTGTAGAGGCCACAGCAGCCTCGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS TCA 90 bp | TCCGCAGCATCAGACACCACCTGTAGGATCTTGTCCAGTCCCTCCTaGCTCAGGCACGGAAACTCCTTGAGTAGATGCAGTTTCTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SAASDTTCRILSSPS*LRHGNSLSRCSFCV Trigger: TACACAGAAACTGCATCTACTCAAGGAGTTTCCGTGCCTGAGTCAGGAGGGACTGGACAAGATCCTACAGGTGGTGTCTGATGCTGCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS CCA 90 bp | ATGCAGTTTCTGTGTATAGTAGTTTTTCTTGGCCTCCTTCCAGTGTaGCTCCTCCAGCACTTCGAAGATCGCTGCCCCGATGGCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MQFLCIVVFLGLLPV*LLQHFEDRCPDGQV Trigger: TACCTGGCCATCGGGGCAGCGATCTTCGAAGTGCTGGAGGAGCCACACTGGAAGGAGGCCAAGAAAAACTACTATACACAGAAACTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS CCA 90 bp | TTCCATTCTTCTGTCACCATGAACACAAAGGGCGGGATCACCAGATaGACCAGGACACCCCACACGATGAAGATGGCTGTACACGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: FHSSVTMNTKGGITR*TRTPHTMKMAVHVI Trigger: GATCACGTGTACAGCCATCTTCATCGTGTGGGGTGTCCTGGTCCATCTGGTGATCCCGCCCTTTGTGTTCATGGTGACAGAAGAATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCTGGCAGCAAAAATCATaGCATTGGGCCAGTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGWQQKS*HWASSS Trigger: ACTGGAACTGGCCCAATGCAATGATTTTTGCTGCCA...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS TCA 90 bp | AGGAATAGTAGAGGCCCTCAATGTAGTTCCATTCTTCTGTCACCATaGACACAAAGGGCGGGATCACCAGATGGACCAGGACACCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RNSRGPQCSSILLSP*TQRAGSPDGPGHPT Trigger: TGTGGGGTGTCCTGGTCCATCTGGTGATCCCGCCCTTTGTGTTCATGGTGACAGAAGAATGGAACTACATTGAGGGCCTCTACTATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCTAGTTCCCAGACCTCGCTAGGAACTGGACCAGTAAGATTCACATTTTCTTTGGGCCAGTTCCAGTaGTTGAAAGTCTGGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AASSQTSLGTGPVRFTFSLGQFQ*LKVWFP Trigger: CGGGAACCAGACTTTCAACAACTGGAACTGGCCCAA...AGAAAATGTGAATCTTACTGGTCCAGTTCCTAGCGAGGTCTGGGAACTAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGCCCAAATGTGCACACGCATGCCCATTGATTGGCAGTTACACATGCTAGCAAAAATCATTGCATaGGGCCAGTTCCAGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPAQMCTRMPIDWQLHMLAKIIA*GQFQLL Trigger: CAACAACTGGAACTGGCCCAATGCAATGATTTTTGC...TAGCATGTGTAACTGCCAATCAATGGGCATGCGTGTGCACATTTGGGCTGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGACAAGCTGAGTTGGAAGGACAACAGAGTGCCTGACAGACCTCCATTCGGTAATGTTGGCATTTaGGAAGATGAGCGGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TKDKLSWKDNRVPDRPPFGNVGI*EDERVV Trigger: TACCACCCGCTCATCTTCCAAAATGCCAACATTACC...GAATGGAGGTCTGTCAGGCACTCTGTTGTCCTTCCAACTCAGCTTGTCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
||
| CDS TCA 90 bp | GTAGGATCTTGTCCAGTCCCTCCTGACTCAGGCACGGAAACTCCTTaGGTAGATGCAGTTTCTGTGTATAGTAGTTTTTCTTGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VGSCPVPPDSGTETP*VDAVSVYSSFSWPP Trigger: AGGAGGCCAAGAAAAACTACTATACACAGAAACTGCATCTACTCAAGGAGTTTCCGTGCCTGAGTCAGGAGGGACTGGACAAGATCCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS GCA 90 bp | ATTGCCATAACCGATGGTGGTGATGACTGTGGCAGCAAAAATCATTaGATTGGGCCAGTTCCAGTTGTTGAAAGTCTGGTTCCCGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: IAITDGGDDCGSKNH*IGPVPVVESLVPGD Trigger: ATCACCGGGAACCAGACTTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCTGCCACAGTCATCACCACCATCGGTTATGGCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | AAGGCACAAGGGCGTTGCCCATTAACACTGGTGAACTCAGCTGAAGCTCCTGGCTTTTCAAAGGTAATGTaGGCATTTTGGAAGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: KAQGRCPLTLVNSAEAPGFSKVM*AFWKMS Trigger: GCTCATCTTCCAAAATGCCAACATTACCTTTGAAAA...GCCAGGAGCTTCAGCTGAGTTCACCAGTGTTAATGGGCAACGCCCTTGTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | AAAAATATTAATAACAAAAAGCATTTAGGCCAGAGTGGGCTGAGCATCAAGGACCGTCCCCCGAAGAACTaGCCCAGGGCACTGATCCAT | + |
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Preference number: 5 (lower is better) Translates to: KNINNKKHLGQSGLSIKDRPPKN*PRALIH Trigger: ATGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACG...GTCCTTGATGCTCAGCCCACTCTGGCCTAAATGCTTTTTGTTATTAATATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS-3UTR CAA 90 bp | GCAGCTAGTTCCCAGACCTCGCTAGGAACTGGACCAGTAAGATTCACATTTTCTCTCTTTTTAATGGCTTaGTGTACTTCCACAAACATG | + |
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Preference number: 5 (lower is better) Translates to: AASSQTSLGTGPVRFTFSLFLMA*CTSTNM Trigger: CATGTTTGTGGAAGTACACAAAGCCATTAAAAAGAG...AGAAAATGTGAATCTTACTGGTCCAGTTCCTAGCGAGGTCTGGGAACTAGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 72 bp | TCTTTGCACGTCCCCCGAAGAACTTGCCCAGGGCACTaGTCCATGTCAGGCACAGCGGCACCCCGAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLHVPRRTCPGH*SMSGTAAPRRG Trigger: GCCTCTTCGGGGTGCCGCTGTGCCTGACATGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCAAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 72 bp | AACTGGCCCAACCTCTTTGCACGTCCCCCGAAGAACTaGCCCAGGGCACTGATCCATGTCAGGCACAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: NWPNLFARPPKN*PRALIHVRHSG Trigger: GCCGCTGTGCCTGACATGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCAAAGAGGTTGGGCCAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 90 bp | CTGGTAAGAAACTGGCCCAACCTCTTTGCACGTCCCCCGAAGAACTaGCCCAGGGCACTGATCCATGTCAGGCACAGCGGCACCCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVRNWPNLFARPPKN*PRALIHVRHSGTPK Trigger: CTTCGGGGTGCCGCTGTGCCTGACATGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCAAAGAGGTTGGGCCAGTTTCTTACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 72 bp | GCTCGTAAGGCACGGAGAGCTCTGACTCGGTGCTGGTaGAGGTGGACTCATCGGATGAAGGGAATTCACCCG | + |
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Preference number: 6 (lower is better) Translates to: ARKARRALTRCW*RWTHRMKGIHP Trigger: CGGGTGAATTCCCTTCATCCGATGAGTCCACCTTCACCAGCACCGAGTCAGAGCTCTCCGTGCCTTACGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS GCA 72 bp | CTTCCAGTGTGGCTCCTCCAGCACTTCGAAGATCGCTaGCCCGATGGCCAGGTAGAATATGATGGCCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPVWLLQHFEDR*PDGQVEYDGRG Trigger: ACCTCGGCCATCATATTCTACCTGGCCATCGGGGCAGCGATCTTCGAAGTGCTGGAGGAGCCACACTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS GCA 72 bp | AGGTGGACTCATCGGATGAAGGGAATTCACCCGTGCTaGTCAAGGGTGCCTCAGCCATGGGTCCCTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RWTHRMKGIHPC*SRVPQPWVPVQ Trigger: CTGAACAGGGACCCATGGCTGAGGCACCCTTGAGCAGCACGGGTGAATTCCCTTCATCCGATGAGTCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 72 bp | AATAGACCACCAAAGGTGCCAGGGATGCAGGGATGGTaGGTAGTCTATCCCCTTGAGGTCCCAGCCCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NRPPKVPGMQGW*VVYPLEVPARV Trigger: GACACGGGCTGGGACCTCAAGGGGATAGACTACCCACCATCCCTGCATCCCTGGCACCTTTGGTGGTCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 72 bp | TGGAATAGACCACCAAAGGTGCCAGGGATGCAGGGATaGTGGGTAGTCTATCCCCTTGAGGTCCCAGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: WNRPPKVPGMQG*WVVYPLEVPAR Trigger: ACGGGCTGGGACCTCAAGGGGATAGACTACCCACCATCCCTGCATCCCTGGCACCTTTGGTGGTCTATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS GCA 72 bp | CACTCCTCTCCTGGTAAGAAACTGGCCCAACCTCTTTaGACGTCCCCCGAAGAACTTGCCCAGGGCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: HSSPGKKLAQPL*TSPEELAQGTD Trigger: ATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCAAAGAGGTTGGGCCAGTTTCTTACCAGGAGAGGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 72 bp | GCCTTCCGGGAGTGTGGAGAGCTCTCAAAGGATTCCTaGCGCCGCCGCCGCCTCTTTTTAATGGCTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: AFRECGELSKDS*RRRRLFLMALC Trigger: ACACAAAGCCATTAAAAAGAGGCGGCGGCGGCGCAAGGAATCCTTTGAGAGCTCTCCACACTCCCGGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 90 bp | ATCTGTAGGGCCTTCCGGGAGTGTGGAGAGCTCTCAAAGGATTCCTaGCGCCGCCGCCGCCTCTTTTTAATGGCTTTGTGTACTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: ICRAFRECGELSKDS*RRRRLFLMALCTST Trigger: TGTGGAAGTACACAAAGCCATTAAAAAGAGGCGGCGGCGGCGCAAGGAATCCTTTGAGAGCTCTCCACACTCCCGGAAGGCCCTACAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 72 bp | TTGTTGAAAGTCTGGTTCCCGGTGATGGCCACACCCTaGTCCGCAGCATCAGACACCACCTGTAGGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLKVWFPVMATP*SAASDTTCRIL Trigger: CAAGATCCTACAGGTGGTGTCTGATGCTGCGGATCAGGGTGTGGCCATCACCGGGAACCAGACTTTCAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 72 bp | ACACCCCACACGATGAAGATGGCTGTACACGTGATCTaGGCCTTCCTCAGGCTCACTCCTCTCCTGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: TPHTMKMAVHVI*AFLRLTPLLVR Trigger: TCTTACCAGGAGAGGAGTGAGCCTGAGGAAGGCTCAGATCACGTGTACAGCCATCTTCATCGTGTGGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 72 bp | TCTGTCACCATGAACACAAAGGGCGGGATCACCAGATaGACCAGGACACCCCACACGATGAAGATGGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SVTMNTKGGITR*TRTPHTMKMAV Trigger: TACAGCCATCTTCATCGTGTGGGGTGTCCTGGTCCATCTGGTGATCCCGCCCTTTGTGTTCATGGTGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 72 bp | AAAGCTCCACAAAGTATCGGTATAGGGCGTGGTAGTTaGCACTGGGGTTCACACCGGCCACAAAGTCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: KAPQSIGIGRGS*HWGSHRPQSPQ Trigger: TTGGGGACTTTGTGGCCGGTGTGAACCCCAGTGCCAACTACCACGCCCTATACCGATACTTTGTGGAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 72 bp | TCTGAGATACCTCTTCCAAGCTGGGCACCCGATTCTTaGAATAGACCACCAAAGGTGCCAGGGATGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SEIPLPSWAPDS*NRPPKVPGMQG Trigger: TCCCTGCATCCCTGGCACCTTTGGTGGTCTATTCCAAGAATCGGGTGCCCAGCTTGGAAGAGGTATCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 90 bp | GTCCAGGGCTTCCCACGGCTCTCCCTCCTCACTGATACGGTCCAGTaGGTTAATAAACACTTCAGAGGTTTGGTAACTATCCTTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VQGFPRLSLLTDTVQ*VNKHFRGLVTILGG Trigger: GCCCCCAAGGATAGTTACCAAACCTCTGAAGTGTTTATTAACCAACTGGACCGTATCAGTGAGGAGGGAGAGCCGTGGGAAGCCCTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 72 bp | TCAGACACCACCTGTAGGATCTTGTCCAGTCCCTCCTaGCTCAGGCACGGAAACTCCTTGAGTAGATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SDTTCRILSSPS*LRHGNSLSRCS Trigger: ACTGCATCTACTCAAGGAGTTTCCGTGCCTGAGTCAGGAGGGACTGGACAAGATCCTACAGGTGGTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CCA 72 bp | CTGTGTATAGTAGTTTTTCTTGGCCTCCTTCCAGTGTaGCTCCTCCAGCACTTCGAAGATCGCTGCCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: LCIVVFLGLLPV*LLQHFEDRCPD Trigger: ATCGGGGCAGCGATCTTCGAAGTGCTGGAGGAGCCACACTGGAAGGAGGCCAAGAAAAACTACTATACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 90 bp | CTCCTCACTGATACGGTCCAGTTGGTTAATAAACACTTCAGAGGTTaGGTAACTATCCTTGGGGGCCTGTGCCCCAGCCTCCTCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: LLTDTVQLVNKHFRG*VTILGGLCPSLLTK Trigger: CTTGGTGAGGAGGCTGGGGCACAGGCCCCCAAGGATAGTTACCAAACCTCTGAAGTGTTTATTAACCAACTGGACCGTATCAGTGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS TCA 72 bp | AGAGGCCCTCAATGTAGTTCCATTCTTCTGTCACCATaGACACAAAGGGCGGGATCACCAGATGGACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RGPQCSSILLSP*TQRAGSPDGPG Trigger: TCCTGGTCCATCTGGTGATCCCGCCCTTTGTGTTCATGGTGACAGAAGAATGGAACTACATTGAGGGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 72 bp | GATTCCTTGCGCCGCCGCCGCCTCTTTTTAATGGCTTaGTGTACTTCCACAAACATGCTCACCTTCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: DSLRRRRLFLMA*CTSTNMLTFQL Trigger: CAACTGGAAGGTGAGCATGTTTGTGGAAGTACACAAAGCCATTAAAAAGAGGCGGCGGCGGCGCAAGGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 72 bp | GATACGGTCCAGTTGGTTAATAAACACTTCAGAGGTTaGGTAACTATCCTTGGGGGCCTGTGCCCCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DTVQLVNKHFRG*VTILGGLCPSL Trigger: GAGGCTGGGGCACAGGCCCCCAAGGATAGTTACCAAACCTCTGAAGTGTTTATTAACCAACTGGACCGTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 90 bp | CTCTCAAAGGATTCCTTGCGCCGCCGCCGCCTCTTTTTAATGGCTTaGTGTACTTCCACAAACATGCTCACCTTCCAGTTGACAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSKDSLRRRRLFLMA*CTSTNMLTFQLTKR Trigger: CCTCTTTGTCAACTGGAAGGTGAGCATGTTTGTGGAAGTACACAAAGCCATTAAAAAGAGGCGGCGGCGGCGCAAGGAATCCTTTGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 72 bp | ATGGTGGTGATGACTGTGGCAGCAAAAATCATTGCATaGGGCCAGTTCCAGTTGTTGAAAGTCTGGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: MVVMTVAAKIIA*GQFQLLKVWFP Trigger: CGGGAACCAGACTTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCTGCCACAGTCATCACCACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS CAA 72 bp | TCCTTTTTGGATAGGAAGCTGAAGATGTTGACGTCCTaGGATGCTGTACTTCCAGCCATCTGTAGGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SFLDRKLKMLTS*DAVLPAICRAF Trigger: GAAGGCCCTACAGATGGCTGGAAGTACAGCATCCAAGGACGTCAACATCTTCAGCTTCCTATCCAAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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| CDS GCA 72 bp | ACCGATGGTGGTGATGACTGTGGCAGCAAAAATCATTaGATTGGGCCAGTTCCAGTTGTTGAAAGTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TDGGDDCGSKNH*IGPVPVVESLV Trigger: AACCAGACTTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCTGCCACAGTCATCACCACCATCGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024011.10 |
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