Pregenerated sensors for KCNJ4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044216Ensembl transcript IDs: ENSMUST00000057801.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAACTGGAGGGACTGCAAGGAGGGAGGGGTACTCATCCTACCTCTaGGTCCCCTCTGTACCCAAACCCAACACCATACAGAGCCGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ETGGTARREGYSSYL*VPSVPKPNTIQSRL Trigger: AAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAGGGGACTCAGAGGTAGGATGAGTACCCCTCCCTCCTTGCAGTCCCTCCAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CCA 90 bp | GGGTTGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTaGACTTGTGTCTCCATCTCTTCCATTTATAGATATTTACAAAAG | + |
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Preference number: 1 (lower is better) Translates to: GLAASLCLTGRNGQR*TCVSISSIYRYLQK Trigger: CTTTTGTAAATATCTATAAATGGAAGAGATGGAGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CCA 90 bp | TGCTTTATTAAAAATAGTTACAAACGCCGTCATCAATCTGGAAACTaGAGGGACTGCAAGGAGGGAGGGGTACTCATCCTACCTCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: CFIKNSYKRRHQSGN*RDCKEGGVLILPLS Trigger: ACTCAGAGGTAGGATGAGTACCCCTCCCTCCTTGCAGTCCCTCCAGTTTCCAGATTGATGACGGCGTTTGTAACTATTTTTAATAAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CAA 90 bp | AGCTGGGTCGGGCTGAGGCTGGACGGGGGAGTGCACAGAGAGGGGTaGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SWVGLRLDGGVHREG*AASLCLTGRNGQRW Trigger: CCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCCCTCTCTGTGCACTCCCCCGTCCAGCCTCAGCCCGACCCAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR CCA 90 bp | GTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGCGGCCCAGAGCCACCGTaGGGAGATGCCAGGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VPKPNTIQSRLQRSQGTSGPEPP*GDARGP Trigger: GGGCCCCCTGGCATCTCCCCACGGTGGCTCTGGGCC...GCTGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCCAGCTGGGTCGGGCTaGGGCTGGACGGGGGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCTQTQHHTEPASKVSRDPAGSG*GWTGEC Trigger: GCACTCCCCCGTCCAGCCTCAGCCCGACCCAGCTGG...GTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGAGAGGGGTTGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGCCACCGTGGGGAGATaGCAGGGGGCCCTGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: CTERGWQPLSVSQVEMGRATVGR*QGALGH Trigger: ATGGCCCAGGGCCCCCTGGCATCTCCCCACGGTGGC...TCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCCCTCTCTGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGCTGGCGTCCCACCCCTaGCAGAGGCTCTTGCGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CTQTQHHTEPASKVSRDQLASHP*QRLLRE Trigger: TTCCCGCAAGAGCCTCTGCCAGGGGTGGGACGCCAG...CTGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CAA 90 bp | TCCAGTCCTGGGCCCTGTAGTCAACAGGAAGGGATCTCCCAGTCTTaGAAGCCCCCACCTTCCTCTAGGTCCACAGAGCCACGTTCAACT | + |
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Preference number: 2 (lower is better) Translates to: SSPGPCSQQEGISQS*KPPPSSRSTEPRST Trigger: AGTTGAACGTGGCTCTGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGATCCCTTCCTGTTGACTACAGGGCCCAGGACTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGGACTTGTGTCTCCATCCCTGGCAGAGGCTCTTaGGGGAATAGAGGAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASLCLTGRNGQRWTCVSIPGRGS*GNRGGQ Trigger: CTGCCCTCCTCTATTCCCGCAAGAGCCTCTGCCAGG...GATGGAGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGAAAGGGTGGAAGATCTaGGGGCCCAGAGCCACCGTG | + |
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Preference number: 2 (lower is better) Translates to: CTQTQHHTEPASKVSRDQKGWKI*GPRATV Trigger: CACGGTGGCTCTGGGCCCCCAGATCTTCCACCCTTT...CTGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR CCA 90 bp | GTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGCAGAAATGGGCAGAGGTaGACTTGTGTCTCCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: VPKPNTIQSRLQRSQGTSRNGQR*TCVSIS Trigger: AGAGATGGAGACACAAGTCCACCTCTGCCCATTTCT...GCTGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR GCA 90 bp | TGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGCACAGACCACAGTCATaGAAAAGAAACACACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: CTQTQHHTEPASKVSRDQHRPQS*KRNTPF Trigger: GAAGGGTGTGTTTCTTTTGCATGACTGTGGTCTGTG...CTGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATATGCTTTATTAAAAATAGTTACAAACGCCGTCATCAATCTGGAAACTGGTCCTTGAAGGGTCAGTaGGAAAAGGGTGGAAGATCT | + |
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Preference number: 2 (lower is better) Translates to: TICFIKNSYKRRHQSGNWSLKGQ*EKGGRS Trigger: AGATCTTCCACCCTTTTCCCACTGACCCTTCAAGGA...CCAGTTTCCAGATTGATGACGGCGTTTGTAACTATTTTTAATAAAGCATATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CCA 72 bp | GGCCCAGAGCCACCGTGGGGAGATGCCAGGGGGCCCTaGGCCATCAGGGCGGAGTACCTGGGTCCTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GPEPPWGDARGP*AIRAEYLGPFQ Trigger: CTGGAAAGGACCCAGGTACTCCGCCCTGATGGCCCAGGGCCCCCTGGCATCTCCCCACGGTGGCTCTGGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR TCA 72 bp | TCAAAGGTCTCAAGGGACCAGCCAGCTGGGTCGGGCTaGGGCTGGACGGGGGAGTGCACAGAGAGGGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: SKVSRDQPAGSG*GWTGECTERGW Trigger: CCAACCCCTCTCTGTGCACTCCCCCGTCCAGCCTCAGCCCGACCCAGCTGGCTGGTCCCTTGAGACCTTTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CCA 72 bp | ATGCCAGGGGGCCCTGGGCCATCAGGGCGGAGTACCTaGGTCCTTTCCAGTCCTGGGCCCTGTAGTCAACAG | + |
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Preference number: 3 (lower is better) Translates to: MPGGPGPSGRST*VLSSPGPCSQQ Trigger: CTGTTGACTACAGGGCCCAGGACTGGAAAGGACCCAGGTACTCCGCCCTGATGGCCCAGGGCCCCCTGGCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR TCA 72 bp | GGGACTGCAAGGAGGGAGGGGTACTCATCCTACCTCTaGGTCCCCTCTGTACCCAAACCCAACACCATACAG | + |
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Preference number: 3 (lower is better) Translates to: GTARREGYSSYL*VPSVPKPNTIQ Trigger: CTGTATGGTGTTGGGTTTGGGTACAGAGGGGACTCAGAGGTAGGATGAGTACCCCTCCCTCCTTGCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CCA 72 bp | AAAAATAGTTACAAACGCCGTCATCAATCTGGAAACTaGAGGGACTGCAAGGAGGGAGGGGTACTCATCCTA | + |
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Preference number: 3 (lower is better) Translates to: KNSYKRRHQSGN*RDCKEGGVLIL Trigger: TAGGATGAGTACCCCTCCCTCCTTGCAGTCCCTCCAGTTTCCAGATTGATGACGGCGTTTGTAACTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CCA 72 bp | GCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTaGACTTGTGTCTCCATCTCTTCCATTTATAGATAT | + |
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Preference number: 3 (lower is better) Translates to: ASLCLTGRNGQR*TCVSISSIYRY Trigger: ATATCTATAAATGGAAGAGATGGAGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CCCAGCAGTCCAGCCGCCTTCCCCGAGGTCCTGAGAGCAGAAGGGGTACATCCTTGCAGCCACGGCTGCTaGGGCCGCAGCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSSPAAFPEVLRAEGVHPCSHGC*GRSLLF Trigger: GAAGAGGAGGCTGCGGCCGCAGCAGCCGTGGCTGCA...AGGATGTACCCCTTCTGCTCTCAGGACCTCGGGGAAGGCGGCTGGACTGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | GGCCCTGGGCCATCAGGGCGGAGTACCTGGGTCCTTTCCAGTCCTGGGCCCTGTCGGGCACAGAGGGACTaGCCTCCAGGTCACCATGGA | + |
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Preference number: 4 (lower is better) Translates to: GPGPSGRSTWVLSSPGPCRAQRD*PPGHHG Trigger: TCCATGGTGACCTGGAGGCCAGTCCCTCTGTGCCCG...ACAGGGCCCAGGACTGGAAAGGACCCAGGTACTCCGCCCTGATGGCCCAGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | GCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGGACTTGTGTCTCCATCTGCGGCGTTTCCGCCTaGGCACGTGGGCCTGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: ASLCLTGRNGQRWTCVSICGVSA*ARGPAR Trigger: ACGGGCAGGCCCACGTGCCCAGGCGGAAACGCCGCA...GATGGAGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGCATAGCAGAAGGCACTaGGAGGGGGCGGTGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PSVPKPNTIQSRLQRSQGHSRRH*EGAVGR Trigger: CCGCCCCACCGCCCCCTCCCAGTGCCTTCTGCTATG...CCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | CAACAGGAAGGGATCTCCCAGTCTTTGAAGCCCCCACCTTCCTCTAGGTCCACAGGGCGGGCAGCACCGTaGTCTTGCTCTCCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QQEGISQSLKPPPSSRSTGRAAP*SCSPAA Trigger: AGCTGCAGGAGAGCAAGATCACGGTGCTGCCCGCCC...TGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGATCCCTTCCTGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCAGTCCAGCCGCCTTCCCCGAGGTCCTGAGAGCAGAAGGGGTACATCCTGAGATGACAGCATGGTaGCTGAACAGCAGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PSSPAAFPEVLRAEGVHPEMTAW*LNSRVC Trigger: ACAGACCCTGCTGTTCAGCCACCATGCTGTCATCTC...AGGATGTACCCCTTCTGCTCTCAGGACCTCGGGGAAGGCGGCTGGACTGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGGGGTACATCCTTGAAGGGTCAGTGGGAAAAGGGTGGAAGATCTGGGCTGGGCACGTGGGCCTaGCCGTTTCGGTTGTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SRRGTSLKGQWEKGGRSGLGTWA*PFRLCP Trigger: CGGACACAACCGAAACGGGCAGGCCCACGTGCCCAG...CCCAGATCTTCCACCCTTTTCCCACTGACCCTTCAAGGATGTACCCCTTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | TGCACAGAGAGGGGTTGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGTCCCGCTGGTCCAGTaGCAGGTACTCACCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CTERGWQPLSVSQVEMGRVPLVQ*QVLTLL Trigger: CAGGAGGGTGAGTACCTGCCACTGGACCAGCGGGAC...TCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCCCTCTCTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | ATCTCCCAGTCTTTGAAGCCCCCACCTTCCTCTAGGTCCACAGAGCCACGTTCACCGCGGAGAAGATCATaGGCATATAGCGCCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: ISQSLKPPPSSRSTEPRSPRRRS*AYSASA Trigger: CGCGCTGGCGCTATATGCTCATGATCTTCTCCGCGG...TGAACGTGGCTCTGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | AAGGAGGGAGGGGTACTCATCCTACCTCTGAGTCCCCTCTGTACCCAAACCCAAGCTCCTCCTTGCCCATaGCGTAGAGTGGGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KEGGVLILPLSPLCTQTQAPPCP*RRVGCP Trigger: AGGACAGCCCACTCTACGGCATGGGCAAGGAGGAGC...TTGGGTTTGGGTACAGAGGGGACTCAGAGGTAGGATGAGTACCCCTCCCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGGTGATCTTGCTCTCCTaGAGCTCACGGGCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSVPKPNTIQSRLQRSQGVILLS*SSRAEQ Trigger: CTGCTCCGCCCGTGAGCTGCAGGAGAGCAAGATCAC...CCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCTCCTCTTTGGAACCTaGCTCCAGGCCCAGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCTQTQHHTEPASKVSRDLLFGT*LQAQAC Trigger: GCAGGCCTGGGCCTGGAGGCAGGTTCCAAAGAGGAG...GTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | GAGGGGTTGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGGACTGCCCATGCCGTAGAGTaGGCTGTCCTCGTCGATTTC | + |
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Preference number: 4 (lower is better) Translates to: EGLAASLCLTGRNGQRWTAHAVE*AVLVDF Trigger: GAAATCGACGAGGACAGCCCACTCTACGGCATGGGC...AGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| 3UTR CAA 72 bp | GGGCCCTGTAGTCAACAGGAAGGGATCTCCCAGTCTTaGAAGCCCCCACCTTCCTCTAGGTCCACAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPCSQQEGISQS*KPPPSSRSTEP Trigger: TGGCTCTGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGATCCCTTCCTGTTGACTACAGGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | GCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGGACTTGTGTCTCCATCTGTCATAGCCCACGTTaGGGTCCCGCTGGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ASLCLTGRNGQRWTCVSICHSPR*GPAGPV Trigger: CACTGGACCAGCGGGACCTCAACGTGGGCTATGACA...GATGGAGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACACTCCAGCTCCTCCTTaGCCATGCCGTAGAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LCTQTQHHTEPASKVSRDTPAPP*PCRRVG Trigger: GCCCACTCTACGGCATGGGCAAGGAGGAGCTGGAGT...GTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | TGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGACGTTGAGGTCCCGCTaGTCCAGTGGCAGGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: CTQTQHHTEPASKVSRDQTLRSR*SSGRYS Trigger: TGAGTACCTGCCACTGGACCAGCGGGACCTCAACGT...CTGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | ATCTCCCAGTCTTTGAAGCCCCCACCTTCCTCTAGGTCCACAGAGCCACGTTCACGCTCCAGATCCAGGTaGCTGCCAAACTCAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: ISQSLKPPPSSRSTEPRSRSRSR*LPNSSI Trigger: GATGCTTGAGTTTGGCAGCCACCTGGATCTGGAGCG...TGAACGTGGCTCTGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | CTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCATGTCCACGCAGGTGGTaGAGATGTCTGCCATGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LYPNPTPYRAGFKGLKGPCPRRW*RCLPCS Trigger: GCTACATGGCAGACATCTTCACCACCTGCGTGGACA...TGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | TGCACAGAGAGGGGTTGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAAATCTCAAAGTCCTCTaGCTCCAGCTCCTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: CTERGWQPLSVSQVEMGRNLKVL*LQLLLA Trigger: GGCAAGGAGGAGCTGGAGTCAGAGGACTTTGAGATT...TCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCCCTCTCTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CAACAGGAAGGGATCTCCCAGTCTTTGAAGCCCCCACCTTCCTCTAGGTCCACACATCCGGATAATGCCTaGCTCCTCTTTGGAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: QQEGISQSLKPPPSSRSTHPDNA*LLFGTC Trigger: GCAGGTTCCAAAGAGGAGGCAGGCATTATCCGGATG...TGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGATCCCTTCCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | CTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAGCCTCCAGGTCACCATaGAAGAAGGCAATGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LYPNPTPYRAGFKGLKGPASRSP*KKAMHQ Trigger: CTGGTGCATTGCCTTCTTCCATGGTGACCTGGAGGC...TGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGGGGTACATCCTTGAAGGGTCAGTGGGAAAAGGGTGGAAGATCTGGGACGGAGATGACAGCATaGTGGCTGAACAGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SRRGTSLKGQWEKGGRSGTEMTA*WLNSRV Trigger: GACCCTGCTGTTCAGCCACCATGCTGTCATCTCCGT...CCCAGATCTTCCACCCTTTTCCCACTGACCCTTCAAGGATGTACCCCTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGAGGGGTACTCATCCTACCTCTGAGTCCCCTCTGTACCCAAACCCAAATCTCCTCTTCCTCCTaGCTCATAAGGGCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KEGGVLILPLSPLCTQTQISSSS*LIRASS Trigger: TGAGCTGGCCCTTATGAGCCAGGAGGAAGAGGAGAT...TTGGGTTTGGGTACAGAGGGGACTCAGAGGTAGGATGAGTACCCCTCCCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | CCCTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGGGTCTTGTGGAATCGTaGGTAGTCCACCTTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: PSVPKPNTIQSRLQRSQGGLVES*VVHLVV Trigger: CACTACAAGGTGGACTACTCACGATTCCACAAGACC...CCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCAAGCGCTGGGACTTGTTaGTCAGGTTGGCGAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LYPNPTPYRAGFKGLKGPSAGTC*SGWRSR Trigger: TCTACTTCGCCAACCTGAGCAACAAGTCCCAGCGCT...TGGTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGGGGTACATCCTTGAAGGGTCAGTGGGAAAAGGGTGGAAGATCTGGGGGTGGTGAAGATGTCTaGCATGTAGCGCTGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: SRRGTSLKGQWEKGGRSGGGEDV*HVALGL Trigger: AAGTCCCAGCGCTACATGGCAGACATCTTCACCACC...CCCAGATCTTCCACCCTTTTCCCACTGACCCTTCAAGGATGTACCCCTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | TGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGGACTTGTGTCTGTGACACCAAGAAGATaGGGTCCAGGCCGATGTCAT | + |
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Preference number: 4 (lower is better) Translates to: WQPLSVSQVEMGRGGLVSVTPRR*GPGRCH Trigger: ATGACATCGGCCTGGACCGCATCTTCTTGGTGTCAC...AGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACCACTATGATGATGGGTaGCACCAAGAAGATGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: LCTQTQHHTEPASKVSRDHYDDG*HQEDAV Trigger: GACCGCATCTTCTTGGTGTCACCCATCATCATAGTG...GTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CCA 90 bp | CAACAGGAAGGGATCTCCCAGTCTTTGAAGCCCCCACCTTCCTCTAGGTCCACAACTTGTTGCTCAGGTTaGCGAAGTAGACGTTACACT | + |
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Preference number: 4 (lower is better) Translates to: QQEGISQSLKPPPSSRSTTCCSG*RSRRYT Trigger: AGTGTAACGTCTACTTCGCCAACCTGAGCAACAAGT...TGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGATCCCTTCCTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | CTCTGTACCCAAACCCAACACCATACAGAGCCGGCTTCAAAGGTCTCAAGGGACTCCTCGTCGATTTCATaGACTATGATGATGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LCTQTQHHTEPASKVSRDSSSIS*TMMMGD Trigger: GTCACCCATCATCATAGTGCATGAAATCGACGAGGA...GTCCCTTGAGACCTTTGAAGCCGGCTCTGTATGGTGTTGGGTTTGGGTACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR GCA 90 bp | TGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGAGGTGGACTTGTGTCTAGATGGCAGATTCCCTaGGATAGGAAATATTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: WQPLSVSQVEMGRGGLVSRWQIP*DRKYCP Trigger: TGGACAATATTTCCTATCGCAGGGAATCTGCCATCT...AGACACAAGTCCACCTCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CAA 90 bp | ATCTCCCAGTCTTTGAAGCCCCCACCTTCCTCTAGGTCCACAGAGCCACGTTCAGGCAGCACCGTGATCTaGCTCTCCTGCAGCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: ISQSLKPPPSSRSTEPRSGSTVI*LSCSSR Trigger: CCGTGAGCTGCAGGAGAGCAAGATCACGGTGCTGCC...TGAACGTGGCTCTGTGGACCTAGAGGAAGGTGGGGGCTTCAAAGACTGGGAGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CCA 90 bp | TTGTCCAGTGGAAGGGTGGCGGCTTGCATGCGCTCCAGATCCAGGTaGCTGCCAAACTCAAGCATCCGGATAATGCCTGCCTCCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LSSGRVAACMRSRSR*LPNSSIRIMPASSL Trigger: CAAAGAGGAGGCAGGCATTATCCGGATGCTTGAGTTTGGCAGCCACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CAA 90 bp | TGCACAGAGAGGGGTTGGCAGCCTCTCTCTGTCTCACAGGTAGAAATGGGCAGATGCATGATACAGGGTTaGGGGGCATTCGGGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: CTERGWQPLSVSQVEMGRCMIQG*GAFGLA Trigger: GGCAAGCCCGAATGCCCCCAAACCCTGTATCATGCA...TCTGCCCATTTCTACCTGTGAGACAGAGAGAGGCTGCCAACCCCTCTCTGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS-3UTR CAA 90 bp | AGCCCCCACCTTCCTCTAGGTCCACAGAGCCACGTTCAACTCTGTCCTAAGAGTTTGGGCCGTGCCATCTaGGCCATGATCGTGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: SPHLPLGPQSHVQLCPKSLGRAI*AMIVPI Trigger: GATTGGCACGATCATGGCCAAGATGGCACGGCCCAA...ACTCTTAGGACAGAGTTGAACGTGGCTCTGTGGACCTAGAGGAAGGTGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CCA 90 bp | AGATGGCAGATTCCCTGCGATAGGAAATATTGTCCAGTGGAAGGGTaGCGGCTTGCATGCGCTCCAGATCCAGGTGGCTGCCAAACTCAA | + |
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Preference number: 5 (lower is better) Translates to: RWQIPCDRKYCPVEG*RLACAPDPGGCQTQ Trigger: TTGAGTTTGGCAGCCACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAATATTTCCTATCGCAGGGAATCTGCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS GCA 72 bp | GGCGGTGGGGCGGGCAGCACCGTGATCTTGCTCTCCTaGAGCTCACGGGCGGAGCAGCAAGGCGTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GGGAGSTVILLS*SSRAEQQGVPA Trigger: GGCTGGCACGCCTTGCTGCTCCGCCCGTGAGCTGCAGGAGAGCAAGATCACGGTGCTGCCCGCCCCACCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CCA 72 bp | GCCGCGGGCACAGAGGGACTGGCCTCCAGGTCACCATaGAAGAAGGCAATGCACCAGAAGAGGAGGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: AAGTEGLASRSP*KKAMHQKRRPK Trigger: CTTCGGCCTCCTCTTCTGGTGCATTGCCTTCTTCCATGGTGACCTGGAGGCCAGTCCCTCTGTGCCCGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CCA 72 bp | GGAAGGGTGGCGGCTTGCATGCGCTCCAGATCCAGGTaGCTGCCAAACTCAAGCATCCGGATAATGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GRVAACMRSRSR*LPNSSIRIMPA Trigger: GGCAGGCATTATCCGGATGCTTGAGTTTGGCAGCCACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CCA 72 bp | ATTCCCTGCGATAGGAAATATTGTCCAGTGGAAGGGTaGCGGCTTGCATGCGCTCCAGATCCAGGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IPCDRKYCPVEG*RLACAPDPGGC Trigger: GCAGCCACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAATATTTCCTATCGCAGGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CAA 90 bp | AGATTCCCTGCGATAGGAAATATTGTCCAGTGGAAGGGTGGCGGCTaGCATGCGCTCCAGATCCAGGTGGCTGCCAAACTCAAGCATCCG | + |
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Preference number: 6 (lower is better) Translates to: RFPAIGNIVQWKGGG*HALQIQVAAKLKHP Trigger: CGGATGCTTGAGTTTGGCAGCCACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAATATTTCCTATCGCAGGGAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS GCA 72 bp | TCTCAAAGTCCTCTGACTCCAGCTCCTCCTTGCCCATaGCGTAGAGTGGGCTGTCCTCGTCGATTTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: SQSPLTPAPPCP*RRVGCPRRFHA Trigger: TGCATGAAATCGACGAGGACAGCCCACTCTACGGCATGGGCAAGGAGGAGCTGGAGTCAGAGGACTTTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS GCA 72 bp | AGGAAATATTGTCCAGTGGAAGGGTGGCGGCTTGCATaGGCTCCAGATCCAGGTGGCTGCCAAACTCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RKYCPVEGWRLA*APDPGGCQTQA Trigger: TGCTTGAGTTTGGCAGCCACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAATATTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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| CDS CCA 72 bp | GATGGCAGATTCCCTGCGATAGGAAATATTGTCCAGTaGAAGGGTGGCGGCTTGCATGCGCTCCAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: DGRFPAIGNIVQ*KGGGLHALQIQ Trigger: CTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAATATTTCCTATCGCAGGGAATCTGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057801.8 |
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