Pregenerated sensors for KCNK18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040901Ensembl transcript IDs: ENSMUST00000065204.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAGGGGCAGGGTGGATGAGGAGGAGCAGAGACTAGGGAGACTCTaGAATGAGTATGCTAATGATCACCTGAAGCTGGCTGCGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GRGRVDEEEQRLGRL*NEYANDHLKLAAKR Trigger: CCTCTTCGCAGCCAGCTTCAGGTGATCATTAGCATACTCATTTCAGAGTCTCCCTAGTCTCTGCTCCTCCTCATCCACCCTGCCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR GCA 90 bp | CTCTGCTTGGTGACGTCAGCAGCCCGGGGTAGGGCAGGTGTCAAGTaGATCCATGCAGTCATTCAGGGAAACAGGTTACCTAGATACACT | + |
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Preference number: 1 (lower is better) Translates to: LCLVTSAARGRAGVK*IHAVIQGNRLPRYT Trigger: AGTGTATCTAGGTAACCTGTTTCCCTGAATGACTGCATGGATGCACTTGACACCTGCCCTACCCCGGGCTGCTGACGTCACCAAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 90 bp | CAGCATAGCCCAGAGCTGTTGCATAGGAAAGGCAAGGCATTGTCATaGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCTGGTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: QHSPELLHRKGKALS*MKGAPSVTFLAGPA Trigger: TGCTGGACCAGCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 90 bp | TTTGCCACACCTTACCAGTATAAACAAAGCTTGAGGAATGCCAGATaGCAAAACCAGGAGCACTGGCCTGAAGGTTCACCCTGGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: FATPYQYKQSLRNAR*QNQEHWPEGSPWGT Trigger: AGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTTATACTGGTAAGGTGTGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR TCA 90 bp | TGGGTTTGCAGGGCTTTGCCACACCTTACCAGTATAAACAAAGCTTaGGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTGAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: WVCRALPHLTSINKA*GMPDGKTRSTGLKV Trigger: AACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTTATACTGGTAAGGTGTGGCAAAGCCCTGCAAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCATTCCCCCTGTGGCTCCCCTCTGCAACACCAGCCACCACTCACCCAGGAAGGGCAGGTGTCAAGTaGATCCATGCAGTCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: TAFPLWLPSATPATTHPGRAGVK*IHAVIQ Trigger: CTGAATGACTGCATGGATGCACTTGACACCTGCCCT...TCCTGGGTGAGTGGTGGCTGGTGTTGCAGAGGGGAGCCACAGGGGGAATGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACCCAGAAGGAGAAACTGAAGACCCTCCTGAGAAGCCGCTTTTGGCAACGGCCTGTGGCTCCCCTCTaGAACACCAGCCACCACTCA | + |
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Preference number: 2 (lower is better) Translates to: RTQKEKLKTLLRSRFWQRPVAPL*NTSHHS Trigger: TGAGTGGTGGCTGGTGTTGCAGAGGGGAGCCACAGG...CCGTTGCCAAAAGCGGCTTCTCAGGAGGGTCTTCAGTTTCTCCTTCTGGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGGAGCACTGGCCTGAAGGTTCACCCTGGGGCACTTTGTCTTTGCAATGGAACAACTCTGCTTGGTaGCGTCAGCAGCCCGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: NQEHWPEGSPWGTLSLQWNNSAW*RQQPGV Trigger: TACCCCGGGCTGCTGACGTCACCAAGCAGAGTTGTT...CCATTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CAA 90 bp | CTGGCTGCGAAGAGGGGAGATGGTATACAGCATAGCCCAGAGCTGTaGCATAGGAAAGGCAAGGCATTGTCATGGATGAAGGGTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LAAKRGDGIQHSPEL*HRKGKALSWMKGAP Trigger: GGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTGTATACCATCTCCCCTCTTCGCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR GCA 90 bp | AACCAGGAGCACTGGCCTGAAGGTTCACCCTGGGGCACTTTGTCTTTGCAATGGTCACCTGAAGCTGGCTaGGAAGAGGGGAGATGGTAT | + |
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Preference number: 2 (lower is better) Translates to: NQEHWPEGSPWGTLSLQWSPEAG*EEGRWY Trigger: ATACCATCTCCCCTCTTCGCAGCCAGCTTCAGGTGA...CCATTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCTTTCAAACTACCACCTCACAGCATTCCCCCTGTGGCTCCCCTCTGCAATATAAAACCAAGGTGTaGGAAGCTTGTGGGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SCFQTTTSQHSPCGSPLQYKTKV*EACGAH Trigger: GTGAGCCCCACAAGCTTCCCACACCTTGGTTTTATA...TTGCAGAGGGGAGCCACAGGGGGAATGCTGTGAGGTGGTAGTTTGAAAGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGCTTGAGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTGAAGGTCAAGCCTCGGTAGCTTaGATGGCAGATTACCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: KQSLRNARWQNQEHWPEGQASVA*MADYQG Trigger: GCCCTGGTAATCTGCCATCCAAGCTACCGAGGCTTG...ACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CAA 90 bp | GGTATACAGCATAGCCCAGAGCTGTTGCATAGGAAAGGCAAGGCATaGTCATGGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GIQHSPELLHRKGKA*SWMKGAPSVTFLAG Trigger: ACCAGCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTGTATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCCTTTTCTTGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAACAGGGTGGCAAGGCATTGTCATaGATGAAGGGTGCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HCPFLGPQKLLGDRCEQGGKALS*MKGAPS Trigger: GGAGGGAGCACCCTTCATCCATGACAATGCCTTGCC...ACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CAA 90 bp | TTGGGTTTGCAGGGCTTTGCCACACCTTACCAGTATAAACAAAGCTaGAGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LGLQGFATPYQYKQS*RNARWQNQEHWPEG Trigger: ACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTTATACTGGTAAGGTGTGGCAAAGCCCTGCAAACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CAA 90 bp | GACCTTGCCAACCAGATCTCCGTGTCATCTGTCACTGTCCTTTTCTaGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAACAGGGTATGT | + |
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Preference number: 2 (lower is better) Translates to: DLANQISVSSVTVLF*VLKSCLETDVNRVC Trigger: ACATACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTGACAGATGACACGGAGATCTGGTTGGCAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CAA 90 bp | TTCACCCTGGGGCACTTTGTCTTTGCAATGGTTCTTGCTCACACCTaGTTGATTCCAGTGCCTGAGGTAGATCTTCAAGGGTTGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FTLGHFVFAMVLAHT*LIPVPEVDLQGLEE Trigger: TTCCTCCAACCCTTGAAGATCTACCTCAGGCACTGGAATCAACAAGGTGTGAGCAAGAACCATTGCAAAGACAAAGTGCCCCAGGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CAA 90 bp | ACCCTGGGGCACTTTGTCTTTGCAATGGTTCTTGCTCACACCTTGTaGATTCCAGTGCCTGAGGTAGATCTTCAAGGGTTGGAGGAATTT | + |
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Preference number: 2 (lower is better) Translates to: TLGHFVFAMVLAHTL*IPVPEVDLQGLEEF Trigger: AAATTCCTCCAACCCTTGAAGATCTACCTCAGGCACTGGAATCAACAAGGTGTGAGCAAGAACCATTGCAAAGACAAAGTGCCCCAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGAGGATTCACTTGGTTCAGGTTTGCTTTGTGCCAATCTGGATAAATGCCCCTGAAGGTTCACCCTaGGGCACTTTGTCTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: ALRIHLVQVCFVPIWINAPEGSP*GTLSLQ Trigger: TTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGG...GGCATTTATCCAGATTGGCACAAAGCAAACCTGAACCAAGTGAATCCTCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGCTCAGGGAGACAAGATACAGCCGTGAGGTATTTCAAATAACCTTCAAACGTGACATTTCTAGCTaGTCCAGCACAGACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: CKLRETRYSREVFQITFKRDISS*SSTDPH Trigger: GTGTGGGTCTGTGCTGGACCAGCTAGAAATGTCACG...TTTGAAGGTTATTTGAAATACCTCACGGCTGTATCTTGTCTCCCTGAGCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCCTTTTCTTGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAACAGGGTTTGCCAAGACACAGGTaGAATATCTACTCCACATCA | + |
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Preference number: 2 (lower is better) Translates to: HCPFLGPQKLLGDRCEQGLPRHR*NIYSTS Trigger: TGATGTGGAGTAGATATTCCACCTGTGTCTTGGCAA...ACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAGCTTGAGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTGAAGGTATATTCTTAAAATGGTaGCTTTCAGACAGACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KQSLRNARWQNQEHWPEGIFLKW*LSDRQG Trigger: TCCCTGTCTGTCTGAAAGGCACCATTTTAAGAATAT...ACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTAATTGCAGGACTCATGTTTCTAAGCTTGCAAGCTCAGGGAGACAAGATAGAAGCTGGGGCCACTTaGGAAGATTTTAACTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLIAGLMFLSLQAQGDKIEAGAT*EDFNFP Trigger: AGGGAAGTTAAAATCTTCCCAAGTGGCCCCAGCTTC...TATCTTGTCTCCCTGAGCTTGCAAGCTTAGAAACATGAGTCCTGCAATTAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGCTCAGGGAGACAAGATACAGCCGTGAGGTATTTCAAATAACCTTCAAAAGACTAGGGAGACTCTaGAATGAGTATGCTAATGAT | + |
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Preference number: 2 (lower is better) Translates to: CKLRETRYSREVFQITFKRLGRL*NEYAND Trigger: ATCATTAGCATACTCATTTCAGAGTCTCCCTAGTCT...TTTGAAGGTTATTTGAAATACCTCACGGCTGTATCTTGTCTCCCTGAGCTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGGAGCACTGGCCTGAAGGTTCACCCTGGGGCACTTTGTCTTTGCAATGGACTCGGGGGCAGCTCTaGAGTGTCTCTACCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: NQEHWPEGSPWGTLSLQWTRGQL*SVSTWG Trigger: ACCCCAGGTAGAGACACTCAAGAGCTGCCCCCGAGT...CCATTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | CTGCTTTCAAACTACCACCTCACAGCATTCCCCCTGTaGCTCCCCTCTGCAACACCAGCCACCACTCACCCA | + |
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Preference number: 3 (lower is better) Translates to: LLSNYHLTAFPL*LPSATPATTHP Trigger: TGGGTGAGTGGTGGCTGGTGTTGCAGAGGGGAGCCACAGGGGGAATGCTGTGAGGTGGTAGTTTGAAAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGCATTCCCCCTGTGGCTCCCCTCTGCAACACCAGCCACCACTCACCCAGGACTCATGTTTCTAAGCTaGCAAGCTCAGGGAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: TAFPLWLPSATPATTHPGLMFLS*QAQGDK Trigger: CTTGTCTCCCTGAGCTTGCAAGCTTAGAAACATGAG...TCCTGGGTGAGTGGTGGCTGGTGTTGCAGAGGGGAGCCACAGGGGGAATGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR GCA 72 bp | GTGACGTCAGCAGCCCGGGGTAGGGCAGGTGTCAAGTaGATCCATGCAGTCATTCAGGGAAACAGGTTACCT | + |
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Preference number: 3 (lower is better) Translates to: VTSAARGRAGVK*IHAVIQGNRLP Trigger: AGGTAACCTGTTTCCCTGAATGACTGCATGGATGCACTTGACACCTGCCCTACCCCGGGCTGCTGACGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | CCCTCAAGTAGGTTGTTTCCCCAAGCCTCGGTAGCTTaGATGGCAGATTACCAGGGCCCAGCTTCTAACCCT | + |
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Preference number: 3 (lower is better) Translates to: PSSRLFPQASVA*MADYQGPASNP Trigger: AGGGTTAGAAGCTGGGCCCTGGTAATCTGCCATCCAAGCTACCGAGGCTTGGGGAAACAACCTACTTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR TCA 72 bp | GAGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTaGAGGTTCACCCTGGGGCACTTTGTCTTTGCAATG | + |
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Preference number: 3 (lower is better) Translates to: EECQMAKPGALA*RFTLGHFVFAM Trigger: CATTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | AGGGCCCAGCTTCTAACCCTGTATAAAACCAAGGTGTaGGAAGCTTGTGGGGCTCACATCTGTAGGTCACGG | + |
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Preference number: 3 (lower is better) Translates to: RAQLLTLYKTKV*EACGAHICRSR Trigger: CCGTGACCTACAGATGTGAGCCCCACAAGCTTCCCACACCTTGGTTTTATACAGGGTTAGAAGCTGGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | ATGGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCTaGTCCAGCACAGACCCACACCTCACTGTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: MDEGCSLRDISS*SSTDPHLTVQR Trigger: TCTTTGGACAGTGAGGTGTGGGTCTGTGCTGGACCAGCTAGAAATGTCACGGAGGGAGCACCCTTCATCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | AGCTTGAGGAATGCCAGATGGCAAAACCAGGAGCACTaGCCTGAAGGTTCACCCTGGGGCACTTTGTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SLRNARWQNQEH*PEGSPWGTLSL Trigger: CAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR GCA 72 bp | CTAAGACAGAATAGTGAGCCCCTAAGGGCCAGCAGCTaGTTTCAAACTACCACCTCACAGCATTCCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LRQNSEPLRASS*FQTTTSQHSPC Trigger: ACAGGGGGAATGCTGTGAGGTGGTAGTTTGAAAGCAGCTGCTGGCCCTTAGGGGCTCACTATTCTGTCTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | TGGCAAAACCAGGAGCACTGGCCTGAAGGTTCACCCTaGGGCACTTTGTCTTTGCAATGGTTCTTGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: WQNQEHWPEGSP*GTLSLQWFLLT Trigger: TGTGAGCAAGAACCATTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGTGCTCCTGGTTTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | CCAGAGCTGTTGCATAGGAAAGGCAAGGCATTGTCATaGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: PELLHRKGKALS*MKGAPSVTFLA Trigger: AGCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR TCA 72 bp | AGGGTGGATGAGGAGGAGCAGAGACTAGGGAGACTCTaGAATGAGTATGCTAATGATCACCTGAAGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: RVDEEEQRLGRL*NEYANDHLKLA Trigger: AGCCAGCTTCAGGTGATCATTAGCATACTCATTTCAGAGTCTCCCTAGTCTCTGCTCCTCCTCATCCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR TCA 72 bp | AGGGCTTTGCCACACCTTACCAGTATAAACAAAGCTTaGGGAATGCCAGATGGCAAAACCAGGAGCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: RALPHLTSINKA*GMPDGKTRSTG Trigger: GCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTTATACTGGTAAGGTGTGGCAAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR GCA 72 bp | ACTGGCCTGAAGGTTCACCCTGGGGCACTTTGTCTTTaGAATGGTTCTTGCTCACACCTTGTTGATTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TGLKVHPGALCL*NGSCSHLVDSS Trigger: ACTGGAATCAACAAGGTGTGAGCAAGAACCATTGCAAAGACAAAGTGCCCCAGGGTGAACCTTCAGGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTGCAATGGTTCTTGCTCACACCTTGTTGATTCCAGTGCCTGAGGTAGATGTCACTGTCCTTTTCTaGGTCCTCAAAAGCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VFAMVLAHTLLIPVPEVDVTVLF*VLKSCL Trigger: CAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTGAC...ATCTACCTCAGGCACTGGAATCAACAAGGTGTGAGCAAGAACCATTGCAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| 3UTR CCA 72 bp | AGGATTCACTTGGTTCAGGTTTGCTTTGTGCCAATCTaGATAAATGCCCAGTGTTTGGTGGGTATCTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: RIHLVQVCFVPI*INAQCLVGICR Trigger: TCTACAGATACCCACCAAACACTGGGCATTTATCCAGATTGGCACAAAGCAAACCTGAACCAAGTGAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR GCA 90 bp | ACAGCATTCCCCCTGTGGCTCCCCTCTGCAACACCAGCCACCACTCACCCAGGATCCAGCCTCTCCACCTaGTGGCCCACTTCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TAFPLWLPSATPATTHPGSSLST*WPTSSR Trigger: TCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCTGGA...TCCTGGGTGAGTGGTGGCTGGTGTTGCAGAGGGGAGCCACAGGGGGAATGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAAGGCATTGTCATGGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCGGTTTGCTGTCAGGCTaGTTCCGGCAGAGCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ERQGIVMDEGCSLRDISSGLLSG*FRQSGR Trigger: CCTCCCGCTCTGCCGGAAGCAGCCTGACAGCAAACC...GCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR CCA 90 bp | AAAGGCAAGGCATTGTCATGGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCTCGGGACAGCATCTCCTaGCCTCAGGTGGCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KGKALSWMKGAPSVTFLARDSIS*PQVAPQ Trigger: CTGAGGAGCCACCTGAGGCCAGGAGATGCTGTCCCG...AGCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR GCA 90 bp | GCCTTTCAGACAGACAGGGATGCTAATTCGACTGGGAACAATGGAGATGACCTTCTCAGGGTTCTCCTCTaGTTCTGGGTCAGGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: AFQTDRDANSTGNNGDDLLRVLL*FWVRAA Trigger: GGCCGCCCTGACCCAGAAGCAGAGGAGAACCCTGAG...AAGGTCATCTCCATTGTTCCCAGTCGAATTAGCATCCCTGTCTGTCTGAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR GCA 90 bp | AAGGTTCACCCTGGGGCACTTTGTCTTTGCAATGGTTCTTGCTCACACCTTGTTCTTCCTCCACCGGTTTaGTGTCAGGCTGCTTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KVHPGALCLCNGSCSHLVLPPPV*CQAASG Trigger: GCCGGAAGCAGCCTGACAGCAAACCGGTGGAGGAAG...AACAAGGTGTGAGCAAGAACCATTGCAAAGACAAAGTGCCCCAGGGTGAACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR TCA 90 bp | AAACAAAGCTTGAGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTGAAGGTACTTACCGAGCCTGGTaGCAGGGTACATGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KQSLRNARWQNQEHWPEGTYRAW*QGTCGH Trigger: ATGGCCACATGTACCCTGTCACCAGGCTCGGTAAGT...ACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR TCA 90 bp | GAAAGGCAAGGCATTGTCATGGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCCCACACCAGCATCAATaGCAATCTGAGGGATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERQGIVMDEGCSLRDISSPHQHQ*QSEGWL Trigger: AAGCCATCCCTCAGATTGTCATTGATGCTGGTGTGG...GCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | CATAGCCCAGAGCTGTTGCATAGGAAAGGCAAGGCATaGTCATGGATGAAGGGTGCTCCCTCCGTGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: HSPELLHRKGKA*SWMKGAPSVTF Trigger: AAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGCTTGAGGAATGCCAGATGGCAAAACCAGGAGCACTGGCCTGAAGGTAAGAAGAGGAAGAAATaGGGGTGCACCAGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: KQSLRNARWQNQEHWPEGKKRKK*GCTSTM Trigger: CATCGTGCTGGTGCACCCTCATTTCTTCCTCTTCTT...ACCTTCAGGCCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCAAGGCATTGTCATGGATGAAGGGTGCTCCCTCCGTGACATTTCTAGCAAGCCCTGGATAAGATaGTGGCCAGGATATCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ERQGIVMDEGCSLRDISSKPWIR*WPGYLL Trigger: TAGGAGATATCCTGGCCACCATCTTATCCAGGGCTT...GCTAGAAATGTCACGGAGGGAGCACCCTTCATCCATGACAATGCCTTGCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTCCTTTTCTTGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAACAGGGTTGTCCCCAAACCCGATaGTGGTCAGTGTCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCPFLGPQKLLGDRCEQGCPQTR*WSVSQS Trigger: GCTTTGTGACACTGACCACCATCGGGTTTGGGGACA...ACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | CAGGGCTTTGCCACACCTTACCAGTATAAACAAAGCTaGAGGAATGCCAGATGGCAAAACCAGGAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGFATPYQYKQS*RNARWQNQEHW Trigger: CCAGTGCTCCTGGTTTTGCCATCTGGCATTCCTCAAGCTTTGTTTATACTGGTAAGGTGTGGCAAAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | AAGAGGGGAGATGGTATACAGCATAGCCCAGAGCTGTaGCATAGGAAAGGCAAGGCATTGTCATGGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRGDGIQHSPEL*HRKGKALSWMK Trigger: CTTCATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTGTATACCATCTCCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | GGGCACTTTGTCTTTGCAATGGTTCTTGCTCACACCTaGTTGATTCCAGTGCCTGAGGTAGATCTTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHFVFAMVLAHT*LIPVPEVDLQG Trigger: CCCTTGAAGATCTACCTCAGGCACTGGAATCAACAAGGTGTGAGCAAGAACCATTGCAAAGACAAAGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CCA 90 bp | ATACAGCATAGCCCAGAGCTGTTGCATAGGAAAGGCAAGGCATTGTCATGGATGCCCTGGATAAGATGGTaGCCAGGATATCTCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: IQHSPELLHRKGKALSWMPWIRW*PGYLLC Trigger: ACATAGGAGATATCCTGGCCACCATCTTATCCAGGG...CATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAGGATTCACTTGGTTCAGGTTTGCTTTGTGCCAATCTGGATAAATGCCCATTTGAAGATATCGTaGGGGAGGCAAAGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRIHLVQVCFVPIWINAHLKIS*GRQRRA Trigger: GGCTCTCCTTTGCCTCCCCCACGATATCTTCAAATG...GGCATTTATCCAGATTGGCACAAAGCAAACCTGAACCAAGTGAATCCTCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR GCA 90 bp | ATACAGCATAGCCCAGAGCTGTTGCATAGGAAAGGCAAGGCATTGTCATGGATGTTGAGGTGTTGCAGATaGTCACACAAGTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHSPELLHRKGKALSWMLRCCR*SHKFFL Trigger: CAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAA...CATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTAATTGCAGGACTCATGTTTCTAAGCTTGCAAGCTCAGGGAGACAAGATAACCGACTGTAAGCCCTaGATAAGATGGTGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLIAGLMFLSLQAQGDKITDCKP*IRWWPG Trigger: TCCTGGCCACCATCTTATCCAGGGCTTACAGTCGGT...TATCTTGTCTCCCTGAGCTTGCAAGCTTAGAAACATGAGTCCTGCAATTAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | AACCAGATCTCCGTGTCATCTGTCACTGTCCTTTTCTaGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NQISVSSVTVLF*VLKSCLETDVN Trigger: GTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTGACAGATGACACGGAGATCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | CTGCAACACCAGCCACCACTCACCCAGGAACTAACTTaGCTAATTGCAGGACTCATGTTTCTAAGCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQHQPPLTQELT*LIAGLMFLSLQ Trigger: TTGCAAGCTTAGAAACATGAGTCCTGCAATTAGCAAAGTTAGTTCCTGGGTGAGTGGTGGCTGGTGTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGGGGCCACTTGGGAAGATTTTAACTTCCCTCAAAGTATAAATGCCAAATGGGGCTTGAGGTGTTaGAGATGCTCACACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAGATWEDFNFPQSINAKWGLRC*RCSHKF Trigger: GAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCA...TTTGGCATTTATACTTTGAGGGAAGTTAAAATCTTCCCAAGTGGCCCCAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | AATAATAAAATAAAGGATGTGTGTCCTTCCCCGACCTaGCCAACCAGATCTCCGTGTCATCTGTCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNKIKDVCPSPT*PTRSPCHLSLS Trigger: GGACAGTGACAGATGACACGGAGATCTGGTTGGCAAGGTCGGGGAAGGACACACATCCTTTATTTTATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | CACTTTGTCTTTGCAATGGTTCTTGCTCACACCTTGTaGATTCCAGTGCCTGAGGTAGATCTTCAAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFVFAMVLAHTL*IPVPEVDLQGL Trigger: CAACCCTTGAAGATCTACCTCAGGCACTGGAATCAACAAGGTGTGAGCAAGAACCATTGCAAAGACAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCCTGTCACACACACAAAAAGCAGTGACATCACTAGTTCTTTCATATTCAGCCTCTCCACCTGCTaGCCCACTTCATCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPVTHTKSSDITSSFIFSLSTC*PTSSRL Trigger: CAATCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCT...GAATATGAAAGAACTAGTGATGTCACTGCTTTTTGTGTGTGTGACAGGAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | TCTGTCACTGTCCTTTTCTTGGTCCTCAAAAGCTGCTaGGAGACAGATGTGAACAGGGTATGTTCTATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVTVLFLVLKSC*ETDVNRVCSIG Trigger: TCCTATAGAACATACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGCTCAGGGAGACAAGATACAGCCGTGAGGTATTTCAAATAACCTTCAAATACATTTCAGGATGTTaGACAGATCGTCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CKLRETRYSREVFQITFKYISGC*TDRPGT Trigger: AGTTCCTGGACGATCTGTGCAACATCCTGAAATGTA...TTTGAAGGTTATTTGAAATACCTCACGGCTGTATCTTGTCTCCCTGAGCTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCCTGTCACACACACAAAAAGCAGTGACATCACTAGTTCTTTCATATTCTCTCCATGCCCACGATaGTGTAGATGGAGAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLPVTHTKSSDITSSFIFSPCPR*CRWRRR Trigger: TCTTCTTCTCCATCTACATCATCGTGGGCATGGAGA...GAATATGAAAGAACTAGTGATGTCACTGCTTTTTGTGTGTGTGACAGGAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| 3UTR CAA 72 bp | ACCTTTCATGAAGTCACTAATGCTCTGAGGATTCACTaGGTTCAGGTTTGCTTTGTGCCAATCTGGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFHEVTNALRIH*VQVCFVPIWIN Trigger: ATTTATCCAGATTGGCACAAAGCAAACCTGAACCAAGTGAATCCTCAGAGCATTAGTGACTTCATGAAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS GCA 90 bp | CTCGGTCTCCCAGAAGGGGAGGATAGCAGCCGCGCAGGAGATGTATaGAAAGACGACCAGGGCGATGACGGGGAGAGGGATGTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLPEGEDSSRAGDV*KDDQGDDGERDVQP Trigger: AGGCTGGACATCCCTCTCCCCGTCATCGCCCTGGTCGTCTTTGCATACATCTCCTGCGCGGCTGCTATCCTCCCCTTCTGGGAGACCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CCA 90 bp | ACCAGGGCGATGACGGGGAGAGGGATGTCCAGCCTCTCCACCTGCTaGCCCACTTCATCCAGATTGCTGAGAATAGAACAGGACAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRAMTGRGMSSLSTC*PTSSRLLRIEQDSR Trigger: GCGACTGTCCTGTTCTATTCTCAGCAATCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCTGGACATCCCTCTCCCCGTCATCGCCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS GCA 90 bp | ACGACCAGGGCGATGACGGGGAGAGGGATGTCCAGCCTCTCCACCTaGTGGCCCACTTCATCCAGATTGCTGAGAATAGAACAGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TTRAMTGRGMSSLST*WPTSSRLLRIEQDS Trigger: ACTGTCCTGTTCTATTCTCAGCAATCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCTGGACATCCCTCTCCCCGTCATCGCCCTGGTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS CCA 90 bp | AAGAGAGCGCTCAGGAAGGACCAGTCCTGGGGCGCCTTGAGCCACTaGGGCTTGAGGTGTTGCAGATGCTCACACAAGTTCTTCCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KRALRKDQSWGALSH*GLRCCRCSHKFFLL Trigger: TAGCAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAAGGCGCCCCAGGACTGGTCCTTCCTGAGCGCTCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR CAA 90 bp | CACTGTCCTTTTCTTGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAACAGGGTAGGCCGGGCAGAAGCTaGCCCAGGGCTTCGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCPFLGPQKLLGDRCEQGRPGRS*PRASGQ Trigger: CTGCCCCGAAGCCCTGGGCAAGCTTCTGCCCGGCCT...ACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS GCA 90 bp | AAGGACCAGTCCTGGGGCGCCTTGAGCCACTGGGGCTTGAGGTGTTaGAGATGCTCACACAAGTTCTTCCTGCTACCTTCAACCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KDQSWGALSHWGLRC*RCSHKFFLLPSTTV Trigger: GACAGTGGTTGAAGGTAGCAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAAGGCGCCCCAGGACTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR CAA 90 bp | ACAGCATTCCCCCTGTGGCTCCCCTCTGCAACACCAGCCACCACTCACCCAGGACCCACTTCATCCAGATaGCTGAGAATAGAACAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TAFPLWLPSATPATTHPGPTSSR*LRIEQD Trigger: GTCCTGTTCTATTCTCAGCAATCTGGATGAAGTGGG...TCCTGGGTGAGTGGTGGCTGGTGTTGCAGAGGGGAGCCACAGGGGGAATGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS GCA 90 bp | CAGTCCTGGGGCGCCTTGAGCCACTGGGGCTTGAGGTGTTGCAGATaGTCACACAAGTTCTTCCTGCTACCTTCAACCACTGTCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QSWGALSHWGLRCCR*SHKFFLLPSTTVRL Trigger: TAACCTGACAGTGGTTGAAGGTAGCAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAAGGCGCCCCAGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR CAA 90 bp | AGCTGCTTTCAAACTACCACCTCACAGCATTCCCCCTGTGGCTCCCCTCTGCAATTGAGCCACTGGGGCTaGAGGTGTTGCAGATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCFQTTTSQHSPCGSPLQLSHWG*RCCRCS Trigger: TGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAA...TTGCAGAGGGGAGCCACAGGGGGAATGCTGTGAGGTGGTAGTTTGAAAGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTAATTGCAGGACTCATGTTTCTAAGCTTGCAAGCTCAGGGAGACAAGATACAGTCCTGGGGCGCCTaGAGCCACTGGGGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLIAGLMFLSLQAQGDKIQSWGA*SHWGLR Trigger: CCTCAAGCCCCAGTGGCTCAAGGCGCCCCAGGACTG...TATCTTGTCTCCCTGAGCTTGCAAGCTTAGAAACATGAGTCCTGCAATTAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR CAA 90 bp | CACTGTCCTTTTCTTGGTCCTCAAAAGCTGCTTGGAGACAGATGTGAACAGGGTCTGGGGCTTGAGGTGTaGCAGATGCTCACACAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HCPFLGPQKLLGDRCEQGLGLEV*QMLTQV Trigger: AACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAG...ACCCTGTTCACATCTGTCTCCAAGCAGCTTTTGAGGACCAAGAAAAGGACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS TCA 90 bp | TGTAAGCCCTGGATAAGATGGTGGCCAGGATATCTCCTATGTCTGTaGGGACCAGGAACATTAGAGGGATTCCAAAGAGCGCATACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CKPWIRWWPGYLLCL*GPGTLEGFQRAHTA Trigger: TGCTGTATGCGCTCTTTGGAATCCCTCTAATGTTCCTGGTCCTCACAGACATAGGAGATATCCTGGCCACCATCTTATCCAGGGCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS-3UTR CAA 90 bp | GCCTTTCAGACAGACAGGGATGCTAATTCGACTGGGAACAATGGAGATGACCTTGTGGGTGGTTGTAGCTaGTTCTTTTTCTCACGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AFQTDRDANSTGNNGDDLVGGCS*FFFSRA Trigger: TGCCCGTGAGAAAAAGAACAAGCTACAACCACCCAC...AAGGTCATCTCCATTGTTCCCAGTCGAATTAGCATCCCTGTCTGTCTGAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS-3UTR CAA 90 bp | ATACAGCATAGCCCAGAGCTGTTGCATAGGAAAGGCAAGGCATTGTCATGGATGTTACATTTCAGGATGTaGCACAGATCGTCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQHSPELLHRKGKALSWMLHFRM*HRSSRN Trigger: GTTCCTGGACGATCTGTGCAACATCCTGAAATGTAA...CATCCATGACAATGCCTTGCCTTTCCTATGCAACAGCTCTGGGCTATGCTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CAA 72 bp | CAGGACAGTCGCCCCAGCACCAGCTCGGGACAGGAGTaGCTCCTCTCCACGGGACGCGTGGGTGGTTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QDSRPSTSSGQE*LLSTGRVGGCS Trigger: GCTACAACCACCCACGCGTCCCGTGGAGAGGAGCAACTCCTGTCCCGAGCTGGTGCTGGGGCGACTGTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS GCA 72 bp | AGGACAGTCGCCCCAGCACCAGCTCGGGACAGGAGTTaGTCCTCTCCACGGGACGCGTGGGTGGTTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTVAPAPARDRS*SSPRDAWVVVA Trigger: AGCTACAACCACCCACGCGTCCCGTGGAGAGGAGCAACTCCTGTCCCGAGCTGGTGCTGGGGCGACTGTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS TCA 72 bp | CCGCGCAGGAGATGTATGCAAAGACGACCAGGGCGATaGCGGGGAGAGGGATGTCCAGCCTCTCCACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRRCMQRRPGR*RGEGCPASPPA Trigger: AGCAGGTGGAGAGGCTGGACATCCCTCTCCCCGTCATCGCCCTGGTCGTCTTTGCATACATCTCCTGCGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS GCA 72 bp | CCAGAAGGGGAGGATAGCAGCCGCGCAGGAGATGTATaGAAAGACGACCAGGGCGATGACGGGGAGAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PEGEDSSRAGDV*KDDQGDDGERD Trigger: ATCCCTCTCCCCGTCATCGCCCTGGTCGTCTTTGCATACATCTCCTGCGCGGCTGCTATCCTCCCCTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CAA 90 bp | AGAGGGATGTCCAGCCTCTCCACCTGCTGGCCCACTTCATCCAGATaGCTGAGAATAGAACAGGACAGTCGCCCCAGCACCAGCTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGMSSLSTCWPTSSR*LRIEQDSRPSTSSG Trigger: TCCCGAGCTGGTGCTGGGGCGACTGTCCTGTTCTATTCTCAGCAATCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCTGGACATCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CAA 90 bp | AGAATAGAACAGGACAGTCGCCCCAGCACCAGCTCGGGACAGGAGTaGCTCCTCTCCACGGGACGCGTGGGTGGTTGTAGCTTGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RIEQDSRPSTSSGQE*LLSTGRVGGCSLFF Trigger: AAAGAACAAGCTACAACCACCCACGCGTCCCGTGGAGAGGAGCAACTCCTGTCCCGAGCTGGTGCTGGGGCGACTGTCCTGTTCTATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CCA 72 bp | GCTCGGGACAGGAGTTGCTCCTCTCCACGGGACGCGTaGGTGGTTGTAGCTTGTTCTTTTTCTCACGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ARDRSCSSPRDA*VVVACSFSHGQ Trigger: TTGCCCGTGAGAAAAAGAACAAGCTACAACCACCCACGCGTCCCGTGGAGAGGAGCAACTCCTGTCCCGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CAA 72 bp | AAGGACCAGTCCTGGGGCGCCTTGAGCCACTGGGGCTaGAGGTGTTGCAGATGCTCACACAAGTTCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KDQSWGALSHWG*RCCRCSHKFFL Trigger: CAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAAGGCGCCCCAGGACTGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CAA 72 bp | TCCAGCCTCTCCACCTGCTGGCCCACTTCATCCAGATaGCTGAGAATAGAACAGGACAGTCGCCCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSTCWPTSSR*LRIEQDSRPST Trigger: GGTGCTGGGGCGACTGTCCTGTTCTATTCTCAGCAATCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS CAA 90 bp | GAAGGACCAGTCCTGGGGCGCCTTGAGCCACTGGGGCTTGAGGTGTaGCAGATGCTCACACAAGTTCTTCCTGCTACCTTCAACCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: EGPVLGRLEPLGLEV*QMLTQVLPATFNHC Trigger: ACAGTGGTTGAAGGTAGCAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAAGGCGCCCCAGGACTGGTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS GCA 72 bp | GCGATGACGGGGAGAGGGATGTCCAGCCTCTCCACCTaGTGGCCCACTTCATCCAGATTGCTGAGAATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AMTGRGMSSLST*WPTSSRLLRIE Trigger: TTCTATTCTCAGCAATCTGGATGAAGTGGGCCAGCAGGTGGAGAGGCTGGACATCCCTCTCCCCGTCATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS GCA 72 bp | GGCGCCTTGAGCCACTGGGGCTTGAGGTGTTGCAGATaGTCACACAAGTTCTTCCTGCTACCTTCAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: GALSHWGLRCCR*SHKFFLLPSTT Trigger: AGTGGTTGAAGGTAGCAGGAAGAACTTGTGTGAGCATCTGCAACACCTCAAGCCCCAGTGGCTCAAGGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
||
| CDS TCA 72 bp | GCTGCGGGTTTAGGAGTTCATCCACACCAGCATCAATaGCAATCTGAGGGATGGCTTCCTCCACCGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: AAGLGVHPHQHQ*QSEGWLPPPVC Trigger: GCAAACCGGTGGAGGAAGCCATCCCTCAGATTGTCATTGATGCTGGTGTGGATGAACTCCTAAACCCGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS CAA 90 bp | GGACAGGAGTTGCTCCTCTCCACGGGACGCGTGGGTGGTTGTAGCTaGTTCTTTTTCTCACGGGCAACTAATCTCTCAAACAGCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GQELLLSTGRVGGCS*FFFSRATNLSNSST Trigger: TGTGGAGCTGTTTGAGAGATTAGTTGCCCGTGAGAAAAAGAACAAGCTACAACCACCCACGCGTCCCGTGGAGAGGAGCAACTCCTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS CAA 72 bp | TTGCTCCTCTCCACGGGACGCGTGGGTGGTTGTAGCTaGTTCTTTTTCTCACGGGCAACTAATCTCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LLLSTGRVGGCS*FFFSRATNLSN Trigger: GTTTGAGAGATTAGTTGCCCGTGAGAAAAAGAACAAGCTACAACCACCCACGCGTCCCGTGGAGAGGAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS TCA 72 bp | AAGGTAGCGAAACTTCCCTTTGGCAAACAAACAGCATaGGGGTTTTGTAGGTGTGCAGGAGCCGGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KVAKLPFGKQTA*GFCRCAGAGSA Trigger: TGCAGAACCGGCTCCTGCACACCTACAAAACCCTCATGCTGTTTGTTTGCCAAAGGGAAGTTTCGCTACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS TCA 72 bp | TGGATAAGATGGTGGCCAGGATATCTCCTATGTCTGTaGGGACCAGGAACATTAGAGGGATTCCAAAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: WIRWWPGYLLCL*GPGTLEGFQRA Trigger: CGCTCTTTGGAATCCCTCTAATGTTCCTGGTCCTCACAGACATAGGAGATATCCTGGCCACCATCTTATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS CAA 72 bp | CTACCTTCAACCACTGTCAGGTTACATTTCAGGATGTaGCACAGATCGTCCAGGAACTTCTTCAACTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LPSTTVRLHFRM*HRSSRNFFNSG Trigger: CCCTGAGTTGAAGAAGTTCCTGGACGATCTGTGCAACATCCTGAAATGTAACCTGACAGTGGTTGAAGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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| CDS GCA 72 bp | TACCTTCAACCACTGTCAGGTTACATTTCAGGATGTTaGACAGATCGTCCAGGAACTTCTTCAACTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: YLQPLSGYISGC*TDRPGTSSTQG Trigger: ACCCTGAGTTGAAGAAGTTCCTGGACGATCTGTGCAACATCCTGAAATGTAACCTGACAGTGGTTGAAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065204.8 |
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