Pregenerated sensors for KCNK15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035238Ensembl transcript IDs: ENSMUST00000044798.4, ENSMUST00000109396.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGAAAGGGATGAGAGTCCTAGTGATATATCACCAATGATAGGGTaGGGTCCAGTACGAAACTCATCCCACAGCACTGAGCTGCCTATA | + |
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Preference number: 1 (lower is better) Translates to: QERDESPSDISPMIG*GPVRNSSHSTELPI Trigger: TATAGGCAGCTCAGTGCTGTGGGATGAGTTTCGTACTGGACCCCACCCTATCATTGGTGATATATCACTAGGACTCTCATCCCTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTGCGGGATATCCTGTATCCTCTTCAGAGCAGAAACTAGCCTCTTGTTGCATGGTACACAGATGGTaGCAGGAGCCTCAACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PPAGYPVSSSEQKLASCCMVHRW*QEPQLP Trigger: GGGGAGTTGAGGCTCCTGTCACCATCTGTGTACCAT...GCAACAAGAGGCTAGTTTCTGCTCTGAAGAGGATACAGGATATCCCGCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR GCA 72 bp | CTAAGATGCCTCCACCAGGCTCATGAACATCCTCTGTaGCTGCATCAGGAAGCTGTGCCACTGGTGCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: LRCLHQAHEHPL*LHQEAVPLVPV Trigger: CACGGGCACCAGTGGCACAGCTTCCTGATGCAGGCACAGAGGATGTTCATGAGCCTGGTGGAGGCATCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR GCA 72 bp | GATGCCTCCACCAGGCTCATGAACATCCTCTGTGCCTaGATCAGGAAGCTGTGCCACTGGTGCCCGTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: DASTRLMNILCA*IRKLCHWCPCK Trigger: TTTACACGGGCACCAGTGGCACAGCTTCCTGATGCAGGCACAGAGGATGTTCATGAGCCTGGTGGAGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR CCA 72 bp | AACATCCTCTGTGCCTGCATCAGGAAGCTGTGCCACTaGTGCCCGTGTAAAGCAGGCTCTTCAGAAGCACCC | + |
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Preference number: 3 (lower is better) Translates to: NILCACIRKLCH*CPCKAGSSEAP Trigger: GGGTGCTTCTGAAGAGCCTGCTTTACACGGGCACCAGTGGCACAGCTTCCTGATGCAGGCACAGAGGATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR GCA 72 bp | CTCATGAACATCCTCTGTGCCTGCATCAGGAAGCTGTaGCACTGGTGCCCGTGTAAAGCAGGCTCTTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LMNILCACIRKL*HWCPCKAGSSE Trigger: TTCTGAAGAGCCTGCTTTACACGGGCACCAGTGGCACAGCTTCCTGATGCAGGCACAGAGGATGTTCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTCTTCAGAAGCACCCTGTTCTACTGAAGGGGAAGCTAAGGCCCAGGAAAGCAGAAACTAGCCTCTaGTTGCCTTGTGAAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: QALQKHPVLLKGKLRPRKAETSL*LPCEGP Trigger: GGGTCCTTCACAAGGCAACAAGAGGCTAGTTTCTGC...TTTCCTGGGCCTTAGCTTCCCCTTCAGTAGAACAGGGTGCTTCTGAAGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR GCA 72 bp | GGTCTTTTAAGTGGTGAGCTCTCTAGGATGCTAAGATaGCTCCACCAGGCTCATGAACATCCTCTGTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GLLSGELSRMLR*LHQAHEHPLCL Trigger: CAGGCACAGAGGATGTTCATGAGCCTGGTGGAGGCATCTTAGCATCCTAGAGAGCTCACCACTTAAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR CCA 72 bp | GATGAGAGTCCTAGTGATATATCACCAATGATAGGGTaGGGTCCAGTACGAAACTCATCCCACAGCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: DESPSDISPMIG*GPVRNSSHSTE Trigger: CTCAGTGCTGTGGGATGAGTTTCGTACTGGACCCCACCCTATCATTGGTGATATATCACTAGGACTCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR TCA 72 bp | TTTCATATATATCTAGAAGGGATGGTACACAGATGGTaGCAGGAGCCTCAACTCCCCTCCAAGCCCGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: FHIYLEGMVHRW*QEPQLPSKPER Trigger: TCTTTCGGGCTTGGAGGGGAGTTGAGGCTCCTGTCACCATCTGTGTACCATCCCTTCTAGATATATATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR GCA 72 bp | GTAGAATTCTGGTGTTTAAAGTCATACCTCTCCCCCTaGGGGATATCCTGTATCCTCTTCAGAGCAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: VEFWCLKSYLSP*GISCILFRAET Trigger: AGTTTCTGCTCTGAAGAGGATACAGGATATCCCGCAGGGGGAGAGGTATGACTTTAAACACCAGAATTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | GTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGCACCTAGGGCCAGGGTaGCTGCGCAGAGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VGLLTGGARHWPGLARVGHLGPG*LRRAAA Trigger: GGCTGCTGCTCTGCGCAGCCACCCTGGCCCTAGGTG...CCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR GCA 90 bp | AGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTATTCTCAGCAGAGACGTaGGGCCGCCGCAGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RVGLLTGGARHWPGLARVFSAET*GRRRPR Trigger: CCTGGGCCTGCGGCGGCCGCACGTCTCTGCTGAGAA...TACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGCACCTAGGGCCAGGGTaGCTGCGCAGAGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RRVGLLTGGARHWPGLARHLGPG*LRRAAA Trigger: GGCTGCTGCTCTGCGCAGCCACCCTGGCCCTAGGTG...CCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | GGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGGGCCCAGGCAGCGCTTaGCTGTCAGCAGCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: GLLTGGARHWPGLARVGKGPGSA*LSAADT Trigger: GGTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCC...CTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGCCAGGCTCTGGAAGGTaGCCAGCGTCAGGGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: RRVGLLTGGARHWPGLARPGSGR*PASGVC Trigger: GCATACCCCTGACGCTGGTCACCTTCCAGAGCCTGG...CCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR TCA 90 bp | TTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGGACCCAGGCTCTGGAAGGTaGCCAGCGTCAGGGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: LLTGGARHWPGLARVGKDPGSGR*PASGVC Trigger: GCATACCCCTGACGCTGGTCACCTTCCAGAGCCTGG...GTCCTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGGGCTGCTGTGGCAATaGTGCGTGGCTTCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RRVGLLTGGARHWPGLARGLLWQ*CVASGL Trigger: GAGCCCAGAAGCCACGCATCATTGCCACAGCAGCCC...CCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | TTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGGACAGTGCGCGAAGGCAATaGCACCTAGGGCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLTGGARHWPGLARVGKDSARRQ*HLGPGW Trigger: CCACCCTGGCCCTAGGTGCCATTGCCTTCGCGCACT...GTCCTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTCCAGCCCTCGAAGTaGGCGAAGGCAATGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: RRVGLLTGGARHWPGLARVQPSK*AKAMAP Trigger: AGGTGCCATTGCCTTCGCGCACTTCGAGGGCTGGAC...CCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | TTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGGACGGCTCGGGGTCTGTCTaGGCTGCTGTGGCAATGATG | + |
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Preference number: 4 (lower is better) Translates to: LLTGGARHWPGLARVGKDGSGSV*AAVAMM Trigger: CATCATTGCCACAGCAGCCCAGACAGACCCCGAGCC...GTCCTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | TCTAGGATGCTAAGATGCCTCCACCAGGCTCATGAACATCCTCTGTGCCTGCATGGCCCAGGCAGCGCTTaGCTGTCAGCAGCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SRMLRCLHQAHEHPLCLHGPGSA*LSAADT Trigger: GGTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCC...ATGCAGGCACAGAGGATGTTCATGAGCCTGGTGGAGGCATCTTAGCATCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| CDS-3UTR CCA 90 bp | CCCGAAAGAAGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGGCTCGGGGTCTGTCTaGGCTGCTGTGGCAATGATG | + |
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Preference number: 4 (lower is better) Translates to: PERRVGLLTGGARHWPGLGSGSV*AAVAMM Trigger: CATCATTGCCACAGCAGCCCAGACAGACCCCGAGCC...TAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCTTCTTTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| 3UTR CAA 72 bp | CCTCAACTCCCCTCCAAGCCCGAAAGAAGGGTGGGTTaGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: PQLPSKPERRVG*LTGGARHWPGL Trigger: TAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCTTCTTTCGGGCTTGGAGGGGAGTTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| CDS-3UTR GCA 90 bp | GTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGGGAGGGCATAGAACATaGAGAACACTTTGCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: VGLLTGGARHWPGLARVGGGHRT*RTLCPS Trigger: ACTCGGGCAAAGTGTTCTGCATGTTCTATGCCCTCC...CCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR GCA 90 bp | AGGGTGGGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGAGGGCATAGAACATaGAGAACACTTTGCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: RVGLLTGGARHWPGLARVGGHRT*RTLCPS Trigger: ACTCGGGCAAAGTGTTCTGCATGTTCTATGCCCTCC...TACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACCCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR GCA 90 bp | CTATATAGTGCAAAATTTTCCATAAATTCCCTTCACCCTGTCCATCTCCGTGCTTTCTCAGCAGAGACGTaGGGCCGCCGCAGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LYSAKFSINSLHPVHLRAFSAET*GRRRPR Trigger: CCTGGGCCTGCGGCGGCCGCACGTCTCTGCTGAGAA...AGCACGGAGATGGACAGGGTGAAGGGAATTTATGGAAAATTTTGCACTATATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| CDS GCA 90 bp | GGCGCTCCAGCTCGCGGTAGTCGTCGGCGGAGAAGCGGTACTTTCTaGGGAACTCGCCCCGCTTCCGAGCCAGCAGCCGCTGCCGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GAPARGSRRRRSGTF*GTRPASEPAAAAGC Trigger: GCAGCCGGCAGCGGCTGCTGGCTCGGAAGCGGGGCGAGTTCCGCAGAAAGTACCGCTTCTCCGCCGACGACTACCGCGAGCTGGAGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS GCA 90 bp | GCGCAGAGCAGCAGCCCGGCCACCACCATGTTCTCAGCAGAGACGTaGGGCCGCCGCAGGCCCAGGCAGCGCTTGGCTGTCAGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: AQSSSPATTMFSAET*GRRRPRQRLAVSSR Trigger: TCTGCTGCTGACAGCCAAGCGCTGCCTGGGCCTGCGGCGGCCGCACGTCTCTGCTGAGAACATGGTGGTGGCCGGGCTGCTGCTCTGCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS GCA 90 bp | TTCTGCGGAACTCGCCCCGCTTCCGAGCCAGCAGCCGCTGCCGGCTaGGCTCCGCCTCGGATTCCAGCGCATCGAAAACAGCGGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: FCGTRPASEPAAAAG*APPRIPAHRKQRHP Trigger: TGGGTGCCGCTGTTTTCGATGCGCTGGAATCCGAGGCGGAGCGCAGCCGGCAGCGGCTGCTGGCTCGGAAGCGGGGCGAGTTCCGCAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS GCA 90 bp | CGGTACTTTCTGCGGAACTCGCCCCGCTTCCGAGCCAGCAGCCGCTaGCGGCTGCGCTCCGCCTCGGATTCCAGCGCATCGAAAACAGCG | + |
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Preference number: 5 (lower is better) Translates to: RYFLRNSPRFRASSR*RLRSASDSSASKTA Trigger: CGCTGTTTTCGATGCGCTGGAATCCGAGGCGGAGCGCAGCCGGCAGCGGCTGCTGGCTCGGAAGCGGGGCGAGTTCCGCAGAAAGTACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS CCA 90 bp | TCCAGCCCTCGAAGTGCGCGAAGGCAATGGCACCTAGGGCCAGGGTaGCTGCGCAGAGCAGCAGCCCGGCCACCACCATGTTCTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSPRSARRQWHLGPG*LRRAAARPPPCSQQ Trigger: CTGCTGAGAACATGGTGGTGGCCGGGCTGCTGCTCTGCGCAGCCACCCTGGCCCTAGGTGCCATTGCCTTCGCGCACTTCGAGGGCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS CCA 90 bp | TGTTCTCAGCAGAGACGTGCGGCCGCCGCAGGCCCAGGCAGCGCTTaGCTGTCAGCAGCAGACACCGCACCAGTGTGTTTAGACGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: CSQQRRAAAAGPGSA*LSAADTAPVCLDAR Trigger: GCGAGCGTCTAAACACACTGGTGCGGTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCCTGCGGCGGCCGCACGTCTCTGCTGAGAACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CAA 90 bp | GGTTTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGAGGCCCAGGCAGCGCTaGGCTGTCAGCAGCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: GLLTGGARHWPGLARVGKRPRQR*AVSSRH Trigger: GTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCCT...CTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CAA 90 bp | TTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGGACCGCAGGACCACCAGGTaGAGGAAGGCACCGATGACC | + |
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Preference number: 5 (lower is better) Translates to: LLTGGARHWPGLARVGKDRRTTR*RKAPMT Trigger: GGTCATCGGTGCCTTCCTCAACCTGGTGGTCCTGCG...GTCCTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CAA 90 bp | TTGCTAACAGGAGGAGCTAGACATTGGCCAGGCCTAGCCAGGGTAGGGAAGGACAACATGCAGAACACTTaGCCCGAGTCCGTGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LLTGGARHWPGLARVGKDNMQNT*PESVPG Trigger: GCCGGGCACGGACTCGGGCAAAGTGTTCTGCATGTT...GTCCTTCCCTACCCTGGCTAGGCCTGGCCAATGTCTAGCTCCTCCTGTTAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS-3UTR CAA 90 bp | CTGTGCCACTGGTGCCCGTGTAAAGCAGGCTCTTCAGAAGCACCCTGTTCTACTAACATGCAGAACACTTaGCCCGAGTCCGTGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LCHWCPCKAGSSEAPCSTNMQNT*PESVPG Trigger: GCCGGGCACGGACTCGGGCAAAGTGTTCTGCATGTT...AGTAGAACAGGGTGCTTCTGAAGAGCCTGCTTTACACGGGCACCAGTGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| CDS-3UTR CAA 90 bp | TCTAGGATGCTAAGATGCCTCCACCAGGCTCATGAACATCCTCTGTGCCTGCATAGGCCCAGGCAGCGCTaGGCTGTCAGCAGCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: SRMLRCLHQAHEHPLCLHRPRQR*AVSSRH Trigger: GTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCCT...ATGCAGGCACAGAGGATGTTCATGAGCCTGGTGGAGGCATCTTAGCATCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109396.2 |
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| CDS GCA 72 bp | CTGCGGAACTCGCCCCGCTTCCGAGCCAGCAGCCGCTaGCGGCTGCGCTCCGCCTCGGATTCCAGCGCATCG | + |
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Preference number: 6 (lower is better) Translates to: LRNSPRFRASSR*RLRSASDSSAS Trigger: CGATGCGCTGGAATCCGAGGCGGAGCGCAGCCGGCAGCGGCTGCTGGCTCGGAAGCGGGGCGAGTTCCGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS CCA 72 bp | AGGTCTCCAGCTGATGGAAGGGGTAGGGGATGCAGGTaGAGGCGCCGGCGCGGACGCGGCTCTCGGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSPADGRGRGCR*RRRRGRGSRAP Trigger: GGGCGCCCGAGAGCCGCGTCCGCGCCGGCGCCTCCACCTGCATCCCCTACCCCTTCCATCAGCTGGAGACCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS GCA 72 bp | CGCTCTGCTTCCTCATCGCGGCTCTCCCGCTCCGAGTaGCGGTTTCCGTGCGCCCCGACGGCTCCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSASSSRLSRSE*RFPCAPTAPAP Trigger: TGGAGCTGGAGCCGTCGGGGCGCACGGAAACCGGCACTCGGAGCGGGAGAGCCGCGATGAGGAAGCAGAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044798.4 |
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| CDS GCA 72 bp | AGGATGCACAGAATGAGCGCCGCCGTGCGCGCGCTCTaGTTCCTCATCGCGGCTCTCCCGCTCCGAGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RMHRMSAAVRAL*FLIAALPLRVP Trigger: CGGCACTCGGAGCGGGAGAGCCGCGATGAGGAAGCAGAGCGCGCGCACGGCGGCGCTCATTCTGTGCATCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044798.4 |
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| CDS GCA 72 bp | ACTCGCCCCGCTTCCGAGCCAGCAGCCGCTGCCGGCTaGGCTCCGCCTCGGATTCCAGCGCATCGAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: TRPASEPAAAAG*APPRIPAHRKQ Trigger: CTGTTTTCGATGCGCTGGAATCCGAGGCGGAGCGCAGCCGGCAGCGGCTGCTGGCTCGGAAGCGGGGCGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS GCA 72 bp | GCTCGCGGTAGTCGTCGGCGGAGAAGCGGTACTTTCTaGGGAACTCGCCCCGCTTCCGAGCCAGCAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ARGSRRRRSGTF*GTRPASEPAAA Trigger: AGCGGCTGCTGGCTCGGAAGCGGGGCGAGTTCCGCAGAAAGTACCGCTTCTCCGCCGACGACTACCGCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS CCA 72 bp | CAGAGACGTGCGGCCGCCGCAGGCCCAGGCAGCGCTTaGCTGTCAGCAGCAGACACCGCACCAGTGTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: QRRAAAAGPGSA*LSAADTAPVCL Trigger: TAAACACACTGGTGCGGTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCCTGCGGCGGCCGCACGTCTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS GCA 72 bp | CCAGCGTCAGGGGTATGCCCAGGAGGGCATAGAACATaGAGAACACTTTGCCCGAGTCCGTGCCCGGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: PASGVCPGGHRT*RTLCPSPCPAR Trigger: CCGCGCCGGGCACGGACTCGGGCAAAGTGTTCTGCATGTTCTATGCCCTCCTGGGCATACCCCTGACGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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| CDS CAA 90 bp | ATGTTCTCAGCAGAGACGTGCGGCCGCCGCAGGCCCAGGCAGCGCTaGGCTGTCAGCAGCAGACACCGCACCAGTGTGTTTAGACGCTCG | + |
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Preference number: 6 (lower is better) Translates to: MFSAETCGRRRPRQR*AVSSRHRTSVFRRS Trigger: CGAGCGTCTAAACACACTGGTGCGGTGTCTGCTGCTGACAGCCAAGCGCTGCCTGGGCCTGCGGCGGCCGCACGTCTCTGCTGAGAACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044798.4 ENSMUST00000109396.2 |
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