RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062609

Ensembl transcript IDs: ENSMUST00000037154.14, ENSMUST00000113854.8, ENSMUST00000113855.8, ENSMUST00000113856.8, ENSMUST00000113858.3, ENSMUST00000113859.8, ENSMUST00000113861.8, ENSMUST00000113862.8, ENSMUST00000134166.8, ENSMUST00000140222.8

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTATTCTTCTGAGACAGGGTGTCTTACTGAGCCTGGAGCTCTCTaGTGCCCAGTAAGTCCCAGTGATCCCCCTGTCTCAGCTCCCCAT +
Preference number: 1 (lower is better)
Translates to: PYSSETGCLTEPGAL*CPVSPSDPPVSAPH
Trigger: ATGGGGAGCTGAGACAGGGGGATCACTGGGACTTACTGGGCACCAGAGAGCTCCAGGCTCAGTAAGACACCCTGTCTCAGAAGAATAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 90 bp TATTCTTCTGAGACAGGGTGTCTTACTGAGCCTGGAGCTCTCTGGTaGCCAGTAAGTCCCAGTGATCCCCCTGTCTCAGCTCCCCATGAT +
Preference number: 1 (lower is better)
Translates to: YSSETGCLTEPGALW*PVSPSDPPVSAPHD
Trigger: ATCATGGGGAGCTGAGACAGGGGGATCACTGGGACTTACTGGGCACCAGAGAGCTCCAGGCTCAGTAAGACACCCTGTCTCAGAAGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 90 bp CAAAGTGGCTCACTGTATGGGTCAGAGGTGCGTCTCTCCTTTGTCTaGGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTGGTATACA +
Preference number: 1 (lower is better)
Translates to: QSGSLYGSEVRLSFV*GHRQQGRRHGLWYT
Trigger: TGTATACCACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCACCTCTGACCCATACAGTGAGCCACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CCA 90 bp TCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTaGTATACATTGATCTGCTGCCCTGTGGTCTCCCAAATGAAGAAC +
Preference number: 1 (lower is better)
Translates to: SFVCGHRQQGRRHGL*YTLICCPVVSQMKN
Trigger: GTTCTTCATTTGGGAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTaGAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCGGCTGTGC +
Preference number: 1 (lower is better)
Translates to: QRGSRQMTLQTLLRA*NIEVSGSLAETRLC
Trigger: GCACAGCCGGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 90 bp ATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTaGCTTATTCTTCTGAGACAGGGTGTCTTACTGAGCCTGGAGCTC +
Preference number: 1 (lower is better)
Translates to: MHVPRGQRSRSLSFI*LILLRQGVLLSLEL
Trigger: GAGCTCCAGGCTCAGTAAGACACCCTGTCTCAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 90 bp AGACAGACAGACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTaGCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTA +
Preference number: 1 (lower is better)
Translates to: RQTDRLVCGVGRACM*LEARGVGHFPLSAL
Trigger: TAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTCTGTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 90 bp AGACAGAGACAGACAGACAGATTGGTATGTGGAGTGGGGAGAGCATaGATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCT +
Preference number: 1 (lower is better)
Translates to: RQRQTDRLVCGVGRA*MCLEARGVGHFPLS
Trigger: AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTCTGTCTGTCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 90 bp CTGGTATTGTGTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATaGGGAACATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: LVLCLQSQSTPWHIV*GTCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAACACAATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 90 bp AGTTGTACTACGTATTTGTCTAGGCTCTTGCACAAGGGCTCTTCTTaGTCACAGACACCTTTCCCCCTTGGCTCCTCTTCTCTGTGTCAT +
Preference number: 1 (lower is better)
Translates to: SCTTYLSRLLHKGSS*SQTPFPLGSSSLCH
Trigger: ATGACACAGAGAAGAGGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAATACGTAGTACAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 90 bp GAGGATAACTTGGTAGACTTTCTTAGTGTGACCTCTGATCCCACATaGCTGGTATTGTGTTTGCAGAGCCAGAGCACACCCTGGCATATT +
Preference number: 1 (lower is better)
Translates to: EDNLVDFLSVTSDPT*LVLCLQSQSTPWHI
Trigger: AATATGCCAGGGTGTGCTCTGGCTCTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTACCAAGTTATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 90 bp CACAGGCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTaGTGCCCTGTGGTCTCCCAAATGAAGAACAATTTCAGAATCATA +
Preference number: 1 (lower is better)
Translates to: HRQQGRRHGLWYTLI*CPVVSQMKNNFRII
Trigger: TATGATTCTGAAATTGTTCTTCATTTGGGAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 90 bp CAGGCTGCCATGAAGTCAGGAAGGAGTGGAAAACATTTTCTTGAATaGTTTAACCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGAGAGA +
Preference number: 1 (lower is better)
Translates to: QAAMKSGRSGKHFLE*FNLSLCVCVCVCER
Trigger: TCTCTCACACACACACACACACACACACAGAGAGAGGTTAAATCATTCAAGAAAATGTTTTCCACTCCTTCCTGACTTCATGGCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 90 bp GAGACTGGCGTGTTACCATTTGTACCGTATACAACAGAAGCAAGCTaGGTTACTGGGATTAATCAGATTCAGATGGCCACCAAAGTGGAT +
Preference number: 1 (lower is better)
Translates to: ETGVLPFVPYTTEAS*VTGINQIQMATKVD
Trigger: ATCCACTTTGGTGGCCATCTGAATCTGATTAATCCCAGTAACTCAGCTTGCTTCTGTTGTATACGGTACAAATGGTAACACGCCAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 90 bp GATAAAATGAGCACACAGCGCTTATCTATTCAGTCAATCCTAGCCTaGTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCCTAT +
Preference number: 1 (lower is better)
Translates to: DKMSTQRLSIQSILA*LILFPKEMQALYSY
Trigger: ATAGGAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGATAAGCGCTGTGTGCTCATTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR TCA 90 bp CTTGGTTCCAACCCAAAGATTTTATTTCCACATTTTGTTGTTGTTTaGAGGAAAGACAGTGTGAAAGTGGTCTCTCAAGGTTATGACTGG +
Preference number: 1 (lower is better)
Translates to: LGSNPKILFPHFVVV*RKDSVKVVSQGYDW
Trigger: CCAGTCATAACCTTGAGAGACCACTTTCACACTGTCTTTCCTTCAAACAACAACAAAATGTGGAAATAAAATCTTTGGGTTGGAACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCCAGAGCCTGCAACATTaGGGTTTCTGGAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: RLITLTEGRPGGHMDSERQSLQH*GFWKPG
Trigger: GCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTG...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCCAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTC +
Preference number: 2 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSQHCWV*PPAGIL
Trigger: GAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTG...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATaGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCAGAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: CDLVVGPPIPRSWQP*LLKGALVRRRPEAG
Trigger: ACCGGCCTCTGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCCAGAGCCTGCAACATTaGGGTTTCTGGAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSQSLQH*GFWKPG
Trigger: GCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTG...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CTAGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTAGGTTTCTGGAAGCCTaGCTGAAACCCGGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: LGSCTRALLAHRHLSPLARFLEA*LKPGCA
Trigger: CGCACAGCCGGGTTTCAGCCAGGCTTCCAGAAACCT...AGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCTTGAGTGCTCACCTCTaGCCAGGCACTCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSLSAHL*PGTLKT
Trigger: TGTCTTCAGAGTGCCTGGTCAGAGGTGAGCACTCAA...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCCACTGTCAGCACTGCTaGGTCTGCCCTCCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: GSSSLCHELQTAASNADFHCQHC*VCPPAG
Trigger: TCCCGCTGGAGGGCAGACCCAGCAGTGCTGACAGTG...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGACACAAGGGCTCTTCTTaGTCACAGACACCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: DRLVCGVGRACMCLEARGHKGSS*SQTPFP
Trigger: GGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTG...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGCACTGTCAGCACTGCTaGGTCTGCCCTCCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLHCQHC*VCPPAG
Trigger: TCCCGCTGGAGGGCAGACCCAGCAGTGCTGACAGTG...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCCACTGTCAGCACTGCTaGGTCTGCCCTCCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPHCQHC*VCPPAG
Trigger: TCCCGCTGGAGGGCAGACCCAGCAGTGCTGACAGTG...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCAGGTTTCTGGAAGCCTaGCTGAAACCCGGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLRFLEA*LKPGCA
Trigger: CGCACAGCCGGGTTTCAGCCAGGCTTCCAGAAACCT...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGCAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTC +
Preference number: 2 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLQHCWV*PPAGIL
Trigger: GAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTG...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCCTGGAGCTCTCTGGTaGCCAGTAAGTCCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGPGALW*PVSPSD
Trigger: ATCACTGGGACTTACTGGGCACCAGAGAGCTCCAGG...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCGGGAGAGCATGCATGTaGCTAGAGGCCAGAGGAGTA +
Preference number: 2 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLGRACM*LEARGV
Trigger: TACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CAA 90 bp AGAGACAGAAAGAGACAGGGAGAGAGACAGAGACAGACAGACAGATaGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RDRKRQGERQRQTDR*VCGVGRACMCLEAR
Trigger: TCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTCTGTCTGTCTCTGTCTCTCTCCCTGTCTCTTTCTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CTAGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTGAATTAACACAATGGTaGCAGTCACAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LGSCTRALLAHRHLSPLAELTQW*QSQLSG
Trigger: CCCTGAGAGCTGTGACTGTCACCATTGTGTTAATTC...AGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCAAATCTGAATTTGAGTaGTCACCTCTGACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSKSEFE*SPLTRH
Trigger: GTGCCTGGTCAGAGGTGAGCACTCAAATTCAGATTT...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTACCTCTGATCCCACATaGCTGGTATTGTGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACTSDPT*LVLCLQ
Trigger: CTGCAAACACAATACCAGGCATGTGGGATCAGAGGT...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCACTGTCAGCACTGCTaGGTCTGCCCTCCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSHCQHC*VCPPAG
Trigger: TCCCGCTGGAGGGCAGACCCAGCAGTGCTGACAGTG...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGATCTCAAGGTTATGACTaGGGGTGCAGTTGTTCACAC +
Preference number: 2 (lower is better)
Translates to: DRLVCGVGRACMCLEARGSQGYD*GCSCSH
Trigger: GTGTGAACAACTGCACCCCCAGTCATAACCTTGAGA...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGACAAACTTTTCCTCCATaGGTCTCAGACTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: DRLVCGVGRACMCLEARGQTFPP*VSDSHC
Trigger: GCAGTGAGAGTCTGAGACCCATGGAGGAAAAGTTTG...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTCAAACTTTTCCTCCATaGGTCTCAGACTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACQTFPP*VSDSHC
Trigger: GCAGTGAGAGTCTGAGACCCATGGAGGAAAAGTTTG...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCAGAGCCTGCAACATTaGGGTTTCTGGAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLQSLQH*GFWKPG
Trigger: GCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTCTCTTCTCTGTGTCATaGGCTGCAAACTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: GRACMCLEARGVGHFPLSLFSVS*AANCSI
Trigger: GATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAG...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCCTCTTCTCTGTGTCATaGGCTGCAAACTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLLFSVS*AANCSI
Trigger: GATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAG...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CTAGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTAAATCTGAATTTGAGTaGTCACCTCTGACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: LGSCTRALLAHRHLSPLAKSEFE*SPLTRH
Trigger: GTGCCTGGTCAGAGGTGAGCACTCAAATTCAGATTT...AGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTCACTGTCAGCACTGCTaGGTCTGCCCTCCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIAHCQHC*VCPPAG
Trigger: TCCCGCTGGAGGGCAGACCCAGCAGTGCTGACAGTG...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTGAGATAGCTGAGAGATaGATGTGTCGACTGATAACG +
Preference number: 2 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACEIAER*MCRLIT
Trigger: CGTTATCAGTCGACACATCCATCTCTCAGCTATCTC...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCCTGATCCCACATGCCTaGTATTGTGTTTGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLLIPHA*YCVCRA
Trigger: GGCTCTGCAAACACAATACCAGGCATGTGGGATCAG...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGTTGAGTGCTCACCTCTaGCCAGGCACTCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLLSAHL*PGTLKT
Trigger: TGTCTTCAGAGTGCCTGGTCAGAGGTGAGCACTCAA...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTGAATTAACACAATGGTaGCAGTCACAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGELTQW*QSQLSG
Trigger: CCCTGAGAGCTGTGACTGTCACCATTGTGTTAATTC...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTCCCTGGCATATTGTATaGGGAACATGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GRACMCLEARGVGHFPLSPWHIV*GTCVCV
Trigger: CACACACACACATGTTCCTCATACAATATGCCAGGG...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTCAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTC +
Preference number: 2 (lower is better)
Translates to: QRGSRQMTLQTLLRACNIQHCWV*PPAGIL
Trigger: GAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTG...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGACAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTC +
Preference number: 2 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGQHCWV*PPAGIL
Trigger: GAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTG...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTCAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTC +
Preference number: 2 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIAQHCWV*PPAGIL
Trigger: GAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTG...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CGTGTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATCAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTC +
Preference number: 2 (lower is better)
Translates to: RVANMSLNGAIWFVCEGHQHCWV*PPAGIL
Trigger: GAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTG...ATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CTAGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTACATTACTCAGAGCCTaGAACATTGAGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: LGSCTRALLAHRHLSPLATLLRA*NIEVSG
Trigger: TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGT...AGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCACAAGGGCTCTTCTTaGTCACAGACACCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLHKGSS*SQTPFP
Trigger: GGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTACCTCTGATCCCACATaGCTGGTATTGTGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: GRACMCLEARGVGHFPLSTSDPT*LVLCLQ
Trigger: CTGCAAACACAATACCAGGCATGTGGGATCAGAGGT...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCAGGTTTCTGGAAGCCTaGCTGAAACCCGGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSRFLEA*LKPGCA
Trigger: CGCACAGCCGGGTTTCAGCCAGGCTTCCAGAAACCT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGGACACCTTTCCCCCTTaGCTCCTCTTCTCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLDTFPP*LLFSVS
Trigger: TGACACAGAGAAGAGGAGCCAAGGGGGAAAGGTGTC...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CAA 90 bp TGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTGGTATACATaGATCTGCTGCCCTGTGGTCTCCCAAATGAAGAACAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: CGHRQQGRRHGLWYT*ICCPVVSQMKNNFR
Trigger: TCTGAAATTGTTCTTCATTTGGGAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTTGAGTAGGCATACATaGCATCCACTGTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VCRARAHPGILYEEHVCVLSRHT*HPLSAL
Trigger: CAGTGCTGACAGTGGATGGCATGTATGCCTACTCAA...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTATTTGTCTAGGCTCTTaGACAAGGGCTCTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: GRACMCLEARGVGHFPLSICLGS*TRALLA
Trigger: AGCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAAT...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCCAATATGTCCCTAAATaGTGCTATTTGGTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSQYVPK*CYLVCL
Trigger: CAGACAAACCAAATAGCACCATTTAGGGACATATTG...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTTCTCCCCAGTTTCTCTaGGTCCAAATGTTCATTTTT +
Preference number: 2 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACSPQFL*VQMFIF
Trigger: AAAAATGAACATTTGGACCCAGAGAAACTGGGGAGA...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCTTGAGTGCTCACCTCTaGCCAGGCACTCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSLSAHL*PGTLKT
Trigger: TGTCTTCAGAGTGCCTGGTCAGAGGTGAGCACTCAA...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCGAACATGAGAAGGAGTaGGTTCTTAAGCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLEHEKE*VLKQCY
Trigger: ATAGCACTGCTTAAGAACTCACTCCTTCTCATGTTC...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGCTCTTCTCTGTGTCATaGGCTGCAAACTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQLFSVS*AANCSI
Trigger: GATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAG...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCCACAAGGGCTCTTCTTaGTCACAGACACCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILHKGSS*SQTPFP
Trigger: GGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTG...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTCACAGAATCAAGAGATaGACATATTTTCTGAACTCT +
Preference number: 2 (lower is better)
Translates to: GVGRACMCLEARGVGHFPHRIKR*TYFLNS
Trigger: AGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTG...AGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTCTCAAGGTTATGACTaGGGGTGCAGTTGTTCACAC +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLSQGYD*GCSCSH
Trigger: GTGTGAACAACTGCACCCCCAGTCATAACCTTGAGA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTTTGAGTGCTCACCTCTaGCCAGGCACTCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIALSAHL*PGTLKT
Trigger: TGTCTTCAGAGTGCCTGGTCAGAGGTGAGCACTCAA...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTTTGAGTGCTCACCTCTaGCCAGGCACTCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: QRGSRQMTLQTLLRACNILSAHL*PGTLKT
Trigger: TGTCTTCAGAGTGCCTGGTCAGAGGTGAGCACTCAA...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGGAACATGAGAAGGAGTaGGTTCTTAAGCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: VCRARAHPGILYEEHVCVEHEKE*VLKQCY
Trigger: ATAGCACTGCTTAAGAACTCACTCCTTCTCATGTTC...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGGAATTAACACAATGGTaGCAGTCACAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQELTQW*QSQLSG
Trigger: CCCTGAGAGCTGTGACTGTCACCATTGTGTTAATTC...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACTTGAGTAGGCATACATaGCATCCACTGTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VLKQCYEQIANYASDLSHLSRHT*HPLSAL
Trigger: CAGTGCTGACAGTGGATGGCATGTATGCCTACTCAA...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGGAACATGAGAAGGAGTaGGTTCTTAAGCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLEHEKE*VLKQCY
Trigger: ATAGCACTGCTTAAGAACTCACTCCTTCTCATGTTC...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCGAACATGAGAAGGAGTaGGTTCTTAAGCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPEHEKE*VLKQCY
Trigger: ATAGCACTGCTTAAGAACTCACTCCTTCTCATGTTC...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCGAATTAACACAATGGTaGCAGTCACAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILELTQW*QSQLSG
Trigger: CCCTGAGAGCTGTGACTGTCACCATTGTGTTAATTC...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCAGACTTCCTATTTGTaGCACAGTTTCAGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGQTSYL*HSFSFL
Trigger: AAGAAAACTGAAACTGTGTCACAAATAGGAAGTCTG...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTTGAGTAGGCATACATaGCATCCACTGTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSLSRHT*HPLSAL
Trigger: CAGTGCTGACAGTGGATGGCATGTATGCCTACTCAA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCAGTCAATCCTAGCCTaGTTAATTCTCTTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLQSILA*LILFPK
Trigger: CTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCGACACCTTTCCCCCTTaGCTCCTCTTCTCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPDTFPP*LLFSVS
Trigger: TGACACAGAGAAGAGGAGCCAAGGGGGAAAGGTGTC...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGGAACATGAGAAGGAGTaGGTTCTTAAGCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQEHEKE*VLKQCY
Trigger: ATAGCACTGCTTAAGAACTCACTCCTTCTCATGTTC...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCTCTTCTCTGTGTCATaGGCTGCAAACTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPLFSVS*AANCSI
Trigger: GATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTTTGTCCAGATAAAATaGGCACACAGCGCTTATCTA +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLFVQIK*AHSAYL
Trigger: TAGATAAGCGCTGTGTGCTCATTTTATCTGGACAAA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCAAATCTGAATTTGAGTaGTCACCTCTGACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILKSEFE*SPLTRH
Trigger: GTGCCTGGTCAGAGGTGAGCACTCAAATTCAGATTT...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp TCTATTCAGTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGATTTGTCTAGGCTCTTaGACAAGGGCTCTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SIQSILACLILFPKEMQAICLGS*TRALLA
Trigger: AGCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAAT...CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTCACAGAATCAAGAGATaGACATATTTTCTGAACTCT +
Preference number: 2 (lower is better)
Translates to: GRACMCLEARGVGHFPLSHRIKR*TYFLNS
Trigger: AGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTG...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGCAATATGTCCCTAAATaGTGCTATTTGGTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: VCRARAHPGILYEEHVCVQYVPK*CYLVCL
Trigger: CAGACAAACCAAATAGCACCATTTAGGGACATATTG...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCGAGATAGCTGAGAGATaGATGTGTCGACTGATAACG +
Preference number: 2 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILEIAER*MCRLIT
Trigger: CGTTATCAGTCGACACATCCATCTCTCAGCTATCTC...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCGAACATGAGAAGGAGTaGGTTCTTAAGCAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSEHEKE*VLKQCY
Trigger: ATAGCACTGCTTAAGAACTCACTCCTTCTCATGTTC...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCAGACTTCCTATTTGTaGCACAGTTTCAGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VPRGQRSRSLSFICLILLQTSYL*HSFSFL
Trigger: AAGAAAACTGAAACTGTGTCACAAATAGGAAGTCTG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR TCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGTTTGTCCAGATAAAATaGGCACACAGCGCTTATCTA +
Preference number: 2 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQFVQIK*AHSAYL
Trigger: TAGATAAGCGCTGTGTGCTCATTTTATCTGGACAAA...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTAAATCTGAATTTGAGTaGTCACCTCTGACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIAKSEFE*SPLTRH
Trigger: GTGCCTGGTCAGAGGTGAGCACTCAAATTCAGATTT...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCACATTACTCAGAGCCTaGAACATTGAGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSTLLRA*NIEVSG
Trigger: TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCACATTACTCAGAGCCTaGAACATTGAGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILTLLRA*NIEVSG
Trigger: TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGT...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTTTGAGTAGGCATACATaGCATCCACTGTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFLSRHT*HPLSAL
Trigger: CAGTGCTGACAGTGGATGGCATGTATGCCTACTCAA...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCCACAGAATCAAGAGATaGACATATTTTCTGAACTCT +
Preference number: 2 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPHRIKR*TYFLNS
Trigger: AGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTG...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGCAATATGTCCCTAAATaGTGCTATTTGGTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQQYVPK*CYLVCL
Trigger: CAGACAAACCAAATAGCACCATTTAGGGACATATTG...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR GCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTAAATCTGAATTTGAGTaGTCACCTCTGACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFKSEFE*SPLTRH
Trigger: GTGCCTGGTCAGAGGTGAGCACTCAAATTCAGATTT...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGCACAGAATCAAGAGATaGACATATTTTCTGAACTCT +
Preference number: 2 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQHRIKR*TYFLNS
Trigger: AGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTG...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCCACAGAATCAAGAGATaGACATATTTTCTGAACTCT +
Preference number: 2 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSHRIKR*TYFLNS
Trigger: AGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTG...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCAATATGTCCCTAAATaGTGCTATTTGGTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPQYVPK*CYLVCL
Trigger: CAGACAAACCAAATAGCACCATTTAGGGACATATTG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCACAGAATCAAGAGATaGACATATTTTCTGAACTCT +
Preference number: 2 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPHRIKR*TYFLNS
Trigger: AGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 90 bp TCTGAAGAAACACAAAGCTTTCTTCAGGTTAAACACTCTATTGTTTaGATGACTCTTCTGAATCTGTTGCCATCAGAAAGCTGTCTAGAT +
Preference number: 2 (lower is better)
Translates to: SEETQSFLQVKHSIV*MTLLNLLPSESCLD
Trigger: ATCTAGACAGCTTTCTGATGGCAACAGATTCAGAAGAGTCATCAAAACAATAGAGTGTTTAACCTGAAGAAAGCTTTGTGTTTCTTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CAA 90 bp AATCTGGATGAATATAATATGCTCAGTGATTATACAAAGACGATTTaGAGACTGGCGTGTTACCATTTGTACCGTATACAACAGAAGCAA +
Preference number: 2 (lower is better)
Translates to: NLDEYNMLSDYTKTI*RLACYHLYRIQQKQ
Trigger: TTGCTTCTGTTGTATACGGTACAAATGGTAACACGCCAGTCTCAAAATCGTCTTTGTATAATCACTGAGCATATTATATTCATCCAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 72 bp GGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTaGAAGGAGCCCTGGTTAGGAGACGCCCAGAGGCCG +
Preference number: 3 (lower is better)
Translates to: GHPSHVHGSHCF*KEPWLGDAQRP
Trigger: CGGCCTCTGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp CCTCGACCCAAAGTGGCTCACTGTATGGGTCAGAGGTaGGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAG +
Preference number: 3 (lower is better)
Translates to: PRPKVAHCMGQR*VSPLSAVTGSK
Trigger: CTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCACCTCTGACCCATACAGTGAGCCACTTTGGGTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 72 bp GGCATACATGCCATCCACTGTCAGCACTGCTGGGTCTaGCCTCCAGCGGGAATTCTCTCCATCTTCCTACAC +
Preference number: 3 (lower is better)
Translates to: GIHAIHCQHCWV*PPAGILSIFLH
Trigger: GTGTAGGAAGATGGAGAGAATTCCCGCTGGAGGGCAGACCCAGCAGTGCTGACAGTGGATGGCATGTATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTCAGAGCCTGCAACATaGAGGTTTCTGGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: GVGRACMCLEARGVGHFPSEPAT*RFLEAW
Trigger: CCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGA...AGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGCACAAGGGCTCTTCTaGCTCACAGACACCTTTCCC +
Preference number: 3 (lower is better)
Translates to: DRLVCGVGRACMCLEARGAQGLF*LTDTFP
Trigger: GGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGC...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 72 bp TCACTGTATGGGTCAGAGGTGCGTCTCTCCTTTGTCTaGGGTCACAGGCAGCAAGGCAGAAGACATGGCTTG +
Preference number: 3 (lower is better)
Translates to: SLYGSEVRLSFV*GHRQQGRRHGL
Trigger: CAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCACCTCTGACCCATACAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CCA 72 bp TTAACTCCCACCCTCGACCCAAAGTGGCTCACTGTATaGGTCAGAGGTGCGTCTCTCCTTTGTCTGCGGTCA +
Preference number: 3 (lower is better)
Translates to: LTPTLDPKWLTV*VRGASLLCLRS
Trigger: TGACCGCAGACAAAGGAGAGACGCACCTCTGACCCATACAGTGAGCCACTTTGGGTCGAGGGTGGGAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCCTCTTGATTCCTGATTaGATGATGTTCGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: RLITLTEGRPGGHMDSERLLIPD*MMFAPH
Trigger: GTGTGGAGCGAACATCATCAAATCAGGAATCAAGAG...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CCA 72 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATaGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGG +
Preference number: 3 (lower is better)
Translates to: CDLVVGPPIPRS*QPLLLKGALVR
Trigger: CCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTTGCCTGGTATTGTGTTaGCAGAGCCAGAGCACACCC +
Preference number: 3 (lower is better)
Translates to: GRACMCLEARGVGHFPLSCLVLC*QSQSTP
Trigger: GGGTGTGCTCTGGCTCTGCAAACACAATACCAGGCA...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 72 bp CAGACAGACAGATTGGTATGTGGAGTGGGGAGAGCATaGATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTT +
Preference number: 3 (lower is better)
Translates to: QTDRLVCGVGRA*MCLEARGVGHF
Trigger: AAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CCA 72 bp TACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTaGCTGAAACCCGGCTGTGCGTGTTGCCAATATGTC +
Preference number: 3 (lower is better)
Translates to: YSEPATLRFLEA*LKPGCACCQYV
Trigger: GACATATTGGCAACACGCACAGCCGGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CCA 72 bp CTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATaGCTTGTGGTATACATTGATCTGCTGCCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: LCLRSQAARQKT*LVVYIDLLPCG
Trigger: ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCGTTCATGGCAGCCATaGCTTTTGAAAGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGRSWQP*LLKGAL
Trigger: CAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACG...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTTCAGAGCCTGCAACATaGAGGTTTCTGGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGSEPAT*RFLEAW
Trigger: CCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGA...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGGCACAAGGGCTCTTCTaGCTCACAGACACCTTTCCC +
Preference number: 3 (lower is better)
Translates to: VCRARAHPGILYEEHVCVAQGLF*LTDTFP
Trigger: GGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGC...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp TTGCATTATGAGCAGATGTTCTTGAGTAGGCATACATaGCATCCACTGTCAGCACTGCTGGGTCTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: LHYEQMFLSRHT*HPLSALLGLPS
Trigger: GGAGGGCAGACCCAGCAGTGCTGACAGTGGATGGCATGTATGCCTACTCAAGAACATCTGCTCATAATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp ACGTATTTGTCTAGGCTCTTGCACAAGGGCTCTTCTTaGTCACAGACACCTTTCCCCCTTGGCTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: TYLSRLLHKGSS*SQTPFPLGSSS
Trigger: AGAAGAGGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAATACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTaGCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTA +
Preference number: 3 (lower is better)
Translates to: DRLVCGVGRACM*LEARGVGHFPL
Trigger: TAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCCGTTCATGGCAGCCATaGCTTTTGAAAGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPRSWQP*LLKGAL
Trigger: CAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACG...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTCAGAGCCTGCAACATaGAGGTTTCTGGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: VPRGQRSRSLSFICLILLSEPAT*RFLEAW
Trigger: CCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGTATTTGTCTAGGCTCTaGCACAAGGGCTCTTCTTGC +
Preference number: 3 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVYLSRL*HKGSSC
Trigger: GCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAATA...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCTATTTGTCTAGGCTCTaGCACAAGGGCTCTTCTTGC +
Preference number: 3 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLYLSRL*HKGSSC
Trigger: GCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAATA...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCTTGATTCCTGATTaGATGATGTTCGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGLLIPD*MMFAPH
Trigger: GTGTGGAGCGAACATCATCAAATCAGGAATCAAGAG...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCGCACAAGGGCTCTTCTaGCTCACAGACACCTTTCCC +
Preference number: 3 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILAQGLF*LTDTFP
Trigger: GGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGC...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp TTTCTGGAAGCCTGGCTGAAACCCGGCTGTGCGTGTTaGCAATATGTCCCTAAATGGTGCTATTTGGTTTGT +
Preference number: 3 (lower is better)
Translates to: FLEAWLKPGCAC*QYVPKWCYLVC
Trigger: ACAAACCAAATAGCACCATTTAGGGACATATTGGCAACACGCACAGCCGGGTTTCAGCCAGGCTTCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp CCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTaGCTTATTCTTCTGAGACAGGGTGTCTTACTGAGC +
Preference number: 3 (lower is better)
Translates to: PRGQRSRSLSFI*LILLRQGVLLS
Trigger: GCTCAGTAAGACACCCTGTCTCAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCCGTTCATGGCAGCCATaGCTTTTGAAAGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILRSWQP*LLKGAL
Trigger: CAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACG...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGATTCCACATTTTGTTGTaGTTTGAAGGAAAGACAGTG +
Preference number: 3 (lower is better)
Translates to: DRLVCGVGRACMCLEARGFHILL*FEGKTV
Trigger: CACTGTCTTTCCTTCAAACAACAACAAAATGTGGAA...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTACTCTTCTGAATCTGTaGCCATCAGAAAGCTGTCTA +
Preference number: 3 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGTLLNL*PSESCL
Trigger: TAGACAGCTTTCTGATGGCAACAGATTCAGAAGAGT...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCTCTTGATTCCTGATTaGATGATGTTCGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: VPRGQRSRSLSFICLILLLLIPD*MMFAPH
Trigger: GTGTGGAGCGAACATCATCAAATCAGGAATCAAGAG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTTCAGAGCCTGCAACATaGAGGTTTCTGGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIASEPAT*RFLEAW
Trigger: CCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGA...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTCTAGACAGATGACATaGCAAACATTACTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: VCRARAHPGILYEEHVCVSRQMT*QTLLRA
Trigger: GGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGA...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCGTTCATGGCAGCCATaGCTTTTGAAAGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPRSWQP*LLKGAL
Trigger: CAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGCTCTTGATTCCTGATTaGATGATGTTCGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQLLIPD*MMFAPH
Trigger: GTGTGGAGCGAACATCATCAAATCAGGAATCAAGAG...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTCTAGACAGATGACATaGCAAACATTACTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: VPRGQRSRSLSFICLILLSRQMT*QTLLRA
Trigger: GGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCTTCCACATTTTGTTGTaGTTTGAAGGAAAGACAGTG +
Preference number: 3 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLFHILL*FEGKTV
Trigger: CACTGTCTTTCCTTCAAACAACAACAAAATGTGGAA...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 72 bp AAGGAAAGACAGTGTGAAAGTGGTCTCTCAAGGTTATaGCTGGGGGTGCAGTTGTTCACACTAACAGCTAGA +
Preference number: 3 (lower is better)
Translates to: KERQCESGLSRL*LGVQLFTLTAR
Trigger: TCTAGCTGTTAGTGTGAACAACTGCACCCCCAGTCATAACCTTGAGAGACCACTTTCACACTGTCTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR GCA 72 bp TCTAGACAGATGACATTGCAAACATTACTCAGAGCCTaGAACATTGAGGTTTCTGGAAGCCTGGCTGAAACC +
Preference number: 3 (lower is better)
Translates to: SRQMTLQTLLRA*NIEVSGSLAET
Trigger: GGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACCGTTCATGGCAGCCATaGCTTTTGAAAGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNRSWQP*LLKGAL
Trigger: CAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACG...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTCTTGATTCCTGATTaGATGATGTTCGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSLLIPD*MMFAPH
Trigger: GTGTGGAGCGAACATCATCAAATCAGGAATCAAGAG...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGTCTAGACAGATGACATaGCAAACATTACTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQSRQMT*QTLLRA
Trigger: GGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGA...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR TCA 72 bp GGCATGTACCAGCACACCTGGCCCATACAGTGGTTTTaGAGGCACCGAATATATTGGTGTGTATTACAAAAA +
Preference number: 3 (lower is better)
Translates to: GMYQHTWPIQWF*RHRIYWCVLQK
Trigger: TTTTTGTAATACACACCAATATATTCGGTGCCTTCAAAACCACTGTATGGGCCAGGTGTGCTGGTACATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR GCA 72 bp AGCACACAGCGCTTATCTATTCAGTCAATCCTAGCCTaGTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTA +
Preference number: 3 (lower is better)
Translates to: STQRLSIQSILA*LILFPKEMQAL
Trigger: TAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGATAAGCGCTGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTCTCTTGATTCCTGATTaGATGATGTTCGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: QRGSRQMTLQTLLRACNILLIPD*MMFAPH
Trigger: GTGTGGAGCGAACATCATCAAATCAGGAATCAAGAG...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTCTAGACAGATGACATaGCAAACATTACTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSSRQMT*QTLLRA
Trigger: GGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTTCCACATTTTGTTGTaGTTTGAAGGAAAGACAGTG +
Preference number: 3 (lower is better)
Translates to: VPRGQRSRSLSFICLILLFHILL*FEGKTV
Trigger: CACTGTCTTTCCTTCAAACAACAACAAAATGTGGAA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 72 bp TTCCACATTTTGTTGTTGTTTGAAGGAAAGACAGTGTaGAAGTGGTCTCTCAAGGTTATGACTGGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: FHILLLFEGKTV*KWSLKVMTGGA
Trigger: TGCACCCCCAGTCATAACCTTGAGAGACCACTTTCACACTGTCTTTCCTTCAAACAACAACAAAATGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR-3UTR CAA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTTCTAGACAGATGACATaGCAAACATTACTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIASRQMT*QTLLRA
Trigger: GGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGA...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CCA 72 bp AAGCAAGCTGAGTTACTGGGATTAATCAGATTCAGATaGCCACCAAAGTGGATTTTGGGTGAGGAATTTCAT +
Preference number: 3 (lower is better)
Translates to: KQAELLGLIRFR*PPKWILGEEFH
Trigger: ATGAAATTCCTCACCCAAAATCCACTTTGGTGGCCATCTGAATCTGATTAATCCCAGTAACTCAGCTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 72 bp ATGAAGTCAGGAAGGAGTGGAAAACATTTTCTTGAATaGTTTAACCTCTCTCTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: MKSGRSGKHFLE*FNLSLCVCVCV
Trigger: CACACACACACACACACACAGAGAGAGGTTAAATCATTCAAGAAAATGTTTTCCACTCCTTCCTGACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CCA 72 bp GAGAGAGAGAGTATTGCCTGTACATTCATGGTTACATaGCACTTGAGTAAATTTCTAGTTTGTCCAGATAAA +
Preference number: 3 (lower is better)
Translates to: ERESIACTFMVT*HLSKFLVCPDK
Trigger: TTTATCTGGACAAACTAGAAATTTACTCAAGTGCCATGTAACCATGAATGTACAGGCAATACTCTCTCTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CCA 72 bp TTACTGGGATTAATCAGATTCAGATGGCCACCAAAGTaGATTTTGGGTGAGGAATTTCATAAAACAATAGAA +
Preference number: 3 (lower is better)
Translates to: LLGLIRFRWPPK*ILGEEFHKTIE
Trigger: TTCTATTGTTTTATGAAATTCCTCACCCAAAATCCACTTTGGTGGCCATCTGAATCTGATTAATCCCAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR TCA 72 bp AATATAATATGCTCAGTGATTATACAAAGACGATTTTaGGACTGGCGTGTTACCATTTGTACCGTATACAAC +
Preference number: 3 (lower is better)
Translates to: NIICSVIIQRRF*DWRVTICTVYN
Trigger: GTTGTATACGGTACAAATGGTAACACGCCAGTCTCAAAATCGTCTTTGTATAATCACTGAGCATATTATATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCCTTCTGCAGGGTAAGTaGCGCGTCCTCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERLLQGK*RVLAPL
Trigger: AAGGGGAGCGAGGACGCGCCACTTACCCTGCAGAAG...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp GGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTaGAAAGGAGCCCTGGTTAGGAGACGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPPIPRSWQPLL*KGALVRRRPEA
Trigger: GGCCTCTGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCAGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERTVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCTCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CTAGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGSCTRALLAHRHLSPLAAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...AGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: GVGRACMCLEARGVGHFPRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...AGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCATCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSEREEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: GVGRACMCLEARGVGHFPGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...AGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: DRLVCGVGRACMCLEARGSSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCACTGGACATGCCAAGGTaGATGGCATCCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPLDMPR*MASIFG
Trigger: TCCAAAGATGGATGCCATTCACCTTGGCATGTCCAG...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRACMCLEARGVGHFPLSAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCAACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPTVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCATGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCAGTGGGGCACTGGACATaGCAAGGTGAATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPVGHWT*QGEWHP
Trigger: TGGATGCCATTCACCTTGGCATGTCCAGTGCCCCAC...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLSSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCGGGGTCTGTGGGCCTTaGGTCCAACCCCGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: GSSSLCHELQTAASNADFGVCGP*VQPRWY
Trigger: ATACCAACGGGGTTGGACTCAAGGCCCACAGACCCC...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCATGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCACTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCATTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGSSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVSSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTCTGGACATGCCAAGGTaGATGGCATCCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACLDMPR*MASIFG
Trigger: TCCAAAGATGGATGCCATTCACCTTGGCATGTCCAG...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGTVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCCTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGATTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DRLVCGVGRACMCLEARGLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGCTTCTGCAGGGTAAGTaGCGCGTCCTCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLLLQGK*RVLAPL
Trigger: AAGGGGAGCGAGGACGCGCCACTTACCCTGCAGAAG...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTAAGAGGAAGATAGCATaGGGACACTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GVGRACMCLEARGVGHFPKRKIA*GHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTT...AGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCAAGAGGAAGATAGCATaGGGACACTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSKRKIA*GHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTT...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCACTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPLMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVTVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGATTCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ACSAIRTKGKMATNVCVIPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...AATCACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCTCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERSAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCACTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGGTGGGGCACTGGACATaGCAAGGTGAATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVVGHWT*QGEWHP
Trigger: TGGATGCCATTCACCTTGGCATGTCCAGTGCCCCAC...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCTCGCTTTTTGGGTCTTaGAATTTTAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: RLITLTEGRPGGHMDSERSLFGS*NFSQKG
Trigger: ACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGA...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRACMCLEARGVGHFPLSFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPSSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTCTGGACATGCCAAGGTaGATGGCATCCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GRACMCLEARGVGHFPLSLDMPR*MASIFG
Trigger: TCCAAAGATGGATGCCATTCACCTTGGCATGTCCAG...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GSSSLCHELQTAASNADFVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VLKQCYEQIANYASDLSHRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGGTGGGGCACTGGACATaGCAAGGTGAATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLVGHWT*QGEWHP
Trigger: TGGATGCCATTCACCTTGGCATGTCCAGTGCCCCAC...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCCTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLLMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSSSLCHELQTAASNADFFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGTGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCTGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCACTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACGTGGGGCACTGGACATaGCAAGGTGAATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VLKQCYEQIANYASDLSHVGHWT*QGEWHP
Trigger: TGGATGCCATTCACCTTGGCATGTCCAGTGCCCCAC...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLCSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGATTTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ACSAIRTKGKMATNVCVISLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...AATCACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTCTTCTGCAGGGTAAGTaGCGCGTCCTCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: QRGSRQMTLQTLLRACNILLQGK*RVLAPL
Trigger: AAGGGGAGCGAGGACGCGCCACTTACCCTGCAGAAG...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACTCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VLKQCYEQIANYASDLSHSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGCTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVLMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSSSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TCTATTCAGTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: SIQSILACLILFPKEMQASSRSL*SSCLYC
Trigger: ACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCT...CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp AGGCAGCAAGGCAGAAGACATGGCTTGTGGTATACATaGATCTGCTGCCCTGTGGTCTCCCAAATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RQQGRRHGLWYT*ICCPVVSQMKN
Trigger: GTTCTTCATTTGGGAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCCTGGACATGCCAAGGTaGATGGCATCCATCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPLDMPR*MASIFG
Trigger: TCCAAAGATGGATGCCATTCACCTTGGCATGTCCAG...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSTVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACTGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VLKQCYEQIANYASDLSHCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TCTATTCAGTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SIQSILACLILFPKEMQAPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGATCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: DRLVCGVGRACMCLEARGSAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCACGTTCATGGCAGCCATTGCTTTTGAAAGGAGCCCTGGTTAGGAGACGCCCATCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: PRSWQPLLLKGALVRRRPSAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...TGGGCGTCTCCTAACCAGGGCTCCTTTCAAAAGCAATGGCTGCCATGAACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTTCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACSAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCGTGGGGCACTGGACATaGCAAGGTGAATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSVGHWT*QGEWHP
Trigger: TGGATGCCATTCACCTTGGCATGTCCAGTGCCCCAC...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSSSLCHELQTAASNADFQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCTCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGAAGAGGAAGATAGCATaGGGACACTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVKRKIA*GHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTT...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCAAGAGGAAGATAGCATaGGGACACTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GSSSLCHELQTAASNADFKRKIA*GHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTT...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGCTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLLMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
3UTR CAA 72 bp TTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATaGTGTTTGCAGAGCCAGAGCACACCCTGGCATATT +
Preference number: 4 (lower is better)
Translates to: FLSVTSDPTCLV*CLQSQSTPWHI
Trigger: AATATGCCAGGGTGTGCTCTGGCTCTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACGCCCACTCTTTGACATaGCTCGGGGTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNAHSLT*LGVCGP
Trigger: AGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGC...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QRGSRQMTLQTLLRACNITVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CGTGTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVANMSLNGAIWFVCEGHPESWH*IRRLFL
Trigger: GAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGG...ATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGATTTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: ACSAIRTKGKMATNVCVICSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...AATCACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTCTTCTGCAGGGTAAGTaGCGCGTCCTCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFLLQGK*RVLAPL
Trigger: AAGGGGAGCGAGGACGCGCCACTTACCCTGCAGAAG...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGATCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTTGCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: VCRARAHPGILYEEHVCVNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...CACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPTVPTL*HDSGSV
Trigger: CACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGT...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGATGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAGTTCTCCCTCTTTGGTaGCGTGTGTCTGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGVLPLW*RVSAGV
Trigger: AACTCCTGCAGACACACGTCACCAAAGAGGGAGAAC...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTAGGTCATGGGCAGGATaGGGAAGGGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFRSWAG*GRDSRK
Trigger: CTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACCT...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCTCTCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: ARQKTWLVVYIDLLPCGLSAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...GAGACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGATTCTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: ACSAIRTKGKMATNVCVILICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...AATCACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: VPRGQRSRSLSFICLILLHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCCSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLCSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VLKQCYEQIANYASDLSHLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp AAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGAAACCCAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: KHYSEPATLRFLEAWLKPNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...GGGTTTCAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRGSRQMTLQTLLRACNIEEEST*NLTVAW
Trigger: CCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTC...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp TATTGTGTTTGCAGAGCCAGAGCACACCCTGGCATATaGTATGAGGAACATGTGTGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YCVCRARAHPGI*YEEHVCVCVCV
Trigger: CACACACACACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGCAAACACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CGTGTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTGGTGACGTGTGTCTaGAGGAGTTTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RVANMSLNGAIWFVCEGHLVTCV*RSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAA...ATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTTCACCAGTGGGGCACTaGACATGCCAAGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVSPVGH*TCQGEW
Trigger: CCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGA...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAG +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFGMLHQ*GTGHAK
Trigger: CTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACC...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCAAGAGGAAGATAGCATaGGGACACTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSKRKIA*GHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTCTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: QRGSRQMTLQTLLRACNILMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPFSFRF*GVRSRR
Trigger: CCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAA...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp GTAACACTGAGTTGTACTACGTATTTGTCTAGGCTCTaGCACAAGGGCTCTTCTTGCTCACAGACACCTTTC +
Preference number: 4 (lower is better)
Translates to: VTLSCTTYLSRL*HKGSSCSQTPF
Trigger: GAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAGACAAATACGTAGTACAACTCAGTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTTGTTGGCCACCTGGATaGCCAGGCATAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVCWPPG*PGIAFH
Trigger: ATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACA...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CGTGTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RVANMSLNGAIWFVCEGHQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...ATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTTCGCTTTTTGGGTCTTaGAATTTTAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCSLFGS*NFSQKG
Trigger: ACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGA...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSCSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTACATGCCAAGGTGAATaGCATCCATCTTTGGACCAC +
Preference number: 4 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIATCQGE*HPSLDH
Trigger: GTGGTCCAAAGATGGATGCCATTCACCTTGGCATGT...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPLMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp AGGCATGTACCAGCACACCTGGCCCATACAGTGGTTTaGAAGGCACCGAATATATTGGTGTGTATTACAAAA +
Preference number: 4 (lower is better)
Translates to: RHVPAHLAHTVV*KAPNILVCITK
Trigger: TTTTGTAATACACACCAATATATTCGGTGCCTTCAAAACCACTGTATGGGCCAGGTGTGCTGGTACATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACTGGCAGCAAATAGGGTaGGCTTGTATCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNWQQIG*ACIATS
Trigger: TGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCA...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCCTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: QRGSRQMTLQTLLRACNICSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIACSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTTCCCTCTGGTCCTCTTaGCTGTACTGTTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFSLWSS*LYCSSS
Trigger: GCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGA...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTCTCATGTTGGCCACCTaGATGACCAGGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFLMLAT*MTRHSF
Trigger: AAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QRGSRQMTLQTLLRACNINLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSSAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp TCTATTCAGTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: SIQSILACLILFPKEMQASAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGACTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTCAAGGAAAAGAGGAATaGTCCTGTGAGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFQGKEE*SCERVH
Trigger: GTGGACTCTCTCACAGGAGCATTCCTCTTTTCCTTG...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp TCTATTCAGTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTCGCTTTTTGGGTCTTaGAATTTTAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SIQSILACLILFPKEMQASLFGS*NFSQKG
Trigger: ACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGA...CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACAAGAGGAAGATAGCATaGGGACACTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNKRKIA*GHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTT...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFLMTAQ*LNLMVS
Trigger: CGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAG...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTTCTGCTCAAATTGACTaGAATCAGCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIASAQID*NQPHTF
Trigger: GAAAGTATGTGGCTGATTTCAGTCAATTTGAGCAGA...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTTCGCTTTTTGGGTCTTaGAATTTTAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIASLFGS*NFSQKG
Trigger: ACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGA...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFHSFPF*LLMTAQ
Trigger: CTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTTGTTCTTCAAGCTTCTaGTTCTCAGAATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVCSSSF*FSESAQ
Trigger: CTGTGCCGATTCTGAGAAGCAGAAGCTTGAAGAACA...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CCA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTAATTTGACAGTGGCCTaGTTGAGGAGAATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVNLTVA*LRRMRS
Trigger: AGAACGCATTCTCCTCAACCAGGCCACTGTCAAATT...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR TCA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACCTGATCTGCTCAAATTaGCTGAAATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNLICSN*LKSATY
Trigger: GTATGTGGCTGATTTCAGTCAATTTGAGCAGATCAG...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCTCGCTTTTTGGGTCTTaGAATTTTAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPSLFGS*NFSQKG
Trigger: ACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGA...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR GCA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTTCGCTTTTTGGGTCTTaGAATTTTAGCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFSLFGS*NFSQKG
Trigger: ACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGA...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp CCACAGAATCAAGAGATGGACATATTTTCTGAACTCTaGATTCCTGATTTGATGATGTTCGCTCCACACAAT +
Preference number: 4 (lower is better)
Translates to: PQNQEMDIFSEL*IPDLMMFAPHN
Trigger: ATTGTGTGGAGCGAACATCATCAAATCAGGAATCAAGAGTTCAGAAAATATGTCCATCTCTTGATTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
3UTR CAA 72 bp ATTTTTCTTAAAGAATCAGATAAGCATGAGGATAACTaGGTAGACTTTCTTAGTGTGACCTCTGATCCCACA +
Preference number: 4 (lower is better)
Translates to: IFLKESDKHEDN*VDFLSVTSDPT
Trigger: TGTGGGATCAGAGGTCACACTAAGAAAGTCTACCAAGTTATCCTCATGCTTATCTGATTCTTTAAGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: RLITLTEGRPGGHMDSERESTWN*TVAWLR
Trigger: CCTCAACCAGGCCACTGTCAAATTCCACGTGGACTC...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 90 bp GGGTCTGTGGGCCTTGAGTCCAACCCCGTTGGTATGCTTCACCAGTaGGGCACTGGACATGCCAAGGTGAATGGCATCCATCTTTGGACC +
Preference number: 5 (lower is better)
Translates to: GSVGLESNPVGMLHQ*GTGHAKVNGIHLWT
Trigger: GGTCCAAAGATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACCAACGGGGTTGGACTCAAGGCCCACAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
CDS-3UTR CAA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCAAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCATTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPLTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCGAATGGCATCCATCTTaGGACCACTCTGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: RLITLTEGRPGGHMDSEREWHPS*DHSVGQ
Trigger: CTGACCTACAGAGTGGTCCAAAGATGGATGCCATTC...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 90 bp GTCATGGGCAGGATGAGGAAGGGACTCTCGGAAGAGGAGTCCACGTaGAATTTGACAGTGGCCTGGTTGAGGAGAATGCGTTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VMGRMRKGLSEEEST*NLTVAWLRRMRSPS
Trigger: AGAGGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTCCGAGAGTCCCTTCCTCATCCTGCCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 90 bp GCGTTGAGAAGTACCACCAGCTCAAACTCCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGGGGGCTTGTCTCATCCAACACGTGG +
Preference number: 5 (lower is better)
Translates to: ALRSTTSSNSFSFRF*GVRSRRGLVSSNTW
Trigger: CCACGTGTTGGATGAGACAAGCCCCCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAAGGAGTTTGAGCTGGTGGTACTTCTCAACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CGACTGATAACGCTGACAGAGGGCAGACCTGGAGGGCACATGGACTCGGAACGCATGCAGGGTGTGTGGTaGGAATTAGATTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: RLITLTEGRPGGHMDSERMQGVW*ELDSPS
Trigger: ACTTGGGGAATCTAATTCCAACCACACACCCTGCAT...GCGTTCCGAGTCCATGTGCCCTCCAGGTCTGCCCTCTGTCAGCGTTATCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GACAGATTGGTATGTGGAGTGGGGAGAGCATGCATGTGCCTAGAGGCCAGAGGATTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: DRLVCGVGRACMCLEARGLTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...TCCTCTGGCCTCTAGGCACATGCATGCTCTCCCCACTCCACATACCAATCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CTAGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTTTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LGSCTRALLAHRHLSPLALTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...AGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACESTWN*TVAWLR
Trigger: CCTCAACCAGGCCACTGTCAAATTCCACGTGGACTC...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp AGGCTCTTGCACAAGGGCTCTTCTTGCTCACAGACACCTTTCCCCCTTGGCTCCCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: RLLHKGSSCSQTPFPLGSPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...GGAGCCAAGGGGGAAAGGTGTCTGTGAGCAAGAAGAGCCCTTGTGCAAGAGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS TCA 90 bp ACCCCGTTGGTATGCTTCACCAGTGGGGCACTGGACATGCCAAGGTaGATGGCATCCATCTTTGGACCACTCTGTAGGTCAGGAATCTTC +
Preference number: 5 (lower is better)
Translates to: TPLVCFTSGALDMPR*MASIFGPLCRSGIF
Trigger: GAAGATTCCTGACCTACAGAGTGGTCCAAAGATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACCAACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
ENSMUST00000140222.8
CDS TCA 90 bp TCTTTGGTGACGTGTGTCTGCAGGAGTTTTCCAGAGAGCTGGCACTaGATCAGGAGACTCTTCCTCATGTTGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: SLVTCVCRSFPESWH*IRRLFLMLATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCTCCTGATTCAGTGCCAGCTCTCTGGAAAACTCCTGCAGACACACGTCACCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGTTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVLTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS TCA 90 bp GATTCCGTCTACCTTATCGATTCTCACATTACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTGGGCCTTGAGTCCAACCCCGTTGGT +
Preference number: 5 (lower is better)
Translates to: DSVYLIDSHITVPTL*HDSGSVGLESNPVG
Trigger: ACCAACGGGGTTGGACTCAAGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGTAATGTGAGAATCGATAAGGTAGACGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
CDS-3UTR CAA 90 bp TGCGTCTCTCCTTTGTCTGCGGTCACAGGCAGCAAGGCAGAAGACATGGCTTGTATGCAGGGTGTGTGGTaGGAATTAGATTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: CVSPLSAVTGSKAEDMACMQGVW*ELDSPS
Trigger: ACTTGGGGAATCTAATTCCAACCACACACCCTGCAT...ACAAGCCATGTCTTCTGCCTTGCTGCCTGTGACCGCAGACAAAGGAGAGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGATTGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ACSAIRTKGKMATNVCVIESTWN*TVAWLR
Trigger: CCTCAACCAGGCCACTGTCAAATTCCACGTGGACTC...AATCACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGGGAAGATGGCCACGAACGTCTGTGTGATTTGGTAGTGGGGCCACCCATCCCACCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: GEDGHERLCDLVVGPPIPPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...TGGGATGGGTGGCCCCACTACCAAATCACACAGACGTTCGTGGCCATCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GRACMCLEARGVGHFPLSLPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVLPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS GCA 90 bp TTCCTCATGTTGGCCACCTGGATGACCAGGCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAGTGGCTGAACTTAATGGTCTCGGCT +
Preference number: 5 (lower is better)
Translates to: FLMLATWMTRHSFPF*LLMTAQWLNLMVSA
Trigger: AGCCGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GCAGAGCCAGAGCACACCCTGGCATATTGTATGAGGAACATGTGTGTGTGTGTGGAATGGCATCCATCTTaGGACCACTCTGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: AEPEHTLAYCMRNMCVCVEWHPS*DHSVGQ
Trigger: CTGACCTACAGAGTGGTCCAAAGATGGATGCCATTC...CACACACACACACATGTTCCTCATACAATATGCCAGGGTGTGCTCTGGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGGAGAGCATGCATGTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GRACMCLEARGVGHFPLSPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...AGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCACATGCATGCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GCAGCAAGGCAGAAGACATGGCTTGTGGTATACATTGATCTGCTGCCCTGTGGTCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: AARQKTWLVVYIDLLPCGPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...ACCACAGGGCAGCAGATCAATGTATACCACAAGCCATGTCTTCTGCCTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000037154.14
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: VPRGQRSRSLSFICLILLRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCCTGGCTGTTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: HCKHYSEPATLRFLEAWLLTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...CAGCCAGGCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GSSSLCHELQTAASNADFLPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGCTCCTCTTCTCTGTGTCATGAGCTGCAAACTGCAGCATCTAATGCAGACTTCCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GSSSLCHELQTAASNADFPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...GAAGTCTGCATTAGATGCTGCAGTTTGCAGCTCATGACACAGAGAAGAGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTGATTCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: ACSAIRTKGKMATNVCVIPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...AATCACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 90 bp AAGGTCCCCGTAATGAAGATCTCAATCAATGTGGTGATGACCAGTTaGGCGACTAAGAGGAAGATAGCATGGGGACACTCCTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: KVPVMKISINVVMTS*ATKRKIAWGHSSVM
Trigger: CATCACAGAGGAGTGTCCCCATGCTATCTTCCTCTTAGTCGCCCAACTGGTCATCACCACATTGATTGAGATCTTCATTACGGGGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTGCCTAGAGGCCAGAGGAGTAGGTCACTTTCCTTTATCTGCCTTATTCTTCTGCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: VPRGQRSRSLSFICLILLPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...CAGAAGAATAAGGCAGATAAAGGAAAGTGACCTACTCCTCTGGCCTCTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCTTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSLTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGACATACTTTCCATTTTaGGAGAGAGAAACCACAGGC +
Preference number: 5 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLTYFPF*ERETTG
Trigger: GCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGT...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp TGTGATTTGGTAGTGGGGCCACCCATCCCACGTTCATGGCAGCCATTGCTTTTGCCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: CDLVVGPPIPRSWQPLLLPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...CAAAAGCAATGGCTGCCATGAACGTGGGATGGGTGGCCCCACTACCAAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQLPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 90 bp ATGACCAGGCATAGCTTTCCATTCTGCTTGCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCGGCTCGCTTTTTGGGTCTTGCAATT +
Preference number: 5 (lower is better)
Translates to: MTRHSFPFCLLMTAQ*LNLMVSARFLGLAI
Trigger: AATTGCAAGACCCAAAAAGCGAGCCGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATGCCTGGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGGAATGGCATCCATCTTaGGACCACTCTGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQEWHPS*DHSVGQ
Trigger: CTGACCTACAGAGTGGTCCAAAGATGGATGCCATTC...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTTCTTAAGCAGTGCTATGAGCAAATAGCAAATTACGCCTCAGACCTCAGCCACGAATGGCATCCATCTTaGGACCACTCTGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VLKQCYEQIANYASDLSHEWHPS*DHSVGQ
Trigger: CTGACCTACAGAGTGGTCCAAAGATGGATGCCATTC...GTGGCTGAGGTCTGAGGCGTAATTTGCTATTTGCTCATAGCACTGCTTAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTATGCAGGGTGTGTGGTaGGAATTAGATTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCMQGVW*ELDSPS
Trigger: ACTTGGGGAATCTAATTCCAACCACACACCCTGCAT...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CTGTACAATTTCTTTGTGGCTAAGGTATGTTCCCAGGGAAAAGCTGAGATAGCTAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: LYNFFVAKVCSQGKAEIARLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...AGCTATCTCAGCTTTTCCCTGGGAACATACCTTAGCCACAAAGAAATTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTTTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: QRGSRQMTLQTLLRACNILTVAW*RRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAA...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGESTWN*TVAWLR
Trigger: CCTCAACCAGGCCACTGTCAAATTCCACGTGGACTC...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGTTATACTCCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VNPSLLNSLSQGNAGVILLPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...GAGTATAACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCGCAAATAGGGTGAGCTaGTATCGCCACTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSANRVS*YRHFMS
Trigger: CGACATGAAGTGGCGATACAAGCTCACCCTATTTGC...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: QRGSRQMTLQTLLRACNILPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGAAGCATGCAGGGTGTGTGGTaGGAATTAGATTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: QMTLQTLLRACNIEVSGSMQGVW*ELDSPS
Trigger: ACTTGGGGAATCTAATTCCAACCACACACCCTGCAT...GCTTCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CAACGTGGATCTAGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTCCCCGTAGCCAATGGTaGTCTGAGATTCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: QRGSRQMTLQTLLRACNIPRSQW*SEIPRK
Trigger: TTTCCTTGGAATCTCAGACAACCATTGGCTACGGGG...AATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCTAGATCCACGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACAGACTCTTCCTCATGTaGGCCACCTGGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNRLFLM*ATWMTR
Trigger: CCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCT...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNESTWN*TVAWLR
Trigger: CCTCAACCAGGCCACTGTCAAATTCCACGTGGACTC...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFESTWN*TVAWLR
Trigger: CCTCAACCAGGCCACTGTCAAATTCCACGTGGACTC...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp AAATGCTTGTTCAGCCATCAGAACAAAGGGGAAGATGGCCACGAACGTCTGTGTACATACTTTCCATTTTaGGAGAGAGAAACCACAGGC +
Preference number: 5 (lower is better)
Translates to: KCLFSHQNKGEDGHERLCTYFPF*ERETTG
Trigger: GCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGT...ACACAGACGTTCGTGGCCATCTTCCCCTTTGTTCTGATGGCTGAACAAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTAGACTTTCTTAGTGTGACCTCTGATCCCACATGCCTGGTATTGTGTTTGCAGCCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: VDFLSVTSDPTCLVLCLQPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...CTGCAAACACAATACCAGGCATGTGGGATCAGAGGTCACACTAAGAAAGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFLPLVL*PVLFFK
Trigger: CTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAG...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCATGCAGGGTGTGTGGTaGGAATTAGATTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPMQGVW*ELDSPS
Trigger: ACTTGGGGAATCTAATTCCAACCACACACCCTGCAT...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp TCTATTCAGTCAATCCTAGCCTGCTTAATTCTCTTTCCCAAGGAAATGCAGGCGACATACTTTCCATTTTaGGAGAGAGAAACCACAGGC +
Preference number: 5 (lower is better)
Translates to: SIQSILACLILFPKEMQATYFPF*ERETTG
Trigger: GCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGT...CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCTATTTGTGACACAGTTTCAGTTTTCTTTTGTGGTGACTGCCGTCTTCAGTCCCCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: PICDTVSVFFCGDCRLQSPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...GGACTGAAGACGGCAGTCACCACAAAAGAAAACTGAAACTGTGTCACAAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCAGCCATCAGAACATGCAGGGTGTGTGGTaGGAATTAGATTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GTLKTSFYIQKCLFSHQNMQGVW*ELDSPS
Trigger: ACTTGGGGAATCTAATTCCAACCACACACCCTGCAT...GTTCTGATGGCTGAACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp AGACAGATGACATTGCAAACATTACTCAGAGCCTGCAACATTGAGGTTTCTGGACCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: RQMTLQTLLRACNIEVSGPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...TCCAGAAACCTCAATGTTGCAGGCTCTGAGTAATGTTTGCAATGTCATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CGTGTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATCCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: RVANMSLNGAIWFVCEGHPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...ATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAACACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCACATACTTTCCATTTTaGGAGAGAGAAACCACAGGC +
Preference number: 5 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPTYFPF*ERETTG
Trigger: GCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGT...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp CCAAGGAAATGCAGGCGTTATACTCCTATATTTCTCAGAGGTAAAATGTTACCCCCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: PRKCRRYTPIFLRGKMLPPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...GGGTAACATTTTACCTCTGAGAAATATAGGAGTATAACGCCTGCATTTCCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTACATACTTTCCATTTTaGGAGAGAGAAACCACAGGC +
Preference number: 5 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVTYFPF*ERETTG
Trigger: GCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGT...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp GTTGCCAATATGTCCCTAAATGGTGCTATTTGGTTTGTCTGTGAAGGACATTTTACATACTTTCCATTTTaGGAGAGAGAAACCACAGGC +
Preference number: 5 (lower is better)
Translates to: VANMSLNGAIWFVCEGHFTYFPF*ERETTG
Trigger: GCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTATGT...AAAATGTCCTTCACAGACAAACCAAATAGCACCATTTAGGGACATATTGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS-3UTR CAA 90 bp TCACCTCTGACCAGGCACTCTGAAGACATCTTTTTATATTCAGAAATGCTTGTTCCTGATCTGCTCAAATaGACTGAAATCAGCCACATA +
Preference number: 5 (lower is better)
Translates to: SPLTRHSEDIFLYSEMLVPDLLK*TEISHI
Trigger: TATGTGGCTGATTTCAGTCAATTTGAGCAGATCAGG...AACAAGCATTTCTGAATATAAAAAGATGTCTTCAGAGTGCCTGGTCAGAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 72 bp TGCTGTAGCAGGAGGCTCCTCAGCTCCCGCTCCCTCTaGTCCTCTTGCCTGTACTGTTCTTCAAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CCSRRLLSSRSL*SSCLYCSSSFC
Trigger: GCAGAAGCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCTGAGGAGCCTCCTGCTACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 72 bp TGCCCACTCTTTGACATGACTCGGGGTCTGTGGGCCTaGAGTCCAACCCCGTTGGTATGCTTCACCAGTGGG +
Preference number: 6 (lower is better)
Translates to: CPLFDMTRGLWA*SPTPLVCFTSG
Trigger: CCCACTGGTGAAGCATACCAACGGGGTTGGACTCAAGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
CDS CAA 90 bp GACGTTCGGCTCTGGCAGACGGCGCTGGTAGACTCCACCGTGGCGTaGAGAAGTACCACCAGCTCAAACTCCTTCTCCTTTAGGTTTTGG +
Preference number: 6 (lower is better)
Translates to: DVRLWQTALVDSTVA*RSTTSSNSFSFRFW
Trigger: CCAAAACCTAAAGGAGAAGGAGTTTGAGCTGGTGGTACTTCTCAACGCCACGGTGGAGTCTACCAGCGCCGTCTGCCAGAGCCGAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS GCA 72 bp TCCATCTTTGGACCACTCTGTAGGTCAGGAATCTTCTaGAGGGTAAGTGGCGCGTCCTCGCTCCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SIFGPLCRSGIF*RVSGASSLPFS
Trigger: GGAGAAGGGGAGCGAGGACGCGCCACTTACCCTGCAGAAGATTCCTGACCTACAGAGTGGTCCAAAGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
ENSMUST00000140222.8
CDS CAA 72 bp CTCTGGCAGACGGCGCTGGTAGACTCCACCGTGGCGTaGAGAAGTACCACCAGCTCAAACTCCTTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: LWQTALVDSTVA*RSTTSSNSFSF
Trigger: AAAGGAGAAGGAGTTTGAGCTGGTGGTACTTCTCAACGCCACGGTGGAGTCTACCAGCGCCGTCTGCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 72 bp CAGGAGGCTCCTCAGCTCCCGCTCCCTCTGGTCCTCTaGCCTGTACTGTTCTTCAAGCTTCTGCTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: QEAPQLPLPLVL*PVLFFKLLLLR
Trigger: TCTGAGAAGCAGAAGCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCTGAGGAGCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 90 bp GGACTCTCGGAAGAGGAGTCCACGTGGAATTTGACAGTGGCCTGGTaGAGGAGAATGCGTTCTCCCTCTTTGGTGACGTGTGTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLSEEESTWNLTVAW*RRMRSPSLVTCVCR
Trigger: CCTGCAGACACACGTCACCAAAGAGGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTCCGAGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 90 bp GGCAGGATGAGGAAGGGACTCTCGGAAGAGGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGGAGAATGCGTTCTCCCTCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: GRMRKGLSEEESTWN*TVAWLRRMRSPSLV
Trigger: CACCAAAGAGGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTCCGAGAGTCCCTTCCTCATCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS GCA 72 bp CCCCGTTGGTATGCTTCACCAGTGGGGCACTGGACATaGCAAGGTGAATGGCATCCATCTTTGGACCACTCT +
Preference number: 6 (lower is better)
Translates to: PRWYASPVGHWT*QGEWHPSLDHS
Trigger: AGAGTGGTCCAAAGATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACCAACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
ENSMUST00000140222.8
CDS CCA 72 bp GTCCAACCCCGTTGGTATGCTTCACCAGTGGGGCACTaGACATGCCAAGGTGAATGGCATCCATCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: VQPRWYASPVGH*TCQGEWHPSLD
Trigger: GTCCAAAGATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACCAACGGGGTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
ENSMUST00000140222.8
CDS CCA 72 bp TTACTGTGCCCACTCTTTGACATGACTCGGGGTCTGTaGGCCTTGAGTCCAACCCCGTTGGTATGCTTCACC +
Preference number: 6 (lower is better)
Translates to: LLCPLFDMTRGL*ALSPTPLVCFT
Trigger: GGTGAAGCATACCAACGGGGTTGGACTCAAGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
CDS CCA 72 bp AGTACCACCAGCTCAAACTCCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCCCGCAGGGGGCTTGTCTCATCC +
Preference number: 6 (lower is better)
Translates to: STTSSNSFSFRF*GVRSRRGLVSS
Trigger: GGATGAGACAAGCCCCCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAAGGAGTTTGAGCTGGTGGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 72 bp AGGAAGGGACTCTCGGAAGAGGAGTCCACGTGGAATTaGACAGTGGCCTGGTTGAGGAGAATGCGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: RKGLSEEESTWN*TVAWLRRMRSP
Trigger: GGGAGAACGCATTCTCCTCAACCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTCCGAGAGTCCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 72 bp ACAGTGGCCTGGTTGAGGAGAATGCGTTCTCCCTCTTaGGTGACGTGTGTCTGCAGGAGTTTTCCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: TVAWLRRMRSPS*VTCVCRSFPES
Trigger: GCTCTCTGGAAAACTCCTGCAGACACACGTCACCAAAGAGGGAGAACGCATTCTCCTCAACCAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CAA 90 bp CTCATGTTGGCCACCTGGATGACCAGGCATAGCTTTCCATTCTGCTaGCTGATGACAGCACAGTGGCTGAACTTAATGGTCTCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: LMLATWMTRHSFPFC*LMTAQWLNLMVSAR
Trigger: GCGAGCCGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS TCA 72 bp GTATGCTTCACCAGTGGGGCACTGGACATGCCAAGGTaGATGGCATCCATCTTTGGACCACTCTGTAGGTCA +
Preference number: 6 (lower is better)
Translates to: VCFTSGALDMPR*MASIFGPLCRS
Trigger: TGACCTACAGAGTGGTCCAAAGATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000037154.14
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
ENSMUST00000140222.8
CDS CAA 72 bp CAGGTCATCACAAAGGTGGCAGCAAATAGGGTGAGCTaGTATCGCCACTTCATGTCGATGACGGTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: QVITKVAANRVS*YRHFMSMTVVH
Trigger: GTGGACAACCGTCATCGACATGAAGTGGCGATACAAGCTCACCCTATTTGCTGCCACCTTTGTGATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
CDS TCA 72 bp TACCTTATCGATTCTCACATTACTGTGCCCACTCTTTaGCATGACTCGGGGTCTGTGGGCCTTGAGTCCAAC +
Preference number: 6 (lower is better)
Translates to: YLIDSHITVPTL*HDSGSVGLESN
Trigger: GTTGGACTCAAGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGTAATGTGAGAATCGATAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8
CDS GCA 72 bp TTGGCCACCTGGATGACCAGGCATAGCTTTCCATTCTaGTTGCTGATGACAGCACAGTGGCTGAACTTAATG +
Preference number: 6 (lower is better)
Translates to: LATWMTRHSFPF*LLMTAQWLNLM
Trigger: CATTAAGTTCAGCCACTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 72 bp CATAGCTTTCCATTCTGCTTGCTGATGACAGCACAGTaGCTGAACTTAATGGTCTCGGCTCGCTTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: HSFPFCLLMTAQ*LNLMVSARFLG
Trigger: ACCCAAAAAGCGAGCCGAGACCATTAAGTTCAGCCACTGTGCTGTCATCAGCAAGCAGAATGGAAAGCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 72 bp GTAATGAAGATCTCAATCAATGTGGTGATGACCAGTTaGGCGACTAAGAGGAAGATAGCATGGGGACACTCC +
Preference number: 6 (lower is better)
Translates to: VMKISINVVMTS*ATKRKIAWGHS
Trigger: GGAGTGTCCCCATGCTATCTTCCTCTTAGTCGCCCAACTGGTCATCACCACATTGATTGAGATCTTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
CDS CCA 72 bp CCTGTGAGAGAGTCCACTTTCATAATGCAGGGTGTGTaGTTGGAATTAGATTCCCCAAGTTGTAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: PVRESTFIMQGV*LELDSPSCKSP
Trigger: TGGTGACTTACAACTTGGGGAATCTAATTCCAACCACACACCCTGCATTATGAAAGTGGACTCTCTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000037154.14
ENSMUST00000113854.8
ENSMUST00000113855.8
ENSMUST00000113856.8
ENSMUST00000113858.3
ENSMUST00000113859.8
ENSMUST00000113861.8
ENSMUST00000113862.8
ENSMUST00000134166.8