Pregenerated sensors for KCNK16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023387Ensembl transcript IDs: ENSMUST00000024155.9, ENSMUST00000225596.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTCATATTTCAATCCTTTCCTGGGTGGCAGTAAGACTTGGGTGCTaGGAACCCTCTGCCAATGCGGGTCCTTCTCAGGGACTCCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RHISILSWVAVRLGC*EPSANAGPSQGLPS Trigger: TGAGGGGAGTCCCTGAGAAGGACCCGCATTGGCAGAGGGTTCCCAGCACCCAAGTCTTACTGCCACCCAGGAAAGGATTGAAATATGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 90 bp | GCAGCCAAGTTTATTGTCACAGGACTCCTGCCTAAGCTGAGGGGCTaGGGACTTCCTCCGAGTGCTTCCTTGTATCACCCTAGATCTCGC | + |
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Preference number: 1 (lower is better) Translates to: AAKFIVTGLLPKLRG*GLPPSASLYHPRSR Trigger: GCGAGATCTAGGGTGATACAAGGAAGCACTCGGAGGAAGTCCCCAGCCCCTCAGCTTAGGCAGGAGTCCTGTGACAATAAACTTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 90 bp | GCATCCCCTGGTGTGTGTCCAGCTCCCTTCCTCCAGCCACCGCCCTaGACTTTCATTCTCCCCAGGTTTATTCCCATCAAAGATGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: ASPGVCPAPFLQPPP*TFILPRFIPIKDED Trigger: ATCCTCATCTTTGATGGGAATAAACCTGGGGAGAATGAAAGTTCAGGGCGGTGGCTGGAGGAAGGGAGCTGGACACACACCAGGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 90 bp | AGGCTAGCAGGCAAGAAGACCGGACCCAAATTTTCCTTGCTGCTTTaGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGAAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RLAGKKTGPKFSLLL*REVPASPSTQKRSG Trigger: CCCACTTCTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGTCCGGTCTTCTTGCCTGCTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 90 bp | TTAGAGACGTCATATTTCAATCCTTTCCTGGGTGGCAGTAAGACTTaGGTGCTGGGAACCCTCTGCCAATGCGGGTCCTTCTCAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: LETSYFNPFLGGSKT*VLGTLCQCGSFSGT Trigger: AGTCCCTGAGAAGGACCCGCATTGGCAGAGGGTTCCCAGCACCCAAGTCTTACTGCCACCCAGGAAAGGATTGAAATATGACGTCTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 90 bp | GCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGAAGTaGGGTCCAGCAGGTGTCGGGGTGTTAGAGACGTCATATTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: ALEGSPCISIHPEKK*GPAGVGVLETSYFN Trigger: ATTGAAATATGACGTCTCTAACACCCCGACACCTGCTGGACCCCACTTCTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 90 bp | CACTTTGTAGGCACATCTGTCTCCTTTCTCTCTCTGGAAAGTTGCTaGGAAGTGTGTGGGTTGAGAAGAAAGGGGAAGGGCAGGGAATGG | + |
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Preference number: 1 (lower is better) Translates to: HFVGTSVSFLSLESC*EVCGLRRKGKGREW Trigger: CCATTCCCTGCCCTTCCCCTTTCTTCTCAACCCACACACTTCCCAGCAACTTTCCAGAGAGAGAAAGGAGACAGATGTGCCTACAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 90 bp | GGCAGTAGTGATTTGGCAACCACGATCCAGGTTCTCTTTGGGAGATaGGAAAAGCGCCAAGGGCAAACTTCACATCTCCATCCATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GSSDLATTIQVLFGR*EKRQGQTSHLHPCR Trigger: TCTGCATGGATGGAGATGTGAAGTTTGCCCTTGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGCCAAATCACTACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 90 bp | ATTCCCATCAAAGATGAGGATGCTGCCTTGGAGCTCCTTCAAGACTaGCACACTGACACAATGAAGGCAGAAACCACCACTATGTGCTAC | + |
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Preference number: 1 (lower is better) Translates to: IPIKDEDAALELLQD*HTDTMKAETTTMCY Trigger: GTAGCACATAGTGGTGGTTTCTGCCTTCATTGTGTCAGTGTGTCAGTCTTGAAGGAGCTCCAAGGCAGCATCCTCATCTTTGATGGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CAA 90 bp | CGGGCTGGGAGGCTAGCAGGCAAGAAGACCGGACCCAAATTTTCCTaGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RAGRLAGKKTGPKFS*LLWREVPASPSTQK Trigger: TTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGTCCGGTCTTCTTGCCTGCTAGCCTCCCAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAGGGGCCCCCAGTGTTGTTCTAGGATTCCTCTCCACTTGTGGGCAAGGAAAGTCCACCTTTGCCTaGAGCCTAAGGGCTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: LKGAPSVVLGFLSTCGQGKSTFA*SLRAPM Trigger: CATGGGAGCCCTTAGGCTGCAGGCAAAGGTGGACTT...TCCTTGCCCACAAGTGGAGAGGAATCCTAGAACAACACTGGGGGCCCCTTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTTCTGGCCCACAATGTCACGATCTGGCAGAAGAACCAGGCTCGGTGGGATCCAGGTTCTCTTTaGGAGATGGGAAAAGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: SCLLAHNVTIWQKNQARWDPGSL*EMGKAP Trigger: TGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATC...CCACCGAGCCTGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGAAGTGGGGTCCAGCAGGTGCTCTCTCTGGAAAGTTaGTGGGAAGTGTGTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: REVPASPSTQKRSGVQQVLSLES*WEVCGL Trigger: CAACCCACACACTTCCCAGCAACTTTCCAGAGAGAG...CACCTGCTGGACCCCACTTCTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR GCA 90 bp | GACGAACCTTTCCTGCCTTCTGGCCCACAATGTCACGATCTGGCAGAAGAACCAAGTCAAGTCCACCTTTaGCTGCAGCCTAAGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DEPFLPSGPQCHDLAEEPSQVHL*LQPKGS Trigger: GGAGCCCTTAGGCTGCAGGCAAAGGTGGACTTGACT...TGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGAAAGGTTCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTTCTGGCCCACAATGTCACGATCTGGCAGAAGAACCAGGCTCGGTGGTTGCTGGGAAGTGTGTaGGTTGAGAAGAAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SCLLAHNVTIWQKNQARWLLGSV*VEKKGE Trigger: TTCCCCTTTCTTCTCAACCCACACACTTCCCAGCAA...CCACCGAGCCTGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGAGGGTCAGAGGAGGTCATGTTCAAGAAAGTGGTGGGACCCCTGAAAGGATTCCTCTCCACTTGTaGGCAAGGAGAGCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ALRVRGGHVQESGGTPERIPLHL*ARRAGE Trigger: TTCCCCAGCTCTCCTTGCCCACAAGTGGAGAGGAAT...CCTTTCAGGGGTCCCACCACTTTCTTGAACATGACCTCCTCTGACCCTCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CAA 90 bp | GAGGCTAGCAGGCAAGAAGACCGGACCCAAATTTTCCTTGCTGCTTaGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: EASRQEDRTQIFLAA*EGSPCISIHPEKKW Trigger: CCACTTCTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGTCCGGTCTTCTTGCCTGCTAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGGGAAGTGTGTGGGTTaGGAAGAAAGGGGAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TQIFLAALEGSPCISIHPGKCVG*EERGRA Trigger: TGCCCTTCCCCTTTCTTCTCAACCCACACACTTCCC...TGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGAGGGTCAGAGGAGGTCATGTTCAAGAAAGTGGTGGGACCCCTGAAAGGCTGGGGAATTCTGACTaGCAGCCTTCTTGTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ALRVRGGHVQESGGTPERLGNSD*QPSCSS Trigger: TGAGGAACAAGAAGGCTGCCAGTCAGAATTCCCCAG...CCTTTCAGGGGTCCCACCACTTTCTTGAACATGACCTCCTCTGACCCTCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGAGGGTCAGAGGAGGTCATGTTCAAGAAAGTGGTGGGACCCCTGAAAGGATCCATGCAGATCTTTaGTCTTTGTCTCCTCACCGC | + |
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Preference number: 2 (lower is better) Translates to: ALRVRGGHVQESGGTPERIHADL*SLSPHR Trigger: GCGGTGAGGAGACAAAGATCAAAGATCTGCATGGAT...CCTTTCAGGGGTCCCACCACTTTCTTGAACATGACCTCCTCTGACCCTCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTGAGACTCCTGAGGACGGCTTCCTGTATGCATCAAAGGCATCCCCTGGTGACACACTGACACAATaGAGGCAGAAACCACCACTA | + |
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Preference number: 2 (lower is better) Translates to: SCETPEDGFLYASKASPGDTLTQ*RQKPPL Trigger: TAGTGGTGGTTTCTGCCTTCATTGTGTCAGTGTGTC...ACCAGGGGATGCCTTTGATGCATACAGGAAGCCGTCCTCAGGAGTCTCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGTGAGACTCCTGAGGACGGCTTCCTGTATGCATCAAAGGCATCCCCTGGAGCTCCTTCAAGACTaGCACACTGACACAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: SAVRLLRTASCMHQRHPLELLQD*HTDTMK Trigger: CTTCATTGTGTCAGTGTGTCAGTCTTGAAGGAGCTC...CAGGGGATGCCTTTGATGCATACAGGAAGCCGTCCTCAGGAGTCTCACAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAAGAGCTGGGGAATTCTaGCTGGCAGCCTTCTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: TQIFLAALEGSPCISIHPRAGEF*LAAFLF Trigger: GAACAAGAAGGCTGCCAGTCAGAATTCCCCAGCTCT...TGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGATGCCACCGGAGAGATaGCAGGCTATGAAGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: IFLAALEGSPCISIHPEKMPPER*QAMKPL Trigger: CAAGGGCTTCATAGCCTGTCATCTCTCCGGTGGCAT...CTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGAGACTCCTGAGGACGGCTTCCTGTATGCATCAAAGGCATCCCCTGGTATGGCAGTAGTGATTTaGCAACCACGATCCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SCETPEDGFLYASKASPGMAVVI*QPRSRF Trigger: GAACCTGGATCGTGGTTGCCAAATCACTACTGCCAT...ACCAGGGGATGCCTTTGATGCATACAGGAAGCCGTCCTCAGGAGTCTCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTGTGAGTCTGGGACGAACCTTTCCTGCCTTCTGGCCCACAATGTCACGATATTCCCATCAAAGATaGGGATGCTGCCTTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: SLVSLGRTFPAFWPTMSRYSHQR*GCCLGA Trigger: AGCTCCAAGGCAGCATCCTCATCTTTGATGGGAATA...TCGTGACATTGTGGGCCAGAAGGCAGGAAAGGTTCGTCCCAGACTCACAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAGAGATGACAGGCTATaGAGCCCTTGGGATCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QIFLAALEGSPCISIHPERDDRL*SPWDLL Trigger: CAGCAGATCCCAAGGGCTTCATAGCCTGTCATCTCT...TTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCATCTCTGGAAAGTTGCTaGGAAGTGTGTGGGTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TQIFLAALEGSPCISIHPSLESC*EVCGLR Trigger: TCTCAACCCACACACTTCCCAGCAACTTTCCAGAGA...TGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CAA 90 bp | GTTAAGATGGCAGTAGTGATTTGGCAACCACGATCCAGGTTCTCTTaGGGAGATGGGAAAAGCGCCAAGGGCAAACTTCACATCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: VKMAVVIWQPRSRFS*GDGKSAKGKLHISI Trigger: GATGGAGATGTGAAGTTTGCCCTTGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGCCAAATCACTACTGCCATCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CAA 90 bp | CATCAAAGGCATCCCCTGGTGTGTGTCCAGCTCCCTTCCTCCAGCCACCGCCCTGGGAATGGCATGGGTTaGGGGAGGTCAGGACACTTG | + |
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Preference number: 3 (lower is better) Translates to: HQRHPLVCVQLPSSSHRPGNGMG*GRSGHL Trigger: CAAGTGTCCTGACCTCCCCAAACCCATGCCATTCCC...AGGGCGGTGGCTGGAGGAAGGGAGCTGGACACACACCAGGGGATGCCTTTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR GCA 72 bp | GGCAGTAAGACTTGGGTGCTGGGAACCCTCTGCCAATaGGGGTCCTTCTCAGGGACTCCCCTCAACCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: GSKTWVLGTLCQ*GSFSGTPLNLW Trigger: CCAGAGGTTGAGGGGAGTCCCTGAGAAGGACCCGCATTGGCAGAGGGTTCCCAGCACCCAAGTCTTACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR GCA 72 bp | CTGGGTGGCAGTAAGACTTGGGTGCTGGGAACCCTCTaGCAATGCGGGTCCTTCTCAGGGACTCCCCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: LGGSKTWVLGTL*QCGSFSGTPLN Trigger: GTTGAGGGGAGTCCCTGAGAAGGACCCGCATTGGCAGAGGGTTCCCAGCACCCAAGTCTTACTGCCACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | AACCTTTCCTGCCTTCTGGCCCACAATGTCACGATCTaGCAGAAGAACCAGGCTCGGTGGGAGTCCATGCCA | + |
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Preference number: 3 (lower is better) Translates to: NLSCLLAHNVTI*QKNQARWESMP Trigger: TGGCATGGACTCCCACCGAGCCTGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGAAAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | TCAATCCTTTCCTGGGTGGCAGTAAGACTTGGGTGCTaGGAACCCTCTGCCAATGCGGGTCCTTCTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SILSWVAVRLGC*EPSANAGPSQG Trigger: TCCCTGAGAAGGACCCGCATTGGCAGAGGGTTCCCAGCACCCAAGTCTTACTGCCACCCAGGAAAGGATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | GGAAGTCCCTGCATCTCCATCCACCCAGAAAAGAAGTaGGGTCCAGCAGGTGTCGGGGTGTTAGAGACGTCA | + |
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Preference number: 3 (lower is better) Translates to: GSPCISIHPEKK*GPAGVGVLETS Trigger: TGACGTCTCTAACACCCCGACACCTGCTGGACCCCACTTCTTTTCTGGGTGGATGGAGATGCAGGGACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 72 bp | CCTCTCCACTTGTGGGCAAGGAGAGCTGGGGAATTCTaGCTGGCAGCCTTCTTGTTCCTCAGCTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: PLHLWARRAGEF*LAAFLFLSCET Trigger: AGTCTCACAGCTGAGGAACAAGAAGGCTGCCAGTCAGAATTCCCCAGCTCTCCTTGCCCACAAGTGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 72 bp | GGTGTGTGTCCAGCTCCCTTCCTCCAGCCACCGCCCTaGACTTTCATTCTCCCCAGGTTTATTCCCATCAAA | + |
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Preference number: 3 (lower is better) Translates to: GVCPAPFLQPPP*TFILPRFIPIK Trigger: TTTGATGGGAATAAACCTGGGGAGAATGAAAGTTCAGGGCGGTGGCTGGAGGAAGGGAGCTGGACACACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | AGTCTTGTGAGTCTGGGACGAACCTTTCCTGCCTTCTaGCCCACAATGTCACGATCTGGCAGAAGAACCAGG | + |
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Preference number: 3 (lower is better) Translates to: SLVSLGRTFPAF*PTMSRSGRRTR Trigger: CCTGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGAAAGGTTCGTCCCAGACTCACAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGTTCCTAGTCTTGTGAGTCTGGGACGAACCTTTCCTGCCTTCTGGCCCACATGGGAAGTGTGTGGGTaGAGAAGAAAGGGGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LVPSLVSLGRTFPAFWPTWEVCG*RRKGKG Trigger: GCCCTTCCCCTTTCTTCTCAACCCACACACTTCCCA...TGTGGGCCAGAAGGCAGGAAAGGTTCGTCCCAGACTCACAAGACTAGGAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | GGCACATCTGTCTCCTTTCTCTCTCTGGAAAGTTGCTaGGAAGTGTGTGGGTTGAGAAGAAAGGGGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GTSVSFLSLESC*EVCGLRRKGKG Trigger: GCCCTTCCCCTTTCTTCTCAACCCACACACTTCCCAGCAACTTTCCAGAGAGAGAAAGGAGACAGATGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | TCATATTTCAATCCTTTCCTGGGTGGCAGTAAGACTTaGGTGCTGGGAACCCTCTGCCAATGCGGGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SYFNPFLGGSKT*VLGTLCQCGSF Trigger: GAAGGACCCGCATTGGCAGAGGGTTCCCAGCACCCAAGTCTTACTGCCACCCAGGAAAGGATTGAAATATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | GGCAAGAAGACCGGACCCAAATTTTCCTTGCTGCTTTaGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GKKTGPKFSLLL*REVPASPSTQK Trigger: TTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGTCCGGTCTTCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGTCTCTCTCTGGAAAGTaGCTGGGAAGTGTGTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: IFLAALEGSPCISIHPEKSLSGK*LGSVWV Trigger: AACCCACACACTTCCCAGCAACTTTCCAGAGAGAGA...CTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 72 bp | GGATGCTGCCTTGGAGCTCCTTCAAGACTGACACACTaGCACAATGAAGGCAGAAACCACCACTATGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: GCCLGAPSRLTH*HNEGRNHHYVL Trigger: TAGCACATAGTGGTGGTTTCTGCCTTCATTGTGTCAGTGTGTCAGTCTTGAAGGAGCTCCAAGGCAGCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CCA 72 bp | GATTTGGCAACCACGATCCAGGTTCTCTTTGGGAGATaGGAAAAGCGCCAAGGGCAAACTTCACATCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: DLATTIQVLFGR*EKRQGQTSHLH Trigger: ATGGAGATGTGAAGTTTGCCCTTGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGCCAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR-3UTR CAA 90 bp | CAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAACATCCATGCAGATCTTaGATCTTTGTCTCCTCACCG | + |
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Preference number: 3 (lower is better) Translates to: QIFLAALEGSPCISIHPEHPCRS*IFVSSP Trigger: CGGTGAGGAGACAAAGATCAAAGATCTGCATGGATG...TTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 72 bp | AAAGATGAGGATGCTGCCTTGGAGCTCCTTCAAGACTaGCACACTGACACAATGAAGGCAGAAACCACCACT | + |
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Preference number: 3 (lower is better) Translates to: KDEDAALELLQD*HTDTMKAETTT Trigger: AGTGGTGGTTTCTGCCTTCATTGTGTCAGTGTGTCAGTCTTGAAGGAGCTCCAAGGCAGCATCCTCATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR TCA 72 bp | AACTTTCATTCTCCCCAGGTTTATTCCCATCAAAGATaGGGATGCTGCCTTGGAGCTCCTTCAAGACTGACA | + |
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Preference number: 3 (lower is better) Translates to: NFHSPQVYSHQR*GCCLGAPSRLT Trigger: TGTCAGTCTTGAAGGAGCTCCAAGGCAGCATCCTCATCTTTGATGGGAATAAACCTGGGGAGAATGAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR GCA 72 bp | GTAGTAAATAATACAAAAGTCAAGTCCACCTTTGCCTaGAGCCTAAGGGCTCCCATGACCATGTTAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: VVNNTKVKSTFA*SLRAPMTMLRW Trigger: CCATCTTAACATGGTCATGGGAGCCCTTAGGCTGCAGGCAAAGGTGGACTTGACTTTTGTATTATTTACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGAAGTGGGGTCCAGCAGGTGTCCAATGTGGTCAGGTaGGCCCGCAGCCCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: REVPASPSTQKRSGVQQVSNVVR*ARSPVP Trigger: GGGCACAGGGCTGCGGGCCCACCTGACCACATTGGA...CACCTGCTGGACCCCACTTCTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | GCAACCACGATCCAGGTTCTCTTTGGGAGATGGGAAAAGCGCCAAGGGCAAACTCCCACCTGTCCAATGTaGTCAGGTGGGCCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATTIQVLFGRWEKRQGQTPTCPM*SGGPAA Trigger: GGCTGCGGGCCCACCTGACCACATTGGACAGGTGGG...AGTTTGCCCTTGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTGATTTGGCAACCACGATCCAGGTTCTCTTTGGGAGATGGGAAAAGCGCGCAGGGATCCCAGGCTaGGGACCACCGCCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSDLATTIQVLFGRWEKRAGIPG*GPPPAM Trigger: CATGGCTGGCGGTGGTCCTCAGCCTGGGATCCCTGC...GCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGCCAAATCACTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR TCA 90 bp | CATCAAAGGCATCCCCTGGTGTGTGTCCAGCTCCCTTCCTCCAGCCACCGCCCTGATGGGGATTTTCTGTaGTCTAGGCTCAGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HQRHPLVCVQLPSSSHRPDGDFL*SRLRVR Trigger: CCTGACTCTGAGCCTAGATCACAGAAAATCCCCATC...AGGGCGGTGGCTGGAGGAAGGGAGCTGGACACACACCAGGGGATGCCTTTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR GCA 90 bp | ACCCAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGCCAGGCCCAGGACCTaGAGGAGCTGGGAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQIFLAALEGSPCISIHPARPRT*RSWECL Trigger: CAGGCATTCCCAGCTCCTGCAGGTCCTGGGCCTGGC...TGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR GCA 90 bp | TCCTGCCTTCTGGCCCACAATGTCACGATCTGGCAGAAGAACCAGGCTCGGTGGCTCAGAGTCAGGGGCTaGTCCATCCTTAAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLLAHNVTIWQKNQARWLRVRG*SILKVQ Trigger: CTGGACCTTAAGGATGGAGCAGCCCCTGACTCTGAG...CCACCGAGCCTGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | GACGAACCTTTCCTGCCTTCTGGCCCACAATGTCACGATCTGGCAGAAGAACCAGGAGCTGGGAATGCCTaGGGTGGTCCTCCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DEPFLPSGPQCHDLAEEPGAGNA*GGPPTC Trigger: ACAGGTGGGAGGACCACCCCAGGCATTCCCAGCTCC...TGGTTCTTCTGCCAGATCGTGACATTGTGGGCCAGAAGGCAGGAAAGGTTCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR TCA 90 bp | TCCACTTGTGGGCAAGGAGAGCTGGGGAATTCTGACTGGCAGCCTTCTTGTTCCAGCCCTCCACGTGGCTaGAGAACATGGGTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: STCGQGELGNSDWQPSCSSPPRG*RTWVGR Trigger: TCTTCCCACCCATGTTCTTCAGCCACGTGGAGGGCT...GGAACAAGAAGGCTGCCAGTCAGAATTCCCCAGCTCTCCTTGCCCACAAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR GCA 90 bp | TTAGTTCCTAGTCTTGTGAGTCTGGGACGAACCTTTCCTGCCTTCTGGCCCACAAGGCCTCTGATGAGCTaGCAGAGCCGGGAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVPSLVSLGRTFPAFWPTRPLMS*QSREHL Trigger: CAGGTGCTCCCGGCTCTGGCAGCTCATCAGAGGCCT...TGTGGGCCAGAAGGCAGGAAAGGTTCGTCCCAGACTCACAAGACTAGGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | CTGAAAGGGGCCCCCAGTGTTGTTCTAGGATTCCTCTCCACTTGTGGGCAAGGATGGGAATGCCTGGGGTaGTCCTCCCACCTGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKGAPSVVLGFLSTCGQGWECLG*SSHLSN Trigger: ATTGGACAGGTGGGAGGACCACCCCAGGCATTCCCA...TCCTTGCCCACAAGTGGAGAGGAATCCTAGAACAACACTGGGGGCCCCTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | TTAGTTCCTAGTCTTGTGAGTCTGGGACGAACCTTTCCTGCCTTCTGGCCCACAAGGACCTGCAGGAGCTaGGAATGCCTGGGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVPSLVSLGRTFPAFWPTRTCRS*ECLGWS Trigger: GGACCACCCCAGGCATTCCCAGCTCCTGCAGGTCCT...TGTGGGCCAGAAGGCAGGAAAGGTTCGTCCCAGACTCACAAGACTAGGAACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGATTTGGCAACCACGATCCAGGTTCTCTTTGGGAGATGGGAAAAGCGCTGCAGGAGCTGGGAATaGCTGGGGTGGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSDLATTIQVLFGRWEKRCRSWE*LGWSSH Trigger: GTGGGAGGACCACCCCAGGCATTCCCAGCTCCTGCA...GCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGCCAAATCACTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | CTGAAAGGGGCCCCCAGTGTTGTTCTAGGATTCCTCTCCACTTGTGGGCAAGGAAGCCCTGTGCCCAGATaGTTGAGGAAGACCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGAPSVVLGFLSTCGQGSPVPR*LRKTTL Trigger: CAATGTGGTCTTCCTCAACCATCTGGGCACAGGGCT...TCCTTGCCCACAAGTGGAGAGGAATCCTAGAACAACACTGGGGGCCCCTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CAA 72 bp | AGGCTAGCAGGCAAGAAGACCGGACCCAAATTTTCCTaGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAGKKTGPKFS*LLWREVPASPS Trigger: GGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGTCCGGTCTTCTTGCCTGCTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR GCA 90 bp | TCAGCTGTGAGACTCCTGAGGACGGCTTCCTGTATGCATCAAAGGCATCCCCTGGAGGATCCATATAGCTaGCAAGCTCCGATACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVRLLRTASCMHQRHPLEDPYS*QAPIHS Trigger: GCTGTGTATCGGAGCTTGGCAGCTATATGGATCCTC...CAGGGGATGCCTTTGATGCATACAGGAAGCCGTCCTCAGGAGTCTCACAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CAA 72 bp | AGGCAAGAAGACCGGACCCAAATTTTCCTTGCTGCTTaGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQEDRTQIFLAA*EGSPCISIHPE Trigger: TTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGTCCGGTCTTCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR GCA 90 bp | AACCACGATCCAGGTTCTCTTTGGGAGATGGGAAAAGCGCCAAGGGCAAACTTCCAGCGATGTAATGCTTaGTGGGGTCTGTGCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NHDPGSLWEMGKAPRANFQRCNA*WGLCQQ Trigger: TTGTTGGCACAGACCCCAGCAAGCATTACATCGCTG...GAAGTTTGCCCTTGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| 3UTR CAA 72 bp | GCAGTAGTGATTTGGCAACCACGATCCAGGTTCTCTTaGGGAGATGGGAAAAGCGCCAAGGGCAAACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVVIWQPRSRFS*GDGKSAKGKLH Trigger: GTGAAGTTTGCCCTTGGCGCTTTTCCCATCTCCCAAAGAGAACCTGGATCGTGGTTGCCAAATCACTACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS-3UTR CCA 90 bp | ACCCAAATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCACGATGTAATGCTTGCTaGGGTCTGTGCCAACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TQIFLAALEGSPCISIHPRCNAC*GLCQQH Trigger: ATGTTGTTGGCACAGACCCCAGCAAGCATTACATCG...TGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAATTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS CCA 90 bp | AACAGAGCCAGGCCCAGGACCTGCAGGAGCTGGGAATGCCTGGGGTaGTCCTCCCACCTGTCCAATGTGGTCAGGTGGGCCCGCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NRARPRTCRSWECLG*SSHLSNVVRWARSP Trigger: AGGGCTGCGGGCCCACCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATTCCCAGCTCCTGCAGGTCCTGGGCCTGGCTCTGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS CCA 90 bp | TCAGGAACAGAGCCAGGCCCAGGACCTGCAGGAGCTGGGAATGCCTaGGGTGGTCCTCCCACCTGTCCAATGTGGTCAGGTGGGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGTEPGPGPAGAGNA*GGPPTCPMWSGGPA Trigger: TGCGGGCCCACCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATTCCCAGCTCCTGCAGGTCCTGGGCCTGGCTCTGTTCCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS GCA 90 bp | AAGGTCAGGAACAGAGCCAGGCCCAGGACCTGCAGGAGCTGGGAATaGCTGGGGTGGTCCTCCCACCTGTCCAATGTGGTCAGGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVRNRARPRTCRSWE*LGWSSHLSNVVRWA Trigger: GGCCCACCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATTCCCAGCTCCTGCAGGTCCTGGGCCTGGCTCTGTTCCTGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS CCA 90 bp | GTCCCCAAGGTCAGGAACAGAGCCAGGCCCAGGACCTGCAGGAGCTaGGAATGCCTGGGGTGGTCCTCCCACCTGTCCAATGTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPKVRNRARPRTCRS*ECLGWSSHLSNVVR Trigger: CCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATTCCCAGCTCCTGCAGGTCCTGGGCCTGGCTCTGTTCCTGACCTTGGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS CCA 90 bp | TGGGAATGCCTGGGGTGGTCCTCCCACCTGTCCAATGTGGTCAGGTaGGCCCGCAGCCCTGTGCCCAGATGGTTGAGGAAGACCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: WECLGWSSHLSNVVR*ARSPVPRWLRKTTL Trigger: CAATGTGGTCTTCCTCAACCATCTGGGCACAGGGCTGCGGGCCCACCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS CCA 90 bp | CCCTGGATTGAGCCTCTGCCTGCTTCTCCAGCAGCTGGAAGATGGTaGCCCCAAGCAGTAGGTAGCAGATATAGGCCAGAAGCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PWIEPLPASPAAGRW*PQAVGSRYRPEAGA Trigger: TGCCCCTGCTTCTGGCCTATATCTGCTACCTACTGCTTGGGGCCACCATCTTCCAGCTGCTGGAGAAGCAGGCAGAGGCTCAATCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS CCA 90 bp | GGCCCGCAGCCCTGTGCCCAGATGGTTGAGGAAGACCACATTGAGTaGGATCCCCATCAGAGCATAGAAGACACAGAAGACCTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPQPCAQMVEEDHIE*DPHQSIEDTEDLPC Trigger: GCAGGGCAGGTCTTCTGTGTCTTCTATGCTCTGATGGGGATCCCACTCAATGTGGTCTTCCTCAACCATCTGGGCACAGGGCTGCGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS GCA 90 bp | GCTGGGGGCCAGGTTTCCATAACCTATGGTGGTGACCACTGTGCCTaGAAAGAAGAAGCTGCTCCCGAAGTCCCAGTTGCTGGGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGGQVSITYGGDHCA*KEEAAPEVPVAGIG Trigger: ACCAATCCCAGCAACTGGGACTTCGGGAGCAGCTTCTTCTTTGCAGGCACAGTGGTCACCACCATAGGTTATGGAAACCTGGCCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS CCA 90 bp | CTGCAAAGAAGAAGCTGCTCCCGAAGTCCCAGTTGCTGGGATTGGTaGAGTTGCCTTTGGGGTTCACACCCTTCACCCAGGCTTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQRRSCSRSPSCWDW*SCLWGSHPSPRLPG Trigger: TCCTGGAAGCCTGGGTGAAGGGTGTGAACCCCAAAGGCAACTCCACCAATCCCAGCAACTGGGACTTCGGGAGCAGCTTCTTCTTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS CCA 90 bp | TGCCTGCAAAGAAGAAGCTGCTCCCGAAGTCCCAGTTGCTGGGATTaGTGGAGTTGCCTTTGGGGTTCACACCCTTCACCCAGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLQRRSCSRSPSCWD*WSCLWGSHPSPRLP Trigger: TGGAAGCCTGGGTGAAGGGTGTGAACCCCAAAGGCAACTCCACCAATCCCAGCAACTGGGACTTCGGGAGCAGCTTCTTCTTTGCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS CCA 90 bp | TGTAGTTCTCTAAGAAGCGTAGCTTTTCCAGCTGGAACTGGTCCCTaGATTGAGCCTCTGCCTGCTTCTCCAGCAGCTGGAAGATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSLRSVAFPAGTGP*IEPLPASPAAGRWW Trigger: CCACCATCTTCCAGCTGCTGGAGAAGCAGGCAGAGGCTCAATCCAGGGACCAGTTCCAGCTGGAAAAGCTACGCTTCTTAGAGAACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS-3UTR CAA 90 bp | ATTTTCCTTGCTGCTTTGGAGGGAAGTCCCTGCATCTCCATCCACCCAGAAAAGCCTGTGCCCAGATGGTaGAGGAAGACCACATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IFLAALEGSPCISIHPEKPVPRW*RKTTLS Trigger: ACTCAATGTGGTCTTCCTCAACCATCTGGGCACAGG...CTTTTCTGGGTGGATGGAGATGCAGGGACTTCCCTCCAAAGCAGCAAGGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225596.2 |
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| CDS CCA 72 bp | GGGAATGCCTGGGGTGGTCCTCCCACCTGTCCAATGTaGTCAGGTGGGCCCGCAGCCCTGTGCCCAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GNAWGGPPTCPM*SGGPAALCPDG Trigger: ACCATCTGGGCACAGGGCTGCGGGCCCACCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS GCA 72 bp | GCTGCTCCATCCTTAAGGTCCAGGCCTCTGATGAGCTaGCAGAGCCGGGAGCACCTGTGCAGAAGCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AAPSLRSRPLMS*QSREHLCRSRD Trigger: ATCCCTGCTTCTGCACAGGTGCTCCCGGCTCTGGCAGCTCATCAGAGGCCTGGACCTTAAGGATGGAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS CAA 72 bp | GTGGTCAGGTGGGCCCGCAGCCCTGTGCCCAGATGGTaGAGGAAGACCACATTGAGTGGGATCCCCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VVRWARSPVPRW*RKTTLSGIPIR Trigger: TCTGATGGGGATCCCACTCAATGTGGTCTTCCTCAACCATCTGGGCACAGGGCTGCGGGCCCACCTGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS GCA 72 bp | TGCTCCCGAAGTCCCAGTTGCTGGGATTGGTGGAGTTaGCTTTGGGGTTCACACCCTTCACCCAGGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSRSPSCWDWWS*LWGSHPSPRLP Trigger: TGGAAGCCTGGGTGAAGGGTGTGAACCCCAAAGGCAACTCCACCAATCCCAGCAACTGGGACTTCGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS CCA 72 bp | CTGCAAAGAAGAAGCTGCTCCCGAAGTCCCAGTTGCTaGGATTGGTGGAGTTGCCTTTGGGGTTCACACCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQRRSCSRSPSC*DWWSCLWGSHP Trigger: AGGGTGTGAACCCCAAAGGCAACTCCACCAATCCCAGCAACTGGGACTTCGGGAGCAGCTTCTTCTTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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| CDS CCA 72 bp | CTGCCAAGCTCCGATACACAGCGATGTAATGCTTGCTaGGGTCTGTGCCAACAACATAGTCCCCGAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LPSSDTQRCNAC*GLCQQHSPRSQ Trigger: TTGGCTTCGGGGACTATGTTGTTGGCACAGACCCCAGCAAGCATTACATCGCTGTGTATCGGAGCTTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024155.9 ENSMUST00000225596.2 |
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| CDS CCA 72 bp | CCCTGTGCCCAGATGGTTGAGGAAGACCACATTGAGTaGGATCCCCATCAGAGCATAGAAGACACAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PCAQMVEEDHIE*DPHQSIEDTED Trigger: GTCTTCTGTGTCTTCTATGCTCTGATGGGGATCCCACTCAATGTGGTCTTCCTCAACCATCTGGGCACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024155.9 |
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