Pregenerated sensors for KCNK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037624Ensembl transcript IDs: ENSMUST00000079451.13, ENSMUST00000110920.7, ENSMUST00000180044.8, ENSMUST00000192723.2, ENSMUST00000193319.6, ENSMUST00000194172.6, ENSMUST00000194402.6
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTGCCCGCCAGCTCTaGGGAGAGCTTCCGCTTCACGGATGTGGCACGCTGGAACTTGTC | + |
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Preference number: 1 (lower is better) Translates to: PPTRSQFLVVVARQL*GELPLHGCGTLELV Trigger: GACAAGTTCCAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR GCA 90 bp | TCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTaGCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACGGATGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: SQTGSSYTESVPGCG*PPALRRASASRMWH Trigger: GTGCCACATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CCA 90 bp | GTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTaGTTGTGGTTGCCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACG | + |
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Preference number: 1 (lower is better) Translates to: VRWFTDRVLLHGVSS*LWLPASSAESFRFT Trigger: CGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CCA 90 bp | TGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTaGTTGCCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACGGATGTG | + |
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Preference number: 1 (lower is better) Translates to: WFTDRVLLHGVSSWL*LPASSAESFRFTDV Trigger: CACATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CCA 90 bp | TCAGCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTGGTCAGGTaGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: SAFSKGGRTSLSLVR*FTDRVLLHGVSSWL Trigger: CAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CCA 90 bp | AGATGCTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTaGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: RCSQPSAREAGLPSR*SGGSQTGSSYTESV Trigger: AACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR GCA 90 bp | CTATGTCCTCACCAGCACAGTGTGGTGTCAGACCGTTCAGATAGATaGTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LCPHQHSVVSDRSDR*SQPSAREAGLPSRW Trigger: CCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGACACCACACTGTGCTGGTGAGGACATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR TCA 90 bp | TCCTCAGAGTGCCGCCTCGGGACAACACCCTCCCTGGATGTAAGGTaGCCAGATGGGTGTTTTCTATTTGCTTTCCCTTTGAGGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: SSECRLGTTPSLDVR*PDGCFLFAFPLRSP Trigger: TGGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCATCTGGTCACCTTACATCCAGGGAGGGTGTTGTCCCGAGGCGGCACTCTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR GCA 90 bp | TCTGCAGTGCCCGTGACGCCAGAGCTTCCATGTTGCTTCTGTGCCTaGAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SAVPVTPELPCCFCA*SWHLFLPSSHTLLP Trigger: TGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGCGTCACGGGCACTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR GCA 90 bp | CTTCTCTGCAGTGCCCGTGACGCCAGAGCTTCCATGTTGCTTCTGTaGCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCT | + |
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Preference number: 1 (lower is better) Translates to: LLCSARDARASMLLL*LQLASVSSIKPHIA Trigger: AGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGCGTCACGGGCACTGCAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR CCA 90 bp | GTGCCCGTGACGCCAGAGCTTCCATGTTGCTTCTGTGCCTGCAGTTaGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAA | + |
|
Preference number: 1 (lower is better) Translates to: VPVTPELPCCFCACS*HLFLPSSHTLLPAQ Trigger: TTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGCGTCACGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR GCA 90 bp | TCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTaGTTCCAGCACAATAAGGTATGCGGAGGGGAGGGGATAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SVPAVGICFFHQATH*FQHNKVCGGEGIGE Trigger: CTCACCTATCCCCTCCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR CCA 90 bp | GTGCCGCCTCGGGACAACACCCTCCCTGGATGTAAGGTGACCAGATaGGTGTTTTCTATTTGCTTTCCCTTTGAGGTCACCATGCACAAT | + |
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Preference number: 1 (lower is better) Translates to: VPPRDNTLPGCKVTR*VFSICFPFEVTMHN Trigger: ATTGTGCATGGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCATCTGGTCACCTTACATCCAGGGAGGGTGTTGTCCCGAGGCGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR TCA 90 bp | CTCCACCTCAGACTCTTCCAAGAGAGGGCTACTTCATGTTCTCAATaGCAGCTATGTCCTCACCAGCACAGTGTGGTGTCAGACCGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LHLRLFQERATSCSQ*QLCPHQHSVVSDRS Trigger: TGAACGGTCTGACACCACACTGTGCTGGTGAGGACATAGCTGTCATTGAGAACATGAAGTAGCCCTCTCTTGGAAGAGTCTGAGGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CCA 90 bp | CTACTTCATGTTCTCAATGACAGCTATGTCCTCACCAGCACAGTGTaGTGTCAGACCGTTCAGATAGATGCTCTCAGCCTTCAGCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: LLHVLNDSYVLTSTV*CQTVQIDALSLQQG Trigger: CCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGACACCACACTGTGCTGGTGAGGACATAGCTGTCATTGAGAACATGAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR TCA 90 bp | GAAATGTTGTCATCCCTAAGTGGTCAGTATCCAGGCTCAGTTAGGTaGACCATGAAAAACCAAGGGCTGATCCCTCCAATCTACATGACC | + |
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Preference number: 1 (lower is better) Translates to: EMLSSLSGQYPGSVR*TMKNQGLIPPIYMT Trigger: GGTCATGTAGATTGGAGGGATCAGCCCTTGGTTTTTCATGGTTCACCTAACTGAGCCTGGATACTGACCACTTAGGGATGACAACATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR CAA 90 bp | TCCACGCTCAGCCGCCTCCTCGTTTCCTTGAACTCGGCCGTGACATaGGCTGTCCACTCAGCGGCATGCGCTCTGAACTCTCCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: STLSRLLVSLNSAVT*AVHSAACALNSPTS Trigger: AGAGGTGGGAGAGTTCAGAGCGCATGCCGCTGAGTGGACAGCCAATGTCACGGCCGAGTTCAAGGAAACGAGGAGGCGGCTGAGCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CAA 90 bp | TTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTaGCCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACGGATGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FTDRVLLHGVSSWLW*PASSAESFRFTDVA Trigger: TGCCACATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR CAA 90 bp | AGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTaGTGGTTGCCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACGGAT | + |
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Preference number: 2 (lower is better) Translates to: RWFTDRVLLHGVSSW*WLPASSAESFRFTD Trigger: ATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR-3UTR CCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTAGAGGGACCCTGGGCTaGCTGGGGCTGTGCCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HDHVSPSLPQKGEISFAIRGTLG*LGLCPL Trigger: AAGGGGGCACAGCCCCAGCCAGCCCAGGGTCCCTCT...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTATGCGGAGGGGAGAGTCAGCAAAGGGTaGGCCCAGGGTGAGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: VSSIKPHIASSTIRYAEGRVSKG*AQGEGG Trigger: CCCGCCCTCACCCTGGGCTCACCCTTTGCTGACTCT...CCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCCTCCAGCCTTCTATGTaGTTGAATATGACCGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CLSITQHSADSTRHPQSALQPSM*LNMTAG Trigger: CCCTGCGGTCATATTCAAGCACATAGAAGGCTGGAG...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCGCTGGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCAGAAGCCCTTCCCTATaGCTCCACCTCAGACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLAGQVVHRQGPPTRSQFRSPSL*LHLRLF Trigger: GAAGAGTCTGAGGTGGAGCCATAGGGAAGGGCTTCT...GAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCCTCTCGCTGGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGAAGCCCTTCCCTATaGCTCCACCTCAGACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TSLSLVRWFTDRVLLHGVRSPSL*LHLRLF Trigger: GAAGAGTCTGAGGTGGAGCCATAGGGAAGGGCTTCT...GACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGGCGGGGAAGGGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCCAGGCTCAGTTAGGTaGACCATGAAAAACCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VRAGKGGTTSPPDRVLFLPGSVR*TMKNQG Trigger: CCCTTGGTTTTTCATGGTTCACCTAACTGAGCCTGG...AAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCCCTTCCCCGCCCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCTGTTGCTTCTGTGCCTaGAGTTGGCATCTGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: CLSITQHSADSTRHPQSACCFCA*SWHLFL Trigger: AAGAAACAGATGCCAACTGCAGGCACAGAAGCAACA...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCCTGACCTCCCTTCTCTaGAGTGCCCGTGACGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SFHVASVPAVGICFFHQALTSLL*SARDAR Trigger: TCTGGCGTCACGGGCACTGCAGAGAAGGGAGGTCAG...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACACTGACCTCCCTTCTCTaGAGTGCCCGTGACGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CLQLASVSSIKPHIASSTLTSLL*SARDAR Trigger: TCTGGCGTCACGGGCACTGCAGAGAAGGGAGGTCAG...TGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTGCCCGCCAGCTGGGTGTTTTCTATTTaGTTTCCCTTTGAGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: TDRVLLHGVSSWLWLPASWVFSI*FPFEVT Trigger: GGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCA...GCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGGCTACTTCATGTTCTCAATGACAGCTATGTCCTCACCAGCACAGTGTGTCCACTCAGCGGCATaGGCTCTGAACTCTCCCACC | + |
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Preference number: 2 (lower is better) Translates to: REGYFMFSMTAMSSPAQCVHSAA*ALNSPT Trigger: GGTGGGAGAGTTCAGAGCGCATGCCGCTGAGTGGAC...ACACTGTGCTGGTGAGGACATAGCTGTCATTGAGAACATGAAGTAGCCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAAGGGGAGGGGATAGGTaGGAGTCAGCAAAGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: QSFHVASVPAVGICFFHQRGGDR*ESAKGE Trigger: CTCACCCTTTGCTGACTCTCACCTATCCCCTCCCCT...TTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTAGCTCACACCCAGTCATaGCCACAGAGGGACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VGICFFHQATHCFQHNKVAHTQS*PQRDPG Trigger: CCCAGGGTCCCTCTGTGGTCATGACTGGGTGTGAGC...TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | GGTACATCCCACCATGTCAGCTTCCAGAACGGCTATTCAGGAGATGGGTGGAGCTCCATGTTGCTTCTGTaGCTGCAGTTGGCATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: GTSHHVSFQNGYSGDGWSSMLLL*LQLASV Trigger: AACAGATGCCAACTGCAGGCACAGAAGCAACATGGA...GCTCCACCCATCTCCTGAATAGCCGTTCTGGAAGCTGACATGGTGGGATGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCAAAAAGGGGGCCGTGTaGAAGCAGCCAAGGTTACCG | + |
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Preference number: 2 (lower is better) Translates to: SFHVASVPAVGICFFHQAKKGAV*KQPRLP Trigger: CGGTAACCTTGGCTGCTTCCACACGGCCCCCTTTTT...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACATCCCTGGATGTAAGGTaGCCAGATGGGTGTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TKGIRHCLSITQHSADSTSLDVR*PDGCFL Trigger: TAGAAAACACCCATCTGGTCACCTTACATCCAGGGA...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCATGCGCACGACACGTGGTCTCGCTGTTTTCTTCTCATCAGAATGAATCCCAGCACAATAAGGTATaGGGAGGGGAGGGGATAGGT | + |
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Preference number: 2 (lower is better) Translates to: SSCARHVVSLFSSHQNESQHNKV*GGEGIG Trigger: ACCTATCCCCTCCCCTCCGCATACCTTATTGTGCTG...GGATTCATTCTGATGAGAAGAAAACAGCGAGACCACGTGTCGTGCGCATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTCAGCACAATAAGGTATaGGGAGGGGAGGGGATAGGT | + |
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Preference number: 2 (lower is better) Translates to: HDHVSPSLPQKGEISFAIQHNKV*GGEGIG Trigger: ACCTATCCCCTCCCCTCCGCATACCTTATTGTGCTG...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTCCAGAGCTTCCATGTTaGTTCTGTGCCTGCAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: HDHVSPSLPQKGEISFAIPELPC*FCACSW Trigger: CCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGG...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTATGCGGAGGGGAGAAGCCCTTCCCTATaGCTCCACCTCAGACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VSSIKPHIASSTIRYAEGRSPSL*LHLRLF Trigger: GAAGAGTCTGAGGTGGAGCCATAGGGAAGGGCTTCT...CCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCATAAGATAAGGCACAAAGGCATCAGACACTaGCTGTCCATCACTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GGTTSPPDRVLFLHKIRHKGIRH*LSITQH Trigger: GTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTT...GTGCCTTATCTTATGAAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR GCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTCGGCGGTTTGCTAGATaGAGGGACTGGACTTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: HDHVSPSLPQKGEISFAIRRFAR*RDWTFS Trigger: AGAAAAAGTCCAGTCCCTGCATCTAGCAAACCGCCG...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACATTCTGTGCCTGCAGTTaGCATCTGTTTCTTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: TKGIRHCLSITQHSADSTFCACS*HLFLPS Trigger: TGATGGAAGAAACAGATGCCAACTGCAGGCACAGAA...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| 3UTR CAA 90 bp | GTGTTCAGTAGATGTAAGTACGGGCACAGAGGAAAGGGCGGCGGTTaGCTAGATGCAGGGACTGGACTTTTTCTGAATCTTGAAACATCC | + |
|
Preference number: 2 (lower is better) Translates to: VFSRCKYGHRGKGGG*LDAGTGLFLNLETS Trigger: GGATGTTTCAAGATTCAGAAAAAGTCCAGTCCCTGCATCTAGCAAACCGCCGCCCTTTCCTCTGTGCCCGTACTTACATCTACTGAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACATATTTGCTTTCCCTTTaGGGTCACCATGCACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: TKGIRHCLSITQHSADSTYLLSL*GHHAQC Trigger: ACATTGTGCATGGTGACCTCAAAGGGAAAGCAAATA...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACATCCCTGGATGTAAGGTaGCCAGATGGGTGTTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: CLQLASVSSIKPHIASSTSLDVR*PDGCFL Trigger: TAGAAAACACCCATCTGGTCACCTTACATCCAGGGA...TGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR TCA 90 bp | GCATTCAGATTCATTCATAGGCCTTATGGCACGTTAGGAGAGAGGGGGAGGGGATATTTGCTTTCCCTTTaGGGTCACCATGCACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: AFRFIHRPYGTLGERGRGYLLSL*GHHAQC Trigger: ACATTGTGCATGGTGACCTCAAAGGGAAAGCAAATA...TCCCCTCCCCCTCTCTCCTAACGTGCCATAAGGCCTATGAATGAATCTGAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTATCACATCACGTAGATTACAGATGTATGTGCTCATGTCTTCTTCTGCCTTTCAGAGGGGCCTTCTCTaGCCTCCCTTCTCTGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LITSRRLQMYVLMSSSAFQRGLL*PPFSAV Trigger: CACTGCAGAGAAGGGAGGTCAGAGAAGGCCCCTCTG...AAAGGCAGAAGAAGACATGAGCACATACATCTGTAATCTACGTGATGTGATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTACATCCCACCATGTCAGCTTCCAGAACGGCTATTCAGGAGATGGGTGGAGCTGTAAGGTGACCAGATaGGTGTTTTCTATTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GTSHHVSFQNGYSGDGWSCKVTR*VFSICF Trigger: AAAGCAAATAGAAAACACCCATCTGGTCACCTTACA...GCTCCACCCATCTCCTGAATAGCCGTTCTGGAAGCTGACATGGTGGGATGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR TCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTTATTTGCTTTCCCTTTaGGGTCACCATGCACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: HDHVSPSLPQKGEISFAIYLLSL*GHHAQC Trigger: ACATTGTGCATGGTGACCTCAAAGGGAAAGCAAATA...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCATAAGATAAGGCACTGGGTGTTTTCTATTTaGTTTCCCTTTGAGGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: GGTTSPPDRVLFLHKIRHWVFSI*FPFEVT Trigger: GGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCA...GTGCCTTATCTTATGAAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACACATCAAGCCACACATTaGTTCCAGCACAATAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: CLQLASVSSIKPHIASSTHQATH*FQHNKV Trigger: TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATG...TGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATCACATCACGTAGATTACAGATGTATGTGCTCATGTCTTCTTCTGCCTTTCCAGAGCTTCCATGTTaGTTCTGTGCCTGCAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LITSRRLQMYVLMSSSAFPELPC*FCACSW Trigger: CCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGG...AAAGGCAGAAGAAGACATGAGCACATACATCTGTAATCTACGTGATGTGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATCACATCACGTAGATTACAGATGTATGTGCTCATGTCTTCTTCTGCCTTTAAAGGCATCAGACACTaGCTGTCCATCACTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LITSRRLQMYVLMSSSAFKGIRH*LSITQH Trigger: GTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTT...AAAGGCAGAAGAAGACATGAGCACATACATCTGTAATCTACGTGATGTGATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGAGAAGCCCTTCCCTATaGCTCCACCTCAGACTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KLSELPAFSYPKQKVTRGRSPSL*LHLRLF Trigger: GAAGAGTCTGAGGTGGAGCCATAGGGAAGGGCTTCT...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGCCAGGCTCAGTTAGGTaGACCATGAAAAACCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KLSELPAFSYPKQKVTRGPGSVR*TMKNQG Trigger: CCCTTGGTTTTTCATGGTTCACCTAACTGAGCCTGG...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGCTCACCAGCACAGTGTaGTGTCAGACCGTTCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KLSELPAFSYPKQKVTRGLTSTV*CQTVQI Trigger: TATCTGAACGGTCTGACACCACACTGTGCTGGTGAG...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATCACATCACGTAGATTACAGATGTATGTGCTCATGTCTTCTTCTGCCTTTTGTTGCTTCTGTGCCTaGAGTTGGCATCTGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LITSRRLQMYVLMSSSAFCCFCA*SWHLFL Trigger: AAGAAACAGATGCCAACTGCAGGCACAGAAGCAACA...AAAGGCAGAAGAAGACATGAGCACATACATCTGTAATCTACGTGATGTGATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAAATCAGTTTTGCGATTACATGTAGAAGAATCATTTTCCTTCTGCGCTTTCCCCTCCCTCCAGTTTaGCAAGAACCACTTAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GEISFAITCRRIIFLLRFPLPPV*QEPLKK Trigger: TTTCTTAAGTGGTTCTTGCCAAACTGGAGGGAGGGG...AAAGCGCAGAAGGAAAATGATTCTTCTACATGTAATCGCAAAACTGATTTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGCCCCTCCCTCCAGTTTaGCAAGAACCACTTAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KLSELPAFSYPKQKVTRGPLPPV*QEPLKK Trigger: TTTCTTAAGTGGTTCTTGCCAAACTGGAGGGAGGGG...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATCACATCACGTAGATTACAGATGTATGTGCTCATGTCTTCTTCTGCCTTTCATCAAGCCACACATTaGTTCCAGCACAATAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LITSRRLQMYVLMSSSAFHQATH*FQHNKV Trigger: TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATG...AAAGGCAGAAGAAGACATGAGCACATACATCTGTAATCTACGTGATGTGATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGTGGGTGTTTTCTATTTaGTTTCCCTTTGAGGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: KLSELPAFSYPKQKVTRGWVFSI*FPFEVT Trigger: GGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCA...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | CGGAGTCAGTTCCTGGTTGTGGTTGCCCGCCAGCTCTaGGGAGAGCTTCCGCTTCACGGATGTGGCACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSQFLVVVARQL*GELPLHGCGTL Trigger: CAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR GCA 72 bp | GGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTaGCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSYTESVPGCG*PPALRRASASR Trigger: CCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR GCA 72 bp | TCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTaGCGCCTCGGGACAACACCCTCCCTGGATGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SALSGQHTASSE*RLGTTPSLDVR Trigger: CCTTACATCCAGGGAGGGTGTTGTCCCGAGGCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR CCA 72 bp | GACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTaGTTGCCCGCCAGCTCTGCGGAGAGCTTCCGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DRVLLHGVSSWL*LPASSAESFRF Trigger: GAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR CCA 72 bp | CCGCCAGCTCTGCGGAGAGCTTCCGCTTCACGGATGTaGCACGCTGGAACTTGTCGTAGATCTCCACGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPALRRASASRM*HAGTCRRSPRS Trigger: TGAGCGTGGAGATCTACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR CCA 72 bp | CAGCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTaGTCAGGTGGTTCACAGACAGGGTCCTCCTACACG | + |
|
Preference number: 3 (lower is better) Translates to: QPSAREAGLPSR*SGGSQTGSSYT Trigger: CGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR CCA 72 bp | TTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTaGTTGTGGTTGCCCGCCAGCTCTGCGGAGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTDRVLLHGVSS*LWLPASSAESF Trigger: GAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR CCA 72 bp | AGCAAGGGAGGCAGGACTTCCCTCTCGCTGGTCAGGTaGTTCACAGACAGGGTCCTCCTACACGGAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKGGRTSLSLVR*FTDRVLLHGVS Trigger: ACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR GCA 72 bp | CACCAGCACAGTGTGGTGTCAGACCGTTCAGATAGATaGTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HQHSVVSDRSDR*SQPSAREAGLP Trigger: GGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGACACCACACTGTGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR-3UTR CAA 90 bp | ATAGATGCTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTGGTCAGCAGCCTTCTATGTGCTaGAATATGACCGCAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IDALSLQQGRQDFPLAGQQPSMC*NMTAGR Trigger: TCTCCCTGCGGTCATATTCAAGCACATAGAAGGCTG...CTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTAACTCGGCCGTGACATaGGCTGTCCACTCAGCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HDHVSPSLPQKGEISFAINSAVT*AVHSAA Trigger: TGCCGCTGAGTGGACAGCCAATGTCACGGCCGAGTT...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | CCCGTGACGCCAGAGCTTCCATGTTGCTTCTGTGCCTaGAGTTGGCATCTGTTTCTTCCATCAAGCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PVTPELPCCFCA*SWHLFLPSSHT Trigger: TGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGCGTCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | TTCTCTGCAGTGCCCGTGACGCCAGAGCTTCCATGTTaGTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSAVPVTPELPC*FCACSWHLFLP Trigger: TGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGCGTCACGGGCACTGCAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | CTGGTCCAAGCTGACAGTGAGCCCTGTATGAGCTCATaGGCACGACACGTGGTCTCGCTGTTTTCTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVQADSEPCMSS*ARHVVSLFSSH Trigger: ATGAGAAGAAAACAGCGAGACCACGTGTCGTGCGCATGAGCTCATACAGGGCTCACTGTCAGCTTGGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGGCGGGGAAGGGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCTATTTGCTTTCCCTTaGAGGTCACCATGCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: VRAGKGGTTSPPDRVLFLLFAFP*RSPCTM Trigger: CATTGTGCATGGTGACCTCAAAGGGAAAGCAAATAG...AAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCCCTTCCCCGCCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR TCA 72 bp | CAGCAGTCTGTATCTCTCCATGTGCAAAACTCACAGTaGTCCCAAGGCCAGCATCTGTGCTCACACCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QQSVSLHVQNSQ*SQGQHLCSHPV Trigger: GACTGGGTGTGAGCACAGATGCTGGCCTTGGGATCACTGTGAGTTTTGCACATGGAGAGATACAGACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | GCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTaGTTCCAGCACAATAAGGTATGCGGAGGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AVGICFFHQATH*FQHNKVCGGEG Trigger: CCCCTCCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGGAGAGCTTCCGCTTCACGGATGTGGCACGCTGGAACTTGTCGTAGATCTCTATTTGCTTTCCCTTaGAGGTCACCATGCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LRRASASRMWHAGTCRRSLFAFP*RSPCTM Trigger: CATTGTGCATGGTGACCTCAAAGGGAAAGCAAATAG...AGATCTACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCTATATAGCTGTACCATaGGTACCCCGGTCAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLSITQHSADSTRHPQSAYIAVP*VPRSNK Trigger: TTTATTTGACCGGGGTACCAATGGTACAGCTATATA...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR CCA 72 bp | CGGGACAACACCCTCCCTGGATGTAAGGTGACCAGATaGGTGTTTTCTATTTGCTTTCCCTTTGAGGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RDNTLPGCKVTR*VFSICFPFEVT Trigger: GGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCATCTGGTCACCTTACATCCAGGGAGGGTGTTGTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR CCA 72 bp | GTTCTCAATGACAGCTATGTCCTCACCAGCACAGTGTaGTGTCAGACCGTTCAGATAGATGCTCTCAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLNDSYVLTSTV*CQTVQIDALSL Trigger: AAGGCTGAGAGCATCTATCTGAACGGTCTGACACCACACTGTGCTGGTGAGGACATAGCTGTCATTGAGAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCCTGTCTGAGATCACCTaGCAATACCAGTCTGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SFHVASVPAVGICFFHQALSEIT*QYQSEQ Trigger: CTGTTCAGACTGGTATTGCAAGGTGATCTCAGACAG...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR TCA 72 bp | TCATCCCTAAGTGGTCAGTATCCAGGCTCAGTTAGGTaGACCATGAAAAACCAAGGGCTGATCCCTCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SSLSGQYPGSVR*TMKNQGLIPPI Trigger: GATTGGAGGGATCAGCCCTTGGTTTTTCATGGTTCACCTAACTGAGCCTGGATACTGACCACTTAGGGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAACCACCAGACAGGGTCTaGTTTCTTCATAAGATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSFHVASVPAVGICFFHQPPDRV*FLHKIR Trigger: CCTTATCTTATGAAGAAACAAGACCCTGTCTGGTGG...TTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTACTTCTGTGCCTGCAGTaGGCATCTGTTTCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VGICFFHQATHCFQHNKVLLCLQ*ASVSSI Trigger: GATGGAAGAAACAGATGCCAACTGCAGGCACAGAAG...TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR TCA 72 bp | GGTGACCAGATGGGTGTTTTCTATTTGCTTTCCCTTTaGGGTCACCATGCACAATGTTTAAATGCTACCGGC | + |
|
Preference number: 3 (lower is better) Translates to: GDQMGVFYLLSL*GHHAQCLNATG Trigger: GCCGGTAGCATTTAAACATTGTGCATGGTGACCTCAAAGGGAAAGCAAATAGAAAACACCCATCTGGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | CTAATCGGCGTTTTCTCTACTGTTAGAGACGACCTATaGCAGCAGTCTGTATCTCTCCATGTGCAAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LIGVFSTVRDDL*QQSVSLHVQNS Trigger: TGAGTTTTGCACATGGAGAGATACAGACTGCTGGCATAGGTCGTCTCTAACAGTAGAGAAAACGCCGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTACTATTTGCTTTCCCTTaGAGGTCACCATGCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: VGICFFHQATHCFQHNKVLFAFP*RSPCTM Trigger: CATTGTGCATGGTGACCTCAAAGGGAAAGCAAATAG...TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCATGCGCACGACACGTGGTCTCGCTGTTTTCTTCTCATCAGAATGAATCCTTACAAAAAGAAATGTaGTCATCCCTAAGTGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSCARHVVSLFSSHQNESLQKEM*SSLSGQ Trigger: CTGACCACTTAGGGATGACAACATTTCTTTTTGTAA...GGATTCATTCTGATGAGAAGAAAACAGCGAGACCACGTGTCGTGCGCATGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACTTACAAAAAGAAATGTaGTCATCCCTAAGTGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPCCFCACSWHLFLPSSHLQKEM*SSLSGQ Trigger: CTGACCACTTAGGGATGACAACATTTCTTTTTGTAA...GTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGGCCAGAGCTTCCATGTaGCTTCTGTGCCTGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KLSELPAFSYPKQKVTRGARASM*LLCLQL Trigger: CAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGC...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR TCA 72 bp | ACGACACGTGGTCTCGCTGTTTTCTTCTCATCAGAATaGATCCATATCGACTGTCTGAGATCACCTTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TTRGLAVFFSSE*IHIDCLRSPCN Trigger: ATTGCAAGGTGATCTCAGACAGTCGATATGGATTCATTCTGATGAGAAGAAAACAGCGAGACCACGTGTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR CCA 72 bp | CATGTCAGCTTCCAGAACGGCTATTCAGGAGATGGGTaGAGCTTTCTTTGTAAAGGAACCCGACATTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HVSFQNGYSGDG*SFLCKGTRHFK Trigger: TTTAAAATGTCGGGTTCCTTTACAAAGAAAGCTCCACCCATCTCCTGAATAGCCGTTCTGGAAGCTGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR CCA 72 bp | CAAACTTTATTTGTCCTCCAGTTCACAGTTTATACGTaGTACATCCCACCATGTCAGCTTCCAGAACGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: QTLFVLQFTVYT*YIPPCQLPERL Trigger: TAGCCGTTCTGGAAGCTGACATGGTGGGATGTACCACGTATAAACTGTGAACTGGAGGACAAATAAAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR GCA 72 bp | GGGTGTTTTCTATTTGCTTTCCCTTTGAGGTCACCATaGACAATGTTTAAATGCTACCGGCAACAGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GCFLFAFPLRSP*TMFKCYRQQSQ Trigger: TTGTGACTGTTGCCGGTAGCATTTAAACATTGTGCATGGTGACCTCAAAGGGAAAGCAAATAGAAAACACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAATCAGTTTTGCGATTACATGTAGAAGAATCATTTTCCTTCTGCGCTTTCCACCAGACAGGGTCTaGTTTCTTCATAAGATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GEISFAITCRRIIFLLRFPPDRV*FLHKIR Trigger: CCTTATCTTATGAAGAAACAAGACCCTGTCTGGTGG...AAAGCGCAGAAGGAAAATGATTCTTCTACATGTAATCGCAAAACTGATTTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR TCA 72 bp | ATGAAGATGATGGTGGAGATGATACGAATCTTCGTCTaGCTAACATTCCACTTAATAAATGTGTCTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: MKMMVEMIRIFV*LTFHLINVSST Trigger: AGTGGAAGACACATTTATTAAGTGGAATGTTAGTCAGACGAAGATTCGTATCATCTCCACCATCATCTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
||
| 3UTR CAA 72 bp | AGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTaGCCCGCCAGCTCTGCGGAGAGCTTCCGCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RVLLHGVSSWLW*PASSAESFRFT Trigger: CGTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| 3UTR CAA 72 bp | ACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTaGTGGTTGCCCGCCAGCTCTGCGGAGAGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TDRVLLHGVSSW*WLPASSAESFR Trigger: GCGGAAGCTCTCCGCAGAGCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR TCA 90 bp | CCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCCTCGGCTCTGGGAAATCTCCTaGGGCTGCTCCAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSTQRTAHGILRVPPRLWEIS*GCSNAL Trigger: CAAGGCATTGGAGCAGCCTCAGGAGATTTCCCAGAG...CCGAGGCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCCTCTCGCTGGTCAGGTaGTTCACAGACAGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSALSGQHTASSECRLSLVR*FTDRVL Trigger: GAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAG...GCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR TCA 90 bp | CCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCCTCGGTTTGGAGTTCTaGGCAGCAGACTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSALSGQHTASSECRLGLEF*AADLGS Trigger: GGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAG...GCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCCTGAGGCTGCTCCAATaGCTTGAACACCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLSITQHSADSTRHPQSALRLLQ*LEHRGS Trigger: GGAGCCACGGTGTTCAAGGCATTGGAGCAGCCTCAG...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | CCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCCTCGGTTGACGCAGGCATGCTaGGCTATGAAGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLSTQRTAHGILRVPPRLTQAC*AMKVCF Trigger: GAAGCAGACCTTCATAGCCCAGCATGCCTGCGTCAA...CCGAGGCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| 3UTR CAA 72 bp | AGCCGCCTCCTCGTTTCCTTGAACTCGGCCGTGACATaGGCTGTCCACTCAGCGGCATGCGCTCTGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLVSLNSAVT*AVHSAACALNS Trigger: AGAGTTCAGAGCGCATGCCGCTGAGTGGACAGCCAATGTCACGGCCGAGTTCAAGGAAACGAGGAGGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCCATGCTCAGAACAGCTaGAAAGTAGGCCAGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSALSGQHTASSECRHAQNS*KVGQPN Trigger: GTTGGGCTGGCCTACTTTGCAGCTGTTCTGAGCATG...GCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCTTGACGCAGGCATGCTaGGCTATGAAGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSALSGQHTASSECRLTQAC*AMKVCF Trigger: GAAGCAGACCTTCATAGCCCAGCATGCCTGCGTCAA...GCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGGGCGGGGAAGGGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCTCGGTTTGGAGTTCTaGGCAGCAGACTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VRAGKGGTTSPPDRVLFLLGLEF*AADLGS Trigger: GGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAG...AAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCCCTTCCCCGCCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR GCA 90 bp | CCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCCTCGGCCCTGCGTTTATTGCTaGCACTATTTGCTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSTQRTAHGILRVPPRPCVYC*HYLLDE Trigger: CTCATCCAGCAAATAGTGGCAGCAATAAACGCAGGG...CCGAGGCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGCGACCGTTCAGATAGATaGTCTCAGCCTTCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSALSGQHTASSECRDRSDR*SQPSAR Trigger: CCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTC...GCGGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR TCA 90 bp | TGCGGAGAGCTTCCGCTTCACGGATGTGGCACGCTGGAACTTGTCGTAGATCTCCTCGGTTTGGAGTTCTaGGCAGCAGACTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: CGELPLHGCGTLELVVDLLGLEF*AADLGS Trigger: GGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAG...GAGATCTACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR TCA 90 bp | GCTACCGGCAACAGTCACAAAGAGCCTAGAGAAGCCCTTCCCTATGGCTCCACCCTCTGGGAAATCTCCTaGGGCTGCTCCAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATGNSHKEPREALPYGSTLWEIS*GCSNAL Trigger: CAAGGCATTGGAGCAGCCTCAGGAGATTTCCCAGAG...GGTGGAGCCATAGGGAAGGGCTTCTCTAGGCTCTTTGTGACTGTTGCCGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACAGCGGCATGCGCTCTaGACTCTCCCACCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKGIRHCLSITQHSADSTQRHAL*TLPPLP Trigger: AGGAAGAGGTGGGAGAGTTCAGAGCGCATGCCGCTG...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | CTGCGGAGAGCTTCCGCTTCACGGATGTGGCACGCTGGAACTTGTCGTAGATCTTCTGAGCAGCAGACTTaGGATCCAGCAAGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRASASRMWHAGTCRRSSEQQT*DPASQG Trigger: CCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGA...AGATCTACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCGGGAAGCAAGCACGGTaGGTTTTGAGGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLSITQHSADSTRHPQSAGKQAR*VLRRMR Trigger: TCTCATTCTCCTCAAAACCCACCGTGCTTGCTTCCC...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCACTCAGCGGCATGCGCTCTGAACTCTCCCACCTCTTCCTTCGTCTTCTTGACGCAGGCATGCTaGGCTATGAAGGTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVHSAACALNSPTSSFVFLTQAC*AMKVCF Trigger: GAAGCAGACCTTCATAGCCCAGCATGCCTGCGTCAA...GAAGACGAAGGAAGAGGTGGGAGAGTTCAGAGCGCATGCCGCTGAGTGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | GCTACCGGCAACAGTCACAAAGAGCCTAGAGAAGCCCTTCCCTATGGCTCCACCTCCGCTTCACGGATGTaGCACGCTGGAACTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGNSHKEPREALPYGSTSASRM*HAGTCR Trigger: ACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGA...GGTGGAGCCATAGGGAAGGGCTTCTCTAGGCTCTTTGTGACTGTTGCCGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | GGCACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCGGACTTCCCTCTCGCTaGTCAGGTGGTTCACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTKGIRHCLSITQHSADSGLPSR*SGGSQT Trigger: TGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCC...GCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR TCA 90 bp | GGTACATCCCACCATGTCAGCTTCCAGAACGGCTATTCAGGAGATGGGTGGAGCCTCTGGGAAATCTCCTaGGGCTGCTCCAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSHHVSFQNGYSGDGWSLWEIS*GCSNAL Trigger: CAAGGCATTGGAGCAGCCTCAGGAGATTTCCCAGAG...GCTCCACCCATCTCCTGAATAGCCGTTCTGGAAGCTGACATGGTGGGATGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGTCAGACCGTTCAGATAGATGCTCTCAGCCTTCAGCAAGGGAGGCAGGACTCTGGGAAATCTCCTaGGGCTGCTCCAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVSDRSDRCSQPSAREAGLWEIS*GCSNAL Trigger: CAAGGCATTGGAGCAGCCTCAGGAGATTTCCCAGAG...TCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGACACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR TCA 90 bp | GCATTCAGATTCATTCATAGGCCTTATGGCACGTTAGGAGAGAGGGGGAGGGGACAGCGGCATGCGCTCTaGACTCTCCCACCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AFRFIHRPYGTLGERGRGQRHAL*TLPPLP Trigger: AGGAAGAGGTGGGAGAGTTCAGAGCGCATGCCGCTG...TCCCCTCCCCCTCTCTCCTAACGTGCCATAAGGCCTATGAATGAATCTGAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | CACAGTGTGGTGTCAGACCGTTCAGATAGATGCTCTCAGCCTTCAGCAAGGGAGCTGAGGCTGCTCCAATaGCTTGAACACCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSVVSDRSDRCSQPSARELRLLQ*LEHRGS Trigger: GGAGCCACGGTGTTCAAGGCATTGGAGCAGCCTCAG...CTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGACACCACACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR GCA 90 bp | CTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACGTTGCCCGCCAGCTCTaGGGAGAGCTTCCGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPCCFCACSWHLFLPSSHVARQL*GELPLH Trigger: GTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAAC...GTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCTCTGGATCACAATGGTaGTCCTCTGGGAAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSITQHSADSTRHPQSASGSQW*SSGKSP Trigger: AGGAGATTTCCCAGAGGACCACCATTGTGATCCAGA...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACGGCATCCTCAGAGTGCCATGAAGGTCTGCTTCTaGATCACAATGGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSITQHSADSTRHPQSAMKVCF*ITMVVL Trigger: GAGGACCACCATTGTGATCCAGAAGCAGACCTTCAT...GGCACTCTGAGGATGCCGTGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTGCCCGCCAGCATGAAGGTCTGCTTCTaGATCACAATGGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDRVLLHGVSSWLWLPASMKVCF*ITMVVL Trigger: GAGGACCACCATTGTGATCCAGAAGCAGACCTTCAT...GCTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | GCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTGGTCAGGTGGTTCACAGACATGAAGGTCTGCTTCTaGATCACAATGGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFSKGGRTSLSLVRWFTDMKVCF*ITMVVL Trigger: GAGGACCACCATTGTGATCCAGAAGCAGACCTTCAT...GTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | CTACCGGCAACAGTCACAAAGAGCCTAGAGAAGCCCTTCCCTATGGCTCCACCTTCCGCTTCACGGATGTaGCACGCTGGAACTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPATVTKSLEKPFPMAPPSASRM*HAGTCR Trigger: ACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGA...AGGTGGAGCCATAGGGAAGGGCTTCTCTAGGCTCTTTGTGACTGTTGCCGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| 3UTR CAA 72 bp | CTTCTCTGCAGTGCCCGTGACGCCAGAGCTTCCATGTaGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSARDARASM*LLCLQLASVSS Trigger: GGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTGGCGTCACGGGCACTGCAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACTCGGTTTGGAGTTCTaGGCAGCAGACTTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TKGIRHCLSITQHSADSTLGLEF*AADLGS Trigger: GGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAG...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR TCA 90 bp | TCAGACCGTTCAGATAGATGCTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCCAGGCATGCTGGGCTATaGAGGTCTGCTTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SDRSDRCSQPSAREAGLPRHAGL*RSASGS Trigger: TGATCCAGAAGCAGACCTTCATAGCCCAGCATGCCT...GGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR TCA 90 bp | CAGACCGTTCAGATAGATGCTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCCTAGGCATGCTGGGCTATaGAGGTCTGCTTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVQIDALSLQQGRQDFPRHAGL*RSASGS Trigger: TGATCCAGAAGCAGACCTTCATAGCCCAGCATGCCT...AGGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTTTCCAAATCCTGGATaGGTTCGTCCAGCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGGSQTGSSYTESVPGCGFPNPG*VRPARW Trigger: CCACCGAGCTGGACGAACTCATCCAGGATTTGGAAA...ACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTCGCTGGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTCCCTGCGTTTATTGCTaGCACTATTTGCTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLVRWFTDRVLLHGVSPCVYC*HYLLDE Trigger: CTCATCCAGCAAATAGTGGCAGCAATAAACGCAGGG...ACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194172.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCATAAGATAAGGCACGTCCACTCAGCGGCATaGGCTCTGAACTCTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GGTTSPPDRVLFLHKIRHVHSAA*ALNSPT Trigger: GGTGGGAGAGTTCAGAGCGCATGCCGCTGAGTGGAC...GTGCCTTATCTTATGAAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | GGCACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCGACCGTTCAGATAGATaGTCTCAGCCTTCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTKGIRHCLSITQHSADSDRSDR*SQPSAR Trigger: CCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTC...GCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | CAGCACAGTGTGGTGTCAGACCGTTCAGATAGATGCTCTCAGCCTTCAGCAAGGTCTGAGCAGCAGACTTaGGATCCAGCAAGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHSVVSDRSDRCSQPSARSEQQT*DPASQG Trigger: CCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGA...CCTTGCTGAAGGCTGAGAGCATCTATCTGAACGGTCTGACACCACACTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | TTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTGGTCAGGTGGTTCACAGACAGGTCTGGATCACAATGGTaGTCCTCTGGGAAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKGGRTSLSLVRWFTDRSGSQW*SSGKSP Trigger: AGGAGATTTCCCAGAGGACCACCATTGTGATCCAGA...CCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | ACTTCCCTCTCGCTGGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCTCCACCTTCAGTTCGTaGGGAGATGTTTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLSLVRWFTDRVLLHGVSTFSS*GDVSKS Trigger: GGATTTGGAAACATCTCCCCACGAACTGAAGGTGGA...GACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACAAGGCATGCTGGGCTATaGAGGTCTGCTTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TKGIRHCLSITQHSADSTRHAGL*RSASGS Trigger: TGATCCAGAAGCAGACCTTCATAGCCCAGCATGCCT...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR GCA 90 bp | CATGTTCTCAATGACAGCTATGTCCTCACCAGCACAGTGTGGTGTCAGACCGTTCTGAGGCTGCTCCAATaGCTTGAACACCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVLNDSYVLTSTVWCQTVLRLLQ*LEHRGS Trigger: GGAGCCACGGTGTTCAAGGCATTGGAGCAGCCTCAG...AACGGTCTGACACCACACTGTGCTGGTGAGGACATAGCTGTCATTGAGAACATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR GCA 90 bp | CACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTTGCCCGCCAGAATCCCTGCGTTTATTaGTGCCACTATTTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRQGPPTRSQFLVVVARQNPCVY*CHYLLD Trigger: ATCCAGCAAATAGTGGCAGCAATAAACGCAGGGATT...CTGGCGGGCAACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | GCATTCAGATTCATTCATAGGCCTTATGGCACGTTAGGAGAGAGGGGGAGGGGATCTGAGCAGCAGACTTaGGATCCAGCAAGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFRFIHRPYGTLGERGRGSEQQT*DPASQG Trigger: CCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGA...TCCCCTCCCCCTCTCTCCTAACGTGCCATAAGGCCTATGAATGAATCTGAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTTGTGGTGGGAAGCAAGCACGGTaGGTTTTGAGGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGGSQTGSSYTESVPGCGGKQAR*VLRRMR Trigger: TCTCATTCTCCTCAAAACCCACCGTGCTTGCTTCCC...ACCACAACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTCTCGCTGGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCACCACCAGGAAAATCGTaGAGACTGTCTTCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSRWSGGSQTGSSYTESPPGKS*RLSSIS Trigger: TGAAATGGAAGACAGTCTCCACGATTTTCCTGGTGG...TGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | CTGCGGAGAGCTTCCGCTTCACGGATGTGGCACGCTGGAACTTGTCGTAGATCTGCTTCTGGATCACAATaGTGGTCCTCTGGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRASASRMWHAGTCRRSASGSQ*WSSGKS Trigger: AGATTTCCCAGAGGACCACCATTGTGATCCAGAAGC...AGATCTACGACAAGTTCCAGCGTGCCACATCCGTGAAGCGGAAGCTCTCCGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCCTCTCGCTGGTCAGGTaGTTCACAGACAGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFHVASVPAVGICFFHQALSLVR*FTDRVL Trigger: GAGGACCCTGTCTGTGAACCACCTGACCAGCGAGAG...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR TCA 90 bp | TCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTATGCGGAGGGGAGGAGGCATGCTGGGCTATaGAGGTCTGCTTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSIKPHIASSTIRYAEGRRHAGL*RSASGS Trigger: TGATCCAGAAGCAGACCTTCATAGCCCAGCATGCCT...CCTCCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | GGTACATCCCACCATGTCAGCTTCCAGAACGGCTATTCAGGAGATGGGTGGAGCTCCACCTTCAGTTCGTaGGGAGATGTTTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTSHHVSFQNGYSGDGWSSTFSS*GDVSKS Trigger: GGATTTGGAAACATCTCCCCACGAACTGAAGGTGGA...GCTCCACCCATCTCCTGAATAGCCGTTCTGGAAGCTGACATGGTGGGATGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAACCACAAGCCCACCAGACAGGGTCTTGTTTCTTCATAAGATAAGGCACGGACTTCCCTCTCGCTaGTCAGGTGGTTCACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GGTTSPPDRVLFLHKIRHGLPSR*SGGSQT Trigger: TGTCTGTGAACCACCTGACCAGCGAGAGGGAAGTCC...GTGCCTTATCTTATGAAGAAACAAGACCCTGTCTGGTGGGCTTGTGGTTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | AGCTCATGCGCACGACACGTGGTCTCGCTGTTTTCTTCTCATCAGAATGAATCCCATGCTCAGAACAGCTaGAAAGTAGGCCAGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCARHVVSLFSSHQNESHAQNS*KVGQPN Trigger: GTTGGGCTGGCCTACTTTGCAGCTGTTCTGAGCATG...GGATTCATTCTGATGAGAAGAAAACAGCGAGACCACGTGTCGTGCGCATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAATCTGAGCAGCAGACTTaGGATCCAGCAAGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSFHVASVPAVGICFFHQSEQQT*DPASQG Trigger: CCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGA...TTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | GCATTCAGATTCATTCATAGGCCTTATGGCACGTTAGGAGAGAGGGGGAGGGGAGGGAAGCAAGCACGGTaGGTTTTGAGGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFRFIHRPYGTLGERGRGGKQAR*VLRRMR Trigger: TCTCATTCTCCTCAAAACCCACCGTGCTTGCTTCCC...TCCCCTCCCCCTCTCTCCTAACGTGCCATAAGGCCTATGAATGAATCTGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | AGCTATGTCCTCACCAGCACAGTGTGGTGTCAGACCGTTCAGATAGATGCTCTCGGGAAGCAAGCACGGTaGGTTTTGAGGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYVLTSTVWCQTVQIDALGKQAR*VLRRMR Trigger: TCTCATTCTCCTCAAAACCCACCGTGCTTGCTTCCC...GAGAGCATCTATCTGAACGGTCTGACACCACACTGTGCTGGTGAGGACATAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | GTTCAGATAGATGCTCTCAGCCTTCAGCAAGGGAGGCAGGACTTCCCTCTCGCTCCACCAGGAAAATCGTaGAGACTGTCTTCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQIDALSLQQGRQDFPLAPPGKS*RLSSIS Trigger: TGAAATGGAAGACAGTCTCCACGATTTTCCTGGTGG...AGCGAGAGGGAAGTCCTGCCTCCCTTGCTGAAGGCTGAGAGCATCTATCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | CCCACCTCTTCCTTCGTCTTCTTAGAGATCACCCGTAGCCAGTCCCCAATCATGTCTGGATCACAATGGTaGTCCTCTGGGAAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSSFVFLEITRSQSPIMSGSQW*SSGKSP Trigger: AGGAGATTTCCCAGAGGACCACCATTGTGATCCAGA...CATGATTGGGGACTGGCTACGGGTGATCTCTAAGAAGACGAAGGAAGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | CCCACCTCTTCCTTCGTCTTCTTAGAGATCACCCGTAGCCAGTCCCCAATCATGGCTTCTGGATCACAATaGTGGTCCTCTGGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSSFVFLEITRSQSPIMASGSQ*WSSGKS Trigger: AGATTTCCCAGAGGACCACCATTGTGATCCAGAAGC...CATGATTGGGGACTGGCTACGGGTGATCTCTAAGAAGACGAAGGAAGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR CCA 90 bp | CCCACCTCTTCCTTCGTCTTCTTAGAGATCACCCGTAGCCAGTCCCCAATCATGTCCACCTTCAGTTCGTaGGGAGATGTTTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSSFVFLEITRSQSPIMSTFSS*GDVSKS Trigger: GGATTTGGAAACATCTCCCCACGAACTGAAGGTGGA...CATGATTGGGGACTGGCTACGGGTGATCTCTAAGAAGACGAAGGAAGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTATGCGGAGGGGAGGTGGGCTATGAAGGTCTaGTTCTGGATCACAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSIKPHIASSTIRYAEGRWAMKV*FWITMV Trigger: CACCATTGTGATCCAGAAGCAGACCTTCATAGCCCA...CCTCCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR GCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTCTCCAGCCTTCTATGTaGTTGAATATGACCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HDHVSPSLPQKGEISFAILQPSM*LNMTAG Trigger: CCCTGCGGTCATATTCAAGCACATAGAAGGCTGGAG...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACACTCCAGCCTTCTATGTaGTTGAATATGACCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLQLASVSSIKPHIASSTLQPSM*LNMTAG Trigger: CCCTGCGGTCATATTCAAGCACATAGAAGGCTGGAG...TGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACGCCAGTCCCCAATCATaGTCAGAACAGCTGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPCCFCACSWHLFLPSSHASPQS*SEQLQS Trigger: ACTTTGCAGCTGTTCTGAGCATGATTGGGGACTGGC...GTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | AGCTCATGCGCACGACACGTGGTCTCGCTGTTTTCTTCTCATCAGAATGAATCCATGAGAGCCTCGGTTTaGAGTTCTGAGCAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSCARHVVSLFSSHQNESMRASV*SSEQQT Trigger: AGTCTGCTGCTCAGAACTCCAAACCGAGGCTCTCAT...GGATTCATTCTGATGAGAAGAAAACAGCGAGACCACGTGTCGTGCGCATGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACACCACCAGGAAAATCGTaGAGACTGTCTTCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKGIRHCLSITQHSADSTPPGKS*RLSSIS Trigger: TGAAATGGAAGACAGTCTCCACGATTTTCCTGGTGG...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | GCATTCAGATTCATTCATAGGCCTTATGGCACGTTAGGAGAGAGGGGGAGGGGAGCTTCTGGATCACAATaGTGGTCCTCTGGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AFRFIHRPYGTLGERGRGASGSQ*WSSGKS Trigger: AGATTTCCCAGAGGACCACCATTGTGATCCAGAAGC...TCCCCTCCCCCTCTCTCCTAACGTGCCATAAGGCCTATGAATGAATCTGAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR CCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTCTCACCAGCACAGTGTaGTGTCAGACCGTTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: HDHVSPSLPQKGEISFAILTSTV*CQTVQI Trigger: TATCTGAACGGTCTGACACCACACTGTGCTGGTGAG...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCCCCTGCGTTTATTGCTaGCACTATTTGCTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHVASVPAVGICFFHQAPCVYC*HYLLDE Trigger: CTCATCCAGCAAATAGTGGCAGCAATAAACGCAGGG...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACAAATCCCTGCGTTTATTaGTGCCACTATTTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKGIRHCLSITQHSADSTNPCVY*CHYLLD Trigger: ATCCAGCAAATAGTGGCAGCAATAAACGCAGGGATT...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTATGCGGAGGGGTCTGGATCACAATGGTaGTCCTCTGGGAAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIKPHIASSTIRYAEGSGSQW*SSGKSP Trigger: AGGAGATTTCCCAGAGGACCACCATTGTGATCCAGA...CCCCTCCGCATACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCACACTTCATGTTCTCAATaGCAGCTATGTCCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPCCFCACSWHLFLPSSHTSCSQ*QLCPHQ Trigger: CTGGTGAGGACATAGCTGTCATTGAGAACATGAAGT...GTGGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
||
| CDS-3UTR TCA 90 bp | CATGATCACGTAAGCCCAAGCCTCCCCCAGAAGGGAGAAATCAGTTTTGCGATTACTTCATGTTCTCAATaGCAGCTATGTCCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDHVSPSLPQKGEISFAITSCSQ*QLCPHQ Trigger: CTGGTGAGGACATAGCTGTCATTGAGAACATGAAGT...AATCGCAAAACTGATTTCTCCCTTCTGGGGGAGGCTTGGGCTTACGTGATCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS-3UTR GCA 90 bp | AGTCTGAACAGTTTTCTTATCACATCACGTAGATTACAGATGTATGTGCTCATGGTTGCCCGCCAGCTCTaGGGAGAGCTTCCGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLNSFLITSRRLQMYVLMVARQL*GELPLH Trigger: GTGAAGCGGAAGCTCTCCGCAGAGCTGGCGGGCAAC...CATGAGCACATACATCTGTAATCTACGTGATGTGATAAGAAAACTGTTCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS-3UTR CCA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCCCACCAGGAAAATCGTaGAGACTGTCTTCCATTTCA | + |
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Preference number: 4 (lower is better) Translates to: SFHVASVPAVGICFFHQAPPGKS*RLSSIS Trigger: TGAAATGGAAGACAGTCTCCACGATTTTCCTGGTGG...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGCTACTTCATGTTCTCAATGACAGCTATGTCCTCACCAGCACAGTGTGATGTTTCCAAATCCTaGATGAGTTCGTCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: REGYFMFSMTAMSSPAQCDVSKS*MSSSSS Trigger: CGAGCTGGACGAACTCATCCAGGATTTGGAAACATC...ACACTGTGCTGGTGAGGACATAGCTGTCATTGAGAACATGAAGTAGCCCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| CDS-3UTR GCA 90 bp | AGTCTGAACAGTTTTCTTATCACATCACGTAGATTACAGATGTATGTGCTCATGGTCCACTCAGCGGCATaGGCTCTGAACTCTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SLNSFLITSRRLQMYVLMVHSAA*ALNSPT Trigger: GGTGGGAGAGTTCAGAGCGCATGCCGCTGAGTGGAC...CATGAGCACATACATCTGTAATCTACGTGATGTGATAAGAAAACTGTTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS-3UTR TCA 90 bp | AGTCTGAACAGTTTTCTTATCACATCACGTAGATTACAGATGTATGTGCTCATGACACCGTGGCTCCGATaGTCAGGTAGAGGACGACCA | + |
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Preference number: 4 (lower is better) Translates to: SLNSFLITSRRLQMYVLMTPWLR*SGRGRP Trigger: TGGTCGTCCTCTACCTGATCATCGGAGCCACGGTGT...CATGAGCACATACATCTGTAATCTACGTGATGTGATAAGAAAACTGTTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR GCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGCTGAGGCTGCTCCAATaGCTTGAACACCGTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KLSELPAFSYPKQKVTRGLRLLQ*LEHRGS Trigger: GGAGCCACGGTGTTCAAGGCATTGGAGCAGCCTCAG...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR CCA 90 bp | GTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTAGCTTCTGGATCACAATaGTGGTCCTCTGGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: VGICFFHQATHCFQHNKVASGSQ*WSSGKS Trigger: AGATTTCCCAGAGGACCACCATTGTGATCCAGAAGC...TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR CCA 90 bp | GTTGGCATCTGTTTCTTCCATCAAGCCACACATTGCTTCCAGCACAATAAGGTAATGAAGGTCTGCTTCTaGATCACAATGGTGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VGICFFHQATHCFQHNKVMKVCF*ITMVVL Trigger: GAGGACCACCATTGTGATCCAGAAGCAGACCTTCAT...TACCTTATTGTGCTGGAAGCAATGTGTGGCTTGATGGAAGAAACAGATGCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR GCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGGCCAGTCCCCAATCATaGTCAGAACAGCTGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: KLSELPAFSYPKQKVTRGASPQS*SEQLQS Trigger: ACTTTGCAGCTGTTCTGAGCATGATTGGGGACTGGC...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS-3UTR CCA 90 bp | GGAGAAATCAGTTTTGCGATTACATGTAGAAGAATCATTTTCCTTCTGCGCTTTCTCACCAGCACAGTGTaGTGTCAGACCGTTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: GEISFAITCRRIIFLLRFLTSTV*CQTVQI Trigger: TATCTGAACGGTCTGACACCACACTGTGCTGGTGAG...AAAGCGCAGAAGGAAAATGATTCTTCTACATGTAATCGCAAAACTGATTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS-3UTR CCA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGTCCACCTTCAGTTCGTaGGGAGATGTTTCCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: KLSELPAFSYPKQKVTRGSTFSS*GDVSKS Trigger: GGATTTGGAAACATCTCCCCACGAACTGAAGGTGGA...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR GCA 90 bp | CTTATCACATCACGTAGATTACAGATGTATGTGCTCATGTCTTCTTCTGCCTTTAATCCCTGCGTTTATTaGTGCCACTATTTGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LITSRRLQMYVLMSSSAFNPCVY*CHYLLD Trigger: ATCCAGCAAATAGTGGCAGCAATAAACGCAGGGATT...AAAGGCAGAAGAAGACATGAGCACATACATCTGTAATCTACGTGATGTGATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS-3UTR CAA 90 bp | CGCTGGTCAGGTGGTTCACAGACAGGGTCCTCCTACACGGAGTCAGTTCCTGGTGGCTGCTCCAATGCCTaGAACACCGTGGCTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: RWSGGSQTGSSYTESVPGGCSNA*NTVAPM Trigger: CATCGGAGCCACGGTGTTCAAGGCATTGGAGCAGCC...ACCAGGAACTGACTCCGTGTAGGAGGACCCTGTCTGTGAACCACCTGACCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 |
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| CDS CCA 90 bp | GGGAAGCAAGCACGGTGGGTTTTGAGGAGAATGAGAGCCTCGGTTTaGAGTTCTGAGCAGCAGACTTGGGATCCAGCAAGTCAGGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: GKQARWVLRRMRASV*SSEQQTWDPASQGP Trigger: CGGCCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAGGCTCTCATTCTCCTCAAAACCCACCGTGCTTGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS CCA 90 bp | TTGAGGAGAATGAGAGCCTCGGTTTGGAGTTCTGAGCAGCAGACTTaGGATCCAGCAAGTCAGGGGCCGCCACTCCTGCAGTATAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: LRRMRASVWSSEQQT*DPASQGPPLLQYSR Trigger: CCGGCTATACTGCAGGAGTGGCGGCCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAGGCTCTCATTCTCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193319.6 |
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| CDS CCA 90 bp | TTGAGGAGAATGAGAGCCTCGGTTTGGAGTTCTGAGCAGCAGACTTaGGATCCAGCAAGTCAGGGGCCGCCAGGTAGACGCTCCTTTTCG | + |
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Preference number: 5 (lower is better) Translates to: LRRMRASVWSSEQQT*DPASQGPPGRRSFS Trigger: CGAAAAGGAGCGTCTACCTGGCGGCCCCTGACTTGCTGGATCCCAAGTCTGCTGCTCAGAACTCCAAACCGAGGCTCTCATTCTCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180044.8 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS-3UTR CAA 90 bp | ACAAAAGGCATCAGACACTGCCTGTCCATCACTCAGCACTCAGCGGACAGCACAAACTCGGCCGTGACATaGGCTGTCCACTCAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: TKGIRHCLSITQHSADSTNSAVT*AVHSAA Trigger: TGCCGCTGAGTGGACAGCCAATGTCACGGCCGAGTT...TGTGCTGTCCGCTGAGTGCTGAGTGATGGACAGGCAGTGTCTGATGCCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS GCA 90 bp | GATCACAATGGTGGTCCTCTGGGAAATCTCCTGAGGCTGCTCCAATaGCTTGAACACCGTGGCTCCGATGATCAGGTAGAGGACGACCAC | + |
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Preference number: 5 (lower is better) Translates to: DHNGGPLGNLLRLLQ*LEHRGSDDQVEDDH Trigger: GTGGTCGTCCTCTACCTGATCATCGGAGCCACGGTGTTCAAGGCATTGGAGCAGCCTCAGGAGATTTCCCAGAGGACCACCATTGTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS-3UTR CAA 90 bp | AGCTTCCATGTTGCTTCTGTGCCTGCAGTTGGCATCTGTTTCTTCCATCAAGCCGGCTGCTCCAATGCCTaGAACACCGTGGCTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: SFHVASVPAVGICFFHQAGCSNA*NTVAPM Trigger: CATCGGAGCCACGGTGTTCAAGGCATTGGAGCAGCC...GGCTTGATGGAAGAAACAGATGCCAACTGCAGGCACAGAAGCAACATGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS-3UTR CAA 90 bp | TCCAATGGTCGTCAGAGTGATAACCACAAAATAGATAGCGTCCAGGGCGCTCCAGGCTGCTCCAATGCCTaGAACACCGTGGCTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: SNGRQSDNHKIDSVQGAPGCSNA*NTVAPM Trigger: CATCGGAGCCACGGTGTTCAAGGCATTGGAGCAGCC...TGGAGCGCCCTGGACGCTATCTATTTTGTGGTTATCACTCTGACGACCATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| CDS-3UTR CAA 90 bp | AGCTCATGCGCACGACACGTGGTCTCGCTGTTTTCTTCTCATCAGAATGAATCCAACTCGGCCGTGACATaGGCTGTCCACTCAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SSCARHVVSLFSSHQNESNSAVT*AVHSAA Trigger: TGCCGCTGAGTGGACAGCCAATGTCACGGCCGAGTT...GGATTCATTCTGATGAGAAGAAAACAGCGAGACCACGTGTCGTGCGCATGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS CCA 90 bp | TTTCCTAAGGGGATAATCCCTGCGTTTATTGCTGCCACTATTTGCTaGATGAGTTCGTCCAGCTCGGTGGAGTTGACGCAGGCATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPKGIIPAFIAATIC*MSSSSSVELTQACW Trigger: CCAGCATGCCTGCGTCAACTCCACCGAGCTGGACGAACTCATCCAGCAAATAGTGGCAGCAATAAACGCAGGGATTATCCCCTTAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS CCA 90 bp | GAATATTTTTCCACCTTCAGTTCGTGGGGAGATGTTTCCAAATCCTaGATGAGTTCGTCCAGCTCGGTGGAGTTGACGCAGGCATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: EYFSTFSSWGDVSKS*MSSSSSVELTQACW Trigger: CCAGCATGCCTGCGTCAACTCCACCGAGCTGGACGAACTCATCCAGGATTTGGAAACATCTCCCCACGAACTGAAGGTGGAAAAATATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| CDS CCA 90 bp | CAGCAAGGCATAGATGATGCAGAATATTTTTCCACCTTCAGTTCGTaGGGAGATGTTTCCAAATCCTGGATGAGTTCGTCCAGCTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: QQGIDDAEYFSTFSS*GDVSKSWMSSSSSV Trigger: CACCGAGCTGGACGAACTCATCCAGGATTTGGAAACATCTCCCCACGAACTGAAGGTGGAAAAATATTCTGCATCATCTATGCCTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAATCAGTTTTGCGATTACATGTAGAAGAATCATTTTCCTTCTGCGCTTTGGCTGCTCCAATGCCTaGAACACCGTGGCTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: GEISFAITCRRIIFLLRFGCSNA*NTVAPM Trigger: CATCGGAGCCACGGTGTTCAAGGCATTGGAGCAGCC...AAAGCGCAGAAGGAAAATGATTCTTCTACATGTAATCGCAAAACTGATTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 |
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| CDS CCA 90 bp | CAGCAAGGCATAGATGATGCAGAATATTTTTCCACCTTCAGTTCGTaGGGAGATGTTTCCAAATCCTATGGTTGTGATAACAGTACCAGC | + |
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Preference number: 5 (lower is better) Translates to: QQGIDDAEYFSTFSS*GDVSKSYGCDNSTS Trigger: GCTGGTACTGTTATCACAACCATAGGATTTGGAAACATCTCCCCACGAACTGAAGGTGGAAAAATATTCTGCATCATCTATGCCTTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS-3UTR CAA 90 bp | AAATTAAGTGAATTACCAGCCTTCTCTTATCCTAAACAAAAAGTAACTCGGGGGCAGCCTTCTATGTGCTaGAATATGACCGCAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: KLSELPAFSYPKQKVTRGQPSMC*NMTAGR Trigger: TCTCCCTGCGGTCATATTCAAGCACATAGAAGGCTG...CCCCCGAGTTACTTTTTGTTTAGGATAAGAGAAGGCTGGTAATTCACTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 |
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| CDS CCA 72 bp | TGGCCGAGTCACTCTCCACCCGGGAAGCAAGCACGGTaGGTTTTGAGGAGAATGAGAGCCTCGGTTTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: WPSHSPPGKQAR*VLRRMRASVWS Trigger: ACTCCAAACCGAGGCTCTCATTCTCCTCAAAACCCACCGTGCTTGCTTCCCGGGTGGAGAGTGACTCGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS GCA 72 bp | GGTGGTCCTCTGGGAAATCTCCTGAGGCTGCTCCAATaGCTTGAACACCGTGGCTCCGATGATCAGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: GGPLGNLLRLLQ*LEHRGSDDQVE Trigger: CTCTACCTGATCATCGGAGCCACGGTGTTCAAGGCATTGGAGCAGCCTCAGGAGATTTCCCAGAGGACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS CCA 72 bp | AGTTCGTCCAGCTCGGTGGAGTTGACGCAGGCATGCTaGGCTATGAAGGTCTGCTTCTGGATCACAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSVELTQAC*AMKVCFWITMV Trigger: CACCATTGTGATCCAGAAGCAGACCTTCATAGCCCAGCATGCCTGCGTCAACTCCACCGAGCTGGACGAACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS GCA 72 bp | ATGAGTTCGTCCAGCTCGGTGGAGTTGACGCAGGCATaGTGGGCTATGAAGGTCTGCTTCTGGATCACAATG | + |
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Preference number: 6 (lower is better) Translates to: MSSSSSVELTQA*WAMKVCFWITM Trigger: CATTGTGATCCAGAAGCAGACCTTCATAGCCCAGCATGCCTGCGTCAACTCCACCGAGCTGGACGAACTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS CCA 72 bp | TCCACCTTCAGTTCGTGGGGAGATGTTTCCAAATCCTaGATGAGTTCGTCCAGCTCGGTGGAGTTGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: STFSSWGDVSKS*MSSSSSVELTQ Trigger: CTGCGTCAACTCCACCGAGCTGGACGAACTCATCCAGGATTTGGAAACATCTCCCCACGAACTGAAGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180044.8 |
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| CDS CCA 72 bp | GGGATAATCCCTGCGTTTATTGCTGCCACTATTTGCTaGATGAGTTCGTCCAGCTCGGTGGAGTTGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: GIIPAFIAATIC*MSSSSSVELTQ Trigger: CTGCGTCAACTCCACCGAGCTGGACGAACTCATCCAGCAAATAGTGGCAGCAATAAACGCAGGGATTATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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| CDS TCA 72 bp | GAAAGCCAAAGAGGGGAATTCCCAGCAAGGCATAGATaGTGCAGAATATTTTTCCACCTTCAGTTCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ESQRGEFPARHR*CRIFFHLQFVG Trigger: CCCCACGAACTGAAGGTGGAAAAATATTCTGCATCATCTATGCCTTGCTGGGAATTCCCCTCTTTGGCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000079451.13 ENSMUST00000110920.7 ENSMUST00000180044.8 ENSMUST00000192723.2 ENSMUST00000193319.6 ENSMUST00000194172.6 ENSMUST00000194402.6 |
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