Pregenerated sensors for KCNK12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050138Ensembl transcript IDs: ENSMUST00000055221.9
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCGCAGCCCCGGCCCGGGCAGCAGCGCGTaGAGCAGCGGCAGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: APSRREVKQTRPAARSPGPGSSA*SSGSSA Trigger: AGCTGAGCTGCCGCTGCTGCACGCGCTGCTGCCCGG...GCCGGGGCTGCGCGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CCA 90 bp | GCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCGCAGCCCCGGCTGCGCGGGTAGCCGTTaGCCGTCTCGGACAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: APSRREVKQTRPAARSPGCAGSR*PSRTAA Trigger: AGCAGCTGTCCGAGACGGCCAACGGCTACCCGCGCA...GCCGGGGCTGCGCGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CCA 90 bp | GCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCGCAGCCCCGGCGCGCAGAGAACACGGTaGCACCCGCCACCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: APSRREVKQTRPAARSPGAQRTR*HPPPGR Trigger: TCTACCTGGTGGCGGGTGCCACCGTGTTCTCTGCGC...GCCGGGGCTGCGCGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR GCA 90 bp | GCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCGCAGCCCCGGCTGGCTGGTGTTGTCATaGCGAAACCTATGGTCGACA | + |
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Preference number: 4 (lower is better) Translates to: APSRREVKQTRPAARSPGWLVLS*RNLWST Trigger: TGTCGACCATAGGTTTCGGCATGACAACACCAGCCA...GCCGGGGCTGCGCGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | AAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCCAGCCGGTTGTTCATaGTGCCCAGCGCGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: KIKKAPSRREVKQTRPAAPAGCS*CPARPR Trigger: GCGTGGGCGCGCTGGGCATCATGAACAACCGGCTGG...CGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR GCA 90 bp | AAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGGCCGTCTCGGACAGCTaGTTCTGCAGCAGCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KIKKAPSRREVKQTRPAAAVSDS*FCSSAS Trigger: GCTGGCGCTGCTGCAGAAGCAGCTGTCCGAGACGGC...CGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | ATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGGCCGGTGTCCTCGTTaGGGTGCGAGCGGCGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: IKIKKAPSRREVKQTRPAGRCPR*GASGGN Trigger: GTTGCCGCCGCTCGCACCTCAACGAGGACACCGGCC...CGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | ATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGCCAGGTAGAGGCCGATaGGCGCCGCCAGCAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: IKIKKAPSRREVKQTRPAPGRGR*APPAAR Trigger: TCGTGCTGCTGGCGGCGCTCATCGGCCTCTACCTGG...CGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | AAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGACACGCCGAGCAGGATaGAGAGGAAGTTGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KIKKAPSRREVKQTRPAATRRAG*RGSCPG Trigger: GCCTGGGCAACTTCCTCTTCATCCTGCTCGGCGTGT...CGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR GCA 90 bp | TGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGGCTCCGCCACGCCGTaGGCAGCGCTGAAGTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: WIKIKKAPSRREVKQTRPGSATP*AALKLR Trigger: GCGCAACTTCAGCGCTGCGCACGGCGTGGCGGAGCC...CGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CCA 90 bp | AAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCCTTCCCGCCCACTGTaGCTGGTGTTGTCATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: KIKKAPSRREVKQTRPAAPSRPL*LVLSCR Trigger: TCGGCATGACAACACCAGCCACAGTGGGCGGGAAGG...CGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCGCCGGGAGCCCGGGGTaGTGGCGTTGCGCCGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: YWIKIKKAPSRREVKQTRAGSPG*WRCAGL Trigger: TAGCCCGGCGCAACGCCATCACCCCGGGCTCCCGGC...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | ATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGCGTTCTGTCGCGTGTTaGCGCACACGCTGCGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: IKIKKAPSRREVKQTRPARSVAC*RTRCAG Trigger: ACCCGCGCAGCGTGTGCGTCAACACGCGACAGAACG...CGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCGCCGTGCGCAGCGCTaGAGTTGCGCAGCGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: YWIKIKKAPSRREVKQTRRRAQR*SCAAWR Trigger: GCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCG...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR GCA 90 bp | TGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGAGGCGGCGTGTTGGCTaGTCACCAGGTCCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: WIKIKKAPSRREVKQTRPRRRVG*SPGPRS Trigger: GCTTCGGGGACCTGGTGAGCAGCCAACACGCCGCCT...CGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CCA 90 bp | ATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGCCACGCTGGTGTACATaGCCGAGGCGCAACAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IKIKKAPSRREVKQTRPAPRWCT*PRRNRP Trigger: TGGCCTGTTGCGCCTCGGCCATGTACACCAGCGTGG...CGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR GCA 90 bp | TGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGTCGGACAGCTGCTTCTaGAGCAGCGCCAGCGACACC | + |
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Preference number: 4 (lower is better) Translates to: WIKIKKAPSRREVKQTRPSDSCF*SSASDT Trigger: GGTGTCGCTGGCGCTGCTGCAGAAGCAGCTGTCCGA...CGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCACAGTCCGTAGGCGATaGGGAAGGCCTTCCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YWIKIKKAPSRREVKQTRTVRRR*GRPSRP Trigger: TGGGCGGGAAGGCCTTCCTCATCGCCTACGGACTGT...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | TGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGAGGCCAGCAGCGAGATaGTGCGCTCTAGAAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WIKIKKAPSRREVKQTRPRPAAR*CALERG Trigger: ACCTCTTTCTAGAGCGCATCATCTCGCTGCTGGCCT...CGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCGAACAGGCCCAGGATaGGCAGCACGTGGTACACCG | + |
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Preference number: 4 (lower is better) Translates to: YWIKIKKAPSRREVKQTRRTGPG*AARGTP Trigger: CGGTGTACCACGTGCTGCTCATCCTGGGCCTGTTCG...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CCA 90 bp | TGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGTCATGCCGAAACCTATaGTCGACACCACGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: WIKIKKAPSRREVKQTRPSCRNL*STPRCP Trigger: TGGGCACCGTGGTGTCGACCATAGGTTTCGGCATGA...CGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR TCA 90 bp | TGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCTCTAGAAAGAGGTTaGAGAACAAGATGGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: WIKIKKAPSRREVKQTRPALERG*RTRWSP Trigger: CGGGGACCATCTTGTTCTTCAACCTCTTTCTAGAGC...CGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR GCA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCATCCAGTTGAGCACCTaGTTGATGAGGATGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: YWIKIKKAPSRREVKQTRIQLST*LMRMEM Trigger: CATCTCCATCCTCATCAAGCAGGTGCTCAACTGGAT...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CCA 90 bp | CCGCCAGGCTGTCGGCCTCCGACAGCGCCGAGCCGCGGCGGAAGGTaGCGGGCAGCAGGCCACTGCGGCGCAGCTGGCGCTCCCGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PPGCRPPTAPSRGGR*RAAGHCGAAGAPGR Trigger: CCTGCCGGGAGCGCCAGCTGCGCCGCAGTGGCCTGCTGCCCGCCACCTTCCGCCGCGGCTCGGCGCTGTCGGAGGCCGACAGCCTGGCGG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS TCA 90 bp | GGAGGAAGGCGCGCAGCTCGGGCTCCGCCACGCCGTGCGCAGCGCTaGAGTTGCGCAGCGTGGCGCCCCAGCGCGCCCGCGCCTCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: GGRRAARAPPRRAQR*SCAAWRPSAPAPPP Trigger: AGGCGGAGGCGCGGGCGCGCTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCGGAGCCCGAGCTGCGCGCCTTCCTCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS TCA 90 bp | TGCCCAGCGCGCCCACGCCGCCCGAGAAGCCGTTCTGTCGCGTGTTaGCGCACACGCTGCGCGGGTAGCCGTTGGCCGTCTCGGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: CPARPRRPRSRSVAC*RTRCAGSRWPSRTA Trigger: AGCTGTCCGAGACGGCCAACGGCTACCCGCGCAGCGTGTGCGTCAACACGCGACAGAACGGCTTCTCGGGCGGCGTGGGCGCGCTGGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | GCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGCGCAGCCCCGGCCAGCGGCAGCTCAGCTaGCGCAGCATCCAGTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: APSRREVKQTRPAARSPGQRQLS*RSIQLS Trigger: GCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTG...GCCGGGGCTGCGCGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CCA 90 bp | AGTAGAGCGAGTCCACGTAGTCCCAGCCTTCCACGCTGGTGTACATaGCCGAGGCGCAACAGGCCAGCAGCACGGCGAACAGGCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SRASPRSPSLPRWCT*PRRNRPAARRTGPG Trigger: TCCTGGGCCTGTTCGCCGTGCTGCTGGCCTGTTGCGCCTCGGCCATGTACACCAGCGTGGAAGGCTGGGACTACGTGGACTCGCTCTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | AAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGGCGAGCGCCAGCGACACCTaGTTGGACGCCGTGAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: KIKKAPSRREVKQTRPAASASDT*LDAVRS Trigger: CGACCTCACGGCGTCCAACAAGGTGTCGCTGGCGCT...CGCCGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGTGCGCAGCGCTGAAGTaGCGCAGCGTGGCGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: IKIKKAPSRREVKQTRPACAALK*RSVAPQ Trigger: CTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCA...CGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCGGCCGGTGTCCTCGTaGAGGTGCGAGCGGCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: YWIKIKKAPSRREVKQTRRPVSS*RCERRQ Trigger: TTGCCGCCGCTCGCACCTCAACGAGGACACCGGCCG...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCGCCAGCGACACCTTGTaGGACGCCGTGAGGTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: YWIKIKKAPSRREVKQTRASDTL*DAVRSR Trigger: GCGCGACCTCACGGCGTCCAACAAGGTGTCGCTGGC...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGTTCTGTCGCGTGTaGACGCACACGCTGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: YWIKIKKAPSRREVKQTRPFCRV*THTLRG Trigger: CCCGCGCAGCGTGTGCGTCAACACGCGACAGAACGG...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCGGCGCGCTCTAGAAAGAGGTaGAAGAACAAGATGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: IKIKKAPSRREVKQTRPARSRKR*KNKMVP Trigger: GGGGACCATCTTGTTCTTCAACCTCTTTCTAGAGCG...CGCCGGGCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCCACTGTGGCTGGTGTaGTCATGCCGAAACCTATGG | + |
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Preference number: 5 (lower is better) Translates to: YWIKIKKAPSRREVKQTRPLWLV*SCRNLW Trigger: CCATAGGTTTCGGCATGACAACACCAGCCACAGTGG...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS-3UTR CAA 90 bp | TATTGGATAAAGATTAAGAAAGCGCCATCTCGGAGAGAAGTGAAGCAAACCCGCCAGTTGAGCACCTGCTaGATGAGGATGGAGATGACG | + |
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Preference number: 5 (lower is better) Translates to: YWIKIKKAPSRREVKQTRQLSTC*MRMEMT Trigger: CGTCATCTCCATCCTCATCAAGCAGGTGCTCAACTG...GCGGGTTTGCTTCACTTCTCTCCGAGATGGCGCTTTCTTAATCTTTATCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS GCA 72 bp | CGGAGGAAGGCGCGCAGCTCGGGCTCCGCCACGCCGTaGGCAGCGCTGAAGTTGCGCAGCGTGGCGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRKARSSGSATP*AALKLRSVAPQ Trigger: CTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCGGAGCCCGAGCTGCGCGCCTTCCTCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CCA 72 bp | CGGAAGGTGGCGGGCAGCAGGCCACTGCGGCGCAGCTaGCGCTCCCGGCAGGCGCGCATGATGAAGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RKVAGSRPLRRS*RSRQARMMKAS Trigger: GCTGGCCTTCATCATGCGCGCCTGCCGGGAGCGCCAGCTGCGCCGCAGTGGCCTGCTGCCCGCCACCTTCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS TCA 72 bp | CGCCCACGCCGCCCGAGAAGCCGTTCTGTCGCGTGTTaGCGCACACGCTGCGCGGGTAGCCGTTGGCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: RPRRPRSRSVAC*RTRCAGSRWPS Trigger: AGACGGCCAACGGCTACCCGCGCAGCGTGTGCGTCAACACGCGACAGAACGGCTTCTCGGGCGGCGTGGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CAA 72 bp | AGCGCCGCCAGCAGCACGAAGCGGCCGGTGTCCTCGTaGAGGTGCGAGCGGCGGCAACAGCAGCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SAASSTKRPVSS*RCERRQQQQQQ Trigger: CTGCTGCTGCTGCTGTTGCCGCCGCTCGCACCTCAACGAGGACACCGGCCGCTTCGTGCTGCTGGCGGCGCT 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS TCA 72 bp | AGAACACGGTGGCACCCGCCACCAGGTAGAGGCCGATaGGCGCCGCCAGCAGCACGAAGCGGCCGGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RTRWHPPPGRGR*APPAARSGRCP Trigger: AGGACACCGGCCGCTTCGTGCTGCTGGCGGCGCTCATCGGCCTCTACCTGGTGGCGGGTGCCACCGTGTTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CAA 90 bp | GCGCCGGGAGCCGGGCAGCAGCGCGTGCAGCAGCGGCAGCTCAGCTaGCGCAGCATCCAGTTGAGCACCTGCTTGATGAGGATGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: APGAGQQRVQQRQLS*RSIQLSTCLMRMEM Trigger: CATCTCCATCCTCATCAAGCAGGTGCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTGCTGCACGCGCTGCTGCCCGGCTCCCGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CAA 72 bp | GCCGGGCAGCAGCGCGTGCAGCAGCGGCAGCTCAGCTaGCGCAGCATCCAGTTGAGCACCTGCTTGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: AGQQRVQQRQLS*RSIQLSTCLMR Trigger: CCTCATCAAGCAGGTGCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTGCTGCACGCGCTGCTGCCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS TCA 72 bp | AGATGGTCCCCGCGCAGCCGAACAGTCCGTAGGCGATaGGGAAGGCCTTCCCGCCCACTGTGGCTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RWSPRSRTVRRR*GRPSRPLWLVL Trigger: CAACACCAGCCACAGTGGGCGGGAAGGCCTTCCTCATCGCCTACGGACTGTTCGGCTGCGCGGGGACCATCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CCA 72 bp | AGTCCACGTAGTCCCAGCCTTCCACGCTGGTGTACATaGCCGAGGCGCAACAGGCCAGCAGCACGGCGAACA | + |
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Preference number: 6 (lower is better) Translates to: SPRSPSLPRWCT*PRRNRPAARRT Trigger: TGTTCGCCGTGCTGCTGGCCTGTTGCGCCTCGGCCATGTACACCAGCGTGGAAGGCTGGGACTACGTGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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| CDS CCA 72 bp | GTAGGCGATGAGGAAGGCCTTCCCGCCCACTGTGGCTaGTGTTGTCATGCCGAAACCTATGGTCGACACCAC | + |
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Preference number: 6 (lower is better) Translates to: VGDEEGLPAHCG*CCHAETYGRHH Trigger: GTGGTGTCGACCATAGGTTTCGGCATGACAACACCAGCCACAGTGGGCGGGAAGGCCTTCCTCATCGCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055221.9 |
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