Pregenerated sensors for KCNK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033998Ensembl transcript IDs: ENSMUST00000046765.10, ENSMUST00000212831.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGAGGTGGGTAGAAATGGTGGTATGCCCTCCAGACCTGTGAAGTaGGTAGAAGTGGTGGTATGCCTTCCAGTCCAAATAGATTCACCT | + |
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Preference number: 1 (lower is better) Translates to: CEVGRNGGMPSRPVK*VEVVVCLPVQIDSP Trigger: AGGTGAATCTATTTGGACTGGAAGGCATACCACCACTTCTACCCACTTCACAGGTCTGGAGGGCATACCACCATTTCTACCCACCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| 3UTR GCA 90 bp | TTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTaGAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGAT | + |
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Preference number: 1 (lower is better) Translates to: FSPTLFLTCCLVLHR*KRVEMYTGTEYRTD Trigger: ATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| 3UTR CAA 90 bp | CTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTaGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGA | + |
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Preference number: 2 (lower is better) Translates to: LLTNSLPHLLSGPTP*QEGRNVYRNRISYR Trigger: TCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| 3UTR CAA 90 bp | AGGGTAGAAATGTATACAGGAACAGAATATCGTACCGATTTTCTCTaGAGTTTGTTAGGCCTCCCAGCTTGTGGTAGCAATTCTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: RVEMYTGTEYRTDFL*SLLGLPACGSNSGF Trigger: GAACCCAGAATTGCTACCACAAGCTGGGAGGCCTAACAAACTCAAGAGAAAATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| 3UTR-3UTR GCA 90 bp | GTTACATATAAAATCTGCCTCCGCCTACTGCAGTACACTGTTTCAAGTATTCGTGGTGCATACCTCATTTaGCCAGGGATTAAAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: VTYKICLRLLQYTVSSIRGAYLI*PGIKTH Trigger: GTGGGTTTTAATCCCTGGGCAAATGAGGTATGCACC...ACGAATACTTGAAACAGTGTACTGCAGTAGGCGGAGGCAGATTTTATATGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| 3UTR-3UTR GCA 90 bp | CAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACTTTTGGATAGGCACATaGAAGCCAGGACACTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: QIDSPSHQLSSSLVVWSYFWIGT*KPGHLN Trigger: GTTTAAGTGTCCTGGCTTGCATGTGCCTATCCAAAA...GTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| 3UTR-3UTR CCA 90 bp | CACCGTTGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGATTTTTATGTACACAGTGGATaGTGGCCTATTCATTATAAA | + |
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Preference number: 2 (lower is better) Translates to: HRCKRVEMYTGTEYRTDFYVHSG*WPIHYK Trigger: TTTATAATGAATAGGCCACCATCCACTGTGTACATA...AAAATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| 3UTR GCA 72 bp | CCCTCCAGACCTGTGAAGTGGGTAGAAGTGGTGGTATaGCTTCCAGTCCAAATAGATTCACCTTCTCACCAA | + |
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Preference number: 3 (lower is better) Translates to: PSRPVKWVEVVV*LPVQIDSPSHQ Trigger: TTGGTGAGAAGGTGAATCTATTTGGACTGGAAGGCATACCACCACTTCTACCCACTTCACAGGTCTGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACGTACCGATTTTCTCTaGAGTTTGTTAGGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PNRFTFSPTLFLTCCLVLRTDFL*SLLGLP Trigger: TGGGAGGCCTAACAAACTCAAGAGAAAATCGGTACG...TAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| 3UTR GCA 72 bp | ACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTaGAAGAGGGTAGAAATGTATACAGGAACAGAATAT | + |
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Preference number: 3 (lower is better) Translates to: TLFLTCCLVLHR*KRVEMYTGTEY Trigger: ATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGCGCACGCACGAGCTaGCGGCCAGGGACTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSHQLSSSLVVWSYTVARGARTS*RPGTAA Trigger: TGCTGCAGTCCCTGGCCGGCAGCTCGTGCGTGCGCC...TCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | TCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGTAGGCTTTGCCCCCATCTaGCAGGGGCACCGTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPTLFLTCCLVLHRCKRVGFAPI*QGHRVA Trigger: GGCCACACGGTGCCCCTGTCAGATGGGGGCAAAGCC...TACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGTGTATGGCACCAGGTGATCACATCTCCTATGAGTTACAGGTGCATACCTCCGACAGGCACTCGTaGTCCTCCAGGAAGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PQCMAPGDHISYELQVHTSDRHS*SSRKRR Trigger: GCGGCGCTTCCTGGAGGAGCACGAGTGCCTGTCGGA...GGTATGCACCTGTAACTCATAGGAGATGTGATCACCTGGTGCCATACACTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR GCA 90 bp | ACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGACGCGGCCCAGGAACTaGTCCAGCTGCGGCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: TFSPTLFLTCCLVLHRCKTRPRN*SSCGSD Trigger: GTCGGAGCCGCAGCTGGAGCAGTTCCTGGGCCGCGT...CTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | ATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCCACCAGGCCGAACGGTaGCGCTCCACCAGGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: IDSPSHQLSSSLVVWSYTHQAER*RSTRRT Trigger: CGTGCGCCTGGTGGAGCGGCACCGTTCGGCCTGGTG...GGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAAGCGCCGCTTCAGCTTaGGCAGCTCCTGGCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSHQLSSSLVVWSYTVARSAASA*AAPGAA Trigger: TGCTGCGCCAGGAGCTGCGCAAGCTGAAGCGGCGCT...TCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGTCCGACAGGCACTCGTaGTCCTCCAGGAAGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TFSPTLFLTCCLVLHRCKSDRHS*SSRKRR Trigger: GCGGCGCTTCCTGGAGGAGCACGAGTGCCTGTCGGA...CTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGTTGGTGGAGAGCACGGTaGTGGCGAAGAAGAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LTNSLPHLLSGPTPLQEGWWRAR*WRRRAP Trigger: CGGCGCTCTTCTTCGCCAGCACCGTGCTCTCCACCA...ACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | TCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGTGCACGGTGACACGCTaGACCACGGCCGTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SHQLSSSLVVWSYTVARGCTVTR*TTAVRK Trigger: CTTCCTGACGGCCGTGGTCCAGCGTGTCACCGTGCA...CCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGTTGCACGGTGACACGCTaGACCACGGCCGTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LTNSLPHLLSGPTPLQEGCTVTR*TTAVRK Trigger: CTTCCTGACGGCCGTGGTCCAGCGTGTCACCGTGCA...ACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | CCAGTCCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGGGCTTTGCCCCCATCTaGCAGGGGCACCGTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PVQIDSPSHQLSSSLVVWGFAPI*QGHRVA Trigger: GGCCACACGGTGCCCCTGTCAGATGGGGGCAAAGCC...CCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGGACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | TCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGCAGCCACCTGCTCAGTaGCGGAGGAGAAGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SHQLSSSLVVWSYTVARGQPPAQ*RRRRTA Trigger: AGCTGTCCTTCTCCTCCGTCACTGAGCAGGTGGCTG...CCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAAGGAACTGCTCCAGCTaGGGCTCCGACAGGCACTCG | + |
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Preference number: 4 (lower is better) Translates to: PSHQLSSSLVVWSYTVARRNCSS*GSDRHS Trigger: CGAGTGCCTGTCGGAGCCGCAGCTGGAGCAGTTCCT...TCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGATGGAGAGCACGGTGCTaGCGAAGAAGAGCGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSHQLSSSLVVWSYTVARWRARC*RRRAPR Trigger: CCTCGGCGCTCTTCTTCGCCAGCACCGTGCTCTCCA...TCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | TCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGTGTGGCCATAGCCTGTaGTGGAGAGCACGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SHQLSSSLVVWSYTVARGCGHSL*WRARCW Trigger: CCAGCACCGTGCTCTCCACCACAGGCTATGGCCACA...CCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACGCGGCCCAGGAACTaGTCCAGCTGCGGCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: QIDSPSHQLSSSLVVWSYTRPRN*SSCGSD Trigger: GTCGGAGCCGCAGCTGGAGCAGTTCCTGGGCCGCGT...GTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGCCGACACTCCATAATTaGTGGCCTCCAGCACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TFSPTLFLTCCLVLHRCKPTLHN*WPPARG Trigger: GCCGCGTGCTGGAGGCCAGCAATTATGGAGTGTCGG...CTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | AAAATCTGCCTCCGCCTACTGCAGTACACTGTTTCAAGTATTCGTCCCCAGTGTTGGTGGAGAGCACGGTaGTGGCGAAGAAGAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: KICLRLLQYTVSSIRPQCWWRAR*WRRRAP Trigger: CGGCGCTCTTCTTCGCCAGCACCGTGCTCTCCACCA...ACACTGGGGACGAATACTTGAAACAGTGTACTGCAGTAGGCGGAGGCAGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR CCA 90 bp | ATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGTGGAGAGCACGGTGCTaGCGAAGAAGAGCGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: IHLLTNSLPHLLSGPTPLWRARC*RRRAPR Trigger: CCTCGGCGCTCTTCTTCGCCAGCACCGTGCTCTCCA...CAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGTGTATGGCACCAGGTGATCACATCTCCTATGAGTTACAGGTGCATACCTGGCCACCACCTGCTTaGAGAAGCCCCAGCGTATGT | + |
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Preference number: 4 (lower is better) Translates to: PQCMAPGDHISYELQVHTWPPPA*RSPSVC Trigger: ACATACGCTGGGGCTTCTCCAAGCAGGTGGTGGCCA...GGTATGCACCTGTAACTCATAGGAGATGTGATCACCTGGTGCCATACACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR TCA 90 bp | ATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAGCCACCTGCTCAGTaGCGGAGGAGAAGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: IHLLTNSLPHLLSGPTPLQPPAQ*RRRRTA Trigger: AGCTGTCCTTCTCCTCCGTCACTGAGCAGGTGGCTG...CAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAACACTCCATAATTGCTaGCCTCCAGCACGCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSHQLSSSLVVWSYTVARTLHNC*PPARGP Trigger: TGGGCCGCGTGCTGGAGGCCAGCAATTATGGAGTGT...TCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | TCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGTATTCCCGAGGCGTTGCTaGGCACCGACACTCCATAAT | + |
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Preference number: 4 (lower is better) Translates to: SPTLFLTCCLVLHRCKRVFPRRC*APTLHN Trigger: ATTATGGAGTGTCGGTGCTCAGCAACGCCTCGGGAA...TACCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | AAATATAAATGTTGCTGCTTAGCTGTCGGCAAAATGATTGGAATGCAAACCCAGCACCAGGCCGAACGGTaGCGCTCCACCAGGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: KYKCCCLAVGKMIGMQTQHQAER*RSTRRT Trigger: CGTGCGCCTGGTGGAGCGGCACCGTTCGGCCTGGTG...CTGGGTTTGCATTCCAATCATTTTGCCGACAGCTAAGCAGCAACATTTATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR GCA 90 bp | ATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGACAATGGCCACCACCTaGTTGGAGAAGCCCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: IHLLTNSLPHLLSGPTPLTMATT*LEKPQR Trigger: ACGCTGGGGCTTCTCCAAGCAGGTGGTGGCCATTGT...CAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTAGGCCATAGCCTGTGGTaGAGAGCACGGTGCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PNRFTFSPTLFLTCCLVLGHSLW*RARCWR Trigger: TCGCCAGCACCGTGCTCTCCACCACAGGCTATGGCC...TAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGTGTATGGCACCAGGTGATCACATCTCCTATGAGTTACAGGTGCATACCAGAGAACACGGCGGCTaGGATGAAGAAGAAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PQCMAPGDHISYELQVHTREHGG*DEEEAG Trigger: TCCTGCTTCTTCTTCATCCCAGCCGCCGTGTTCTCT...GGTATGCACCTGTAACTCATAGGAGATGTGATCACCTGGTGCCATACACTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR TCA 90 bp | ATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGTTCCCGAGGCGTTGCTaGGCACCGACACTCCATAAT | + |
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Preference number: 4 (lower is better) Translates to: IHLLTNSLPHLLSGPTPLFPRRC*APTLHN Trigger: ATTATGGAGTGTCGGTGCTCAGCAACGCCTCGGGAA...CAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | ATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCACACGGCGGCTGGGATaGAGAAGAAGCAGGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: IDSPSHQLSSSLVVWSYTTRRLG*RRSRKR Trigger: CCGTTTCCTGCTTCTTCTTCATCCCAGCCGCCGTGT...GGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | CACCGTTGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGATTTTAGCGCCGCTTCAGCTTaGGCAGCTCCTGGCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HRCKRVEMYTGTEYRTDFSAASA*AAPGAA Trigger: TGCTGCGCCAGGAGCTGCGCAAGCTGAAGCGGCGCT...AAAATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | GTCCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCACACTCCATAATTGCTaGCCTCCAGCACGCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VQIDSPSHQLSSSLVVWSTLHNC*PPARGP Trigger: TGGGCCGCGTGCTGGAGGCCAGCAATTATGGAGTGT...GGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | GTCCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTGGCCACCACCTGCTTaGAGAAGCCCCAGCGTATGT | + |
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Preference number: 4 (lower is better) Translates to: VQIDSPSHQLSSSLVVWSWPPPA*RSPSVC Trigger: ACATACGCTGGGGCTTCTCCAAGCAGGTGGTGGCCA...GGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACCCAGCAGAACGGCATaGACAATGGCCACCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: PNRFTFSPTLFLTCCLVLPSRTA*TMATTC Trigger: GCAGGTGGTGGCCATTGTCCATGCCGTTCTGCTGGG...TAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | AAAATCTGCCTCCGCCTACTGCAGTACACTGTTTCAAGTATTCGTCCCCAGTGTAGAAGCAGGAAACGGTaGCAAATCCCAGCAGAACGG | + |
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Preference number: 4 (lower is better) Translates to: KICLRLLQYTVSSIRPQCRSRKR*QIPAER Trigger: CCGTTCTGCTGGGATTTGTCACCGTTTCCTGCTTCT...ACACTGGGGACGAATACTTGAAACAGTGTACTGCAGTAGGCGGAGGCAGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR TCA 90 bp | GTATGCCTTCCAGTCCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTACACGGCGGCTGGGATaGAGAAGAAGCAGGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: VCLPVQIDSPSHQLSSSLTRRLG*RRSRKR Trigger: CCGTTTCCTGCTTCTTCTTCATCCCAGCCGCCGTGT...AAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGGACTGGAAGGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | ATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGAACGGCATGGACAATaGCCACCACCTGCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IDSPSHQLSSSLVVWSYTERHGQ*PPPAWR Trigger: TCTCCAAGCAGGTGGTGGCCATTGTCCATGCCGTTC...GGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACGTTGTAGCCTTCCCCTaGAACATAGTCCCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QIDSPSHQLSSSLVVWSYVVAFP*NIVPQA Trigger: GGCCTGGGGGACTATGTTCCAGGGGAAGGCTACAAC...GTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR TCA 90 bp | ACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGCGTAGAACATCTTCCTaGACTTCTTCAGCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TFSPTLFLTCCLVLHRCKRRTSS*TSSARG Trigger: TCCACGAGCTGAAGAAGTTCAGGAAGATGTTCTACG...CTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | GTTACATATAAAATCTGCCTCCGCCTACTGCAGTACACTGTTTCAAGTATTCGTCCGACACTCCATAATTaGTGGCCTCCAGCACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VTYKICLRLLQYTVSSIRPTLHN*WPPARG Trigger: GCCGCGTGCTGGAGGCCAGCAATTATGGAGTGTCGG...ACGAATACTTGAAACAGTGTACTGCAGTAGGCGGAGGCAGATTTTATATGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR GCA 90 bp | ATTCGTCCCCAGTGTATGGCACCAGGTGATCACATCTCCTATGAGTTACAGGTGACAAAAGGCTCACTTTaGTTCTGCTCCTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IRPQCMAPGDHISYELQVTKGSL*FCSSFR Trigger: CCTGAAGGAGGAGCAGAAGCAAAGTGAGCCTTTTGT...CACCTGTAACTCATAGGAGATGTGATCACCTGGTGCCATACACTGGGGACGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR GCA 90 bp | CAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACCTGGGTTTTTGCTTCTaGTCCTCCTTCAGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QIDSPSHQLSSSLVVWSYLGFCF*SSFRPA Trigger: GGCTGGCCTGAAGGAGGAGCAGAAGCAAAAACCCAG...GTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTACACCGTTGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTGAACGGCATGGACAATaGCCACCACCTGCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LVLHRCKRVEMYTGTEYRERHGQ*PPPAWR Trigger: TCTCCAAGCAGGTGGTGGCCATTGTCCATGCCGTTC...ACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTGTAGGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | TATAAATGTTGCTGCTTAGCTGTCGGCAAAATGATTGGAATGCAAACCCAGAGTCCCAGCAGAACGGCATaGACAATGGCCACCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: YKCCCLAVGKMIGMQTQSPSRTA*TMATTC Trigger: GCAGGTGGTGGCCATTGTCCATGCCGTTCTGCTGGG...ACTCTGGGTTTGCATTCCAATCATTTTGCCGACAGCTAAGCAGCAACATTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR GCA 90 bp | TATAAATGTTGCTGCTTAGCTGTCGGCAAAATGATTGGAATGCAAACCCAGAGTACAATGGCCACCACCTaGTTGGAGAAGCCCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: YKCCCLAVGKMIGMQTQSTMATT*LEKPQR Trigger: ACGCTGGGGCTTCTCCAAGCAGGTGGTGGCCATTGT...ACTCTGGGTTTGCATTCCAATCATTTTGCCGACAGCTAAGCAGCAACATTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTTATCTTGGCTTAAGAAGTACAGGGATATCTGTTAGCCTACACATATGTTGTGGCCATAGCCTGTaGTGGAGAGCACGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISYLGLRSTGISVSLHICCGHSL*WRARCW Trigger: CCAGCACCGTGCTCTCCACCACAGGCTATGGCCACA...ACATATGTGTAGGCTAACAGATATCCCTGTACTTCTTAAGCCAAGATAAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR TCA 90 bp | AAAATCTGCCTCCGCCTACTGCAGTACACTGTTTCAAGTATTCGTCCCCAGTGTTGGTGCTCAGGGAGATaGAACAGAAGTAAAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: KICLRLLQYTVSSIRPQCWCSGR*NRSKKT Trigger: AGTCTTTTTACTTCTGTTTCATCTCCCTGAGCACCA...ACACTGGGGACGAATACTTGAAACAGTGTACTGCAGTAGGCGGAGGCAGATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR TCA 90 bp | GTATGCCTTCCAGTCCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTCGTAGAACATCTTCCTaGACTTCTTCAGCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VCLPVQIDSPSHQLSSSLRRTSS*TSSARG Trigger: TCCACGAGCTGAAGAAGTTCAGGAAGATGTTCTACG...AAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGGACTGGAAGGCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | CACCGTTGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGATTTTAGAGAACACGGCGGCTaGGATGAAGAAGAAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HRCKRVEMYTGTEYRTDFREHGG*DEEEAG Trigger: TCCTGCTTCTTCTTCATCCCAGCCGCCGTGTTCTCT...AAAATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CCA 90 bp | ATCTCTTATCTTGGCTTAAGAAGTACAGGGATATCTGTTAGCCTACACATATGTGCCATCCTCATAGGGTaGGGACTGGGAGGCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: ISYLGLRSTGISVSLHICAILIG*GLGGHK Trigger: TTTGTGGCCTCCCAGTCCCCACCCTATGAGGATGGC...ACATATGTGTAGGCTAACAGATATCCCTGTACTTCTTAAGCCAAGATAAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR TCA 90 bp | ATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCTGGTGCTCAGGGAGATaGAACAGAAGTAAAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: IDSPSHQLSSSLVVWSYTWCSGR*NRSKKT Trigger: AGTCTTTTTACTTCTGTTTCATCTCCCTGAGCACCA...GGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR GCA 90 bp | ATAATCATTTTGGATAGGCACATGCAAGCCAGGACACTTAAACCTACTTATAAAGGCTCACTTTGCTTCTaGTCCTCCTTCAGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IIILDRHMQARTLKPTYKGSLCF*SSFRPA Trigger: GGCTGGCCTGAAGGAGGAGCAGAAGCAAAGTGAGCC...TTTATAAGTAGGTTTAAGTGTCCTGGCTTGCATGTGCCTATCCAAAATGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR CCA 90 bp | ATAATCATTTTGGATAGGCACATGCAAGCCAGGACACTTAAACCTACTTATAAAGTTGTAGCCTTCCCCTaGAACATAGTCCCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IIILDRHMQARTLKPTYKVVAFP*NIVPQA Trigger: GGCCTGGGGGACTATGTTCCAGGGGAAGGCTACAAC...TTTATAAGTAGGTTTAAGTGTCCTGGCTTGCATGTGCCTATCCAAAATGATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046765.10 |
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| CDS-3UTR GCA 90 bp | CACCGTTGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGATTTTGCAATTCTGGGTTTTTaGTTCTGCTCCTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRCKRVEMYTGTEYRTDFAILGF*FCSSFR Trigger: CCTGAAGGAGGAGCAGAAGCAAAAACCCAGAATTGC...AAAATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212831.2 |
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| CDS GCA 90 bp | GCTCCGACAGGCACTCGTGCTCCTCCAGGAAGCGCCGCTTCAGCTTaGGCAGCTCCTGGCGCAGCAGGTCCTCATAAGGCAGCTCCACGG | + |
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Preference number: 5 (lower is better) Translates to: APTGTRAPPGSAASA*AAPGAAGPHKAAPR Trigger: CCGTGGAGCTGCCTTATGAGGACCTGCTGCGCCAGGAGCTGCGCAAGCTGAAGCGGCGCTTCCTGGAGGAGCACGAGTGCCTGTCGGAGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS CCA 90 bp | CACCACCTGCTTGGAGAAGCCCCAGCGTATGTGGAAGTAGAGGACTaGTCTGCGGGTGACATGCACGGTGACACGCTGGACCACGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: HHLLGEAPAYVEVED*SAGDMHGDTLDHGR Trigger: ACGGCCGTGGTCCAGCGTGTCACCGTGCATGTCACCCGCAGACCAGTCCTCTACTTCCACATACGCTGGGGCTTCTCCAAGCAGGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | TCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGAGGGAAGCGCCGCTTCAGCTaGCGCAGCTCCTGGCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SHQLSSSLVVWSYTVARGKRRFS*RSSWRS Trigger: GCTGCGCCAGGAGCTGCGCAAGCTGAAGCGGCGCTT...CCCTCTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | CCAGTCCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGAAGCGCCGCTTCAGCTaGCGCAGCTCCTGGCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PVQIDSPSHQLSSSLVVWKRRFS*RSSWRS Trigger: GCTGCGCCAGGAGCTGCGCAAGCTGAAGCGGCGCTT...CCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | ACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGCAAGCAATTTCCCGAGGCGTaGCTGAGCACCGACACTCCA | + |
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Preference number: 5 (lower is better) Translates to: TFSPTLFLTCCLVLHRCKQFPEA*LSTDTP Trigger: TGGAGTGTCGGTGCTCAGCAACGCCTCGGGAAATTG...CTTGCAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | ATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCGTTGATGGCCACCACCTGCTaGGAGAAGCCCCAGCGTATG | + |
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Preference number: 5 (lower is better) Translates to: IHLLTNSLPHLLSGPTPLMATTC*EKPQRM Trigger: CATACGCTGGGGCTTCTCCAAGCAGGTGGTGGCCAT...CAACGGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | ATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACACCATGGCCACCACCTGCTaGGAGAAGCCCCAGCGTATG | + |
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Preference number: 5 (lower is better) Translates to: IDSPSHQLSSSLVVWSYTMATTC*EKPQRM Trigger: CATACGCTGGGGCTTCTCCAAGCAGGTGGTGGCCAT...GGTGTAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | CCAAATAGATTCACCTTCTCACCAACTCTCTTCCTCACTTGTTGTCTGGTCCTACAATTTCCCGAGGCGTaGCTGAGCACCGACACTCCA | + |
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Preference number: 5 (lower is better) Translates to: PNRFTFSPTLFLTCCLVLQFPEA*LSTDTP Trigger: TGGAGTGTCGGTGCTCAGCAACGCCTCGGGAAATTG...TAGGACCAGACAACAAGTGAGGAAGAGAGTTGGTGAGAAGGTGAATCTATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS TCA 90 bp | GAACCAGGTCTTCGTCCTTGTCTTTCTTCACGTAGAACATCTTCCTaGACTTCTTCAGCTCGTGGAGTTCACAGAAGGTCTCCAGGACAA | + |
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Preference number: 5 (lower is better) Translates to: EPGLRPCLSSRRTSS*TSSARGVHRRSPGQ Trigger: TTGTCCTGGAGACCTTCTGTGAACTCCACGAGCTGAAGAAGTTCAGGAAGATGTTCTACGTGAAGAAAGACAAGGACGAAGACCTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS-3UTR CAA 90 bp | CACCGTTGCAAGAGGGTAGAAATGTATACAGGAACAGAATATCGTACCGATTTTATGATGCAGAAGGCTTaGCCCCCATCTGACAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: HRCKRVEMYTGTEYRTDFMMQKA*PPSDRG Trigger: GCCCCTGTCAGATGGGGGCAAAGCCTTCTGCATCAT...AAAATCGGTACGATATTCTGTTCCTGTATACATTTCTACCCTCTTGCAACGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS GCA 72 bp | CCCAGCACCAGGAAGCCGAAGCACCAGGCCGAACGGTaGCGCTCCACCAGGCGCACGCACGAGCTGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PSTRKPKHQAER*RSTRRTHELPA Trigger: GGCCGGCAGCTCGTGCGTGCGCCTGGTGGAGCGGCACCGTTCGGCCTGGTGCTTCGGCTTCCTGGTGCTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS GCA 72 bp | CTGGCCTCCAGCACGCGGCCCAGGAACTGCTCCAGCTaGGGCTCCGACAGGCACTCGTGCTCCTCCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LASSTRPRNCSS*GSDRHSCSSRK Trigger: CTTCCTGGAGGAGCACGAGTGCCTGTCGGAGCCGCAGCTGGAGCAGTTCCTGGGCCGCGTGCTGGAGGCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS GCA 72 bp | GGCACTCGTGCTCCTCCAGGAAGCGCCGCTTCAGCTTaGGCAGCTCCTGGCGCAGCAGGTCCTCATAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GTRAPPGSAASA*AAPGAAGPHKA Trigger: TGCCTTATGAGGACCTGCTGCGCCAGGAGCTGCGCAAGCTGAAGCGGCGCTTCCTGGAGGAGCACGAGTGCC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS CCA 72 bp | AGGACTGGTCTGCGGGTGACATGCACGGTGACACGCTaGACCACGGCCGTCAGGAAGAGGAGGGTGAACGGG | + |
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Preference number: 6 (lower is better) Translates to: RTGLRVTCTVTR*TTAVRKRRVNG Trigger: CCCGTTCACCCTCCTCTTCCTGACGGCCGTGGTCCAGCGTGTCACCGTGCATGTCACCCGCAGACCAGTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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| CDS TCA 72 bp | CTTCGTCCTTGTCTTTCTTCACGTAGAACATCTTCCTaGACTTCTTCAGCTCGTGGAGTTCACAGAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LRPCLSSRRTSS*TSSARGVHRRS Trigger: AGACCTTCTGTGAACTCCACGAGCTGAAGAAGTTCAGGAAGATGTTCTACGTGAAGAAAGACAAGGACGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046765.10 ENSMUST00000212831.2 |
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