Pregenerated sensors for KCNJ8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030247Ensembl transcript IDs: ENSMUST00000032374.9, ENSMUST00000203945.3
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCAACAGGAATGTCCTGCTGATGAATAGGCACCACCTCCCCTTCTaGCGTCGTGGTTTTCTTGACCACCTGGATGCGCACCGAGGCGCT | + |
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Preference number: 1 (lower is better) Translates to: INRNVLLMNRHHLPF*RRGFLDHLDAHRGA Trigger: AGCGCCTCGGTGCGCATCCAGGTGGTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTGCCTATTCATCAGCAGGACATTCCTGTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 90 bp | TTCCGCAGAGAATTCTGGTGCGACAGTTCGCTCTTTTGGAGGGTCTaGATCAGGATGGAAGGCTTCTCATCCAGCTCCCGGGCACTGCAT | + |
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Preference number: 1 (lower is better) Translates to: FRREFWCDSSLFWRV*IRMEGFSSSSRALH Trigger: ATGCAGTGCCCGGGAGCTGGATGAGAAGCCTTCCATCCTGATTCAGACCCTCCAAAAGAGCGAACTGTCGCACCAGAATTCTCTGCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR GCA 90 bp | GGGTCTGAATCAGGATGGAAGGCTTCTCATCCAGCTCCCGGGCACTaGATCTTGGCGCAGCCACTCTCACCGTGTTACCAAATTTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: GSESGWKASHPAPGH*ILAQPLSPCYQIWN Trigger: ATTCCAAATTTGGTAACACGGTGAGAGTGGCTGCGCCAAGATGCAGTGCCCGGGAGCTGGATGAGAAGCCTTCCATCCTGATTCAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CCA 90 bp | AATCAGGATGGAAGGCTTCTCATCCAGCTCCCGGGCACTGCATCTTaGCGCAGCCACTCTCACCGTGTTACCAAATTTGGAATAGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: NQDGRLLIQLPGTAS*RSHSHRVTKFGIVH Trigger: GTGGACTATTCCAAATTTGGTAACACGGTGAGAGTGGCTGCGCCAAGATGCAGTGCCCGGGAGCTGGATGAGAAGCCTTCCATCCTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 90 bp | GTGGTTTCTACCACGCCCTCGAGAATCACTATGACCTCCAGGTCTTaGTTGGCAAGGTCAGTTGCTGAGATATCATACAGGGGGCTACGC | + |
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Preference number: 1 (lower is better) Translates to: VVSTTPSRITMTSRS*LARSVAEISYRGLR Trigger: GCGTAGCCCCCTGTATGATATCTCAGCAACTGACCTTGCCAATCAAGACCTGGAGGTCATAGTGATTCTCGAGGGCGTGGTAGAAACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CCA 90 bp | AGTAACTGTCTCCGGTCATCCTGCCCTCATGATTCTGATGGACACTaGTTTCCTTCTGGAGTCATGAACTGCACCTTGGGCACCATGAGG | + |
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Preference number: 1 (lower is better) Translates to: SNCLRSSCPHDSDGH*FPSGVMNCTLGTMR Trigger: CCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAAACCAGTGTCCATCAGAATCATGAGGGCAGGATGACCGGAGACAGTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR GCA 90 bp | CCTCATGATTCTGATGGACACTGGTTTCCTTCTGGAGTCATGAACTaGACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: PHDSDGHWFPSGVMN*TLGTMREELFLLME Trigger: CTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAAACCAGTGTCCATCAGAATCATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 90 bp | GAGAATCACTATGACCTCCAGGTCTTGATTGGCAAGGTCAGTTGCTaGGATATCATACAGGGGGCTACGCTTGTCAATCACGTGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: ENHYDLQVLIGKVSC*DIIQGATLVNHVAD Trigger: ATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATGATATCTCAGCAACTGACCTTGCCAATCAAGACCTGGAGGTCATAGTGATTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR GCA 90 bp | GCTATCAGTCATCAGGACTCAACAAGTAACTGTCTCCGGTCATCCTaGCCTCATGATTCTGATGGACACTGGTTTCCTTCTGGAGTCATG | + |
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Preference number: 1 (lower is better) Translates to: AISHQDSTSNCLRSS*PHDSDGHWFPSGVM Trigger: CATGACTCCAGAAGGAAACCAGTGTCCATCAGAATCATGAGGGCAGGATGACCGGAGACAGTTACTTGTTGAGTCCTGATGACTGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 90 bp | CTGAGATATCATACAGGGGGCTACGCTTGTCAATCACGTGGCAGATaGTCAATGGGGCCACTAGGAAGATATTATTGCTCTCGATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LRYHTGGYACQSRGR*SMGPLGRYYCSRWD Trigger: ATCCCATCGAGAGCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATGATATCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CCA 90 bp | TCAGTTGCTGAGATATCATACAGGGGGCTACGCTTGTCAATCACGTaGCAGATGATCAATGGGGCCACTAGGAAGATATTATTGCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: SVAEISYRGLRLSIT*QMINGATRKILLLS Trigger: CGAGAGCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATGATATCTCAGCAACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 90 bp | ATTAACCCAGCAGGTGCTATTTGCTTGGTTAGCAACCTGAGTCTTTaGAGGTTAGATTTGAACATATTCATGATGACCCGTGTGGTTCAA | + |
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Preference number: 1 (lower is better) Translates to: INPAGAICLVSNLSL*RLDLNIFMMTRVVQ Trigger: TTGAACCACACGGGTCATCATGAATATGTTCAAATCTAACCTTCAAAGACTCAGGTTGCTAACCAAGCAAATAGCACCTGCTGGGTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCATGGCGGCTGAAAATCAGCGTCTCTGCCCTTCTGTGGGCCTGCGCCGTCGCAGAATCAAAACCGTaGTGGCCAGAGGGCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: TAWRLKISVSALLWACAVAESKP*WPEGIP Trigger: AGGAATGCCCTCTGGCCATCACGGTTTTGATTCTGC...GACGGCGCAGGCCCACAGAAGGGCAGAGACGCTGATTTTCAGCCGCCATGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CAA 90 bp | GGAGTTGCGCTTCCGCAGAGAATTCTGGTGCGACAGTTCGCTCTTTaGGAGGGTCTGAATCAGGATGGAAGGCTTCTCATCCAGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GVALPQRILVRQFAL*EGLNQDGRLLIQLP Trigger: CGGGAGCTGGATGAGAAGCCTTCCATCCTGATTCAGACCCTCCAAAAGAGCGAACTGTCGCACCAGAATTCTCTGCGGAAGCGCAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTTGTTTCTCCTCATGGAGTTGCGCTTCCGCAGAGAATTCTGGTGCGACACACCCACCCGGAACATaGAGCACAGCTTGCCATTGC | + |
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Preference number: 2 (lower is better) Translates to: WSCFSSWSCASAENSGATHPPGT*STACHC Trigger: GCAATGGCAAGCTGTGCTTCATGTTCCGGGTGGGTG...TGTCGCACCAGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAAACAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAGTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGGAAAATCAGCGTCTCTaGCCTTCTGTGGGCCTGCGC | + |
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Preference number: 2 (lower is better) Translates to: SGVMNCTLGTMREELFLLENQRL*PSVGLR Trigger: GCGCAGGCCCACAGAAGGGCAGAGACGCTGATTTTC...CAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTACGGCAATCACAGCATaGCGGCTGAAAATCAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPTAITA*RLKISV Trigger: GACGCTGATTTTCAGCCGCCATGCTGTGATTGCCGT...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CCA 90 bp | TCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCACCACCTCCCCTTCTaGCGTCGTGGTTTTCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: SHTVLTQDVSLLCPYLRVHHLPF*RRGFLD Trigger: GTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTG...CACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGGTCTCTGCCCTTCTGTaGGCCTGCGCCGTCTTCATG | + |
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Preference number: 2 (lower is better) Translates to: SFHVLPHHTTCYPHITHWVSALL*ACAVFM Trigger: CATGAAGACGGCGCAGGCCCACAGAAGGGCAGAGAC...CCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGTCAGTTGCTGAGATATCATACAGGGGGCTACGCTTGTCAATCACGTGGGTTTTCTTGACCACCTaGATGCGCACCGAGGCGCTA | + |
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Preference number: 2 (lower is better) Translates to: ARSVAEISYRGLRLSITWVFLTT*MRTEAL Trigger: TAGCGCCTCGGTGCGCATCCAGGTGGTCAAGAAAAC...CCACGTGATTGACAAGCGTAGCCCCCTGTATGATATCTCAGCAACTGACCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CAA 90 bp | TCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTaGAGGGTGCAGGACCTAAGAATGACGAAACTGGGCTTGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SHTVLTQDVSLLCPY*RVQDLRMTKLGLGR Trigger: TCTACCCAAGCCCAGTTTCGTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| 3UTR-3UTR TCA 90 bp | CCGCATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCAACTGTGCTCCAGCCCTaGACTGGTGATGAGTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: PHHTTCYPHITHWVNPTSTVLQP*TGDECN Trigger: ATTGCACTCATCACCAGTTCAGGGCTGGAGCACAGT...TGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| 3UTR-3UTR GCA 90 bp | GTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAGGCAGCCCAACATGACTaGGTTGATGATCAGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: VMNCTLGTMREELFLLMEAAQHD*VDDQTH Trigger: GTGGGTCTGATCATCAACGCAGTCATGTTGGGCTGC...CTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR GCA 90 bp | GTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAGAGCACAGCTTGCCATTaGGGACGGCAATCACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VMNCTLGTMREELFLLMESTACH*GRQSQH Trigger: ATGCTGTGATTGCCGTCCGCAATGGCAAGCTGTGCT...CTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR TCA 90 bp | AGGACTCAACAAGTAACTGTCTCCGGTCATCCTGCCCTCATGATTCTGATGGACTCCGTGCTTGTGTGGTaGTGCCTGTGGTTTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: RTQQVTVSGHPALMILMDSVLVW*CLWFLP Trigger: TGGTAGAAACCACAGGCATCACCACACAAGCACGGA...GTCCATCAGAATCATGAGGGCAGGATGACCGGAGACAGTTACTTGTTGAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR TCA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACTTCCTTCTGGAGTCATaGACTGCACCTTGGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: HHTTCYPHITHWVNPTSHFLLES*TAPWAP Trigger: TGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAA...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCATGATTCTGATGGACACTGGTTTCCTTCTGGAGTCATGAACTGCACCTTGGGCAAGGTCAGTTGCTaGGATATCATACAGGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PHDSDGHWFPSGVMNCTLGKVSC*DIIQGA Trigger: AGCCCCCTGTATGATATCTCAGCAACTGACCTTGCC...CAAGGTGCAGTTCATGACTCCAGAAGGAAACCAGTGTCCATCAGAATCATGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR TCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAGTTATTCCTCCTaGTGGAGTTGTTTCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPKSYSS*WSCFSS Trigger: TGAGGAGAAACAACTCCATCAGGAGGAATAACTCTT...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAGTTGTTTCTCCTCATaGAGTTGTTTCTCCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPSCFSS*SCFSSW Trigger: CCATGAGGAGAAACAACTCCATGAGGAGAAACAACT...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CAA 90 bp | AGGGAAGAGTTATTCCTCCTGATGGAGTTGTTTCTCCTCATGGAGTaGTTTCTCCTCATGGAGTTGCGCTTCCGCAGAGAATTCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: REELFLLMELFLLME*FLLMELRFRREFWC Trigger: GCACCAGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAAACAACTCCATGAGGAGAAACAACTCCATCAGGAGGAATAACTCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR GCA 90 bp | AGGACTCAACAAGTAACTGTCTCCGGTCATCCTGCCCTCATGATTCTGATGGACTTCTCCTCATGGAGTTaGGCTTCCGCAGAGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: RTQQVTVSGHPALMILMDFSSWS*ASAENS Trigger: AGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAA...GTCCATCAGAATCATGAGGGCAGGATGACCGGAGACAGTTACTTGTTGAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CAA 90 bp | GATTCTGATGGACACTGGTTTCCTTCTGGAGTCATGAACTGCACCTaGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DSDGHWFPSGVMNCT*GTMREELFLLMELF Trigger: AAACAACTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAAACCAGTGTCCATCAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAAATGAATTCAAGCCCCAGACTCTGAATAAAAGGCTACCCAGCTGCCCAAGACCCACGATGTTCTaGAGAATCAAAACCGTGATG | + |
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Preference number: 2 (lower is better) Translates to: VRNEFKPQTLNKRLPSCPRPTMF*RIKTVM Trigger: CATCACGGTTTTGATTCTGCAGAACATCGTGGGTCT...TGGGCAGCTGGGTAGCCTTTTATTCAGAGTCTGGGGCTTGAATTCATTTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAATATTATTGCTCTCGATaGGATTATCAACAGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: QKHRPTDLTTETAGKKTEYYCSR*DYQQEC Trigger: ACATTCCTGTTGATAATCCCATCGAGAGCAATAATA...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 72 bp | GCTTGCCATTGCGGACGGCAATCACAGCATGGCGGCTaGAAATCAGCGTCTCTGCCCTTCTGTGGGCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: ACHCGRQSQHGG*KSASLPFCGPA Trigger: CGCAGGCCCACAGAAGGGCAGAGACGCTGATTTTCAGCCGCCATGCTGTGATTGCCGTCCGCAATGGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR GCA 72 bp | TCAGGATGGAAGGCTTCTCATCCAGCTCCCGGGCACTaGATCTTGGCGCAGCCACTCTCACCGTGTTACCAA | + |
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Preference number: 3 (lower is better) Translates to: SGWKASHPAPGH*ILAQPLSPCYQ Trigger: TTGGTAACACGGTGAGAGTGGCTGCGCCAAGATGCAGTGCCCGGGAGCTGGATGAGAAGCCTTCCATCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CAA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTGGCGTCGTGGTTTTCTaGACCACCTGGATGCGCACC | + |
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Preference number: 3 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPGVVVF*TTWMRT Trigger: GGTGCGCATCCAGGTGGTCAAGAAAACCACGACGCC...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CCA 72 bp | GGAAGGCTTCTCATCCAGCTCCCGGGCACTGCATCTTaGCGCAGCCACTCTCACCGTGTTACCAAATTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GRLLIQLPGTAS*RSHSHRVTKFG Trigger: TCCAAATTTGGTAACACGGTGAGAGTGGCTGCGCCAAGATGCAGTGCCCGGGAGCTGGATGAGAAGCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CCA 72 bp | AATGTCCTGCTGATGAATAGGCACCACCTCCCCTTCTaGCGTCGTGGTTTTCTTGACCACCTGGATGCGCAC | + |
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Preference number: 3 (lower is better) Translates to: NVLLMNRHHLPF*RRGFLDHLDAH Trigger: GTGCGCATCCAGGTGGTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTGCCTATTCATCAGCAGGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 72 bp | GAATTCTGGTGCGACAGTTCGCTCTTTTGGAGGGTCTaGATCAGGATGGAAGGCTTCTCATCCAGCTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: EFWCDSSLFWRV*IRMEGFSSSSR Trigger: CCGGGAGCTGGATGAGAAGCCTTCCATCCTGATTCAGACCCTCCAAAAGAGCGAACTGTCGCACCAGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR CCA 72 bp | CTCCGGTCATCCTGCCCTCATGATTCTGATGGACACTaGTTTCCTTCTGGAGTCATGAACTGCACCTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LRSSCPHDSDGH*FPSGVMNCTLG Trigger: GCCCAAGGTGCAGTTCATGACTCCAGAAGGAAACCAGTGTCCATCAGAATCATGAGGGCAGGATGACCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CAA 90 bp | GTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAGAAGCACAGCTTGCCATaGCGGACGGCAATCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: VMNCTLGTMREELFLLMEKHSLP*RTAITA Trigger: TGCTGTGATTGCCGTCCGCAATGGCAAGCTGTGCTT...CTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTGGAGTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTCCTCCTCAGTCACAATaGACACGAAGCGGTGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: FWSHELHLGHHEGRVIPPPPQSQ*TRSGVP Trigger: GGGGACACCGCTTCGTGTCAATTGTGACTGAGGAGG...AGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR TCA 72 bp | TGCCTGTGGTTTCTACCACGCCCTCGAGAATCACTATaGCCTCCAGGTCTTGATTGGCAAGGTCAGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: CLWFLPRPRESL*PPGLDWQGQLL Trigger: CAGCAACTGACCTTGCCAATCAAGACCTGGAGGTCATAGTGATTCTCGAGGGCGTGGTAGAAACCACAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR GCA 72 bp | TCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTaGCCTTACTTGAGGGTGCAGGACCTAAGAATGACG | + |
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Preference number: 3 (lower is better) Translates to: SHTVLTQDVSLL*PYLRVQDLRMT Trigger: CGTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| 3UTR-3UTR CAA 90 bp | AGTTGTTTCTCCTCATGGAGTTGCGCTTCCGCAGAGAATTCTGGTGCGACAGTTTACAGGGGGCTACGCTaGTCAATCACGTGGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: SCFSSWSCASAENSGATVYRGLR*SITWQM Trigger: CATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTA...AACTGTCGCACCAGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAAACAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTGGAGTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTAACATGAAGCACAGCTaGCCATTGCGGACGGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: FWSHELHLGHHEGRVIPPNMKHS*PLRTAI Trigger: GATTGCCGTCCGCAATGGCAAGCTGTGCTTCATGTT...AGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGCCCAACATGACTGCGTaGATGATCAGACCCACGATG | + |
|
Preference number: 3 (lower is better) Translates to: SFHVLPHHTTCYPHITHWPNMTA*MIRPTM Trigger: CATCGTGGGTCTGATCATCAACGCAGTCATGTTGGG...CCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACCGACAGTTCGCTCTTTaGGAGGGTCTGAATCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HHTTCYPHITHWVNPTSHRQFAL*EGLNQD Trigger: ATCCTGATTCAGACCCTCCAAAAGAGCGAACTGTCG...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR TCA 72 bp | ACCACGCCCTCGAGAATCACTATGACCTCCAGGTCTTaGTTGGCAAGGTCAGTTGCTGAGATATCATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TTPSRITMTSRS*LARSVAEISYR Trigger: CCTGTATGATATCTCAGCAACTGACCTTGCCAATCAAGACCTGGAGGTCATAGTGATTCTCGAGGGCGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR TCA 72 bp | CATACAGGGGGCTACGCTTGTCAATCACGTGGCAGATaGTCAATGGGGCCACTAGGAAGATATTATTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTGGYACQSRGR*SMGPLGRYYCS Trigger: AGAGCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR TCA 72 bp | TATGACCTCCAGGTCTTGATTGGCAAGGTCAGTTGCTaGGATATCATACAGGGGGCTACGCTTGTCAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: YDLQVLIGKVSC*DIIQGATLVNH Trigger: GTGATTGACAAGCGTAGCCCCCTGTATGATATCTCAGCAACTGACCTTGCCAATCAAGACCTGGAGGTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGAAATGAATTCAAGCCCCAGACTCTGAATAAAAGGCTACCCAGCTGCCCATATGACCTCCAGGTCTaGATTGGCAAGGTCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VRNEFKPQTLNKRLPSCPYDLQV*IGKVSC Trigger: GCAACTGACCTTGCCAATCAAGACCTGGAGGTCATA...TGGGCAGCTGGGTAGCCTTTTATTCAGAGTCTGGGGCTTGAATTCATTTCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR TCA 72 bp | CTGCTAAGTGACAGAAGCTCAAAAACACAGGCCAACTaGCCTGACTACAGAGACTGCTGGGAAGAAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLSDRSSKTQAN*PDYRDCWEENR Trigger: TCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGCTTCTGTCACTTAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| 3UTR CCA 72 bp | GAGATATCATACAGGGGGCTACGCTTGTCAATCACGTaGCAGATGATCAATGGGGCCACTAGGAAGATATTA | + |
|
Preference number: 3 (lower is better) Translates to: EISYRGLRLSIT*QMINGATRKIL Trigger: TAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATGATATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR TCA 72 bp | GCAGGTGCTATTTGCTTGGTTAGCAACCTGAGTCTTTaGAGGTTAGATTTGAACATATTCATGATGACCCGT | + |
|
Preference number: 3 (lower is better) Translates to: AGAICLVSNLSL*RLDLNIFMMTR Trigger: ACGGGTCATCATGAATATGTTCAAATCTAACCTTCAAAGACTCAGGTTGCTAACCAAGCAAATAGCACCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| 3UTR TCA 72 bp | TTATTAAACAGGCAAGCAGGGCTTCAGGTACCTGTTTaGTCTTTGAGTCTGGAGTTCCAAGTCAGACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLNRQAGLQVPV*SLSLEFQVRHF Trigger: AAAATGTCTGACTTGGAACTCCAGACTCAAAGATCAAACAGGTACCTGAAGCCCTGCTTGCCTGTTTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| 3UTR GCA 72 bp | ATTAATATTTCTCAGTGCATTAGGATAGGAATACTGTaGTCCAGCCCTGAACTGGTGATGAGTGCAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: INISQCIRIGIL*SSPELVMSAIF Trigger: AAATATTGCACTCATCACCAGTTCAGGGCTGGAGCACAGTATTCCTATCCTAATGCACTGAGAAATATTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTCGCGGATGCGCGGTTTaGGCAGGTTCTCCGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPRGCAV*AGSPLR Trigger: TCGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCG...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTGCGTCGTGGTTTTCTTaGCCACCTGGATGCGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPASWFS*PPGCAP Trigger: CGGTGCGCATCCAGGTGGTCAAGAAAACCACGACGC...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | GTCCTGCTGATGAATAGGCACCACCTCCCCTTCTGGCGTCGTGGTTTTCTTGACGGTTCTCCGCTGCGATaGGCGCCAGCACATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLMNRHHLPFWRRGFLDGSPLR*APAHTP Trigger: AGGAGTATGTGCTGGCGCGCATCGCAGCGGAGAACC...GTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTGCCTATTCATCAGCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACGCGCAGGTTCTCCGCTaGGATGCGCGCCAGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDAQVLR*DARQHI Trigger: TATGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGC...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CAATTGACACGAAGCGGTGTCCCCACTGGATCTCCTCGGCAATGTAGGAGGTCCAAGATGACCAGCGTGTaGCGCCACTTCAGGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QLTRSGVPTGSPRQCRRSKMTSV*RHFRST Trigger: GGTAGACCTGAAGTGGCGTCACACGCTGGTCATCTT...GGACCTCCTACATTGCCGAGGAGATCCAGTGGGGACACCGCTTCGTGTCAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACGGTTCTCCGCTGCGATaGGCGCCAGCACATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDGSPLR*APAHTP Trigger: AGGAGTATGTGCTGGCGCGCATCGCAGCGGAGAACC...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGAGTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGGGAGACGGTCGCGGATaGGCGGTTTGCGCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGVMNCTLGTMREELFLLGDGRG*AVCAGS Trigger: AGAACCTGCGCAAACCGCGCATCCGCGACCGTCTCC...CAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGGCTCCGCTCTTGGCGATaGAGCGGGCTTTGGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASMFYRITQRVTPISHTGLRSWR*SGLWGD Trigger: GTCTCCCCAAAGCCCGCTTCATCGCCAAGAGCGGAG...CCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | GTCCTGCTGATGAATAGGCACCACCTCCCCTTCTGGCGTCGTGGTTTTCTTGACGGTCTACCAAGGTGGTaGAGATGTCCTGCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLMNRHHLPFWRRGFLDGLPRW*RCPAGS Trigger: GCTTCCTGCAGGACATCTTCACCACCTTGGTAGACC...GTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTGCCTATTCATCAGCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR TCA 90 bp | ACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCACACCCACCCGGAACATaGAGCACAGCTTGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: THRVNPGRLSTLPLLEGAHPPGT*STACHC Trigger: GCAATGGCAAGCTGTGCTTCATGTTCCGGGTGGGTG...TGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACGGAGACGGTCGCGGATaGGCGGTTTGCGCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHTTCYPHITHWVNPTSHGDGRG*AVCAGS Trigger: AGAACCTGCGCAAACCGCGCATCCGCGACCGTCTCC...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | TCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGGAAAATCAGCGTCTCTaGCCTTCTGTGGGCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHTVLTQDVSLLCPYLRVENQRL*PSVGLR Trigger: GCGCAGGCCCACAGAAGGGCAGAGACGCTGATTTTC...CACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTCATACTCCTCCGGGATaGTGCTCTTCCTGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPHTPPG*CSSWPT Trigger: TGTTGGCCAGGAAGAGCATCATCCCGGAGGAGTATG...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTGCAGAATCAAAACCGTaGTGGCCAGAGGGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPAESKP*WPEGIP Trigger: AGGAATGCCCTCTGGCCATCACGGTTTTGATTCTGC...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTTCCGTGCTTGTGTGGTaGTGCCTGTGGTTTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPSVLVW*CLWFLP Trigger: TGGTAGAAACCACAGGCATCACCACACAAGCACGGA...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACCTCCTCAGTCACAATTaGCACGAAGCGGTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDLLSHN*HEAVSP Trigger: TGGGGACACCGCTTCGTGTCAATTGTGACTGAGGAG...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | GTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAGTCTTGTGTGCCAGGTTaGAGGCTCCGCTCTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VMNCTLGTMREELFLLMESCVPG*RLRSWR Trigger: TCGCCAAGAGCGGAGCCTGCAACCTGGCACACAAGA...CTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR CCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTCACCACCTCCCCTTCTaGCGTCGTGGTTTTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPHHLPF*RRGFLD Trigger: GTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTG...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | GTCATGAACTGCACCTTGGGCACCATGAGGGAAGAGTTATTCCTCCTGATGGAGCATACTCCTCCGGGATaGTGCTCTTCCTGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VMNCTLGTMREELFLLMEHTPPG*CSSWPT Trigger: TGTTGGCCAGGAAGAGCATCATCCCGGAGGAGTATG...CTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGAAATGAATTCAAGCCCCAGACTCTGAATAAAAGGCTACCCAGCTGCCCACTCCGCTCTTGGCGATaGAGCGGGCTTTGGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRNEFKPQTLNKRLPSCPLRSWR*SGLWGD Trigger: GTCTCCCCAAAGCCCGCTTCATCGCCAAGAGCGGAG...TGGGCAGCTGGGTAGCCTTTTATTCAGAGTCTGGGGCTTGAATTCATTTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | TCAATCACGTGGCAGATGATCAATGGGGCCACTAGGAAGATATTATTGCTCTCGGCGCAGGTTCTCCGCTaGGATGCGCGCCAGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: SITWQMINGATRKILLLSAQVLR*DARQHI Trigger: TATGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGC...CGAGAGCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR GCA 90 bp | CATGGAGTTGCGCTTCCGCAGAGAATTCTGGTGCGACAGTTCGCTCTTTTGGAGGTGGTGAAGATGTCCTaGAGGAAGCGACCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVALPQRILVRQFALLEVVKMS*RKRPCS Trigger: AGAGCAAGGTCGCTTCCTGCAGGACATCTTCACCAC...CTCCAAAAGAGCGAACTGTCGCACCAGAATTCTCTGCGGAAGCGCAACTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACGTGGTGAAGATGTCCTaGAGGAAGCGACCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDVVKMS*RKRPCS Trigger: AGAGCAAGGTCGCTTCCTGCAGGACATCTTCACCAC...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGGCGTCGTGGTTTTCTTGACCACCTGGATGCGCACCGAGGCGCTAATGCACTCTTCTCCATGGTaGCTTTCTCCATGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSGVVVFLTTWMRTEALMHSSPW*LSPCKH Trigger: ATGCTTACATGGAGAAAGGCACCATGGAGAAGAGTG...CATTAGCGCCTCGGTGCGCATCCAGGTGGTCAAGAAAACCACGACGCCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR GCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTAGCACAGCTTGCCATTaGGGACGGCAATCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPSTACH*GRQSQH Trigger: ATGCTGTGATTGCCGTCCGCAATGGCAAGCTGTGCT...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTCTGGAGTCATGAACTaGACCTTGGGCACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPSGVMN*TLGTMR Trigger: CCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGA...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTCGCTTGTCAATCACGTaGCAGATGATCAATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPRLSIT*QMINGA Trigger: GGCCCCATTGATCATCTGCCACGTGATTGACAAGCG...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAGTTGTTTCTCCTCATaGAGTTGCGCTTCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPSCFSS*SCASAE Trigger: CTCTGCGGAAGCGCAACTCCATGAGGAGAAACAACT...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| 3UTR CAA 72 bp | GTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTaGAGGGTGCAGGACCTAAGAATGACGAAACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTQDVSLLCPY*RVQDLRMTKLG Trigger: GCCCAGTTTCGTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGGAAGATGACCAGCGTGTaGCGCCACTTCAGGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: ASMFYRITQRVTPISHTGKMTSV*RHFRST Trigger: GGTAGACCTGAAGTGGCGTCACACGCTGGTCATCTT...CCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTATGACCTCCAGGTCTTaGTTGGCAAGGTCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPMTSRS*LARSVA Trigger: AGCAACTGACCTTGCCAATCAAGACCTGGAGGTCAT...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACTGCAGGAAGCGACCTTaGTCTCGGATGTTCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDCRKRP*SRMFLC Trigger: ACACAAGAACATCCGAGAGCAAGGTCGCTTCCTGCA...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACCCTCCAGGTCTTGATTaGCAAGGTCAGTTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDPPGLD*QGQLLR Trigger: TCTCAGCAACTGACCTTGCCAATCAAGACCTGGAGG...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAATCACAGCATGGCGGCTaGAAATCAGCGTCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKHRPTDLTTETAGKKTESQHGG*KSASLP Trigger: GGGCAGAGACGCTGATTTTCAGCCGCCATGCTGTGA...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGGTTCCTTCTGGAGTCATaGACTGCACCTTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASMFYRITQRVTPISHTGFLLES*TAPWAP Trigger: TGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAA...CCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAATCTTGTGTGCCAGGTTaGAGGCTCCGCTCTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QKHRPTDLTTETAGKKTESCVPG*RLRSWR Trigger: TCGCCAAGAGCGGAGCCTGCAACCTGGCACACAAGA...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| 3UTR CAA 72 bp | AGGTCAGTTGCTGAGATATCATACAGGGGGCTACGCTaGTCAATCACGTGGCAGATGATCAATGGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSVAEISYRGLR*SITWQMINGAT Trigger: AGTGGCCCCATTGATCATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATGATATCTCAGCAACTGACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR CAA 72 bp | CTTCCGCAGAGAATTCTGGTGCGACAGTTCGCTCTTTaGGAGGGTCTGAATCAGGATGGAAGGCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPQRILVRQFAL*EGLNQDGRLLI Trigger: GATGAGAAGCCTTCCATCCTGATTCAGACCCTCCAAAAGAGCGAACTGTCGCACCAGAATTCTCTGCGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| 3UTR CAA 72 bp | GGACACTGGTTTCCTTCTGGAGTCATGAACTGCACCTaGGGCACCATGAGGGAAGAGTTATTCCTCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GHWFPSGVMNCT*GTMREELFLLM Trigger: CATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAAACCAGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR TCA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGGCAAGGTCAGTTGCTaGGATATCATACAGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQKHRPTDLTTETAGKKTGKVSC*DIIQGA Trigger: AGCCCCCTGTATGATATCTCAGCAACTGACCTTGCC...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACCTCTTTTGGAGGGTCTaGATCAGGATGGAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHTTCYPHITHWVNPTSHLFWRV*IRMEGF Trigger: GAAGCCTTCCATCCTGATTCAGACCCTCCAAAAGAG...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACCACTCTTCTCCATGGTaGCTTTCTCCATGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDHSSPW*LSPCKH Trigger: ATGCTTACATGGAGAAAGGCACCATGGAGAAGAGTG...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | AGCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGGCAGCCCAACATGACTaGGTTGATGATCAGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFHVLPHHTTCYPHITHWAAQHD*VDDQTH Trigger: GTGGGTCTGATCATCAACGCAGTCATGTTGGGCTGC...CCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTCACTTGAACCTCAATaGAGAAGAGAAACGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPSLEPQ*RRETQT Trigger: CGTCTGCGTTTCTCTTCTCCATTGAGGTTCAAGTGA...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAACGGCAATCACAGCATaGCGGCTGAAAATCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQKHRPTDLTTETAGKKTTAITA*RLKISV Trigger: GACGCTGATTTTCAGCCGCCATGCTGTGATTGCCGT...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAAGTTTTCTTGACCACCTaGATGCGCACCGAGGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKHRPTDLTTETAGKKTEVFLTT*MRTEAL Trigger: TAGCGCCTCGGTGCGCATCCAGGTGGTCAAGAAAAC...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAACAATCACGTGGCAGATaGTCAATGGGGCCACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKHRPTDLTTETAGKKTEQSRGR*SMGPLG Trigger: TCCTAGTGGCCCCATTGATCATCTGCCACGTGATTG...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | ACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAAGTTGTTTCTCCTCATaGAGTTGTTTCTCCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: THRVNPGRLSTLPLLEGASCFSS*SCFSSW Trigger: CCATGAGGAGAAACAACTCCATGAGGAGAAACAACT...TGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAAAATGTAGGAGGTCCGTaGTTGTGTGGTGATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKHRPTDLTTETAGKKTENVGGP*LCGDAC Trigger: ACAGGCATCACCACACAAGCACGGACCTCCTACATT...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | TCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCCGTGTTACCAAATTTaGAATAGTCCACAGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SHTVLTQDVSLLCPYLRVPCYQI*NSPQST Trigger: TGTACTCTGTGGACTATTCCAAATTTGGTAACACGG...CACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR GCA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAATTCTCCTCATGGAGTTaGGCTTCCGCAGAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHRPTDLTTETAGKKTEFSSWS*ASAENS Trigger: AGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAA...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CCA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGATTCTGATGGACACTaGTTTCCTTCTGGAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQKHRPTDLTTETAGKKTDSDGH*FPSGVM Trigger: CATGACTCCAGAAGGAAACCAGTGTCCATCAGAATC...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGAAGAGTTATTCCTCCTaGTGGAGTTGTTTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFHVLPHHTTCYPHITHWKSYSS*WSCFSS Trigger: TGAGGAGAAACAACTCCATCAGGAGGAATAACTCTT...CCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| 3UTR CAA 72 bp | TGGCAGATGATCAATGGGGCCACTAGGAAGATATTATaGCTCTCGATGGGATTATCAACAGGAATGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WQMINGATRKIL*LSMGLSTGMSC Trigger: GCAGGACATTCCTGTTGATAATCCCATCGAGAGCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR CCA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACTATTATTGCTCTCGATaGGATTATCAACAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HHTTCYPHITHWVNPTSHYYCSR*DYQQEC Trigger: ACATTCCTGTTGATAATCCCATCGAGAGCAATAATA...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| 3UTR CAA 72 bp | TTTATTAAACAGGCAAGCAGGGCTTCAGGTACCTGTTaGATCTTTGAGTCTGGAGTTCCAAGTCAGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: FIKQASRASGTC*IFESGVPSQTF Trigger: AAATGTCTGACTTGGAACTCCAGACTCAAAGATCAAACAGGTACCTGAAGCCCTGCTTGCCTGTTTAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS GCA 90 bp | TTTGGGGAGACGGTCGCGGATGCGCGGTTTGCGCAGGTTCTCCGCTaGGATGCGCGCCAGCACATACTCCTCCGGGATGATGCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGETVADARFAQVLR*DARQHILLRDDALP Trigger: AGGAAGAGCATCATCCCGGAGGAGTATGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGACCGTCTCCCCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | GTCCTGCTGATGAATAGGCACCACCTCCCCTTCTGGCGTCGTGGTTTTCTTGACTCGCGGATGCGCGGTTaGCGCAGGTTCTCCGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLLMNRHHLPFWRRGFLDSRMRG*RRFSAA Trigger: CGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGA...GTCAAGAAAACCACGACGCCAGAAGGGGAGGTGGTGCCTATTCATCAGCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR CAA 90 bp | CAATTGACACGAAGCGGTGTCCCCACTGGATCTCCTCGGCAATGTAGGAGGTCCGCGATGAAGCGGGCTTaGGGGAGACGGTCGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QLTRSGVPTGSPRQCRRSAMKRA*GRRSRM Trigger: CATCCGCGACCGTCTCCCCAAAGCCCGCTTCATCGC...GGACCTCCTACATTGCCGAGGAGATCCAGTGGGGACACCGCTTCGTGTCAATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR CAA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTCGCGGATGCGCGGTTaGCGCAGGTTCTCCGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPSRMRG*RRFSAA Trigger: CGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGA...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | GCTCCCGGGCACTGCATCTTGGCGCAGCCACTCTCACCGTGTTACCAAATTTGGTTCTTGTGTGCCAGGTaGCAGGCTCCGCTCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APGHCILAQPLSPCYQIWFLCAR*QAPLLA Trigger: CGCCAAGAGCGGAGCCTGCAACCTGGCACACAAGAA...CCAAATTTGGTAACACGGTGAGAGTGGCTGCGCCAAGATGCAGTGCCCGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS GCA 90 bp | CATTGGTCACACAGACAGCGGACTCCAGGCCACTCTTCTCCATGGTaGCTTTCTCCATGTAAGCATAGATGTCCCCGTGGGCGAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HWSHRQRTPGHSSPW*LSPCKHRCPRGRRP Trigger: TGGCCTTCGCCCACGGGGACATCTATGCTTACATGGAGAAAGGCACCATGGAGAAGAGTGGCCTGGAGTCCGCTGTCTGTGTGACCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGCGATGAAGCGGGCTTaGGGGAGACGGTCGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AQKHRPTDLTTETAGKKTAMKRA*GRRSRM Trigger: CATCCGCGACCGTCTCCCCAAAGCCCGCTTCATCGC...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTGTTTCTCCTCATGGAGTTGCGCTTCCGCAGAGAATTCTGGTGCGACATTGCAGGCTCCGCTCTaGGCGATGAAGCGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSCFSSWSCASAENSGATLQAPL*AMKRAL Trigger: CAAAGCCCGCTTCATCGCCAAGAGCGGAGCCTGCAA...TGTCGCACCAGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAAACAACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR CAA 90 bp | GTTAACCCCACATCACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTCCTCCTCAGTCACAATaGACACGAAGCGGTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VNPTSHTVLTQDVSLLCPPPQSQ*TRSGVP Trigger: GGGGACACCGCTTCGTGTCAATTGTGACTGAGGAGG...AGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTGTCATGAACTGCACCTaGGGCACCATGAGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVNPGRLSTLPLLEGAGPVMNCT*GTMREE Trigger: CTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGAC...AGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACTTCTTGTGTGCCAGGTaGCAGGCTCCGCTCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HHTTCYPHITHWVNPTSHFLCAR*QAPLLA Trigger: CGCCAAGAGCGGAGCCTGCAACCTGGCACACAAGAA...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACAAGCACAGCTTGCCATaGCGGACGGCAATCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDKHSLP*RTAITA Trigger: TGCTGTGATTGCCGTCCGCAATGGCAAGCTGTGCTT...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGGCGTCGTGGTTTTCTaGACCACCTGGATGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AQKHRPTDLTTETAGKKTGVVVF*TTWMRT Trigger: GGTGCGCATCCAGGTGGTCAAGAAAACCACGACGCC...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CCGCATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACCCAACATGACTGCGTaGATGATCAGACCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: PHHTTCYPHITHWVNPTSPNMTA*MIRPTM Trigger: CATCGTGGGTCTGATCATCAACGCAGTCATGTTGGG...TGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | ACACACCGTGTTAACCCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCATATGACCTCCAGGTCTaGATTGGCAAGGTCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: THRVNPGRLSTLPLLEGAYDLQV*IGKVSC Trigger: GCAACTGACCTTGCCAATCAAGACCTGGAGGTCATA...TGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGACGTCTCTCTACTCTGCCCTTACTTGAGGGTGCAGGACCTAAGAATGACTTTCTCCTCATGGAGTaGCGCTTCCGCAGAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: PGRLSTLPLLEGAGPKNDFLLME*RFRREF Trigger: GAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAAA...GTCATTCTTAGGTCCTGCACCCTCAAGTAAGGGCAGAGTAGAGAGACGTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACATGCTCTCGGATGTTCTaGTGTGCCAGGTTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQKHRPTDLTTETAGKKTCSRMF*CARLQA Trigger: AGCCTGCAACCTGGCACACAAGAACATCCGAGAGCA...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | GCTCAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACATACAGGGGGCTACGCTaGTCAATCACGTGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AQKHRPTDLTTETAGKKTYRGLR*SITWQM Trigger: CATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTA...TGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | TCAATCACGTGGCAGATGATCAATGGGGCCACTAGGAAGATATTATTGCTCTCGTGCTCTCGGATGTTCTaGTGTGCCAGGTTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SITWQMINGATRKILLLSCSRMF*CARLQA Trigger: AGCCTGCAACCTGGCACACAAGAACATCCGAGAGCA...CGAGAGCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032374.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCATGTTTTACCGCATCACACAACGTGTTACCCCCATATCACACACTGGGCGACAGTTCGCTCTTTaGGAGGGTCTGAATCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASMFYRITQRVTPISHTGRQFAL*EGLNQD Trigger: ATCCTGATTCAGACCCTCCAAAAGAGCGAACTGTCG...CCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAACACAGGCCAACTGACCTGACTACAGAGACTGCTGGGAAGAAAACAGAAAACATGAAGCACAGCTaGCCATTGCGGACGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QKHRPTDLTTETAGKKTENMKHS*PLRTAI Trigger: GATTGCCGTCCGCAATGGCAAGCTGTGCTTCATGTT...TTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS-3UTR CAA 90 bp | CATCACACAACGTGTTACCCCCATATCACACACTGGGTTAACCCCACATCACACACTAGGAAGATATTATaGCTCTCGATGGGATTATCA | + |
|
Preference number: 5 (lower is better) Translates to: HHTTCYPHITHWVNPTSHTRKIL*LSMGLS Trigger: TGATAATCCCATCGAGAGCAATAATATCTTCCTAGT...GTGTGATGTGGGGTTAACCCAGTGTGTGATATGGGGGTAACACGTTGTGTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
||
| CDS GCA 72 bp | AGCGGGCTTTGGGGAGACGGTCGCGGATGCGCGGTTTaGGCAGGTTCTCCGCTGCGATGCGCGCCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SGLWGDGRGCAV*AGSPLRCAPAH Trigger: ATGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGACCGTCTCCCCAAAGCCCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
||
| CDS CAA 72 bp | AAGCGGGCTTTGGGGAGACGGTCGCGGATGCGCGGTTaGCGCAGGTTCTCCGCTGCGATGCGCGCCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: KRALGRRSRMRG*RRFSAAMRAST Trigger: TGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGACCGTCTCCCCAAAGCCCGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| CDS CAA 90 bp | TTGGCGATGAAGCGGGCTTTGGGGAGACGGTCGCGGATGCGCGGTTaGCGCAGGTTCTCCGCTGCGATGCGCGCCAGCACATACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LAMKRALGRRSRMRG*RRFSAAMRASTYSS Trigger: GGAGGAGTATGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGACCGTCTCCCCAAAGCCCGCTTCATCGCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| CDS TCA 72 bp | TCTTGTGTGCCAGGTTGCAGGCTCCGCTCTTGGCGATaGAGCGGGCTTTGGGGAGACGGTCGCGGATGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SCVPGCRLRSWR*SGLWGDGRGCA Trigger: CGCGCATCCGCGACCGTCTCCCCAAAGCCCGCTTCATCGCCAAGAGCGGAGCCTGCAACCTGGCACACAAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| CDS GCA 72 bp | ACGGTCGCGGATGCGCGGTTTGCGCAGGTTCTCCGCTaGGATGCGCGCCAGCACATACTCCTCCGGGATGAT | + |
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Preference number: 6 (lower is better) Translates to: TVADARFAQVLR*DARQHILLRDD Trigger: ATCATCCCGGAGGAGTATGTGCTGGCGCGCATCGCAGCGGAGAACCTGCGCAAACCGCGCATCCGCGACCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| CDS GCA 72 bp | CACAGACAGCGGACTCCAGGCCACTCTTCTCCATGGTaGCTTTCTCCATGTAAGCATAGATGTCCCCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: HRQRTPGHSSPW*LSPCKHRCPRG Trigger: CCCACGGGGACATCTATGCTTACATGGAGAAAGGCACCATGGAGAAGAGTGGCCTGGAGTCCGCTGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| CDS CCA 72 bp | TCACACAGACAGCGGACTCCAGGCCACTCTTCTCCATaGTGCCTTTCTCCATGTAAGCATAGATGTCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: SHRQRTPGHSSP*CLSPCKHRCPR Trigger: ACGGGGACATCTATGCTTACATGGAGAAAGGCACCATGGAGAAGAGTGGCCTGGAGTCCGCTGTCTGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032374.9 ENSMUST00000203945.3 |
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| CDS CAA 72 bp | ATGGAGAAGAGAAACGCAGACGTGAATGACCTGACATaGGTCACACAGACAGCGGACTCCAGGCCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: MEKRNADVNDLT*VTQTADSRPLF Trigger: GAAGAGTGGCCTGGAGTCCGCTGTCTGTGTGACCAATGTCAGGTCATTCACGTCTGCGTTTCTCTTCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203945.3 |
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