Pregenerated sensors for KCNK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024957Ensembl transcript IDs: ENSMUST00000025908.8, ENSMUST00000235248.2, ENSMUST00000235279.2, ENSMUST00000236443.2, ENSMUST00000237484.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCGGTGCCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTaGCGGCGGGGCGCTGGGCCCAGTTCGCTGGGTCACTCGCGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RRCRQRGGQEWLLLL*RRGAGPSSLGHSRC Trigger: ACAGCGCGAGTGACCCAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR GCA 90 bp | TGCAGGGGAGCCGGGCCTGCCGGCTGGCTCAACAACAGCAGGCGGTaGCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTGGCGG | + |
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Preference number: 1 (lower is better) Translates to: CRGAGPAGWLNNSRR*RQRGGQEWLLLLWR Trigger: CCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCTGCTGTTGTTGAGCCAGCCGGCAGGCCCGGCTCCCCTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CCA 90 bp | AAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTGGCGGCGGGGCGCTaGGCCCAGTTCGCTGGGTCACTCGCGCTGTCACTGTGCCGGTCC | + |
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Preference number: 1 (lower is better) Translates to: KRRAGVVAPSLAAGR*AQFAGSLALSLCRS Trigger: GGACCGGCACAGTGACAGCGCGAGTGACCCAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CCA 90 bp | AGTGGTTGCTCCTTCTCTGGCGGCGGGGCGCTGGGCCCAGTTCGCTaGGTCACTCGCGCTGTCACTGTGCCGGTCCAGCTAGCAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: SGCSFSGGGALGPVR*VTRAVTVPVQLAAC Trigger: ACAGGCTGCTAGCTGGACCGGCACAGTGACAGCGCGAGTGACCCAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CCA 90 bp | TGGCTCAACAACAGCAGGCGGTGCCGGCAAAGAGGAGGGCAGGAGTaGTTGCTCCTTCTCTGGCGGCGGGGCGCTGGGCCCAGTTCGCTG | + |
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Preference number: 1 (lower is better) Translates to: WLNNSRRCRQRGGQE*LLLLWRRGAGPSSL Trigger: CAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCTGCTGTTGTTGAGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR GCA 90 bp | CGGCGACCCCGAGGAGCCCGAGGCAGGGCACAGCCACGCTCACTCTaGGTGTCTGAGGACTCGTCGATGAAGGCCAGATTCTCACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: RRPRGARGRAQPRSL*VSEDSSMKARFSLG Trigger: CCCCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCTGTGCCCTGCCTCGGGCTCCTCGGGGTCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237484.2 |
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| 3UTR GCA 90 bp | CAGACTTCTCACCAGCCCCGGTGGCACATGCCACTTCAAGAAGATTaGTTCGATGTGGCCGATGCCCCGGCGCAGAGAGGAGCCCAGCCG | + |
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Preference number: 1 (lower is better) Translates to: QTSHQPRWHMPLQED*FDVADAPAQRGAQP Trigger: CGGCTGGGCTCCTCTCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR TCA 90 bp | GGACTCGTCGATGAAGGCCAGATTCTCACTGGGGTAATCCAGAGCTaGGGCCGTGGGCGGGGACGGAGTCTCAACCTTCTCTGCGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: GLVDEGQILTGVIQS*GRGRGRSLNLLCGC Trigger: GCACCCGCAGAGAAGGTTGAGACTCCGTCCCCGCCCACGGCCTCAGCTCTGGATTACCCCAGTGAGAATCTGGCCTTCATCGACGAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR TCA 90 bp | CCGAGGAGCCCGAGGCAGGGCACAGCCACGCTCACTCTGCGTGTCTaGGGACTCGTCGATGAAGGCCAGATTCTCACTGGGGTAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: PRSPRQGTATLTLRV*GLVDEGQILTGVIQ Trigger: CTGGATTACCCCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCTGTGCCCTGCCTCGGGCTCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237484.2 |
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| 3UTR TCA 90 bp | GCAGGGCACAGCCACGCTCACTCTGCGTGTCTGAGGACTCGTCGATaGAGGCCAGATTCTCACTGGGGTAATCCAGAGCTGAGGCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: AGHSHAHSACLRTRR*RPDSHWGNPELRPW Trigger: CCACGGCCTCAGCTCTGGATTACCCCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCTGTGCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR GCA 90 bp | AGGAAGAGCACTGCGGACAGACTTCTCACCAGCCCCGGTGGCACATaGCACTTCAAGAAGATTGCTTCGATGTGGCCGATGCCCCGGCGC | + |
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Preference number: 1 (lower is better) Translates to: RKSTADRLLTSPGGT*HFKKIASMWPMPRR Trigger: GCGCCGGGGCATCGGCCACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR TCA 90 bp | CCCGAGTTCGGCGGGACACTGCTCGCAACCAGTTGCCGATGGTGGTaGGCACTGAGGCGAAGTAGGCTAGGCCAAACAAGATCCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: PEFGGTLLATSCRWW*ALRRSRLGQTRSRT Trigger: GGTTCTGGATCTTGTTTGGCCTAGCCTACTTCGCCTCAGTGCTCACCACCATCGGCAACTGGTTGCGAGCAGTGTCCCGCCGAACTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR GCA 90 bp | AGGAGTGAGGACAAAGAGCAGGCAGCCGATCAGCAGGAAGAGCACTaGGGACAGACTTCTCACCAGCCCCGGTGGCACATGCCACTTCAA | + |
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Preference number: 1 (lower is better) Translates to: RSEDKEQAADQQEEH*GQTSHQPRWHMPLQ Trigger: TTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCTGCTGATCGGCTGCCTGCTCTTTGTCCTCACTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CCA 90 bp | AGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTTGCTGCTATTaGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCCAGGGCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: RRRCPGSKLMSGCCY*SSWFLGLRPLPGLQ Trigger: TTGAAGCCCTGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR GCA 90 bp | AGAAAAAGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTTGCTaGTATTGGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: RKRRRCPGSKLMSGC*YWSSWFLGLRPLPG Trigger: CCCTGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCTTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR GCA 90 bp | CCGAGAAAAAGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTTaGTGCTATTGGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: PRKRRRCPGSKLMSG*CYWSSWFLGLRPLP Trigger: TGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCTTTTTCTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR CCA 90 bp | GATCAGCAGGAAGAGCACTGCGGACAGACTTCTCACCAGCCCCGGTaGCACATGCCACTTCAAGAAGATTGCTTCGATGTGGCCGATGCC | + |
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Preference number: 1 (lower is better) Translates to: DQQEEHCGQTSHQPR*HMPLQEDCFDVADA Trigger: GGCATCGGCCACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCTGCTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR GCA 90 bp | CGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATaGCTGAGCATCAGCAAGAGCGAAAGCCCTGGCGTGGGATCCGGG | + |
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Preference number: 1 (lower is better) Translates to: RGTKEGRLFGQISQA*LSISKSESPGVGSG Trigger: CCCGGATCCCACGCCAGGGCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| 3UTR TCA 90 bp | CGAGGCAGAAAGCCTTGGATGGTGGGCTTTGGAAATGATTGGATGTaGAGAACCAGCCAGGGAAGAGCGGTGGCATTTGGCAACCACTGG | + |
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Preference number: 1 (lower is better) Translates to: RGRKPWMVGFGNDWM*RTSQGRAVAFGNHW Trigger: CCAGTGGTTGCCAAATGCCACCGCTCTTCCCTGGCTGGTTCTTCACATCCAATCATTTCCAAAGCCCACCATCCAAGGCTTTCTGCCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| 3UTR CCA 90 bp | GCTTTGGAAATGATTGGATGTGAAGAACCAGCCAGGGAAGAGCGGTaGCATTTGGCAACCACTGGACTCCTGTCAGGGTTGCAACCACGT | + |
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Preference number: 1 (lower is better) Translates to: ALEMIGCEEPAREER*HLATTGLLSGLQPR Trigger: ACGTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCGCTCTTCCCTGGCTGGTTCTTCACATCCAATCATTTCCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| 3UTR CCA 90 bp | GTGGCATTTGGCAACCACTGGACTCCTGTCAGGGTTGCAACCACGTaGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATG | + |
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Preference number: 1 (lower is better) Translates to: VAFGNHWTPVRVATT*NKRGTALWSNKPSM Trigger: CATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| 3UTR GCA 90 bp | TGCCTGAGTTCTAATCTCGGCGGCCTTGGGCAAGTTAATGCATGGTaGCTTTGTTTTCTCCTCTCACACATGGGAATGATGGTCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: CLSSNLGGLGQVNAW*LCFLLSHMGMMVRA Trigger: TGCTCTGACCATCATTCCCATGTGTGAGAGGAGAAAACAAAGGCACCATGCATTAACTTGCCCAAGGCCGCCGAGATTAGAACTCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| 3UTR GCA 90 bp | AGGGTGTCATATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RVSYLITDGCEPPCG*WDLNSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATATGACACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| 3UTR TCA 90 bp | AAGTTAATGCATGGTGCCTTTGTTTTCTCCTCTCACACATGGGAATaGTGGTCAGAGCACCAATATCATAGATTTGGCATACAGAATAAA | + |
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Preference number: 1 (lower is better) Translates to: KLMHGAFVFSSHTWE*WSEHQYHRFGIQNK Trigger: TTTATTCTGTATGCCAAATCTATGATATTGGTGCTCTGACCATCATTCCCATGTGTGAGAGGAGAAAACAAAGGCACCATGCATTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTGGCGGCGGGGCGCTGGAGGGCAGGAGTGGTTaGTCCTTCTCTGGCGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: AGKEEGRSGCSFSGGGALEGRSG*SFSGGG Trigger: CCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTC...CAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTGGCGGCGGGGCGCTAGTCTCAACCTTCTCTaGGGGTGCAGGGGAGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: CRQRGGQEWLLLLWRRGASLNLL*GCRGAG Trigger: CCCGGCTCCCCTGCACCCGCAGAGAAGGTTGAGACT...AGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCAGTTCGCTGGGTCACTCGCGCTGTCACTGTGCCGGTCCAGCTAGCAGCGGTCCAGCTGGTTTCTaGGTTTGCGCCCCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GPSSLGHSRCHCAGPASSGPAGF*VCAPSQ Trigger: CTGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACC...GCTGCTAGCTGGACCGGCACAGTGACAGCGCGAGTGACCCAGCGAACTGGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTGGCGGCGGGGCGCAGCAGGAAGAGCACTaGGGACAGACTTCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GAGKEEGRSGCSFSGGGAQQEEH*GQTSHQ Trigger: CTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCTGCTG...CGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CAA 90 bp | ACAGACTTCTCACCAGCCCCGGTGGCACATGCCACTTCAAGAAGATaGCTTCGATGTGGCCGATGCCCCGGCGCAGAGAGGAGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TDFSPAPVAHATSRR*LRCGRCPGAERSPA Trigger: GGCTGGGCTCCTCTCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGATTGCTTCGATGTGGCCGATGCCCCGGCGCAGAGAGGAGCCCAGCCGGTCCAGCAGGAAGAGCACTaGGGACAGACTTCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: EDCFDVADAPAQRGAQPVQQEEH*GQTSHQ Trigger: CTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCTGCTG...GACCGGCTGGGCTCCTCTCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGCGGCTGGTAGGCTGGAGAGTTCTGCCCGGTGCCATCGCCGGGTACATAGTTCGGCGGGACACTaGTCGCAACCAGTTGCCGAT | + |
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Preference number: 2 (lower is better) Translates to: TPAAGRLESSARCHRRVHSSAGH*SQPVAD Trigger: ATCGGCAACTGGTTGCGAGCAGTGTCCCGCCGAACT...ATGTACCCGGCGATGGCACCGGGCAGAACTCTCCAGCCTACCAGCCGCTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATTGCTTCGATGTGGCCGATGCCCCGGCGCAGAGAGGAGCCCAGCCGGTCCAGCATCCCGAACAGTaGGATCCCCACCAGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: EDCFDVADAPAQRGAQPVQHPEQ*DPHQCI Trigger: TATGCACTGGTGGGGATCCCACTGTTCGGGATGCTG...GACCGGCTGGGCTCCTCTCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTTCGCTGGGTCACTCGCGCTGTCACTGTGCCGGTCCAGCTAGCAGCCTGCAGCATCCCGAACAGTaGGATCCCCACCAGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: PSSLGHSRCHCAGPASSLQHPEQ*DPHQCI Trigger: TATGCACTGGTGGGGATCCCACTGTTCGGGATGCTG...CAGGCTGCTAGCTGGACCGGCACAGTGACAGCGCGAGTGACCCAGCGAACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGCCGATCAGCAGGAAGAGCACTGCGGACAGACTTCTCACCAGCCCCGGAAGATTGCTTCGATGTaGCCGATGCCCCGGCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QAADQQEEHCGQTSHQPRKIASM*PMPRRR Trigger: TCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTT...CCGGGGCTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCTGCTGATCGGCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGATTCTCACTGGGGTAATCCAGAGCTGAGGCCGTGGGCGGGGACGGAGCTGAGGACTCGTCGATaGAGGCCAGATTCTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: RPDSHWGNPELRPWAGTELRTRR*RPDSHW Trigger: CCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAG...CTCCGTCCCCGCCCACGGCCTCAGCTCTGGATTACCCCAGTGAGAATCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCAACCTTCTCTGCGGGTGCAGGGGAGCCGGGCCTGCCGGCTGGCTCAACCTGATGAGTGGTTGCTaGTATTGGTCCAGCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SLNLLCGCRGAGPAGWLNLMSGC*YWSSWF Trigger: AAACCAGCTGGACCAATAGCAGCAACCACTCATCAG...GTTGAGCCAGCCGGCAGGCCCGGCTCCCCTGCACCCGCAGAGAAGGTTGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGGTCACTCGCGCTGTCACTGTGCCGGTCCAGCTAGCAGCCTGTGCCGTTAGAAAAAGAAGGCGCTaGCCAGGTTCCAAGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: RWVTRAVTVPVQLAACAVRKRRR*PGSKLM Trigger: CATCAGCTTGGAACCTGGGCAGCGCCTTCTTTTTCT...AACGGCACAGGCTGCTAGCTGGACCGGCACAGTGACAGCGCGAGTGACCCAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR CAA 90 bp | AAGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTTGCTGCTATaGGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCCAGGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KKALPRFQADEWLLL*VQLVSGFAPPPRAS Trigger: TGAAGCCCTGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR CAA 90 bp | CCCGAGAAAAAGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTaGCTGCTATTGGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PEKKKALPRFQADEW*LLLVQLVSGFAPPP Trigger: GGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCTTTTTCTCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR CAA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GCEPPCGCWDLNSGP*EEQSVLLTTEPSVQ Trigger: CTGGACAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| 3UTR-3UTR CCA 90 bp | TACATAATCGCCAAAGCCTACAGTGGTGAGAGTCACTATAACAAAGTAGATGGCAGTGGTTGCTGCTATTaGTCCAGCTGGTTTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YIIAKAYSGESHYNKVDGSGCCY*SSWFLG Trigger: ACCCAGAAACCAGCTGGACCAATAGCAGCAACCACT...GCCATCTACTTTGTTATAGTGACTCTCACCACTGTAGGCTTTGGCGATTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACAAGTTAATGCATGGTaGCTTTGTTTTCTCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CGCWDLNSGPLEEQSVLLQVNAW*LCFLLS Trigger: TGAGAGGAGAAAACAAAGGCACCATGCATTAACTTG...TAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| 3UTR GCA 72 bp | GCAGGCGGTGCCGGCAAAGAGGAGGGCAGGAGTGGTTaGTCCTTCTCTGGCGGCGGGGCGCTGGGCCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: AGGAGKEEGRSG*SFSGGGALGPV Trigger: AACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR GCA 72 bp | CGTGGGCGGGGACGGAGTCTCAACCTTCTCTGCGGGTaGAGGGGAGCCGGGCCTGCCGGCTGGCTCAACAAC | + |
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Preference number: 3 (lower is better) Translates to: RGRGRSLNLLCG*RGAGPAGWLNN Trigger: GTTGTTGAGCCAGCCGGCAGGCCCGGCTCCCCTGCACCCGCAGAGAAGGTTGAGACTCCGTCCCCGCCCACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CCA 72 bp | AACAGCAGGCGGTGCCGGCAAAGAGGAGGGCAGGAGTaGTTGCTCCTTCTCTGGCGGCGGGGCGCTGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: NSRRCRQRGGQE*LLLLWRRGAGP Trigger: GGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCTGCTGTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
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| 3UTR CCA 72 bp | TCCTTCTCTGGCGGCGGGGCGCTGGGCCCAGTTCGCTaGGTCACTCGCGCTGTCACTGTGCCGGTCCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SFSGGGALGPVR*VTRAVTVPVQL Trigger: TAGCTGGACCGGCACAGTGACAGCGCGAGTGACCCAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR CCA 72 bp | GCAGGAGTGGTTGCTCCTTCTCTGGCGGCGGGGCGCTaGGCCCAGTTCGCTGGGTCACTCGCGCTGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: AGVVAPSLAAGR*AQFAGSLALSL Trigger: CAGTGACAGCGCGAGTGACCCAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR CCA 72 bp | CGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTaGCGGCGGGGCGCTGGGCCCAGTTCGCTGGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RQRGGQEWLLLL*RRGAGPSSLGH Trigger: GTGACCCAGCGAACTGGGCCCAGCGCCCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR GCA 72 bp | GCCGGGCCTGCCGGCTGGCTCAACAACAGCAGGCGGTaGCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGPAGWLNNSRR*RQRGGQEWLLL Trigger: AAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCTGCTGTTGTTGAGCCAGCCGGCAGGCCCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR GCA 72 bp | CGAGGAGCCCGAGGCAGGGCACAGCCACGCTCACTCTaGGTGTCTGAGGACTCGTCGATGAAGGCCAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: RGARGRAQPRSL*VSEDSSMKARF Trigger: GAATCTGGCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCTGTGCCCTGCCTCGGGCTCCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237484.2 |
||
| 3UTR CCA 72 bp | GGTGGCACATGCCACTTCAAGAAGATTGCTTCGATGTaGCCGATGCCCCGGCGCAGAGAGGAGCCCAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GGTCHFKKIASM*PMPRRREEPSR Trigger: CCGGCTGGGCTCCTCTCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR TCA 72 bp | CCGAGGCAGGGCACAGCCACGCTCACTCTGCGTGTCTaGGGACTCGTCGATGAAGGCCAGATTCTCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PRQGTATLTLRV*GLVDEGQILTG Trigger: CCCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCTGTGCCCTGCCTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR CCA 72 bp | CCAGATTCTCACTGGGGTAATCCAGAGCTGAGGCCGTaGGCGGGGACGGAGTCTCAACCTTCTCTGCGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PDSHWGNPELRP*AGTESQPSLRV Trigger: CACCCGCAGAGAAGGTTGAGACTCCGTCCCCGCCCACGGCCTCAGCTCTGGATTACCCCAGTGAGAATCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR GCA 72 bp | ACACCAGCGGCTGGTAGGCTGGAGAGTTCTGCCCGGTaGCATCGCCGGGTACATAATCGCCAAAGCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: TPAAGRLESSAR*HRRVHNRQSLQ Trigger: CTGTAGGCTTTGGCGATTATGTACCCGGCGATGGCACCGGGCAGAACTCTCCAGCCTACCAGCCGCTGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR TCA 72 bp | GATGAAGGCCAGATTCTCACTGGGGTAATCCAGAGCTaGGGCCGTGGGCGGGGACGGAGTCTCAACCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DEGQILTGVIQS*GRGRGRSLNLL Trigger: GAGAAGGTTGAGACTCCGTCCCCGCCCACGGCCTCAGCTCTGGATTACCCCAGTGAGAATCTGGCCTTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR GCA 72 bp | AGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTTGCTaGTATTGGTCCAGCTGGTTTCTGGGTTTGCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RRCPGSKLMSGC*YWSSWFLGLRP Trigger: GGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| 3UTR CCA 72 bp | AAACAAGATCCAGAACCACACCAGCGGCTGGTAGGCTaGAGAGTTCTGCCCGGTGCCATCGCCGGGTACATA | + |
|
Preference number: 3 (lower is better) Translates to: KQDPEPHQRLVG*RVLPGAIAGYI Trigger: TATGTACCCGGCGATGGCACCGGGCAGAACTCTCCAGCCTACCAGCCGCTGGTGTGGTTCTGGATCTTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR CCA 72 bp | TGCCCAGGTTCCAAGCTGATGAGTGGTTGCTGCTATTaGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CPGSKLMSGCCY*SSWFLGLRPLP Trigger: TGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| 3UTR TCA 72 bp | AGCCACGCTCACTCTGCGTGTCTGAGGACTCGTCGATaGAGGCCAGATTCTCACTGGGGTAATCCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SHAHSACLRTRR*RPDSHWGNPEL Trigger: CAGCTCTGGATTACCCCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR GCA 72 bp | ACTGCGGACAGACTTCTCACCAGCCCCGGTGGCACATaGCACTTCAAGAAGATTGCTTCGATGTGGCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: TADRLLTSPGGT*HFKKIASMWPM Trigger: CATCGGCCACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTGTCCGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR GCA 72 bp | AGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTTaGTGCTATTGGTCCAGCTGGTTTCTGGGTTTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RRRCPGSKLMSG*CYWSSWFLGLR Trigger: GCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| 3UTR CCA 72 bp | GATGTGAAGAACCAGCCAGGGAAGAGCGGTGGCATTTaGCAACCACTGGACTCCTGTCAGGGTTGCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: DVKNQPGKSGGI*QPLDSCQGCNH Trigger: GTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCGCTCTTCCCTGGCTGGTTCTTCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR GCA 72 bp | GGTGGCATTTGGCAACCACTGGACTCCTGTCAGGGTTaGAACCACGTGGAACAAAAGAGGGACGGCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGIWQPLDSCQG*NHVEQKRDGSL Trigger: CAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CCA 72 bp | GAAGAGCACTGCGGACAGACTTCTCACCAGCCCCGGTaGCACATGCCACTTCAAGAAGATTGCTTCGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: EEHCGQTSHQPR*HMPLQEDCFDV Trigger: CACATCGAAGCAATCTTCTTGAAGTGGCATGTGCCACCGGGGCTGGTGAGAAGTCTGTCCGCAGTGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| 3UTR TCA 72 bp | GCGAGGCAGAAAGCCTTGGATGGTGGGCTTTGGAAATaGTTGGATGTGAAGAACCAGCCAGGGAAGAGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: ARQKALDGGLWK*LDVKNQPGKSG Trigger: ACCGCTCTTCCCTGGCTGGTTCTTCACATCCAATCATTTCCAAAGCCCACCATCCAAGGCTTTCTGCCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR GCA 72 bp | AAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATaGCTGAGCATCAGCAAGAGCGAAAGCCCTGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: KEGRLFGQISQA*LSISKSESPGV Trigger: CACGCCAGGGCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CCA 72 bp | ATGATTGGATGTGAAGAACCAGCCAGGGAAGAGCGGTaGCATTTGGCAACCACTGGACTCCTGTCAGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: MIGCEEPAREER*HLATTGLLSGL Trigger: CAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCGCTCTTCCCTGGCTGGTTCTTCACATCCAATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR TCA 72 bp | AAGCCTTGGATGGTGGGCTTTGGAAATGATTGGATGTaGAGAACCAGCCAGGGAAGAGCGGTGGCATTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KPWMVGFGNDWM*RTSQGRAVAFG Trigger: GCCAAATGCCACCGCTCTTCCCTGGCTGGTTCTTCACATCCAATCATTTCCAAAGCCCACCATCCAAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CCA 72 bp | AAAAAGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTaGTTGCTGCTATTGGTCCAGCTGGTTTCTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KKKALPRFQADE*LLLLVQLVSGF Trigger: AAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| 3UTR TCA 72 bp | CATGGTGCCTTTGTTTTCTCCTCTCACACATGGGAATaGTGGTCAGAGCACCAATATCATAGATTTGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: HGAFVFSSHTWE*WSEHQYHRFGI Trigger: TATGCCAAATCTATGATATTGGTGCTCTGACCATCATTCCCATGTGTGAGAGGAGAAAACAAAGGCACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAGGGTCAAAACCGGCAGGGGAGCGAGGCAGAAAGCCTTGGATGGTGGGCTGGGGTAATCCAGAGCTaGGGCCGTGGGCGGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: CEGQNRQGSEAESLGWWAGVIQS*GRGRGR Trigger: CCGTCCCCGCCCACGGCCTCAGCTCTGGATTACCCC...AGCCCACCATCCAAGGCTTTCTGCCTCGCTCCCCTGCCGGTTTTGACCCTCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCGGTGCCGGCAAAGAGGAGGGCAGGAGTGGTTGCTCCTTCTCTGGCGGCGGGCTGCTCCAGAGCCTaGAACACTAGAGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QAVPAKRRAGVVAPSLAAGCSRA*NTRAPD Trigger: ATCTGGGGCTCTAGTGTTCCAGGCTCTGGAGCAGCC...CGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCTTTGCCGGCACCGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000237484.2 |
||
| CDS-3UTR TCA 90 bp | ACACCAGCGGCTGGTAGGCTGGAGAGTTCTGCCCGGTGCCATCGCCGGGTACATGGTCATTCTGTCCTGTaGGCAGCAGACTCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPAAGRLESSARCHRRVHGHSVL*AADSTL Trigger: AAGGGTGGAGTCTGCTGCTCACAGGACAGAATGACC...ATGTACCCGGCGATGGCACCGGGCAGAACTCTCCAGCCTACCAGCCGCTGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| CDS-3UTR CCA 90 bp | CGGGGACGGAGTCTCAACCTTCTCTGCGGGTGCAGGGGAGCCGGGCCTGCCGGCTTCACACTGCTCCTGTaGAATCTTGATGAAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRSLNLLCGCRGAGPAGFTLLL*NLDEIL Trigger: GAGGATTTCATCAAGATTCCACAGGAGCAGTGTGAA...GCCGGCAGGCCCGGCTCCCCTGCACCCGCAGAGAAGGTTGAGACTCCGTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGCATGCCTGAGCATCAGCAAGAGCGAAAGCCCTGGCGTGGGATCCGGGTCCAGCAGGAAGAGCACTaGGGACAGACTTCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSMPEHQQERKPWRGIRVQQEEH*GQTSHQ Trigger: CTGGTGAGAAGTCTGTCCGCAGTGCTCTTCCTGCTG...GACCCGGATCCCACGCCAGGGCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CAA 72 bp | CTGCCCAGGTTCCAAGCTGATGAGTGGTTGCTGCTATaGGTCCAGCTGGTTTCTGGGTTTGCGCCCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRFQADEWLLL*VQLVSGFAPPP Trigger: GGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGAGCGGTGGCATTTGGCAACCACTGGACTCCTGTCAGGGTTGCAACCACCTGAGGACTCGTCGATaGAGGCCAGATTCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSGGIWQPLDSCQGCNHLRTRR*RPDSHW Trigger: CCAGTGAGAATCTGGCCTTCATCGACGAGTCCTCAG...GTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCGCTCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAACCTTCTCTGCGGGTaGAGGGGAGCCGGGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTKEGRLFGQISQACLSINLLCG*RGAGPA Trigger: GGCAGGCCCGGCTCCCCTGCACCCGCAGAGAAGGTT...GATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAGCAAGAGCGAAAGCCCAGTCTCAACCTTCTCTaGGGGTGCAGGGGAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWSNKPSMPEHQQERKPSLNLL*GCRGAG Trigger: CCCGGCTCCCCTGCACCCGCAGAGAAGGTTGAGACT...GGGCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAGCAAGAGCAGAGGAGGGCAGGAGTaGTTGCTCCTTCTCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGRLFGQISQACLSISKSRGGQE*LLLLWR Trigger: CCGCCAGAGAAGGAGCAACCACTCCTGCCCTCCTCT...GCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CAA 72 bp | AGTGGTTGCTGCTATTGGTCCAGCTGGTTTCTGGGTTaGCGCCCCCTCCCAGGGCTTCAACCAGGAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGCCYWSSWFLG*RPLPGLQPGEN Trigger: ATTCTCTCCTGGTTGAAGCCCTGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGAGCGGTGGCATTTGGCAACCACTGGACTCCTGTCAGGGTTGCAACCACAGAAAAAGAAGGCGCTaGCCAGGTTCCAAGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKSGGIWQPLDSCQGCNHRKRRR*PGSKLM Trigger: CATCAGCTTGGAACCTGGGCAGCGCCTTCTTTTTCT...GTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCGCTCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATGAGGGCAGGAGTGGTTaGTCCTTCTCTGGCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WNKRGTALWSNKPSMPEHEGRSG*SFSGGG Trigger: CCCGCCGCCAGAGAAGGAGCAACCACTCCTGCCCTC...ATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAGCAAGAGCGAAAGCCAGCCACGCTCACTCTaGGTGTCTGAGGACTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLFGQISQACLSISKSESQPRSL*VSEDSS Trigger: CGACGAGTCCTCAGACACGCAGAGTGAGCGTGGCTG...GCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCAACCACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCGGTCCAGCTGGTTTCTaGGTTTGCGCCCCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VATTWNKRGTALWSNKPSGPAGF*VCAPSQ Trigger: CTGGGAGGGGGCGCAAACCCAGAAACCAGCTGGACC...GCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAGCAAGAGCAAGATTGCTTCGATGTaGCCGATGCCCCGGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGRLFGQISQACLSISKSKIASM*PMPRRR Trigger: TCTGCGCCGGGGCATCGGCCACATCGAAGCAATCTT...GCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | CAACCACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGGGCCCAGTTCGCTaGGTCACTCGCGCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QPRGTKEGRLFGQISQACLGPVR*VTRAVT Trigger: AGTGACAGCGCGAGTGACCCAGCGAACTGGGCCCAG...GCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CAA 72 bp | CGGTGGCATTTGGCAACCACTGGACTCCTGTCAGGGTaGCAACCACGTGGAACAAAAGAGGGACGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RWHLATTGLLSG*QPRGTKEGRLF Trigger: AAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| 3UTR CAA 72 bp | AAGAAGGCGCTGCCCAGGTTCCAAGCTGATGAGTGGTaGCTGCTATTGGTCCAGCTGGTTTCTGGGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KKALPRFQADEW*LLLVQLVSGFA Trigger: CGCAAACCCAGAAACCAGCTGGACCAATAGCAGCAACCACTCATCAGCTTGGAACCTGGGCAGCGCCTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTGCAACCACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAACTCACTCTGCGTGTCTaGGGACTCGTCGATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQPRGTKEGRLFGQISQLTLRV*GLVDEG Trigger: GCCTTCATCGACGAGTCCTCAGACACGCAGAGTGAG...TTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | CAACCACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCGGCTGCTCCAGAGCCTaGAACACTAGAGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPRGTKEGRLFGQISQACGCSRA*NTRAPD Trigger: ATCTGGGGCTCTAGTGTTCCAGGCTCTGGAGCAGCC...GCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR TCA 90 bp | TGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATAGTTGCCGATGGTGGTaGGCACTGAGGCGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNKRGTALWSNKPSMPEHSCRWW*ALRRSR Trigger: CCTACTTCGCCTCAGTGCTCACCACCATCGGCAACT...ATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATAGTTCGGCGGGACACTaGTCGCAACCAGTTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: WNKRGTALWSNKPSMPEHSSAGH*SQPVAD Trigger: ATCGGCAACTGGTTGCGAGCAGTGTCCCGCCGAACT...ATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCAACCACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCCAGCATCCCGAACAGTaGGATCCCCACCAGTGCATA | + |
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Preference number: 4 (lower is better) Translates to: VATTWNKRGTALWSNKPSQHPEQ*DPHQCI Trigger: TATGCACTGGTGGGGATCCCACTGTTCGGGATGCTG...GCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAACTCCACCCTTCACACTaGTCCTGTGGAATCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCWDLNSGPLELHPSH*SCGILM Trigger: CATCAAGATTCCACAGGAGCAGTGTGAAGGGTGGAG...TTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| CDS-3UTR CCA 90 bp | GGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAGTGGTTGCTGCTATTaGTCCAGCTGGTTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GTKEGRLFGQISQACLSISGCCY*SSWFLG Trigger: ACCCAGAAACCAGCTGGACCAATAGCAGCAACCACT...GATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR CCA 90 bp | CGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATCAGCAAGAGCGAAAGCTTCCAAGCTGATGAGTaGTTGCTGCTATTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLFGQISQACLSISKSESFQADE*LLLLVQ Trigger: CTGGACCAATAGCAGCAACCACTCATCAGCTTGGAA...GCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR GCA 90 bp | ACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCTGATGAGTGGTTGCTaGTATTGGTCCAGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TWNKRGTALWSNKPSMPELMSGC*YWSSWF Trigger: AAACCAGCTGGACCAATAGCAGCAACCACTCATCAG...CTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR CCA 90 bp | TCGGCGGCCTTGGGCAAGTTAATGCATGGTGCCTTTGTTTTCTCCTCTCACACATTCACACTGCTCCTGTaGAATCTTGATGAAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: SAALGKLMHGAFVFSSHTFTLLL*NLDEIL Trigger: GAGGATTTCATCAAGATTCCACAGGAGCAGTGTGAA...TGTGTGAGAGGAGAAAACAAAGGCACCATGCATTAACTTGCCCAAGGCCGCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236443.2 |
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| CDS-3UTR GCA 90 bp | TACATAATCGCCAAAGCCTACAGTGGTGAGAGTCACTATAACAAAGTAGATGGCCTCCACCCTTCACACTaGTCCTGTGGAATCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: YIIAKAYSGESHYNKVDGLHPSH*SCGILM Trigger: CATCAAGATTCCACAGGAGCAGTGTGAAGGGTGGAG...GCCATCTACTTTGTTATAGTGACTCTCACCACTGTAGGCTTTGGCGATTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235279.2 |
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| CDS-3UTR CAA 90 bp | CCAAGCATGCCTGAGCATCAGCAAGAGCGAAAGCCCTGGCGTGGGATCCGGGTCACTGCTCGCAACCAGTaGCCGATGGTGGTGAGCACT | + |
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Preference number: 5 (lower is better) Translates to: PSMPEHQQERKPWRGIRVTARNQ*PMVVST Trigger: AGTGCTCACCACCATCGGCAACTGGTTGCGAGCAGT...GACCCGGATCCCACGCCAGGGCTTTCGCTCTTGCTGATGCTCAGGCATGCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR CAA 90 bp | AAGAGCGGTGGCATTTGGCAACCACTGGACTCCTGTCAGGGTTGCAACCACGTGTACACCGGCACGGCCTaGTCTCGGAGTCGCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: KSGGIWQPLDSCQGCNHVYTGTA*SRSRPG Trigger: TCCTGGGCGACTCCGAGACAAGGCCGTGCCGGTGTA...CACGTGGTTGCAACCCTGACAGGAGTCCAGTGGTTGCCAAATGCCACCGCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR CAA 90 bp | CGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCAGCTGGTTTCTGGGTTaGCGCCCCCTCCCAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RGTKEGRLFGQISQACLSSWFLG*RPLPGL Trigger: AAGCCCTGGGAGGGGGCGCAAACCCAGAAACCAGCT...GCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAGCCTGTGCCGTTAGGCCACCCATCTCTGCCCGAGTTCGGCGGGACACTTATATTGCCATAGCCTaGATGAAATCCTCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LAACAVRPPISARVRRDTYIAIA*MKSSRL Trigger: GAGCCTGGAGGATTTCATCAAGGCTATGGCAATATA...AGTGTCCCGCCGAACTCGGGCAGAGATGGGTGGCCTAACGGCACAGGCTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237484.2 |
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| CDS CCA 90 bp | ATTCTGTCCTGTGAGCAGCAGACTCCACCCTTCACACTGCTCCTGTaGAATCTTGATGAAATCCTCCAGGCTCTTCTGGCTCACACAGGG | + |
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Preference number: 5 (lower is better) Translates to: ILSCEQQTPPFTLLL*NLDEILQALLAHTG Trigger: CCCTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGATTCCACAGGAGCAGTGTGAAGGGTGGAGTCTGCTGCTCACAGGACAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000236443.2 |
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| CDS-3UTR CAA 90 bp | TGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCATGCCTGAGCATGGTCTGGAAGGCTTTTaGGATGGGTTGGGTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: WNKRGTALWSNKPSMPEHGLEGF*DGLGRR Trigger: CCGCCGACCCAACCCATCCAAAAAGCCTTCCAGACC...ATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS-3UTR CAA 90 bp | GTTGCAACCACGTGGAACAAAAGAGGGACGGCTCTTTGGTCAAATAAGCCAAGCGCTTCAACCAGGAGCTaGATGAAATCCTCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VATTWNKRGTALWSNKPSASTRS*MKSSRL Trigger: GAGCCTGGAGGATTTCATCAAGCTCCTGGTTGAAGC...GCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTTTTGTTCCACGTGGTTGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025908.8 |
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| CDS CAA 72 bp | GGGTTTGCGCCCCCTCCCAGGGCTTCAACCAGGAGCTaGATGAAATCCTCCAGGCTCTTCTGGCTCACACAG | + |
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Preference number: 6 (lower is better) Translates to: GFAPPPRASTRS*MKSSRLFWLTQ Trigger: CTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGCTCCTGGTTGAAGCCCTGGGAGGGGGCGCAAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025908.8 ENSMUST00000235248.2 |
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| CDS CAA 90 bp | CTGGTTTCTGGGTTTGCGCCCCCTCCCAGGGCTTCAACCAGGAGCTaGATGAAATCCTCCAGGCTCTTCTGGCTCACACAGGGATGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LVSGFAPPPRASTRS*MKSSRLFWLTQGWS Trigger: GGACCATCCCTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGCTCCTGGTTGAAGCCCTGGGAGGGGGCGCAAACCCAGAAACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025908.8 ENSMUST00000235248.2 |
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| CDS CAA 90 bp | CCTGTGAGCAGCAGACTCCACCCTTCACACTGCTCCTGTGGAATCTaGATGAAATCCTCCAGGCTCTTCTGGCTCACACAGGGATGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PVSSRLHPSHCSCGI*MKSSRLFWLTQGWS Trigger: GGACCATCCCTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGATTCCACAGGAGCAGTGTGAAGGGTGGAGTCTGCTGCTCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000236443.2 |
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| CDS GCA 72 bp | TTCTGTCCTGTGAGCAGCAGACTCCACCCTTCACACTaGTCCTGTGGAATCTTGATGAAATCCTCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FCPVSSRLHPSH*SCGILMKSSRL Trigger: GAGCCTGGAGGATTTCATCAAGATTCCACAGGAGCAGTGTGAAGGGTGGAGTCTGCTGCTCACAGGACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000236443.2 |
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| CDS CCA 72 bp | TCAACCAGGAGCTTGATGAAATCCTCCAGGCTCTTCTaGCTCACACAGGGATGGTCCCTCAGAAACTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: STRSLMKSSRLF*LTQGWSLRNWS Trigger: AGACCAGTTTCTGAGGGACCATCCCTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGCTCCTGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025908.8 ENSMUST00000235248.2 |
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| CDS CAA 72 bp | AGCAGACTCCACCCTTCACACTGCTCCTGTGGAATCTaGATGAAATCCTCCAGGCTCTTCTGGCTCACACAG | + |
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Preference number: 6 (lower is better) Translates to: SRLHPSHCSCGI*MKSSRLFWLTQ Trigger: CTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGATTCCACAGGAGCAGTGTGAAGGGTGGAGTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235279.2 ENSMUST00000236443.2 |
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| CDS CCA 72 bp | ATTGCCATAGCCTTGATGAAATCCTCCAGGCTCTTCTaGCTCACACAGGGATGGTCCCTCAGAAACTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IAIALMKSSRLF*LTQGWSLRNWS Trigger: AGACCAGTTTCTGAGGGACCATCCCTGTGTGAGCCAGAAGAGCCTGGAGGATTTCATCAAGGCTATGGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237484.2 |
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