Pregenerated sensors for KCNK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049265Ensembl transcript IDs: ENSMUST00000066295.5
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGGAGTCTCTCAGGAGCCCCTGAGAATGTTCCCAGACTCCAGGTaGCTCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGT | + |
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Preference number: 1 (lower is better) Translates to: AGVSQEPLRMFPDSR*LTYRCPPRRGGSHS Trigger: ACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGAGCCACCTGGAGTCTGGGAACATTCTCAGGGGCTCCTGAGAGACTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 90 bp | CCATGGACAGCATTTATTAGGCGCCATTCTCAGTGTGAAGACAGATaGGCAGGAGCTGCTGAAAAGGGGGCCAGGGCAGCCACAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PWTAFIRRHSQCEDR*AGAAEKGARAATAW Trigger: CCAGGCTGTGGCTGCCCTGGCCCCCTTTTCAGCAGCTCCTGCCCATCTGTCTTCACACTGAGAATGGCGCCTAATAAATGCTGTCCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 90 bp | ACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTaGGGAAGCAGAAAGGCTGCCTGCATGGGAGGGGGTGAGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: THIAYSVAVCPGIRH*GSRKAACMGGGETG Trigger: TCCTGTCTCACCCCCTCCCATGCAGGCAGCCTTTCTGCTTCCCCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR GCA 90 bp | ATAGCAGGCCCAATACCTCCTTCCCTCCAGAGGGGTGTTCCTGGCTaGAGTGGAAGTTACTCTAGCAACTTAGGATGCATTTATCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: IAGPIPPSLQRGVPG*SGSYSSNLGCIYPG Trigger: GCCAGGATAAATGCATCCTAAGTTGCTAGAGTAACTTCCACTGCAGCCAGGAACACCCCTCTGGAGGGAAGGAGGTATTGGGCCTGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCACTCAGCAGCTCCCCGTaGCTGCTTTCCGGGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: VTLVVAPSDLTGLDPSRALSSSP*LLSGLP Trigger: GGGGAGCCCGGAAAGCAGCCACGGGGAGCTGCTGAG...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCAGGGGCTTCGCTTCTGAGGGCAGGCTGAGCCTGAAGAAAGAGCACTTGAGAGCCAGGTGGGACTaGGTGGGGGTGACCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: ACRGFASEGRLSLKKEHLRARWD*VGVTWT Trigger: TGTCCAGGTCACCCCCACTCAGTCCCACCTGGCTCT...CAAGTGCTCTTTCTTCAGGCTCAGCCTGCCCTCAGAAGCGAAGCCCCTGCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCAGAAGGCTGGGAGACATaGCTGGGGATGAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSEGWET*LGMRAR Trigger: CCTGGCTCTCATCCCCAGCCATGTCTCCCAGCCTTC...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCAGCTCTGCCCAGTCCCTaGACTCTCAAGAGTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSALPSP*TLKSAN Trigger: GTTGGCACTCTTGAGAGTTCAGGGACTGGGCAGAGC...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCAGGGGCTTCGCTTCTGAGGGCAGGCTGAGCCTGAAGAAAGAGCACTTGATTCTTCGGCTCCGATaGGGGCTCCAGGGGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ACRGFASEGRLSLKKEHLILRLR*GLQGSS Trigger: TGAGGACCCCTGGAGCCCCCATCGGAGCCGAAGAAT...CAAGTGCTCTTTCTTCAGGCTCAGCCTGCCCTCAGAAGCGAAGCCCCTGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCACAAGCCACCCTCCACTaGGTTGCAGGTAGAGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSQATLH*VAGRGG Trigger: ACCTCCTCTACCTGCAACCCAGTGGAGGGTGGCTTG...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCAGGGGCTTCGCTTCTGAGGGCAGGCTGAGCCTGAAGAAAGAGCACTTGCTATGGACGAGTGAATaGGCAGCTGCAGCCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: ACRGFASEGRLSLKKEHLLWTSE*AAAARD Trigger: GTCCCTGGCTGCAGCTGCTCATTCACTCGTCCATAG...CAAGTGCTCTTTCTTCAGGCTCAGCCTGCCCTCAGAAGCGAAGCCCCTGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCTCAGTCTCTGGGCTAAAGAGTACCAGAGGCAGAGCCCTGGCAGTGGCTCTGCCTACACAAAGCTaGGGTGTTGCCTGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RASVSGLKSTRGRALAVALPTQS*GVACRG Trigger: GCCCCTGCAGGCAACACCCCAGCTTTGTGTAGGCAG...AGCCACTGCCAGGGCTCTGCCTCTGGTACTCTTTAGCCCAGAGACTGAGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTGTGAAGACAGATGGGCAGGAGCTGCTGAAAAGGGGGCCAGGGCAGCCATCTCTCAGGAGCCCCTaGGAATGTTCCCAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSVKTDGQELLKRGPGQPSLRSP*ECSQTP Trigger: TGGAGTCTGGGAACATTCTCAGGGGCTCCTGAGAGA...TGGCTGCCCTGGCCCCCTTTTCAGCAGCTCCTGCCCATCTGTCTTCACACTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGGGTGACCTGGACAAAAACACCTTGGGCTTTGGAGAACCCAGAGGAGGTAACTCCTGCGGCTTCTaGAGGCAGGTCCCCTACCCC | + |
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Preference number: 2 (lower is better) Translates to: SGGDLDKNTLGFGEPRGGNSCGF*RQVPYP Trigger: GGGGTAGGGGACCTGCCTGCAGAAGCCGCAGGAGTT...ACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTTTTGTCCAGGTCACCCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR GCA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAACAAAGCTGGGGTGTTaGCTGCAGGGGCTTCGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VTLVVAPSDLTGLDPSRATKLGC*LQGLRF Trigger: GAAGCGAAGCCCCTGCAGGCAACACCCCAGCTTTGT...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGGGTGACCTGGACAAAAACACCTTGGGCTTTGGAGAACCCAGAGGAGGTGGTCCCCTACCCCTCTaGCTCACAGGTGCTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SGGDLDKNTLGFGEPRGGGPLPL*LTGAPG Trigger: ACCTGGAGCACCTGTGAGCCAGAGGGGTAGGGGACC...ACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTTTTGTCCAGGTCACCCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGACTGAGTGGGGGTaGCCTGGACAAAAACACCTT | + |
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Preference number: 2 (lower is better) Translates to: VTLVVAPSDLTGLDPSRAGTEWG*PGQKHL Trigger: AAGGTGTTTTTGTCCAGGTCACCCCCACTCAGTCCC...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCTCAGTCTCTGGGCTAAAGAGTACCAGAGGCAGAGCCCTGGCAGTGGCTCAACCTATGGACGAGTaGATGAGCAGCTGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RASVSGLKSTRGRALAVAQPMDE*MSSCSQ Trigger: CTGGCTGCAGCTGCTCATTCACTCGTCCATAGGTTG...AGCCACTGCCAGGGCTCTGCCTCTGGTACTCTTTAGCCCAGAGACTGAGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTGTGAAGACAGATGGGCAGGAGCTGCTGAAAAGGGGGCCAGGGCAGCCAGGACTTCCCTGCTTGTaGACAGAGACAAGGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSVKTDGQELLKRGPGQPGLPCL*TETRVH Trigger: ATGGACCCTTGTCTCTGTTCACAAGCAGGGAAGTCC...TGGCTGCCCTGGCCCCCTTTTCAGCAGCTCCTGCCCATCTGTCTTCACACTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | GGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGGTGGTGGTGATGGGCTaGGGACTTCCCATGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GMSPTHIAYSVAVCPGIRVVVMG*GLPMGP Trigger: GGGCCCCATGGGAAGTCCCCAGCCCATCACCACCAC...CCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CAA 90 bp | GGAGGACATGGTGGGGCTCTCTCTCTACCTCCCCAAATGGTCACATaGGCCTTACTCAGCAGTATGGAGCTAGGCCTGGGAACAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GGHGGALSLPPQMVT*ALLSSMELGLGTVS Trigger: GCTCACTGTTCCCAGGCCTAGCTCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCCCCACCATGTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | CTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGAGCTAGGCCTGAGACATGGCTGGGGATaGGAGCCAGGTGGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: LPPQMVTLALLSSMELGLRHGWG*EPGGTE Trigger: CTCAGTCCCACCTGGCTCTCATCCCCAGCCATGTCT...CAGGCCTAGCTCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTGTGAAGACAGATGGGCAGGAGCTGCTGAAAAGGGGGCCAGGGCAGCCAAAACACCTTGGGCTTTaGAGAACCCAGAGGAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LSVKTDGQELLKRGPGQPKHLGL*RTQRRC Trigger: ACACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTT...TGGCTGCCCTGGCCCCCTTTTCAGCAGCTCCTGCCCATCTGTCTTCACACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCACTCTACCTCCCCAAATaGTCACATTGGCCTTACTCA | + |
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Preference number: 2 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSLYLPK*SHWPYS Trigger: TGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAG...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCACTGGCTTGTAGTCCATaGGACTCAGTCCTTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: VTLVVAPSDLTGLDPSRALACSP*DSVLLT Trigger: GGTAAGAAGGACTGAGTCTCATGGACTACAAGCCAG...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGCCACAGTTTCTGCACACACTCTGCTCTAACATCTGTGGCCTGCCCTTTCTTCTGGCCAACTCCTaGGGCTTCTGCAGGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: WKPQFLHTLCSNICGLPFLLANS*GFCRQV Trigger: GACCTGCCTGCAGAAGCCGCAGGAGTTGGCCAGAAG...AAAGGGCAGGCCACAGATGTTAGAGCAGAGTGTGTGCAGAAACTGTGGCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTGTGAAGACAGATGGGCAGGAGCTGCTGAAAAGGGGGCCAGGGCAGCCAAAGAGTGCCAACTGCTaGCTTGTAGTCCATGAGACT | + |
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Preference number: 2 (lower is better) Translates to: LSVKTDGQELLKRGPGQPKSANC*LVVHET Trigger: AGTCTCATGGACTACAAGCCAGCAGTTGGCACTCTT...TGGCTGCCCTGGCCCCCTTTTCAGCAGCTCCTGCCCATCTGTCTTCACACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGATACCTGTCAGCTGTCTaGGCTGCTCTGCCCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGYLSAV*AALPSP Trigger: GGGACTGGGCAGAGCAGCCCAGACAGCTGACAGGTA...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGAAAGGTAGTGGAAGGCTaGGAGACATGGCTGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGKVVEG*ETWLGM Trigger: CATCCCCAGCCATGTCTCCCAGCCTTCCACTACCTT...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGAAGCAGAAGGCAGCTCTaGAGGGGAAAGGTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGSRRQL*RGKVSL Trigger: AAGGGAAACCTTTCCCCTGCAGAGCTGCCTTCTGCT...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGATGGAGATTTAGGGGCTaGGGAAGAGTAGAGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGWRFRG*GRVEVV Trigger: CACCACCTCTACTCTTCCCCAGCCCCTAAATCTCCA...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | ATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGGAAGCAGAAAGCCAGAGGGGTGTTCCTaGCTGCAGTGGAAGTTACTC | + |
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Preference number: 2 (lower is better) Translates to: IAYSVAVCPGIRHWGSRKPEGCS*LQWKLL Trigger: GAGTAACTTCCACTGCAGCCAGGAACACCCCTCTGG...CTTTCTGCTTCCCCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCACCCTCTCTGTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTACTGGGAATAAAACTTaGGGCTATACCCATAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: FPTLSVTLVVAPSDLTGLTGNKT*GYTHSP Trigger: GGGGCTATGGGTATAGCCCCAAGTTTTATTCCCAGT...AAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTACAGAGAGGGTGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGGAAGCAGAAAGGGTTTAAACCCCAGCTaGCTACACAAAGCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: IAYSVAVCPGIRHWGSRKGLNPS*LHKAGV Trigger: CACCCCAGCTTTGTGTAGGCAGCTGGGGTTTAAACC...CTTTCTGCTTCCCCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGAGCTAGGCCTGAAAAACAGAAGGGAGTaGACACGTAAGGTAGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPPQMVTLALLSSMELGLKNRRE*TRKVVE Trigger: TTCCACTACCTTACGTGTCCACTCCCTTCTGTTTTT...CAGGCCTAGCTCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGACCTGTTTTCCTCTTCTaGAAAATGGCCATAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGPVFLF*KMAIRT Trigger: AGTTCTTATGGCCATTTTTCAGAAGAGGAAAACAGG...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR TCA 72 bp | ACAGCACCTCTCCAGCTGCTGGGTTCCATTCCCCCTTaGCACAGGGGCCAGCTCCTCCACACGGACATGGGA | + |
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Preference number: 3 (lower is better) Translates to: TAPLQLLGSIPP*HRGQLLHTDMG Trigger: TCCCATGTCCGTGTGGAGGAGCTGGCCCCTGTGTCAAGGGGGAATGGAACCCAGCAGCTGGAGAGGTGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCACTGAAGAAAGAGCACTaGGGCTGGGAACAAGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSLKKEH*GWEQAG Trigger: GCCGGCTTGTTCCCAGCCCAAGTGCTCTTTCTTCAG...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR TCA 72 bp | AACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTaGCCCCTCGAGGGCAGGGTCACACACAGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: NFGCGSLGSDGT*PLEGRVTHRTE Trigger: CTCTGTCCTGTGTGTGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR GCA 72 bp | CCAGCCCAACATAAACACAGACAGCACCTCTCCAGCTaGTGGGTTCCATTCCCCCTTGACACAGGGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PAQHKHRQHLSS*WVPFPLDTGAS Trigger: GCTGGCCCCTGTGTCAAGGGGGAATGGAACCCAGCAGCTGGAGAGGTGCTGTCTGTGTTTATGTTGGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 72 bp | TCTCAGGAGCCCCTGAGAATGTTCCCAGACTCCAGGTaGCTCACCTACAGATGTCCACCCCGCAGAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: SQEPLRMFPDSR*LTYRCPPRRGG Trigger: TCCACCTCTGCGGGGTGGACATCTGTAGGTGAGCCACCTGGAGTCTGGGAACATTCTCAGGGGCTCCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 72 bp | GAGGGCAGGCTGAGCCTGAAGAAAGAGCACTTGGGCTaGGAACAAGCCGGCAGGCTGTTCCCCTTCAAGACA | + |
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Preference number: 3 (lower is better) Translates to: EGRLSLKKEHLG*EQAGRLFPFKT Trigger: TGTCTTGAAGGGGAACAGCCTGCCGGCTTGTTCCCAGCCCAAGTGCTCTTTCTTCAGGCTCAGCCTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 72 bp | GCCCAACATAAACACAGACAGCACCTCTCCAGCTGCTaGGTTCCATTCCCCCTTGACACAGGGGCCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: AQHKHRQHLSSC*VPFPLDTGASS Trigger: GGAGCTGGCCCCTGTGTCAAGGGGGAATGGAACCCAGCAGCTGGAGAGGTGCTGTCTGTGTTTATGTTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 72 bp | AACAGAAGGGAGTGGACACGTAAGGTAGTGGAAGGCTaGGAGACATGGCTGGGGATGAGAGCCAGGTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: NRREWTRKVVEG*ETWLGMRARWD Trigger: GTCCCACCTGGCTCTCATCCCCAGCCATGTCTCCCAGCCTTCCACTACCTTACGTGTCCACTCCCTTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR CCA 72 bp | GCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTaGGGAAGCAGAAAGGCTGCCTGCATGGGAGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: AYSVAVCPGIRH*GSRKAACMGGG Trigger: ACCCCCTCCCATGCAGGCAGCCTTTCTGCTTCCCCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR GCA 72 bp | AGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTaGACACACTCTGCTCTAACATCTGTGGCCTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: RCPPRRGGSHSF*THSALTSVACP Trigger: AGGGCAGGCCACAGATGTTAGAGCAGAGTGTGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR GCA 72 bp | GTCCCAGGATATACCTGTCAGCTGTCTGGGCTGCTCTaGCCAGTCCCTGAACTCTCAAGAGTGCCAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: VPGYTCQLSGLL*PVPELSRVPTA Trigger: AGCAGTTGGCACTCTTGAGAGTTCAGGGACTGGGCAGAGCAGCCCAGACAGCTGACAGGTATATCCTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| 3UTR GCA 72 bp | TGCCCGGGTGGGTGTGGGGATGTCACCCACACATATTaGATATTCTGTGGCAGTGTGCCCAGGCATAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CPGGCGDVTHTY*IFCGSVPRHKA Trigger: TGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCCCACACCCACCCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGACACAAAGCTGGGGTGTaGCCTGCAGGGGCTTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGHKAGV*PAGASL Trigger: AAGCGAAGCCCCTGCAGGCAACACCCCAGCTTTGTG...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR GCA 72 bp | GAGCTAGGCCTGGGAACAGTGAGCAGAAGGCAGCTCTaGAGGGGAAAGGTTTCCCTTTTCATGGTACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ELGLGTVSRRQL*RGKVSLFMVLG Trigger: TCCCAGTACCATGAAAAGGGAAACCTTTCCCCTGCAGAGCTGCCTTCTGCTCACTGTTCCCAGGCCTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGGGTGTGGGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCTGGACAAAAACACCTaGGGCTTTGGAGAACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GWVWGCHPHILHILWQCALDKNT*GFGEPR Trigger: TCTGGGTTCTCCAAAGCCCAAGGTGTTTTTGTCCAG...GGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCCCACACCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CCA 72 bp | GTCCATGTTTTAGATTCCAAGGGCAGTCCTGAAGGCTaGAGTCTCTCAGGAGCCCCTGAGAATGTTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VHVLDSKGSPEG*SLSGAPENVPR Trigger: TCTGGGAACATTCTCAGGGGCTCCTGAGAGACTCCAGCCTTCAGGACTGCCCTTGGAATCTAAAACATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGAAAACACCTTGGGCTTaGGAGAACCCAGAGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GMSPTHIAYSVAVCPGIRKTPWA*ENPEEV Trigger: CACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTTT...CCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR GCA 72 bp | ACCTGTTTTCCTCTTCTGAAAAATGGCCATAAGAACTaGCCAGGTGACTTAACTAGAGTGTTATTACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: TCFPLLKNGHKN*PGDLTRVLLHS Trigger: TGAGTGTAATAACACTCTAGTTAAGTCACCTGGGCAGTTCTTATGGCCATTTTTCAGAAGAGGAAAACAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCAACAGCCTGGCCGTTGTaGGTGAGCAGGGCGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSTAWPL*VSRARC Trigger: GCACCGCGCCCTGCTCACGCACAACGGCCAGGCTGT...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | CTTAGGGGCTGCCCGGGTGGGTGTGGGGATGTCACCCACACATATTGCATATTCCCTGGCCGTTGTGCGTaGGCAGGGCGCGGTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRGCPGGCGDVTHTYCIFPGRCA*AGRGAP Trigger: CGGAGCACCGCGCCCTGCTCACGCACAACGGCCAGG...GAATATGCAATATGTGTGGGTGACATCCCCACACCCACCCGGGCAGCCCCTAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCACGGCTCCGACTCCAGTaGGTCGAACACCGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLVVAPSDLTGLDPSRARLRLQ*VEHRGA Trigger: GGCGCCGCGGTGTTCGACGCACTGGAGTCGGAGCCG...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGTGAAGACAGATGGGCAGGAGCTGCTGAAAAGGGGGCCAGGGCAGCCATGCACGCCGGCCTTGTaGGGCTTGAGGCGCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LSVKTDGQELLKRGPGQPCTPAL*GLRRST Trigger: CGTGCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCA...TGGCTGCCCTGGCCCCCTTTTCAGCAGCTCCTGCCCATCTGTCTTCACACTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CAA 72 bp | GACAGCACCTCTCCAGCTGCTGGGTTCCATTCCCCCTaGACACAGGGGCCAGCTCCTCCACACGGACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSTSPAAGFHSP*TQGPAPPHGHG Trigger: CCCATGTCCGTGTGGAGGAGCTGGCCCCTGTGTCAAGGGGGAATGGAACCCAGCAGCTGGAGAGGTGCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGAGCCCCGCCTCCTGCTGGCTAGTGATAGCCTGCACAGTTGGAGATTTGCACAGGCAGGGGTGTaGGGGCGTGTCGCTGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSEPRLLLASDSLHSWRFAQAGV*GRVAVA Trigger: CGCTACAGCGACACGCCCTCACACCCCTGCCTGTGC...AAATCTCCAACTGTGCAGGCTATCACTAGCCAGCAGGAGGCGGGGCTCTGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | AGTGGGGGTGACCTGGACAAAAACACCTTGGGCTTTGGAGAACCCAGAGGAGGTCCGTGGACACCGAGCTaGTGGCCGAGCGCTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGGDLDKNTLGFGEPRGGPWTPS*WPSAAS Trigger: GGACGCAGCGCTCGGCCATCAGCTCGGTGTCCACGG...ACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTTTTGTCCAGGTCACCCCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAGGGTCAGTAGGAGAAGGCAGCTaGGCCGATGCACAGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVVAPSDLTGLDPSRAGSVGEGS*ADAQRA Trigger: AGCACGCTGTGCATCGGCGCAGCTGCCTTCTCCTAC...TGACCCTGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGGCATAAGGCATTGGGGAAGCAGAAAGGCTGCCTGCATGGGAGGGGGTTGCGTCTGCAGCGCCTaGTCCTTCTGCAGCGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CPGIRHWGSRKAACMGGGCVCSA*SFCSAT Trigger: TGTGGCGCTGCAGAAGGACCAGGCGCTGCAGACGCA...ACCCCCTCCCATGCAGGCAGCCTTTCTGCTTCCCCAATGCCTTATGCCTGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCCACAGTTTCTGCACACACTCTGCTCTAACATCTGTGGCCTGCCCTTTGCCCGCAGCTCCAGCTaGCGCAGCTCCAGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WKPQFLHTLCSNICGLPFARSSS*RSSSRC Trigger: GCAGCGGCTGGAGCTGCGGCAGCTGGAGCTGCGGGC...AAAGGGCAGGCCACAGATGTTAGAGCAGAGTGTGTGCAGAAACTGTGGCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGACCGGCGAAGCGCCACTaGACGCCGGCCTTGTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGPAKRH*TPALCG Trigger: GCCGCACAAGGCCGGCGTGCAGTGGCGCTTCGCCGG...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCACCCTCTCTGTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTATGGACACCTCGGCGTaGCGCATGCCCAGCCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPTLSVTLVVAPSDLTGLMDTSA*RMPSPL Trigger: GAGGGGGCTGGGCATGCGGCACGCCGAGGTGTCCAT...AAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTACAGAGAGGGTGGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACACACTCTGATGGCCGAGCGCTaGGTCCCGCTGCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPTDVHPAEVEATVSAHTLMAER*VPLHRQ Trigger: CTGCCTGTGCAGCGGGACGCAGCGCTCGGCCATCAG...AGTGTGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CAA 72 bp | GCTTCTGAGGGCAGGCTGAGCCTGAAGAAAGAGCACTaGGGCTGGGAACAAGCCGGCAGGCTGTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASEGRLSLKKEH*GWEQAGRLFPF Trigger: GAAGGGGAACAGCCTGCCGGCTTGTTCCCAGCCCAAGTGCTCTTTCTTCAGGCTCAGCCTGCCCTCAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCTCTCTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGACGTAGCCGCCCTCGCTaGGGTTGTAGCGCGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLSTSPNGHIGLTQQYGRSRPR*GCSAPA Trigger: TGCGGGCGCGCTACAACCTCAGCGAGGGCGGCTACG...TCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | TCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACACACTAGCTCCTGCGCTTCATaGGGCCGCGGAAGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPTDVHPAEVEATVSAHTSSCAS*GRGRQP Trigger: TGGCTGCCTTCCGCGGCCTCATGAAGCGCAGGAGCT...AGTGTGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | ACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACACACTCTGCTCCTGAAGGCCACATACTaGGGCTGCGTCTGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDVHPAEVEATVSAHTLLLKATY*GCVCSA Trigger: GGCGCTGCAGACGCAGCCGCAGTATGTGGCCTTCAG...GAGCAGAGTGTGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CAA 72 bp | GGCCACTCTGCTGCCTTCCCCACCCTCTCTGTAACTTaGGTTGTGGCTCCCTCGGATCTGACGGGACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHSAAFPTLSVT*VVAPSDLTGLD Trigger: GTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTACAGAGAGGGTGGGGAAGGCAGCAGAGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | CATTTATCCTGGCTTCTAGGCCAGGGAAAACGTCCCAGGATATACCTGTCAGCTCGGCCTTGTGCGGCTTaGGGCGCAGCACGACGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSWLLGQGKRPRIYLSARPCAA*GAARRA Trigger: AGCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCG...AGCTGACAGGTATATCCTGGGACGTTTTCCCTGGCCTAGAAGCCAGGATAAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TGGCTCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACAACATGCAGAACACCTTaGCTCCGTCCGTGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLTYRCPPRRGGSHSFCTTCRTP*LRPCWA Trigger: CGCCCAGCACGGACGGAGGCAAGGTGTTCTGCATGT...TGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTGTGGGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCTACTGCGGCTGCGTCTaGAGCGCCTGGTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWVWGCHPHILHILWQCAYCGCV*SAWSFC Trigger: GCAGAAGGACCAGGCGCTGCAGACGCAGCCGCAGTA...GGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCCCACACCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGGTGACCTGGACAAAAACACCTTGGGCTTTGGAGAACCCAGAGGAGGTGCACCATGTTGGCCATaGACACCTCGGCGTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGDLDKNTLGFGEPRGGAPCWP*TPRRAA Trigger: TGCGGCACGCCGAGGTGTCCATGGCCAACATGGTGC...ACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTTTTGTCCAGGTCACCCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGTCTCTGGGCTAAAGAGTACCAGAGGCAGAGCCCTGGCAGTGGCTCAGAGAGGCACGAGCACATaGACTGGAAGTGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVSGLKSTRGRALAVAQRGTST*TGSAAP Trigger: AGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTCT...CTGAGCCACTGCCAGGGCTCTGCCTCTGGTACTCTTTAGCCCAGAGACTGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | AGAGCCTCAGTCTCTGGGCTAAAGAGTACCAGAGGCAGAGCCCTGGCAGTGGCTACGACACGAAACCGATaGGCACCATGTTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RASVSGLKSTRGRALAVATTRNR*APCWPW Trigger: CCATGGCCAACATGGTGCTCATCGGTTTCGTGTCGT...AGCCACTGCCAGGGCTCTGCCTCTGGTACTCTTTAGCCCAGAGACTGAGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | GGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGGGCGACGAGTGGCTGTaGTCCACGCAGGTGTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMSPTHIAYSVAVCPGIRGDEWL*STQVSD Trigger: GTCCGACACCTGCGTGGAGCACAGCCACTCGTCGCC...CCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR CCA 90 bp | ATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGGAAGCAGAAAGCCTCCCGGCGACGAGTaGCTGTGCTCCACGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IAYSVAVCPGIRHWGSRKPPGDE*LCSTQV Trigger: CACCTGCGTGGAGCACAGCCACTCGTCGCCGGGAGG...CTTTCTGCTTCCCCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | TCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACACACTCGATGCACAGCGTGCTaGTGCACGACACGAAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTDVHPAEVEATVSAHTRCTAC*CTTRNR Trigger: TCGGTTTCGTGTCGTGCATCAGCACGCTGTGCATCG...AGTGTGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGGGTGTGGGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCGGCGTTCATGGTCATaGATCGCAGCACCACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWVWGCHPHILHILWQCARRSWS*IAAPRG Trigger: ACCTCGTGGTGCTGCGATTCATGACCATGAACGCCG...GGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCCCACACCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | TGGCTCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACAATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLTYRCPPRRGGSHSFCTMGMEY*SFSRLL Trigger: CAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCAT...TGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CAA 72 bp | ACATACCCTTCTGTTGTCCTGGTTTCCACCTCCAGCTaGTCCCCAGTAGCAAGCCACCCTCCACTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TYPSVVLVSTSS*SPVASHPPLGC Trigger: GCAACCCAGTGGAGGGTGGCTTGCTACTGGGGACAAGCTGGAGGTGGAAACCAGGACAACAGAAGGGTATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CAA 72 bp | GGTGGGGCTCTCTCTCTACCTCCCCAAATGGTCACATaGGCCTTACTCAGCAGTATGGAGCTAGGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGALSLPPQMVT*ALLSSMELGLG Trigger: TCCCAGGCCTAGCTCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAGAGAGAGAGCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR GCA 90 bp | GGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCCCCTCTTGGCACGGTaGAGCAGGTACCTCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMSPTHIAYSVAVCPGIRPLLAR*SRYLTK Trigger: CTTCGTGAGGTACCTGCTGCACCGTGCCAAGAGGGG...CCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCCACAGTTTCTGCACACACTCTGCTCTAACATCTGTGGCCTGCCCTTTCACGAGCACATGGACTaGAAGTGCAGCACCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKPQFLHTLCSNICGLPFHEHMD*KCSTSA Trigger: TGCCGAGGTGCTGCACTTCCAGTCCATGTGCTCGTG...AAAGGGCAGGCCACAGATGTTAGAGCAGAGTGTGTGCAGAAACTGTGGCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| 3UTR CAA 72 bp | GTGGGACTGAGTGGGGGTGACCTGGACAAAAACACCTaGGGCTTTGGAGAACCCAGAGGAGGTGTAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGLSGGDLDKNT*GFGEPRGGVSR Trigger: TCTACTTACACCTCCTCTGGGTTCTCCAAAGCCCAAGGTGTTTTTGTCCAGGTCACCCCCACTCAGTCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | GGGATGTCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGGGATGTACACGAAGCTaGAGGCCACATACTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMSPTHIAYSVAVCPGIRGCTRS*RPHTAA Trigger: AGCCGCAGTATGTGGCCTTCAGCTTCGTGTACATCC...CCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | ATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGGAAGCAGAAAGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IAYSVAVCPGIRHWGSRKRGPAG*SWGWST Trigger: AGTACTCCATCCCCATGATCATCCCGCGGGACCTCT...CTTTCTGCTTCCCCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR CCA 90 bp | CTACCTCCCCAAATGGTCACATTGGCCTTACTCAGCAGTATGGAGCTAGGCCTGCGTTCACCCAGGCTCTaGAACATGACTAGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPQMVTLALLSSMELGLRSPRL*NMTSVS Trigger: GCTCACACTAGTCATGTTCCAGAGCCTGGGTGAACG...CAGGCCTAGCTCCATACTGCTGAGTAAGGCCAATGTGACCATTTGGGGAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS-3UTR TCA 90 bp | CATTTATCCTGGCTTCTAGGCCAGGGAAAACGTCCCAGGATATACCTGTCAGCTACCTCACGAAGGTGTTaGTGCGTTCACCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSWLLGQGKRPRIYLSATSRRC*CVHPGS Trigger: AGAGCCTGGGTGAACGCATCAACACCTTCGTGAGGT...AGCTGACAGGTATATCCTGGGACGTTTTCCCTGGCCTAGAAGCCAGGATAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS TCA 90 bp | CGAGCTGATGGCCGAGCGCTGCGTCCCGCTGCACAGGCAGGGGTGTaGGGGCGTGTCGCTGTAGCGGCCGCCGCCTCCCGGCGACGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RADGRALRPAAQAGV*GRVAVAAAASRRRV Trigger: CACTCGTCGCCGGGAGGCGGCGGCCGCTACAGCGACACGCCCTCACACCCCTGCCTGTGCAGCGGGACGCAGCGCTCGGCCATCAGCTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
||
| CDS TCA 90 bp | GGCCGCGGAAGGCAGCCAGGCTGTGCAGGCCCGTGGACACCGAGCTaGTGGCCGAGCGCTGCGTCCCGCTGCACAGGCAGGGGTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GRGRQPGCAGPWTPS*WPSAASRCTGRGVR Trigger: CCTCACACCCCTGCCTGTGCAGCGGGACGCAGCGCTCGGCCATCAGCTCGGTGTCCACGGGCCTGCACAGCCTGGCTGCCTTCCGCGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 90 bp | TGGACTGGAAGTGCAGCACCTCGGCATAGACGTTGCGGAAGCCGCTaGCACCGACGCCCACGCCCACGCCTCCCGCGGCCGCAGCGCATG | + |
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Preference number: 5 (lower is better) Translates to: WTGSAAPRHRRCGSR*HRRPRPRLPRPQRM Trigger: CATGCGCTGCGGCCGCGGGAGGCGTGGGCGTGGGCGTCGGTGGCAGCGGCTTCCGCAACGTCTATGCCGAGGTGCTGCACTTCCAGTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 90 bp | GGCACGAGCACATGGACTGGAAGTGCAGCACCTCGGCATAGACGTTaGGGAAGCCGCTGCCACCGACGCCCACGCCCACGCCTCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: GTSTWTGSAAPRHRR*GSRCHRRPRPRLPR Trigger: CCGCGGGAGGCGTGGGCGTGGGCGTCGGTGGCAGCGGCTTCCGCAACGTCTATGCCGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 90 bp | CCACCCAGGCCGACAGCCTGGCCGTTGTGCGTGAGCAGGGCGCGGTaGTCCGCATCACGCTTCTCGTCCTCGGCGTTCATGGTCATGAAT | + |
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Preference number: 5 (lower is better) Translates to: PPRPTAWPLCVSRAR*SASRFSSSAFMVMN Trigger: ATTCATGACCATGAACGCCGAGGACGAGAAGCGTGATGCGGAGCACCGCGCCCTGCTCACGCACAACGGCCAGGCTGTCGGCCTGGGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCACCGGCCTTGTGCGGCTaGAGGCGCAGCACGACGCGC | + |
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Preference number: 5 (lower is better) Translates to: VTLVVAPSDLTGLDPSRAPALCG*RRSTTR Trigger: GCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCGG...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 90 bp | GACACGAAACCGATGAGCACCATGTTGGCCATGGACACCTCGGCGTaGCGCATGCCCAGCCCCCTCTTGGCACGGTGCAGCAGGTACCTC | + |
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Preference number: 5 (lower is better) Translates to: DTKPMSTMLAMDTSA*RMPSPLLARCSRYL Trigger: GAGGTACCTGCTGCACCGTGCCAAGAGGGGGCTGGGCATGCGGCACGCCGAGGTGTCCATGGCCAACATGGTGCTCATCGGTTTCGTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS TCA 90 bp | GGCTGTGCTCCACGCAGGTGTCGGACGTGGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACTGCAGCTTCTCGCGGCTCTTGTACC | + |
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Preference number: 5 (lower is better) Translates to: GCAPRRCRTWRGPAG*SWGWSTAASRGSCT Trigger: GGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTCCACGTCCGACACCTGCGTGGAGCACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | TCACCTACAGATGTCCACCCCGCAGAGGTGGAAGCCACAGTTTCTGCACACACTCACTGCACGCCGGCCTaGTGCGGCTTGAGGCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SPTDVHPAEVEATVSAHTHCTPA*CGLRRS Trigger: GCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCAGTG...AGTGTGTGCAGAAACTGTGGCTTCCACCTCTGCGGGGTGGACATCTGTAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 90 bp | TCGGACGTGGAGAGGTCCCGCGGGATGATCATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTGTACCAGAGGCACGAGCACATGGAC | + |
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Preference number: 5 (lower is better) Translates to: SDVERSRGMIMGMEY*SFSRLLYQRHEHMD Trigger: GTCCATGTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTCCACGTCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS CCA 90 bp | AGTACTGCAGCTTCTCGCGGCTCTTGTACCAGAGGCACGAGCACATaGACTGGAAGTGCAGCACCTCGGCATAGACGTTGCGGAAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: STAASRGSCTRGTST*TGSAAPRHRRCGSR Trigger: GCGGCTTCCGCAACGTCTATGCCGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCTGCAGTACT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | GTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTGACCCCTCGAGGGCAAACATGCAGAACACCTaGCCTCCGTCCGTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VTLVVAPSDLTGLDPSRANMQNT*PPSVLG Trigger: GCCCAGCACGGACGGAGGCAAGGTGTTCTGCATGTT...TGCCCTCGAGGGGTCAAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | TCTCAGGAGCCCCTGAGAATGTTCCCAGACTCCAGGTGGCTCACCTACAGATGTATGCCCAGCCCCCTCTaGGCACGGTGCAGCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: SQEPLRMFPDSRWLTYRCMPSPL*ARCSRY Trigger: GTACCTGCTGCACCGTGCCAAGAGGGGGCTGGGCAT...ACATCTGTAGGTGAGCCACCTGGAGTCTGGGAACATTCTCAGGGGCTCCTGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | CTTAGGGGCTGCCCGGGTGGGTGTGGGGATGTCACCCACACATATTGCATATTCCCGATGAGCACCATGTaGGCCATGGACACCTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: LRGCPGGCGDVTHTYCIFPMSTM*AMDTSA Trigger: CGCCGAGGTGTCCATGGCCAACATGGTGCTCATCGG...GAATATGCAATATGTGTGGGTGACATCCCCACACCCACCCGGGCAGCCCCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | GCCTGCAGGGGCTTCGCTTCTGAGGGCAGGCTGAGCCTGAAGAAAGAGCACTTGTACCTCACGAAGGTGTaGATGCGTTCACCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ACRGFASEGRLSLKKEHLYLTKV*MRSPRL Trigger: GAGCCTGGGTGAACGCATCAACACCTTCGTGAGGTA...CAAGTGCTCTTTCTTCAGGCTCAGCCTGCCCTCAGAAGCGAAGCCCCTGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS-3UTR CAA 90 bp | TTCCCCACCCTCTCTGTAACTTTGGTTGTGGCTCCCTCGGATCTGACGGGACTTAGCTTCTCGCGGCTCTaGTACCAGAGGCACGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: FPTLSVTLVVAPSDLTGLSFSRL*YQRHEH Trigger: GTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCT...AAGTCCCGTCAGATCCGAGGGAGCCACAACCAAAGTTACAGAGAGGGTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS TCA 72 bp | GGCCGAGCGCTGCGTCCCGCTGCACAGGCAGGGGTGTaGGGGCGTGTCGCTGTAGCGGCCGCCGCCTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GRALRPAAQAGV*GRVAVAAAASR Trigger: CCGGGAGGCGGCGGCCGCTACAGCGACACGCCCTCACACCCCTGCCTGTGCAGCGGGACGCAGCGCTCGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 72 bp | AGTGCAGCACCTCGGCATAGACGTTGCGGAAGCCGCTaGCACCGACGCCCACGCCCACGCCTCCCGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SAAPRHRRCGSR*HRRPRPRLPRP Trigger: CGGCCGCGGGAGGCGTGGGCGTGGGCGTCGGTGGCAGCGGCTTCCGCAACGTCTATGCCGAGGTGCTGCACT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS TCA 72 bp | CGGCGAAGCGCCACTGCACGCCGGCCTTGTGCGGCTTaGGGCGCAGCACGACGCGCTCCAGCTCCTCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RRSATARRPCAA*GAARRAPAPRS Trigger: GCTACGAGGAGCTGGAGCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCAGTGGCGCTTCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS TCA 72 bp | AGGCAGCCAGGCTGTGCAGGCCCGTGGACACCGAGCTaGTGGCCGAGCGCTGCGTCCCGCTGCACAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RQPGCAGPWTPS*WPSAASRCTGR Trigger: CCTGCCTGTGCAGCGGGACGCAGCGCTCGGCCATCAGCTCGGTGTCCACGGGCCTGCACAGCCTGGCTGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 72 bp | CCGATGAGCACCATGTTGGCCATGGACACCTCGGCGTaGCGCATGCCCAGCCCCCTCTTGGCACGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PMSTMLAMDTSA*RMPSPLLARCS Trigger: GCTGCACCGTGCCAAGAGGGGGCTGGGCATGCGGCACGCCGAGGTGTCCATGGCCAACATGGTGCTCATCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 72 bp | CCGACAGCCTGGCCGTTGTGCGTGAGCAGGGCGCGGTaGTCCGCATCACGCTTCTCGTCCTCGGCGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: PTAWPLCVSRAR*SASRFSSSAFM Trigger: CATGAACGCCGAGGACGAGAAGCGTGATGCGGAGCACCGCGCCCTGCTCACGCACAACGGCCAGGCTGTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 72 bp | ACATGGACTGGAAGTGCAGCACCTCGGCATAGACGTTaGGGAAGCCGCTGCCACCGACGCCCACGCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: TWTGSAAPRHRR*GSRCHRRPRPR Trigger: GCGTGGGCGTGGGCGTCGGTGGCAGCGGCTTCCGCAACGTCTATGCCGAGGTGCTGCACTTCCAGTCCATGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS TCA 72 bp | CCACGCAGGTGTCGGACGTGGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACTGCAGCTTCTCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PRRCRTWRGPAG*SWGWSTAASRG Trigger: GCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTCCACGTCCGACACCTGCGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS CAA 72 bp | GTGCTGATGCACGACACGAAACCGATGAGCACCATGTaGGCCATGGACACCTCGGCGTGCCGCATGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLMHDTKPMSTM*AMDTSACRMPS Trigger: GCTGGGCATGCGGCACGCCGAGGTGTCCATGGCCAACATGGTGCTCATCGGTTTCGTGTCGTGCATCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS GCA 72 bp | GAGAGGTCCCGCGGGATGATCATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTGTACCAGAGGCACGAG | + |
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Preference number: 6 (lower is better) Translates to: ERSRGMIMGMEY*SFSRLLYQRHE Trigger: CTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS CAA 90 bp | CGCGGGATGATCATGGGGATGGAGTACTGCAGCTTCTCGCGGCTCTaGTACCAGAGGCACGAGCACATGGACTGGAAGTGCAGCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: RGMIMGMEYCSFSRL*YQRHEHMDWKCSTS Trigger: CGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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| CDS CCA 72 bp | GCTTCTCGCGGCTCTTGTACCAGAGGCACGAGCACATaGACTGGAAGTGCAGCACCTCGGCATAGACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ASRGSCTRGTST*TGSAAPRHRRC Trigger: GCAACGTCTATGCCGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066295.5 |
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