Pregenerated sensors for KCNJ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041695Ensembl transcript IDs: ENSMUST00000042970.3
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTTCGAGGTGAGTCCCTCCATCTGCATACTAGTGGCAGGTGTGTaGACTAGTTCCGGAGGCCCAGTCAATAAAGACAGGTATTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: MFEVSPSICILVAGV*TSSGGPVNKDRYSE Trigger: TTCAGAATACCTGTCTTTATTGACTGGGCCTCCGGAACTAGTGCACACACCTGCCACTAGTATGCAGATGGAGGGACTCACCTCGAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTaGAGAGACCTTAGAAGGACAAGACTAGAGGCCAGACATCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LSLSLSLSLSLSLYL*RDLRRTRLEARHLS Trigger: AGAAAGATGTCTGGCCTCTAGTCTTGTCCTTCTAAGGTCTCTGCAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR TCA 90 bp | GGCCTGCAAAGCACTTTACATCAGTCATCCAGCTTAGTCTTTCCTTaGAACCTTTGTGCTAGCCTTAGTCTCTTGTGGCTGCTTGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GLQSTLHQSSSLVFP*NLCASLSLLWLLAF Trigger: GAAAGCAAGCAGCCACAAGAGACTAAGGCTAGCACAAAGGTTTCAAGGAAAGACTAAGCTGGATGACTGATGTAAAGTGCTTTGCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 90 bp | GCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTTCCCTGCTaGGTGACAGTTTGGAAGGTGCCAGGTTACCAACAAAGTTCAACC | + |
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Preference number: 1 (lower is better) Translates to: AMSQLQNLKSVHLPC*VTVWKVPGYQQSST Trigger: GGTTGAACTTTGTTGGTAACCTGGCACCTTCCAAACTGTCACCCAGCAGGGAAGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR GCA 90 bp | AAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTTCCCTaGTGGGTGACAGTTTGGAAGGTGCCAGGTTACCAACAAAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: KAMSQLQNLKSVHLP*WVTVWKVPGYQQSS Trigger: TGAACTTTGTTGGTAACCTGGCACCTTCCAAACTGTCACCCAGCAGGGAAGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR GCA 90 bp | TGTCATGAAAAAGGAAACTTCCCTCTCACCTGTAAAGTGGATTGCTaGATTGAAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CHEKGNFPLTCKVDC*IESLSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTTCAATGCAGCAATCCACTTTACAGGTGAGAGGGAAGTTTCCTTTTTCATGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 90 bp | TGCAAAAATGAACGGACTGCTTCACACCCTGCTGAAGTTCAAAGATaGTGTCTCTGGATTTCCAAGACAATCTGTGCAGGAGCTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: CKNERTASHPAEVQR*CLWISKTICAGALF Trigger: AAACAAAGCTCCTGCACAGATTGTCTTGGAAATCCAGAGACACCATCTTTGAACTTCAGCAGGGTGTGAAGCAGTCCGTTCATTTTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 90 bp | GAACGGACTGCTTCACACCCTGCTGAAGTTCAAAGATGGTGTCTCTaGATTTCCAAGACAATCTGTGCAGGAGCTTTGTTTCTTTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: ERTASHPAEVQRWCL*ISKTICAGALFLFK Trigger: TTTAAAAAGAAACAAAGCTCCTGCACAGATTGTCTTGGAAATCCAGAGACACCATCTTTGAACTTCAGCAGGGTGTGAAGCAGTCCGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 90 bp | AACCCCATAACTTATACTACAACAGATATGTGCCATCATGTCTCTTaGAGGCCTGCAAAGCACTTTACATCAGTCATCCAGCTTAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: NPITYTTTDMCHHVS*RPAKHFTSVIQLSL Trigger: AAGACTAAGCTGGATGACTGATGTAAAGTGCTTTGCAGGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTTATGGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 90 bp | TATAAGTTAAAAGCTGACGTTTGTTATCTGCAAGGGGAACATCATTaGGGAACCAAGGTCATCAGAGACACATCAAGATTTAGGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: YKLKADVCYLQGEHH*GTKVIRDTSRFRKG Trigger: CCCCTTCCTAAATCTTGATGTGTCTCTGATGACCTTGGTTCCCCAATGATGTTCCCCTTGCAGATAACAAACGTCAGCTTTTAACTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR GCA 90 bp | AAACAATACATTAAAAACCCCATAACTTATACTACAACAGATATGTaGCATCATGTCTCTTGGAGGCCTGCAAAGCACTTTACATCAGTC | + |
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Preference number: 1 (lower is better) Translates to: KQYIKNPITYTTTDM*HHVSWRPAKHFTSV Trigger: GACTGATGTAAAGTGCTTTGCAGGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTTATGGGGTTTTTAATGTATTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR TCA 90 bp | ATTTCCATAACACCAACAGTTTTCAAATCCATTGACTTAGAAAGTTaGAAACAGCAGAAATTGTCAACGTTTCTTACAGGCACTGTATCC | + |
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Preference number: 1 (lower is better) Translates to: ISITPTVFKSIDLES*KQQKLSTFLTGTVS Trigger: GGATACAGTGCCTGTAAGAAACGTTGACAATTTCTGCTGTTTTCAACTTTCTAAGTCAATGGATTTGAAAACTGTTGGTGTTATGGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGATGCTGGGTGACAGTTTaGAAGGTGCCAGGTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: FACNTEATGIWGGAPDVRCWVTV*KVPGYQ Trigger: TTGGTAACCTGGCACCTTCCAAACTGTCACCCAGCA...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | CACTGTATCCAGATACAGAGGCTCACAAGCCACAGACCGGCACAAACATCAACCTGTAACTGTGACCTATaGTTCCCTCCTCCCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HCIQIQRLTSHRPAQTSTCNCDL*FPPPLQ Trigger: TTGGAGGGGAGGAGGGAAGCATAGGTCACAGTTACA...GGTTGATGTTTGTGCCGGTCTGTGGCTTGTGAGCCTCTGTATCTGGATACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR TCA 90 bp | CACTGTATCCAGATACAGAGGCTCACAAGCCACAGACCGGCACAAACATCAACCCTTGGCAACGTGCTCTaGGACTTTCCAAGAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: HCIQIQRLTSHRPAQTSTLGNVL*DFPRDN Trigger: ATTGTCTCTTGGAAAGTCTCAGAGCACGTTGCCAAG...GGTTGATGTTTGTGCCGGTCTGTGGCTTGTGAGCCTCTGTATCTGGATACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAAGCAACTTGCAACCCTaGCTTAAAACCCAGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: FACNTEATGIWGGAPDVRSNLQP*LKTQMY Trigger: GTACATCTGGGTTTTAAGGCAGGGTTGCAAGTTGCT...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAAGTTCATCTTCCCTGCTaGGTGACAGTTTGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LPVPNPANSLSNLQPCLKVHLPC*VTVWKV Trigger: CACCTTCCAAACTGTCACCCAGCAGGGAAGATGAAC...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR TCA 90 bp | CACTGTATCCAGATACAGAGGCTCACAAGCCACAGACCGGCACAAACATCAACCAGTGGATTGCTGCATTaGAAGTCTCTCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HCIQIQRLTSHRPAQTSTSGLLH*KSLSLS Trigger: AGAGAGAGAGAGAGACTTTCAATGCAGCAATCCACT...GGTTGATGTTTGTGCCGGTCTGTGGCTTGTGAGCCTCTGTATCTGGATACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CAA 90 bp | GCTAGAAATGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTaGAAATCTGTTCATCTTCCCTGCTGGGTGACAGTTTGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ARNALAVKAMSQLQN*KSVHLPCWVTVWKV Trigger: CACCTTCCAAACTGTCACCCAGCAGGGAAGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCATTTCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAATGTCTCTTGGAGGCCTaGAAAGCACTTTACATCAGT | + |
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Preference number: 2 (lower is better) Translates to: LPVPNPANSLSNLQPCLKCLLEA*KALYIS Trigger: ACTGATGTAAAGTGCTTTGCAGGCCTCCAAGAGACA...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAAGTTCAACCAAGATCTaGTCTTATGGAACCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: FACNTEATGIWGGAPDVRSSTKI*SYGTNF Trigger: AAAGTTGGTTCCATAAGATCAGATCTTGGTTGAACT...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACATCTTCCCTGCTGGGTaGCAGTTTGGAAGGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDIFPAG*QFGRCQ Trigger: CTGGCACCTTCCAAACTGTCACCCAGCAGGGAAGAT...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAAAAAATAATGAGTCCTTaGCAACGTGCTCTGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LPVPNPANSLSNLQPCLKKIMSP*QRALRL Trigger: AAGTCTCAGAGCACGTTGCCAAGGACTCATTATTTT...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CAA 90 bp | GCTGCAAAATTTGAAATCTGTTCATCTTCCCTGCTGGGTGACAGTTaGGAAGGTGCCAGGTTACCAACAAAGTTCAACCAAGATCTGATC | + |
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Preference number: 2 (lower is better) Translates to: AAKFEICSSSLLGDS*EGARLPTKFNQDLI Trigger: GATCAGATCTTGGTTGAACTTTGTTGGTAACCTGGCACCTTCCAAACTGTCACCCAGCAGGGAAGATGAACAGATTTCAAATTTTGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | GATCTGATCTTATGGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGCTCAGAAAGCCTTAGTCTCTTGTaGCTGCTTGCTTTCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLILWNQLWNVLREKSSESLSLL*LLAFTH Trigger: GTGGGTGAAAGCAAGCAGCCACAAGAGACTAAGGCT...TTCTGAGCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | GATCTGATCTTATGGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGCTCAGAATTAGTCTCTTGTGGCTaGTTGCTTTCACCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: DLILWNQLWNVLREKSSELVSCG*LLSPTS Trigger: AGAGGTGGGTGAAAGCAAGCAGCCACAAGAGACTAA...TTCTGAGCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CAA 90 bp | GGGGTCAGTCCATGTTGTCACCCCCACTCTTTACTGCATCTTCATTaGATTGACATTCCACTGAATACTCTTTGGTTTGATTACTTTACT | + |
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Preference number: 2 (lower is better) Translates to: GVSPCCHPHSLLHLH*IDIPLNTLWFDYFT Trigger: AGTAAAGTAATCAAACCAAAGAGTATTCAGTGGAATGTCAATCAAATGAAGATGCAGTAAAGAGTGGGGGTGACAACATGGACTGACCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTTTCCAAGACAATCTGTaGAGGAGCTTTGTTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CPGSQGYESAAKFEICSSFQDNL*RSFVSF Trigger: AAAAGAAACAAAGCTCCTGCACAGATTGTCTTGGAA...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | GACAGGTATTCTGAAGGTAAAAATGCAGGAAGAGATGCCATGCATTACCTATGTCTCTCACCTGTAAAGTaGATTGCTGCATTGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: DRYSEGKNAGRDAMHYLCLSPVK*IAALKV Trigger: GACTTTCAATGCAGCAATCCACTTTACAGGTGAGAG...ACATAGGTAATGCATGGCATCTCTTCCTGCATTTTTACCTTCAGAATACCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACAGCTTAGTCTTTCCTTaGAACCTTTGTGCTAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDSLVFP*NLCASL Trigger: AAGGCTAGCACAAAGGTTTCAAGGAAAGACTAAGCT...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR TCA 90 bp | GACAGGTATTCTGAAGGTAAAAATGCAGGAAGAGATGCCATGCATTACCTATGTGTCAGCTGCAAAATTTaGAATCTGTTCATCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DRYSEGKNAGRDAMHYLCVSCKI*NLFIFP Trigger: AGGGAAGATGAACAGATTTCAAATTTTGCAGCTGAC...ACATAGGTAATGCATGGCATCTCTTCCTGCATTTTTACCTTCAGAATACCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTAAACTGAGGCTTGCCTaGATATTCAAGTTTTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: CPGSQGYESAAKFEICSSKLRLA*IFKFCK Trigger: TTTACAAAACTTGAATATGCAGGCAAGCCTCAGTTT...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | GATCTGATCTTATGGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGCTCAGAAACCCAAACTGAGGCTTaGCTGCATATTCAAGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: DLILWNQLWNVLREKSSETQTEA*LHIQVL Trigger: CAAAACTTGAATATGCAGGCAAGCCTCAGTTTGGGT...TTCTGAGCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | GACAGGTATTCTGAAGGTAAAAATGCAGGAAGAGATGCCATGCATTACCTATGTACCTGTAAAGTGGATTaGTGCATTGAAAGTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DRYSEGKNAGRDAMHYLCTCKVD*CIESLS Trigger: AGAGAGACTTTCAATGCAGCAATCCACTTTACAGGT...ACATAGGTAATGCATGGCATCTCTTCCTGCATTTTTACCTTCAGAATACCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACGCTGAAGTTCAAAGATaGTGTCTCTGGATTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDAEVQR*CLWISK Trigger: CTTGGAAATCCAGAGACACCATCTTTGAACTTCAGC...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACAAGTCTTTTTGTGTTTaGGGTCAGTCCATGTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDKSFCV*GQSMLS Trigger: TGACAACATGGACTGACCCCAAACACAAAAAGACTT...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CAA 90 bp | TTGATTGACATTCCACTGAATACTCTTTGGTTTGATTACTTTACTTaGCAAATCACCTTAATAGCAGCATCTGAAGCCTTCCATAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LIDIPLNTLWFDYFT*QITLIAASEAFHSL Trigger: GAGGCTATGGAAGGCTTCAGATGCTGCTATTAAGGTGATTTGCAAAGTAAAGTAATCAAACCAAAGAGTATTCAGTGGAATGTCAATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACATTAAGGCAGAGTCTTaGCTGTGTTATGCCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDIKAES*LCYAIK Trigger: TTTAATGGCATAACACAGGCAAGACTCTGCCTTAAT...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTATTATGGAACCAACTTTaGAATGTGCTAAGAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MLCLYGSLRPKILKQSLLLWNQL*NVLREK Trigger: TTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAA...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 72 bp | GAGGGATTTGCTTGCAACACAGAAGCAACTGGCATCTaGGGAGGAGCCCCAGATGTTCGAGGTGAGTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: EGFACNTEATGI*GGAPDVRGESL Trigger: GAGGGACTCACCTCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAATCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CAA 90 bp | CACTGTATCCAGATACAGAGGCTCACAAGCCACAGACCGGCACAAACATCAACCGCTAGCCTTAGTCTCTaGTGGCTGCTTGCTTTCACC | + |
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Preference number: 3 (lower is better) Translates to: HCIQIQRLTSHRPAQTSTASLSL*WLLAFT Trigger: GGTGAAAGCAAGCAGCCACAAGAGACTAAGGCTAGC...GGTTGATGTTTGTGCCGGTCTGTGGCTTGTGAGCCTCTGTATCTGGATACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAAAGTGGATTGCTGCATaGAAAGTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FACNTEATGIWGGAPDVRKWIAA*KVSLSL Trigger: GAGAGAGAGAGAGACTTTCAATGCAGCAATCCACTT...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR GCA 72 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTaGAGAGACCTTAGAAGGACAAGACTAGAGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SLSLSLSLSLYL*RDLRRTRLEAR Trigger: TCTGGCCTCTAGTCTTGTCCTTCTAAGGTCTCTGCAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CCA 72 bp | GAACGGACTGCTTCACACCCTGCTGAAGTTCAAAGATaGTGTCTCTGGATTTCCAAGACAATCTGTGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ERTASHPAEVQR*CLWISKTICAG Trigger: TCCTGCACAGATTGTCTTGGAAATCCAGAGACACCATCTTTGAACTTCAGCAGGGTGTGAAGCAGTCCGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGACTTATGGAACCAACTTaGGAATGTGCTAAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: FACNTEATGIWGGAPDVRLMEPT*ECAKRE Trigger: TTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAG...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAACTCGACGCTTCTCTCTaGATTTCCATAACACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LPVPNPANSLSNLQPCLKLDASL*ISITPT Trigger: TGTTGGTGTTATGGAAATCAAGAGAGAAGCGTCGAG...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | CCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTaGCTTAAAACCCAGATGTACACTTTCTCGACGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PNPANSLSNLQP*LKTQMYTFSTL Trigger: AAGCGTCGAGAAAGTGTACATCTGGGTTTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | TTCTTTAAAAGGGAATACATCCTAGAGGGATTTGCTTaGAACACAGAAGCAACTGGCATCTGGGGAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FFKREYILEGFA*NTEATGIWGGA Trigger: GGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAATCCCTCTAGGATGTATTCCCTTTTAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAAAGTCAGCTGCAAAATTaGAAATCTGTTCATCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPVPNPANSLSNLQPCLKSQLQN*KSVHLP Trigger: GGGAAGATGAACAGATTTCAAATTTTGCAGCTGACT...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | AGTCAGCTGCAAAATTTGAAATCTGTTCATCTTCCCTaGTGGGTGACAGTTTGGAAGGTGCCAGGTTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQLQNLKSVHLP*WVTVWKVPGYQ Trigger: TTGGTAACCTGGCACCTTCCAAACTGTCACCCAGCAGGGAAGATGAACAGATTTCAAATTTTGCAGCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | AAGAGGCTTCTAGAAAATAATGAGTCCTTGGCAACGTaGTCTGAGACTTTCCAAGAGACAATGACCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: KRLLENNESLAT*SETFQETMTHW Trigger: CCAGTGGGTCATTGTCTCTTGGAAAGTCTCAGAGCACGTTGCCAAGGACTCATTATTTTCTAGAAGCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CCA 72 bp | GCTTCACACCCTGCTGAAGTTCAAAGATGGTGTCTCTaGATTTCCAAGACAATCTGTGCAGGAGCTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASHPAEVQRWCL*ISKTICAGALF Trigger: AAACAAAGCTCCTGCACAGATTGTCTTGGAAATCCAGAGACACCATCTTTGAACTTCAGCAGGGTGTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CCA 72 bp | TTGAAATCTGTTCATCTTCCCTGCTGGGTGACAGTTTaGAAGGTGCCAGGTTACCAACAAAGTTCAACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKSVHLPCWVTV*KVPGYQQSSTK Trigger: CTTGGTTGAACTTTGTTGGTAACCTGGCACCTTCCAAACTGTCACCCAGCAGGGAAGATGAACAGATTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | AAAGGAAACTTCCCTCTCACCTGTAAAGTGGATTGCTaGATTGAAAGTCTCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KGNFPLTCKVDC*IESLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGACTTTCAATGCAGCAATCCACTTTACAGGTGAGAGGGAAGTTTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | GAAAAAGGAAACTTCCCTCTCACCTGTAAAGTGGATTaGTGCATTGAAAGTCTCTCTCTCTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EKGNFPLTCKVD*CIESLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGACTTTCAATGCAGCAATCCACTTTACAGGTGAGAGGGAAGTTTCCTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CCA 72 bp | GTCATGAAAAAGGAAACTTCCCTCTCACCTGTAAAGTaGATTGCTGCATTGAAAGTCTCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VMKKETSLSPVK*IAALKVSLSLS Trigger: AGAGAGAGAGAGAGAGACTTTCAATGCAGCAATCCACTTTACAGGTGAGAGGGAAGTTTCCTTTTTCATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CCA 72 bp | AAAGCTGACGTTTGTTATCTGCAAGGGGAACATCATTaGGGAACCAAGGTCATCAGAGACACATCAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: KADVCYLQGEHH*GTKVIRDTSRF Trigger: AAATCTTGATGTGTCTCTGATGACCTTGGTTCCCCAATGATGTTCCCCTTGCAGATAACAAACGTCAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR GCA 72 bp | ATTAAAAACCCCATAACTTATACTACAACAGATATGTaGCATCATGTCTCTTGGAGGCCTGCAAAGCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: IKNPITYTTTDM*HHVSWRPAKHF Trigger: AAAGTGCTTTGCAGGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTTATGGGGTTTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CCA 72 bp | AGGTTACCAACAAAGTTCAACCAAGATCTGATCTTATaGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLPTKFNQDLIL*NQLWNVLREKS Trigger: GCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATCTTGGTTGAACTTTGTTGGTAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR TCA 72 bp | ACACCAACAGTTTTCAAATCCATTGACTTAGAAAGTTaGAAACAGCAGAAATTGTCAACGTTTCTTACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TPTVFKSIDLES*KQQKLSTFLTG Trigger: GCCTGTAAGAAACGTTGACAATTTCTGCTGTTTTCAACTTTCTAAGTCAATGGATTTGAAAACTGTTGGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGATCACAAAGCGGCTCCTaGACTGTTGTCGGGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FACNTEATGIWGGAPDVRSQSGS*TVVGYG Trigger: TCCATACCCGACAACAGTGCAGGAGCCGCTTTGTGA...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGACATCTTCGCCATGACTaGACCAATGATGAAGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FACNTEATGIWGGAPDVRHLRHD*TNDEGV Trigger: GACGCCTTCATCATTGGTGCAGTCATGGCGAAGATG...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAAGATTTGAGAAGCTGTaGCCGGACATGAGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FACNTEATGIWGGAPDVRRFEKL*PDMSFH Trigger: GTGGAAGCTCATGTCCGGGCACAGCTTCTCAAATCT...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAACTGGAATACCACCATaGAGACAGCAATTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FACNTEATGIWGGAPDVRTGIPP*RQQLGT Trigger: AGTGCCCAATTGCTGTCTTCATGGTGGTATTCCAGT...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAACCTCCGAAGAGACGATaGTGTAGCGGTTGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVPNPANSLSNLQPCLKPPKRR*CSGWFS Trigger: TGAGAACCAACCGCTACAGCATCGTCTCTTCGGAGG...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAACGTCTGTCACACACCTaGAACCATAGCCAATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVPNPANSLSNLQPCLKRLSHT*NHSQWL Trigger: CAACCATTGGCTATGGTTTCAGGTGTGTGACAGACG...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CAA 72 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTaGCAACCCTGCCTTAAAACCCAGATGTACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPVPNPANSLSN*QPCLKTQMYTF Trigger: GAAAGTGTACATCTGGGTTTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAGGGACACTAGAAATATaGGGTCAATTCCACTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FACNTEATGIWGGAPDVRGTLEI*GQFHYQ Trigger: TTGATAGTGGAATTGACCGCATATTTCTAGTGTCCC...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAACACTGTTGTCGGGTATaGACTTTACTCTTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPVPNPANSLSNLQPCLKHCCRV*TLLLPF Trigger: GAATGGCAAGAGTAAAGTCCATACCCGACAACAGTG...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | AAACCCCATAACTTATACTACAACAGATATGTGCCATCATGTCTCTTGGAGGCCGTGAGTCTGTGCTTGTaGTCTCTGGGACTCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPHNLYYNRYVPSCLLEAVSLCL*SLGLRS Trigger: AGAACGGAGTCCCAGAGAGCACAAGCACAGACTCAC...GGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTTATGGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACCTCGCCTTAAGGGCCTaGGCTCTAGAGGTACGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDLALRA*ALEVRL Trigger: CAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCGAG...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACCAGGAGGTGAGTCTGTaGTTGTGCTCTCTGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDQEVSL*LCSLGL Trigger: GAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTG...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTGTATCTAGATCCCCATaGAGCAGGGCTATCAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPGSQGYESAAKFEICSSVSRSP*SRAINQ Trigger: TTGGTTGATAGCCCTGCTCCATGGGGATCTAGATAC...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CAA 72 bp | GAAACTTCCCTCTCACCTGTAAAGTGGATTGCTGCATaGAAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETSLSPVKWIAA*KVSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTTCAATGCAGCAATCCACTTTACAGGTGAGAGGGAAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAATATCAAAACCAACATTaGTGTCTATCTGGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVPNPANSLSNLQPCLKYQNQH*CLSGPK Trigger: CTTTGGACCAGATAGACATCAATGTTGGTTTTGATA...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | GATCTGATCTTATGGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGCTCAGAAATCTATGCCAGGAGGTaGGTCTGTGCTTGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLILWNQLWNVLREKSSEIYARR*VCACAL Trigger: GAGAGCACAAGCACAGACTCACCTCCTGGCATAGAT...TTCTGAGCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACACGCTTGCCTGGTTGTaGAGATCTATGCCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDTLAWL*RSMPGG Trigger: ACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGT...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CAA 72 bp | GGCATATTAGGGTGTAATACCATTAGAGGCTTGATTTaGAGACGCCAACTAAAAAGGAACTCAGCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GILGCNTIRGLI*RRQLKRNSAAP Trigger: TGGGGCTGCTGAGTTCCTTTTTAGTTGGCGTCTCAAAATCAAGCCTCTAATGGTATTACACCCTAATATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTGATATACTCCCCTTCTaGAGTGATCCTAGATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPGSQGYESAAKFEICSSDILPF*SDPRFE Trigger: CTCAAATCTAGGATCACTTCAGAAGGGGAGTATATC...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTAGGCATTGAGTTGTCATaGCAGTCGCCTCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLGIELS*QSPPPC Trigger: GCATGGTGGAGGCGACTGCCATGACAACTCAATGCC...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACTGTGCTTGTGCTCTCTaGGACTCCGTTCTCACTATC | + |
|
Preference number: 4 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDCACAL*DSVLTI Trigger: GATAGTGAGAACGGAGTCCCAGAGAGCACAAGCACA...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTAGAAGCTGTTGACCTCTaGCACGCATGCTTTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLEAVDL*HACFAH Trigger: GTGAGCAAAGCATGCGTGTCAGAGGTCAACAGCTTC...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACTCTCTTCTTTGGCTTTaGCATCTTCGCCATGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDSLLWL*HLRHDC Trigger: GCAGTCATGGCGAAGATGGCAAAGCCAAAGAAGAGA...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTACATTGATGTCTATCTaGTCCAAAGGGATATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPGSQGYESAAKFEICSSTLMSI*SKGIYS Trigger: GGAGTATATCCCTTTGGACCAGATAGACATCAATGT...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| 3UTR CAA 72 bp | AACTTATACTACAACAGATATGTGCCATCATGTCTCTaGGAGGCCTGCAAAGCACTTTACATCAGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLYYNRYVPSCL*EACKALYISHP Trigger: TGGATGACTGATGTAAAGTGCTTTGCAGGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | GACAGGTATTCTGAAGGTAAAAATGCAGGAAGAGATGCCATGCATTACCTATGTTCACAGCATTGTGACTaGAGACAAGAGTCTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRYSEGKNAGRDAMHYLCSQHCD*RQESHF Trigger: GAAATGAGACTCTTGTCTTCAGTCACAATGCTGTGA...ACATAGGTAATGCATGGCATCTCTTCCTGCATTTTTACCTTCAGAATACCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | GATCTGATCTTATGGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGCTCAGAAGCAATCACAGCATTGTaGCTGAAGACAAGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLILWNQLWNVLREKSSEAITAL*LKTRVS Trigger: TGAGACTCTTGTCTTCAGTCACAATGCTGTGATTGC...TTCTGAGCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACCCTCCTCTTCCTCTTTaGTTGTTAGGGCAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDPPLPL*LLGQLH Trigger: ATGAAGTTGCCCTAACAAGCAAAGAGGAAGAGGAGG...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTACCCAGAGAATTTCATTaGCCAGATACGAACTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLPREFH*PDTNSG Trigger: GCCGGAGTTCGTATCTGGCCAATGAAATTCTCTGGG...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTAGATGCAGCCTACGATTaGCTGGAATACCACCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLDAAYD*LEYHHE Trigger: TTCATGGTGGTATTCCAGTCAATCGTAGGCTGCATC...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTACATGAAGACAGCAATTaGGCACTCGTCTGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLHEDSN*ALVCHT Trigger: TGTGTGACAGACGAGTGCCCAATTGCTGTCTTCATG...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTAGTTTGCCATCCCTCATaGCAATCACAGCATTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLVCHPS*QSQHCD Trigger: GTCACAATGCTGTGATTGCCATGAGGGATGGCAAAC...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTATCTTCATCTATTTCGTaGACGATAGTGATGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLCLYGSLRPKILKQSLLSSSIS*TIVMGD Trigger: GTCCCCCATCACTATCGTTCACGAAATAGATGAAGA...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| 3UTR CAA 72 bp | TTTAATGGCATATTAGGGTGTAATACCATTAGAGGCTaGATTTTGAGACGCCAACTAAAAAGGAACTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FNGILGCNTIRG*ILRRQLKRNSA Trigger: TGCTGAGTTCCTTTTTAGTTGGCGTCTCAAAATCAAGCCTCTAATGGTATTACACCCTAATATGCCATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 90 bp | AGGGCCTGGGCTCTAGAGGTACGCTTGCCTGGTTGTGGAGATCTATaGCAGGAGGTGAGTCTGTGCTTGTGCTCTCTGGGACTCCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RAWALEVRLPGCGDL*QEVSLCLCSLGLRS Trigger: AGAACGGAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 90 bp | TCTCGCCTTAAGGGCCTGGGCTCTAGAGGTACGCTTGCCTGGTTGTaGAGATCTATGCCAGGAGGTGAGTCTGTGCTTGTGCTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLKGLGSRGTLAWL*RSMPGGESVLVLSG Trigger: CCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 90 bp | TCCGATTCTCGCCTTAAGGGCCTGGGCTCTAGAGGTACGCTTGCCTaGTTGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSRLKGLGSRGTLA*LWRSMPGGESVLVL Trigger: GAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCGAGAATCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | TTTGCTTGCAACACAGAAGCAACTGGCATCTGGGGAGGAGCCCCAGATGTTCGAGCAGCCGTGAAGCTGTaGACCTCTGACACGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: FACNTEATGIWGGAPDVRAAVKL*TSDTHA Trigger: AGCATGCGTGTCAGAGGTCAACAGCTTCACGGCTGC...TCGAACATCTGGGGCTCCTCCCCAGATGCCAGTTGCTTCTGTGTTGCAAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 90 bp | GTACGCTTGCCTGGTTGTGGAGATCTATGCCAGGAGGTGAGTCTGTaGTTGTGCTCTCTGGGACTCCGTTCTCACTATCCTCCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRLPGCGDLCQEVSL*LCSLGLRSHYPPLP Trigger: AGGAAGAGGAGGATAGTGAGAACGGAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 90 bp | TTGCCTGGTTGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTTGTaGTCTCTGGGACTCCGTTCTCACTATCCTCCTCTTCCTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGCGDLCQEVSLCL*SLGLRSHYPPLPLC Trigger: GCAAAGAGGAAGAGGAGGATAGTGAGAACGGAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 90 bp | TCCCCTTCTGAAGTGATCCTAGATTTGAGAAGCTGTGCCCGGACATaGGCTTCCACAAGGTGGCTCTTTCGAAGGTTACCCACTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPSEVILDLRSCART*ASTRWLFRRLPTLH Trigger: GTGGAGAGTGGGTAACCTTCGAAAGAGCCACCTTGTGGAAGCTCATGTCCGGGCACAGCTTCTCAAATCTAGGATCACTTCAGAAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 90 bp | TCTGACACGCATGCTTTGCTCACTTTAGAAGTATCTAGATCCCCATaGAGCAGGGCTATCAACCAAAACACACAGCCAAAGAACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDTHALLTLEVSRSP*SRAINQNTQPKNSQ Trigger: CTGGCTGTTCTTTGGCTGTGTGTTTTGGTTGATAGCCCTGCTCCATGGGGATCTAGATACTTCTAAAGTGAGCAAAGCATGCGTGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 90 bp | ACCAACATTGATGTCTATCTGGTCCAAAGGGATATACTCCCCTTCTaGAGTGATCCTAGATTTGAGAAGCTGTGCCCGGACATGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNIDVYLVQRDILPF*SDPRFEKLCPDMSF Trigger: GAAGCTCATGTCCGGGCACAGCTTCTCAAATCTAGGATCACTTCAGAAGGGGAGTATATCCCTTTGGACCAGATAGACATCAATGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | GACAGGTATTCTGAAGGTAAAAATGCAGGAAGAGATGCCATGCATTACCTATGTCCATTCCCAAAGCCATaGGCAACTGCCATAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRYSEGKNAGRDAMHYLCPFPKP*ATAIVA Trigger: GGCCACTATGGCAGTTGCCAATGGCTTTGGGAATGG...ACATAGGTAATGCATGGCATCTCTTCCTGCATTTTTACCTTCAGAATACCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | AAACCCCATAACTTATACTACAACAGATATGTGCCATCATGTCTCTTGGAGGCCCCCCAGAGAATTTCATaGGCCAGATACGAACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KPHNLYYNRYVPSCLLEAPQRIS*ARYELR Trigger: CCGGAGTTCGTATCTGGCCAATGAAATTCTCTGGGG...GGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTTATGGGGTTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | CTCCCTGTCCCCAACCCAGCAAACTCTTTAAGCAACTTGCAACCCTGCCTTAAACCTCTTCCTCTTTGCTaGTTAGGGCAACTTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPVPNPANSLSNLQPCLKPLPLC*LGQLHF Trigger: AAAATGAAGTTGCCCTAACAAGCAAAGAGGAAGAGG...TTTAAGGCAGGGTTGCAAGTTGCTTAAAGAGTTTGCTGGGTTGGGGACAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | GATCTGATCTTATGGAACCAACTTTGGAATGTGCTAAGAGAGAAAAGCTCAGAAGCGGCTCCTGCACTGTaGTCGGGTATGGACTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: DLILWNQLWNVLREKSSEAAPAL*SGMDFT Trigger: AGTAAAGTCCATACCCGACAACAGTGCAGGAGCCGC...TTCTGAGCTTTTCTCTCTTAGCACATTCCAAAGTTGGTTCCATAAGATCAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACAACTCCGGCATTGAGTaGTCATGGCAGTCGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDNSGIE*SWQSPP Trigger: TGGAGGCGACTGCCATGACAACTCAATGCCGGAGTT...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 90 bp | AGCATTGTGACTGAAGACAAGAGTCTCATTTCTCTTCTTTGGCTTTaGCATCTTCGCCATGACTGCACCAATGATGAAGGCGTCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SIVTEDKSLISLLWL*HLRHDCTNDEGVND Trigger: ATCATTGACGCCTTCATCATTGGTGCAGTCATGGCGAAGATGGCAAAGCCAAAGAAGAGAAATGAGACTCTTGTCTTCAGTCACAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTGTATGGACTTTACTCTaGCCATTCCCAAAGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CPGSQGYESAAKFEICSSVWTLL*PFPKPL Trigger: CAATGGCTTTGGGAATGGCAAGAGTAAAGTCCATAC...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | AAACCCCATAACTTATACTACAACAGATATGTGCCATCATGTCTCTTGGAGGCCTCCTCCTCTTCCTCTTaGCTTGTTAGGGCAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KPHNLYYNRYVPSCLLEASSSSS*LVRATS Trigger: TGAAGTTGCCCTAACAAGCAAAGAGGAAGAGGAGGA...GGCCTCCAAGAGACATGATGGCACATATCTGTTGTAGTATAAGTTATGGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACGCTCTAGAGGTACGCTaGCCTGGTTGTGGAGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDALEVR*PGCGDL Trigger: TAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGC...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | TGCCCTGGCAGTCAAGGCTATGAGTCAGCTGCAAAATTTGAAATCTGTTCATCTTCTGACACGCATGCTTaGCTCACTTTAGAAGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CPGSQGYESAAKFEICSSSDTHA*LTLEVS Trigger: AGATACTTCTAAAGTGAGCAAAGCATGCGTGTCAGA...AGATGAACAGATTTCAAATTTTGCAGCTGACTCATAGCCTTGACTGCCAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | CAGAGTCAAACAAACTTCTCTAGGGATTTAGAAATGACTACAGTGCTCTATGACCACATCAAGCAGAGTTaGCCATCCCTCATGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QSQTNFSRDLEMTTVLYDHIKQS*PSLMAI Trigger: GATTGCCATGAGGGATGGCAAACTCTGCTTGATGTG...GTCATAGAGCACTGTAGTCATTTCTAAATCCCTAGAGAAGTTTGTTTGACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 90 bp | AATATGCGGTCAATTCCACTATCAAAACCAACATTGATGTCTATCTaGTCCAAAGGGATATACTCCCCTTCTGAAGTGATCCTAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NMRSIPLSKPTLMSI*SKGIYSPSEVILDL Trigger: CAAATCTAGGATCACTTCAGAAGGGGAGTATATCCCTTTGGACCAGATAGACATCAATGTTGGTTTTGATAGTGGAATTGACCGCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS-3UTR CAA 90 bp | ATGTTGTGTTTATATGGCTCACTAAGACCTAAAATACTGAAACAGTCCCTCTTACTATCAAAACCAACATaGATGTCTATCTGGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MLCLYGSLRPKILKQSLLLSKPT*MSIWSK Trigger: TTTGGACCAGATAGACATCAATGTTGGTTTTGATAG...TAAGAGGGACTGTTTCAGTATTTTAGGTCTTAGTGAGCCATATAAACACAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 72 bp | CGCCTTAAGGGCCTGGGCTCTAGAGGTACGCTTGCCTaGTTGTGGAGATCTATGCCAGGAGGTGAGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLKGLGSRGTLA*LWRSMPGGESV Trigger: CACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 72 bp | AAGGGCCTGGGCTCTAGAGGTACGCTTGCCTGGTTGTaGAGATCTATGCCAGGAGGTGAGTCTGTGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: KGLGSRGTLAWL*RSMPGGESVLV Trigger: CACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 90 bp | GATTCTCGCCTTAAGGGCCTGGGCTCTAGAGGTACGCTTGCCTGGTaGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTTGTGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSRLKGLGSRGTLAW*WRSMPGGESVLVLS Trigger: AGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCGAGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 72 bp | TACGCTTGCCTGGTTGTGGAGATCTATGCCAGGAGGTaGGTCTGTGCTTGTGCTCTCTGGGACTCCGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: YACLVVEIYARR*VCACALWDSVL Trigger: GAGAACGGAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 72 bp | GCTCTAGAGGTACGCTTGCCTGGTTGTGGAGATCTATaGCAGGAGGTGAGTCTGTGCTTGTGCTCTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALEVRLPGCGDL*QEVSLCLCSLG Trigger: TCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 72 bp | CTTAAGGGCCTGGGCTCTAGAGGTACGCTTGCCTGGTaGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LKGLGSRGTLAW*WRSMPGGESVL Trigger: AAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 72 bp | ATTCTCGCCTTAAGGGCCTGGGCTCTAGAGGTACGCTaGCCTGGTTGTGGAGATCTATGCCAGGAGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ILALRAWALEVR*PGCGDLCQEVS Trigger: ACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 90 bp | CGCTTGCCTGGTTGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTaGTGCTCTCTGGGACTCCGTTCTCACTATCCTCCTCTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLPGCGDLCQEVSLC*CSLGLRSHYPPLPL Trigger: AAGAGGAAGAGGAGGATAGTGAGAACGGAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 90 bp | ATATCTCCGATTCTCGCCTTAAGGGCCTGGGCTCTAGAGGTACGCTaGCCTGGTTGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISPILALRAWALEVR*PGCGDLCQEVSLCL Trigger: CAAGCACAGACTCACCTCCTGGCATAGATCTCCACAACCAGGCAAGCGTACCTCTAGAGCCCAGGCCCTTAAGGCGAGAATCGGAGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 72 bp | TGTGGAGATCTATGCCAGGAGGTGAGTCTGTGCTTGTaGTCTCTGGGACTCCGTTCTCACTATCCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGDLCQEVSLCL*SLGLRSHYPPL Trigger: AAGAGGAGGATAGTGAGAACGGAGTCCCAGAGAGCACAAGCACAGACTCACCTCCTGGCATAGATCTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 72 bp | CGGCTCCTGCACTGTTGTCGGGTATGGACTTTACTCTaGCCATTCCCAAAGCCATTGGCAACTGCCATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLHCCRVWTLL*PFPKPLATAIV Trigger: CACTATGGCAGTTGCCAATGGCTTTGGGAATGGCAAGAGTAAAGTCCATACCCGACAACAGTGCAGGAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 90 bp | TTCACAAAGCGGCTCCTGCACTGTTGTCGGGTATGGACTTTACTCTaGCCATTCCCAAAGCCATTGGCAACTGCCATAGTGGCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTKRLLHCCRVWTLL*PFPKPLATAIVASF Trigger: GAAGCTGGCCACTATGGCAGTTGCCAATGGCTTTGGGAATGGCAAGAGTAAAGTCCATACCCGACAACAGTGCAGGAGCCGCTTTGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 90 bp | CACTGTTGTCGGGTATGGACTTTACTCTTGCCATTCCCAAAGCCATaGGCAACTGCCATAGTGGCCAGCTTCATGCCATCTTCCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: HCCRVWTLLLPFPKP*ATAIVASFMPSSSE Trigger: TTCGGAGGAAGATGGCATGAAGCTGGCCACTATGGCAGTTGCCAATGGCTTTGGGAATGGCAAGAGTAAAGTCCATACCCGACAACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 90 bp | AAGAGGAAGGCAGCCGTGAAGCTGTTGACCTCTGACACGCATGCTTaGCTCACTTTAGAAGTATCTAGATCCCCATGGAGCAGGGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: KRKAAVKLLTSDTHA*LTLEVSRSPWSRAI Trigger: GATAGCCCTGCTCCATGGGGATCTAGATACTTCTAAAGTGAGCAAAGCATGCGTGTCAGAGGTCAACAGCTTCACGGCTGCCTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 72 bp | GAAGTGATCCTAGATTTGAGAAGCTGTGCCCGGACATaGGCTTCCACAAGGTGGCTCTTTCGAAGGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: EVILDLRSCART*ASTRWLFRRLP Trigger: GGGTAACCTTCGAAAGAGCCACCTTGTGGAAGCTCATGTCCGGGCACAGCTTCTCAAATCTAGGATCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 72 bp | CGGGTATGGACTTTACTCTTGCCATTCCCAAAGCCATaGGCAACTGCCATAGTGGCCAGCTTCATGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RVWTLLLPFPKP*ATAIVASFMPS Trigger: AGATGGCATGAAGCTGGCCACTATGGCAGTTGCCAATGGCTTTGGGAATGGCAAGAGTAAAGTCCATACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 72 bp | GATGTCTATCTGGTCCAAAGGGATATACTCCCCTTCTaGAGTGATCCTAGATTTGAGAAGCTGTGCCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: DVYLVQRDILPF*SDPRFEKLCPD Trigger: GTCCGGGCACAGCTTCTCAAATCTAGGATCACTTCAGAAGGGGAGTATATCCCTTTGGACCAGATAGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS GCA 72 bp | CATTGCAATGACCATCTTTCTTCACAAAGCGGCTCCTaGACTGTTGTCGGGTATGGACTTTACTCTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HCNDHLSSQSGS*TVVGYGLYSCH Trigger: ATGGCAAGAGTAAAGTCCATACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAAAGATGGTCATTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 72 bp | ATGACCATCTTTCTTCACAAAGCGGCTCCTGCACTGTaGTCGGGTATGGACTTTACTCTTGCCATTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: MTIFLHKAAPAL*SGMDFTLAIPK Trigger: TTTGGGAATGGCAAGAGTAAAGTCCATACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAAAGATGGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CCA 72 bp | CATGCTTTGCTCACTTTAGAAGTATCTAGATCCCCATaGAGCAGGGCTATCAACCAAAACACACAGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HALLTLEVSRSP*SRAINQNTQPK Trigger: CTTTGGCTGTGTGTTTTGGTTGATAGCCCTGCTCCATGGGGATCTAGATACTTCTAAAGTGAGCAAAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 72 bp | GTTTGCCATCCCTCATGGCAATCACAGCATTGTGACTaGAGACAAGAGTCTCATTTCTCTTCTTTGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCHPSWQSQHCD*RQESHFSSLAL Trigger: CAAAGCCAAAGAAGAGAAATGAGACTCTTGTCTTCAGTCACAATGCTGTGATTGCCATGAGGGATGGCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 72 bp | GAAATATGCGGTCAATTCCACTATCAAAACCAACATTaGTGTCTATCTGGTCCAAAGGGATATACTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EICGQFHYQNQH*CLSGPKGYTPL Trigger: AAGGGGAGTATATCCCTTTGGACCAGATAGACATCAATGTTGGTTTTGATAGTGGAATTGACCGCATATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS CAA 72 bp | AGAAATATGCGGTCAATTCCACTATCAAAACCAACATaGATGTCTATCTGGTCCAAAGGGATATACTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RNMRSIPLSKPT*MSIWSKGIYSP Trigger: AGGGGAGTATATCCCTTTGGACCAGATAGACATCAATGTTGGTTTTGATAGTGGAATTGACCGCATATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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| CDS TCA 72 bp | GGGGGTGTTAGGTACTTCATAAGTCTTATGGAATCTTaGATAGTCTACTTTATAGTAGTGTTTCTCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GGVRYFISLMES*IVYFIVVFLFK Trigger: TTTGAAGAGAAACACTACTATAAAGTAGACTATTCAAGATTCCATAAGACTTATGAAGTACCTAACACCCCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042970.3 |
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